Pregenerated sensors for SUCLG2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061838Ensembl transcript IDs: ENSMUST00000079847.8, ENSMUST00000204224.3, ENSMUST00000204567.2
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGGGCTTTCTTAATGTACTGGAATTAGGGGCCAGTGGAGGCCACTaGTCACAGAAGCTCAGGTGTCTTAGCTGTACCCTTCTGGAAGCC | + |
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Preference number: 1 (lower is better) Translates to: MGFLNVLELGASGGH*SQKLRCLSCTLLEA Trigger: GGCTTCCAGAAGGGTACAGCTAAGACACCTGAGCTTCTGTGACCAGTGGCCTCCACTGGCCCCTAATTCCAGTACATTAAGAAAGCCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| 3UTR CCA 90 bp | CAATGGCATCTCTCATCTTTCTGTGGCAAACTGATAGATGTGAGGTaGAGGGGACAAGAGGGAAAAGCCTGGCCGCTACCAGCAGCTAGA | + |
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Preference number: 1 (lower is better) Translates to: QWHLSSFCGKLIDVR*RGQEGKAWPLPAAR Trigger: TCTAGCTGCTGGTAGCGGCCAGGCTTTTCCCTCTTGTCCCCTCCACCTCACATCTATCAGTTTGCCACAGAAAGATGAGAGATGCCATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| 3UTR CCA 90 bp | ATTAGGAAGGTCACATTCTGTCCAATGGCATCTCTCATCTTTCTGTaGCAAACTGATAGATGTGAGGTGGAGGGGACAAGAGGGAAAAGC | + |
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Preference number: 1 (lower is better) Translates to: IRKVTFCPMASLIFL*QTDRCEVEGTRGKS Trigger: GCTTTTCCCTCTTGTCCCCTCCACCTCACATCTATCAGTTTGCCACAGAAAGATGAGAGATGCCATTGGACAGAATGTGACCTTCCTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| 3UTR TCA 90 bp | GTCGATGTTTCTTTATTTCTCCACGGCACATGTGGATTTATCAAGTaGAGACTTTTTATTTTATCAATCTGTGAACTGTGTGAGGCTAAC | + |
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Preference number: 1 (lower is better) Translates to: VDVSLFLHGTCGFIK*RLFILSICELCEAN Trigger: GTTAGCCTCACACAGTTCACAGATTGATAAAATAAAAAGTCTTCACTTGATAAATCCACATGTGCCGTGGAGAAATAAAGAAACATCGAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204224.3 |
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| 3UTR-3UTR TCA 90 bp | GAATTAGGGGCCAGTGGAGGCCACTGGTCACAGAAGCTCAGGTGTCTTAGCTGTGGTAGACCCTGCTACTaGATGGGCAAGAGAAGATGT | + |
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Preference number: 2 (lower is better) Translates to: ELGASGGHWSQKLRCLSCGRPCY*MGKRRC Trigger: ACATCTTCTCTTGCCCATTCAGTAGCAGGGTCTACC...ACAGCTAAGACACCTGAGCTTCTGTGACCAGTGGCCTCCACTGGCCCCTAATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| 3UTR-3UTR CCA 90 bp | ATCATTAGGAAGGTCACATTCTGTCCAATGGCATCTCTCATCTTTCTGTGGCAAGCCAGTGGAGGCCACTaGTCACAGAAGCTCAGGTGT | + |
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Preference number: 2 (lower is better) Translates to: IIRKVTFCPMASLIFLWQASGGH*SQKLRC Trigger: ACACCTGAGCTTCTGTGACCAGTGGCCTCCACTGGC...TTGCCACAGAAAGATGAGAGATGCCATTGGACAGAATGTGACCTTCCTAATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| 3UTR-3UTR CCA 90 bp | CATCGGGGATTTGAGCAATCCAAACACACACAATTGGCACTTCAGAAAGAAAGAGGAATTAGGGGCCAGTaGAGGCCACTGGTCACAGAA | + |
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Preference number: 2 (lower is better) Translates to: HRGFEQSKHTQLALQKERGIRGQ*RPLVTE Trigger: TTCTGTGACCAGTGGCCTCCACTGGCCCCTAATTCC...TCTTTCTTTCTGAAGTGCCAATTGTGTGTGTTTGGATTGCTCAAATCCCCGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204224.3 |
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| 3UTR-3UTR TCA 90 bp | GGCTTTAAATACTGTATGTATGCACACTATTTGGCTAAACTGACTGTGGCCCAGGGTAGACCCTGCTACTaGATGGGCAAGAGAAGATGT | + |
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Preference number: 2 (lower is better) Translates to: GFKYCMYAHYLAKLTVAQGRPCY*MGKRRC Trigger: ACATCTTCTCTTGCCCATTCAGTAGCAGGGTCTACC...CTGGGCCACAGTCAGTTTAGCCAAATAGTGTGCATACATACAGTATTTAAAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| 3UTR-3UTR TCA 90 bp | ATCATTAGGAAGGTCACATTCTGTCCAATGGCATCTCTCATCTTTCTGTGGCAAACTATTTGGCTAAACTaGCTGTGGCCCAGAGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: IIRKVTFCPMASLIFLWQTIWLN*LWPRAG Trigger: ACCAGCTCTGGGCCACAGTCAGTTTAGCCAAATAGT...TTGCCACAGAAAGATGAGAGATGCCATTGGACAGAATGTGACCTTCCTAATGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| 3UTR-3UTR CCA 90 bp | ATGTACATATATCAACACGGGATGCCCAATATAAGCCACACTTTAGAAATGTTCGCCAGTGGAGGCCACTaGTCACAGAAGCTCAGGTGT | + |
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Preference number: 2 (lower is better) Translates to: MYIYQHGMPNISHTLEMFASGGH*SQKLRC Trigger: ACACCTGAGCTTCTGTGACCAGTGGCCTCCACTGGC...GAACATTTCTAAAGTGTGGCTTATATTGGGCATCCCGTGTTGATATATGTACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| 3UTR-3UTR TCA 90 bp | TTCTGTCCAATGGCATCTCTCATCTTTCTGTGGCAAACTGATAGATGTGAGGTGAACTCTGACACAAAATaGAACCTTCCACCTCACACC | + |
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Preference number: 2 (lower is better) Translates to: FCPMASLIFLWQTDRCEVNSDTK*NLPPHT Trigger: GGTGTGAGGTGGAAGGTTTCATTTTGTGTCAGAGTT...CACCTCACATCTATCAGTTTGCCACAGAAAGATGAGAGATGCCATTGGACAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| 3UTR-3UTR CCA 90 bp | TGTTTGAGAAAAGACGCAGGATTTGATCTAGTCGATGTTTCTTTATTTCTCCACCTGATAGATGTGAGGTaGAGGGGACAAGAGGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: CLRKDAGFDLVDVSLFLHLIDVR*RGQEGK Trigger: TTTTCCCTCTTGTCCCCTCCACCTCACATCTATCAG...GTGGAGAAATAAAGAAACATCGACTAGATCAAATCCTGCGTCTTTTCTCAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204224.3 |
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| 3UTR-3UTR CCA 90 bp | TCATGTTTGAGAAAAGACGCAGGATTTGATCTAGTCGATGTTTCTTTATTTCTCTCACCACCACAGAAATaGTCACATGGCAAGGCACTG | + |
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Preference number: 2 (lower is better) Translates to: SCLRKDAGFDLVDVSLFLSPPQK*SHGKAL Trigger: CAGTGCCTTGCCATGTGACCATTTCTGTGGTGGTGA...GAGAAATAAAGAAACATCGACTAGATCAAATCCTGCGTCTTTTCTCAAACATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204224.3 |
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| 3UTR-3UTR TCA 90 bp | AAAATAACTACACGTATGCTTTCGTTTCTTTCCCCTCCAAACTGGTTGATTAGATGTGTCCCTTCCCAGTaGGAAAACAATTGCTTTCAC | + |
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Preference number: 2 (lower is better) Translates to: KITTRMLSFLSPPNWLIRCVPSQ*ENNCFH Trigger: GTGAAAGCAATTGTTTTCTCACTGGGAAGGGACACA...TCTAATCAACCAGTTTGGAGGGGAAAGAAACGAAAGCATACGTGTAGTTATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000204224.3 |
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| 3UTR-3UTR CCA 90 bp | GTACATATATCAACACGGGATGCCCAATATAAGCCACACTTTAGAAATGTTCATGACCCTGCTACTGAATaGGCAAGAGAAGATGTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: VHISTRDAQYKPHFRNVHDPATE*AREDVK Trigger: TTTCACATCTTCTCTTGCCCATTCAGTAGCAGGGTC...ATGAACATTTCTAAAGTGTGGCTTATATTGGGCATCCCGTGTTGATATATGTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| 3UTR-3UTR TCA 90 bp | TCATGTTTGAGAAAAGACGCAGGATTTGATCTAGTCGATGTTTCTTTATTTCTCTGTGTGAGGCTAACATaGAATAAAGTGTGGCTCGCT | + |
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Preference number: 2 (lower is better) Translates to: SCLRKDAGFDLVDVSLFLCVRLT*NKVWLA Trigger: AGCGAGCCACACTTTATTTCATGTTAGCCTCACACA...GAGAAATAAAGAAACATCGACTAGATCAAATCCTGCGTCTTTTCTCAAACATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204224.3 |
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| 3UTR CCA 72 bp | CCGGGGCGTACGGATGGGAAGACTGTTACACCGACGTaGCCCCTGCTACACGGCACAGTGCGTGACTGCACC | + |
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Preference number: 3 (lower is better) Translates to: PGRTDGKTVTPT*PLLHGTVRDCT Trigger: GGTGCAGTCACGCACTGTGCCGTGTAGCAGGGGCCACGTCGGTGTAACAGTCTTCCCATCCGTACGCCCCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204224.3 |
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| 3UTR GCA 72 bp | CTGTTACACCGACGTGGCCCCTGCTACACGGCACAGTaGGTGACTGCACCACACCACCCTGACCACCGTCAG | + |
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Preference number: 3 (lower is better) Translates to: LLHRRGPCYTAQ*VTAPHHPDHRQ Trigger: CTGACGGTGGTCAGGGTGGTGTGGTGCAGTCACGCACTGTGCCGTGTAGCAGGGGCCACGTCGGTGTAACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204224.3 |
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| 3UTR GCA 72 bp | GTACGGATGGGAAGACTGTTACACCGACGTGGCCCCTaGTACACGGCACAGTGCGTGACTGCACCACACCAC | + |
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Preference number: 3 (lower is better) Translates to: VRMGRLLHRRGP*YTAQCVTAPHH Trigger: GTGGTGTGGTGCAGTCACGCACTGTGCCGTGTAGCAGGGGCCACGTCGGTGTAACAGTCTTCCCATCCGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204224.3 |
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| 3UTR CCA 72 bp | CTCTCATCTTTCTGTGGCAAACTGATAGATGTGAGGTaGAGGGGACAAGAGGGAAAAGCCTGGCCGCTACCA | + |
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Preference number: 3 (lower is better) Translates to: LSSFCGKLIDVR*RGQEGKAWPLP Trigger: TGGTAGCGGCCAGGCTTTTCCCTCTTGTCCCCTCCACCTCACATCTATCAGTTTGCCACAGAAAGATGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| 3UTR GCA 72 bp | GGGCACATAGGGGGACTTAGGAACCAACAGCATAGCTaGAGCAGATTCTCTATGACTAAGTATTGCAGGGTC | + |
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Preference number: 3 (lower is better) Translates to: GHIGGLRNQQHS*SRFSMTKYCRV Trigger: GACCCTGCAATACTTAGTCATAGAGAATCTGCTGCAGCTATGCTGTTGGTTCCTAAGTCCCCCTATGTGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204224.3 |
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| 3UTR TCA 72 bp | TTATTTTATCAATCTGTGAACTGTGTGAGGCTAACATaGAATAAAGTGTGGCTCGCTGTGCCGGGGCGTACG | + |
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Preference number: 3 (lower is better) Translates to: LFYQSVNCVRLT*NKVWLAVPGRT Trigger: CGTACGCCCCGGCACAGCGAGCCACACTTTATTTCATGTTAGCCTCACACAGTTCACAGATTGATAAAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204224.3 |
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| 3UTR CCA 72 bp | AAAAGGACATCATTAGGAAGGTCACATTCTGTCCAATaGCATCTCTCATCTTTCTGTGGCAAACTGATAGAT | + |
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Preference number: 3 (lower is better) Translates to: KRTSLGRSHSVQ*HLSSFCGKLID Trigger: ATCTATCAGTTTGCCACAGAAAGATGAGAGATGCCATTGGACAGAATGTGACCTTCCTAATGATGTCCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| 3UTR-3UTR CAA 90 bp | AAAATAACTACACGTATGCTTTCGTTTCTTTCCCCTCCAAACTGGTTGATTAGAAATAGTCTTCACTCCTaGTCATGTTTGAGAAAAGAC | + |
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Preference number: 3 (lower is better) Translates to: KITTRMLSFLSPPNWLIRNSLHS*SCLRKD Trigger: GTCTTTTCTCAAACATGACAAGGAGTGAAGACTATT...TCTAATCAACCAGTTTGGAGGGGAAAGAAACGAAAGCATACGTGTAGTTATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000204224.3 |
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| CDS-3UTR TCA 90 bp | AGACTGTTACACCGACGTGGCCCCTGCTACACGGCACAGTGCGTGACTGCACCACTACCAGTGGCACCTTaGGCTCCAGCTCCCGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: RLLHRRGPCYTAQCVTAPLPVAP*APAPGR Trigger: CCTGCCGGGAGCTGGAGCTCAAGGTGCCACTGGTAG...TGGTGCAGTCACGCACTGTGCCGTGTAGCAGGGGCCACGTCGGTGTAACAGTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204224.3 |
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| CDS-3UTR TCA 90 bp | ATTGCTTTCACAGTAGTCAGGGACATGCCCTTCTTCATGGGAGCCAGGGAGAGCGGAGTCCGCTGCTCTTaGGGATATTCTGAGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: IAFTVVRDMPFFMGARESGVRCS*GYSEPP Trigger: AGGAGGCTCAGAATATCCTCAAGAGCAGCGGACTCC...GCTCTCCCTGGCTCCCATGAAGAAGGGCATGTCCCTGACTACTGTGAAAGCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| CDS-3UTR GCA 90 bp | AGACTGTTACACCGACGTGGCCCCTGCTACACGGCACAGTGCGTGACTGCACCACGTGAGCAGTTTGAATaGTTCATAGACTTGGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: RLLHRRGPCYTAQCVTAPREQFE*FIDLGF Trigger: GAAGCCCAAGTCTATGAAGCATTCAAACTGCTCACG...TGGTGCAGTCACGCACTGTGCCGTGTAGCAGGGGCCACGTCGGTGTAACAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204224.3 |
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| CDS-3UTR GCA 90 bp | CATCGGGGATTTGAGCAATCCAAACACACACAATTGGCACTTCAGAAAGAAAGAAGAAGCTTCCCAGCCTaGGCCGCGATGGCCACCGGG | + |
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Preference number: 4 (lower is better) Translates to: HRGFEQSKHTQLALQKERRSFPA*AAMATG Trigger: CCCGGTGGCCATCGCGGCGCAGGCTGGGAAGCTTCT...TCTTTCTTTCTGAAGTGCCAATTGTGTGTGTTTGGATTGCTCAAATCCCCGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204224.3 |
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| CDS-3UTR TCA 90 bp | GTACATATATCAACACGGGATGCCCAATATAAGCCACACTTTAGAAATGTTCATCTACCAGTGGCACCTTaGGCTCCAGCTCCCGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: VHISTRDAQYKPHFRNVHLPVAP*APAPGR Trigger: CCTGCCGGGAGCTGGAGCTCAAGGTGCCACTGGTAG...ATGAACATTTCTAAAGTGTGGCTTATATTGGGCATCCCGTGTTGATATATGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| CDS-3UTR TCA 90 bp | GGGATGCCCAATATAAGCCACACTTTAGAAATGTTCATGGGCTTTCTTAATGTAGGTCCACAGCTGACGTaGTGGGGAGTCCGCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: GMPNISHTLEMFMGFLNVGPQLT*WGVRCS Trigger: AGAGCAGCGGACTCCCCATCACGTCAGCTGTGGACC...TACATTAAGAAAGCCCATGAACATTTCTAAAGTGTGGCTTATATTGGGCATCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| CDS-3UTR GCA 90 bp | CATTCAGCAACTCTGACACAAAATGAAACCTTCCACCTCACACCCATGACTAAGCCAGATTTTCTGCCATaGGCTGGGCCTGGCTATCCT | + |
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Preference number: 4 (lower is better) Translates to: HSATLTQNETFHLTPMTKPDFLP*AGPGYP Trigger: AGGATAGCCAGGCCCAGCGCATGGCAGAAAATCTGG...CTTAGTCATGGGTGTGAGGTGGAAGGTTTCATTTTGTGTCAGAGTTGCTGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| CDS-3UTR TCA 90 bp | ATCATTAGGAAGGTCACATTCTGTCCAATGGCATCTCTCATCTTTCTGTGGCAAGGAGTCCGCTGCTCTTaGGGATATTCTGAGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: IIRKVTFCPMASLIFLWQGVRCS*GYSEPP Trigger: AGGAGGCTCAGAATATCCTCAAGAGCAGCGGACTCC...TTGCCACAGAAAGATGAGAGATGCCATTGGACAGAATGTGACCTTCCTAATGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| CDS-3UTR TCA 90 bp | TGTTTGAGAAAAGACGCAGGATTTGATCTAGTCGATGTTTCTTTATTTCTCCACGGTCCACAGCTGACGTaGTGGGGAGTCCGCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: CLRKDAGFDLVDVSLFLHGPQLT*WGVRCS Trigger: AGAGCAGCGGACTCCCCATCACGTCAGCTGTGGACC...GTGGAGAAATAAAGAAACATCGACTAGATCAAATCCTGCGTCTTTTCTCAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204224.3 |
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| CDS-3UTR GCA 90 bp | CATCGGGGATTTGAGCAATCCAAACACACACAATTGGCACTTCAGAAAGAAAGACCAGATTTTCTGCCATaGGCTGGGCCTGGCTATCCT | + |
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Preference number: 4 (lower is better) Translates to: HRGFEQSKHTQLALQKERPDFLP*AGPGYP Trigger: AGGATAGCCAGGCCCAGCGCATGGCAGAAAATCTGG...TCTTTCTTTCTGAAGTGCCAATTGTGTGTGTTTGGATTGCTCAAATCCCCGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204224.3 |
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| CDS-3UTR CCA 90 bp | AGTGAGAAAACAATTGCTTTCACAGTAGTCAGGGACATGCCCTTCTTCATGGGAATGAGCTTCTTGCTCTaGTACTCCTGCAGGTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: SEKTIAFTVVRDMPFFMGMSFLL*YSCRFS Trigger: GCTGAACCTGCAGGAGTACCAGAGCAAGAAGCTCAT...TCCCATGAAGAAGGGCATGTCCCTGACTACTGTGAAAGCAATTGTTTTCTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204224.3 |
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| CDS-3UTR GCA 90 bp | CATTCAGCAACTCTGACACAAAATGAAACCTTCCACCTCACACCCATGACTAAGATTCAATCTCTTGGCTaGCTCCAGAGCCTCTTTAGC | + |
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Preference number: 4 (lower is better) Translates to: HSATLTQNETFHLTPMTKIQSLG*LQSLFS Trigger: GCTAAAGAGGCTCTGGAGGCAGCCAAGAGATTGAAT...CTTAGTCATGGGTGTGAGGTGGAAGGTTTCATTTTGTGTCAGAGTTGCTGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| CDS-3UTR CCA 90 bp | ATCATTAGGAAGGTCACATTCTGTCCAATGGCATCTCTCATCTTTCTGTGGCAATTGCATTCAATCTCTTaGCTGCCTCCAGAGCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: IIRKVTFCPMASLIFLWQLHSIS*LPPEPL Trigger: AAGAGGCTCTGGAGGCAGCCAAGAGATTGAATGCAA...TTGCCACAGAAAGATGAGAGATGCCATTGGACAGAATGTGACCTTCCTAATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| CDS-3UTR TCA 90 bp | CATTCAGCAACTCTGACACAAAATGAAACCTTCCACCTCACACCCATGACTAAGTACAGCTTTGTAATCTaGTCTGCAGCCTGGTTTTTC | + |
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Preference number: 4 (lower is better) Translates to: HSATLTQNETFHLTPMTKYSFVI*SAAWFF Trigger: GAAAAACCAGGCTGCAGATCAGATTACAAAGCTGTA...CTTAGTCATGGGTGTGAGGTGGAAGGTTTCATTTTGTGTCAGAGTTGCTGAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| CDS-3UTR TCA 90 bp | GTACATATATCAACACGGGATGCCCAATATAAGCCACACTTTAGAAATGTTCATCTCCGTGCTCTGACATaGGCTTCTTGCTCTGGTACT | + |
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Preference number: 4 (lower is better) Translates to: VHISTRDAQYKPHFRNVHLRALT*ASCSGT Trigger: AGTACCAGAGCAAGAAGCTCATGTCAGAGCACGGAG...ATGAACATTTCTAAAGTGTGGCTTATATTGGGCATCCCGTGTTGATATATGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204224.3 |
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| CDS-3UTR TCA 90 bp | CATCGGGGATTTGAGCAATCCAAACACACACAATTGGCACTTCAGAAAGAAAGATACAGCTTTGTAATCTaGTCTGCAGCCTGGTTTTTC | + |
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Preference number: 4 (lower is better) Translates to: HRGFEQSKHTQLALQKERYSFVI*SAAWFF Trigger: GAAAAACCAGGCTGCAGATCAGATTACAAAGCTGTA...TCTTTCTTTCTGAAGTGCCAATTGTGTGTGTTTGGATTGCTCAAATCCCCGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204224.3 |
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| CDS-3UTR GCA 90 bp | GGGATGCCCAATATAAGCCACACTTTAGAAATGTTCATGGGCTTTCTTAATGTAATTCAATCTCTTGGCTaGCTCCAGAGCCTCTTTAGC | + |
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Preference number: 4 (lower is better) Translates to: GMPNISHTLEMFMGFLNVIQSLG*LQSLFS Trigger: GCTAAAGAGGCTCTGGAGGCAGCCAAGAGATTGAAT...TACATTAAGAAAGCCCATGAACATTTCTAAAGTGTGGCTTATATTGGGCATCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| CDS-3UTR CCA 90 bp | GGGATGCCCAATATAAGCCACACTTTAGAAATGTTCATGGGCTTTCTTAATGTAATCACAGGGCCATTATaGGACCGGTCCATTAGAATG | + |
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Preference number: 4 (lower is better) Translates to: GMPNISHTLEMFMGFLNVITGPL*DRSIRM Trigger: CATTCTAATGGACCGGTCCCATAATGGCCCTGTGAT...TACATTAAGAAAGCCCATGAACATTTCTAAAGTGTGGCTTATATTGGGCATCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| CDS-3UTR CCA 90 bp | ATGTACATATATCAACACGGGATGCCCAATATAAGCCACACTTTAGAAATGTTCTTTTCTGCCATGCGCTaGGCCTGGCTATCCTTTATC | + |
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Preference number: 4 (lower is better) Translates to: MYIYQHGMPNISHTLEMFFSAMR*AWLSFI Trigger: GATAAAGGATAGCCAGGCCCAGCGCATGGCAGAAAA...GAACATTTCTAAAGTGTGGCTTATATTGGGCATCCCGTGTTGATATATGTACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| CDS-3UTR TCA 90 bp | GGGATGCCCAATATAAGCCACACTTTAGAAATGTTCATGGGCTTTCTTAATGTACTCTTGAGGATATTCTaGGCCTCCTGCACATTAGTT | + |
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Preference number: 4 (lower is better) Translates to: GMPNISHTLEMFMGFLNVLLRIF*ASCTLV Trigger: AACTAATGTGCAGGAGGCTCAGAATATCCTCAAGAG...TACATTAAGAAAGCCCATGAACATTTCTAAAGTGTGGCTTATATTGGGCATCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| CDS-3UTR GCA 90 bp | ATCATTAGGAAGGTCACATTCTGTCCAATGGCATCTCTCATCTTTCTGTGGCAACTTTGTAATCTGATCTaGAGCCTGGTTTTTCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: IIRKVTFCPMASLIFLWQLCNLI*SLVFQR Trigger: TCTCTGAAAAACCAGGCTGCAGATCAGATTACAAAG...TTGCCACAGAAAGATGAGAGATGCCATTGGACAGAATGTGACCTTCCTAATGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| CDS-3UTR GCA 90 bp | GGGATGCCCAATATAAGCCACACTTTAGAAATGTTCATGGGCTTTCTTAATGTACGTGAGCAGTTTGAATaGTTCATAGACTTGGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: GMPNISHTLEMFMGFLNVREQFE*FIDLGF Trigger: GAAGCCCAAGTCTATGAAGCATTCAAACTGCTCACG...TACATTAAGAAAGCCCATGAACATTTCTAAAGTGTGGCTTATATTGGGCATCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| CDS-3UTR CCA 90 bp | TGTTTGAGAAAAGACGCAGGATTTGATCTAGTCGATGTTTCTTTATTTCTCCACTTGCATTCAATCTCTTaGCTGCCTCCAGAGCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: CLRKDAGFDLVDVSLFLHLHSIS*LPPEPL Trigger: AAGAGGCTCTGGAGGCAGCCAAGAGATTGAATGCAA...GTGGAGAAATAAAGAAACATCGACTAGATCAAATCCTGCGTCTTTTCTCAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204224.3 |
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| CDS-3UTR CCA 90 bp | CCTAGATCTGGCTTTAAATACTGTATGTATGCACACTATTTGGCTAAACTGACTATCACAGGGCCATTATaGGACCGGTCCATTAGAATG | + |
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Preference number: 4 (lower is better) Translates to: PRSGFKYCMYAHYLAKLTITGPL*DRSIRM Trigger: CATTCTAATGGACCGGTCCCATAATGGCCCTGTGAT...AGTCAGTTTAGCCAAATAGTGTGCATACATACAGTATTTAAAGCCAGATCTAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| CDS-3UTR CCA 90 bp | CCTAGATCTGGCTTTAAATACTGTATGTATGCACACTATTTGGCTAAACTGACTACTTCTTTGCCACACTaGCAACAGCTTTCTTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: PRSGFKYCMYAHYLAKLTTSLPH*QQLSWL Trigger: CAGCCAAGAAAGCTGTTGCCAGTGTGGCAAAGAAGT...AGTCAGTTTAGCCAAATAGTGTGCATACATACAGTATTTAAAGCCAGATCTAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| CDS-3UTR CCA 90 bp | ATGTACATATATCAACACGGGATGCCCAATATAAGCCACACTTTAGAAATGTTCACTTCTTTGCCACACTaGCAACAGCTTTCTTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: MYIYQHGMPNISHTLEMFTSLPH*QQLSWL Trigger: CAGCCAAGAAAGCTGTTGCCAGTGTGGCAAAGAAGT...GAACATTTCTAAAGTGTGGCTTATATTGGGCATCCCGTGTTGATATATGTACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| CDS-3UTR GCA 90 bp | ATCATTAGGAAGGTCACATTCTGTCCAATGGCATCTCTCATCTTTCTGTGGCAATCAAAGATGTCAATCTaGTCCTTAAAGATGAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: IIRKVTFCPMASLIFLWQSKMSI*SLKMSS Trigger: AGAACTCATCTTTAAGGAGCAGATTGACATCTTTGA...TTGCCACAGAAAGATGAGAGATGCCATTGGACAGAATGTGACCTTCCTAATGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| CDS-3UTR GCA 90 bp | CCTAGATCTGGCTTTAAATACTGTATGTATGCACACTATTTGGCTAAACTGACTCTTTGTAATCTGATCTaGAGCCTGGTTTTTCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: PRSGFKYCMYAHYLAKLTLCNLI*SLVFQR Trigger: TCTCTGAAAAACCAGGCTGCAGATCAGATTACAAAG...AGTCAGTTTAGCCAAATAGTGTGCATACATACAGTATTTAAAGCCAGATCTAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| CDS-3UTR CAA 90 bp | GAATTAGGGGCCAGTGGAGGCCACTGGTCACAGAAGCTCAGGTGTCTTAGCTGTAGCTCCCGGCAGGCTTaGGTGATTCCGTTGGCAATG | + |
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Preference number: 5 (lower is better) Translates to: ELGASGGHWSQKLRCLSCSSRQA*VIPLAM Trigger: CATTGCCAACGGAATCACCAAAGCCTGCCGGGAGCT...ACAGCTAAGACACCTGAGCTTCTGTGACCAGTGGCCTCCACTGGCCCCTAATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| CDS-3UTR CAA 90 bp | CATTCAGCAACTCTGACACAAAATGAAACCTTCCACCTCACACCCATGACTAAGACTACCAGTGGCACCTaGAGCTCCAGCTCCCGGCAG | + |
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Preference number: 5 (lower is better) Translates to: HSATLTQNETFHLTPMTKTTSGT*SSSSRQ Trigger: CTGCCGGGAGCTGGAGCTCAAGGTGCCACTGGTAGT...CTTAGTCATGGGTGTGAGGTGGAAGGTTTCATTTTGTGTCAGAGTTGCTGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| CDS GCA 90 bp | ATGCGCTGGGCCTGGCTATCCTTTATCCCTTCAAAGATGTCAATCTaGTCCTTAAAGATGAGTTCTGGACTGGAAGCTGCCACTTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: MRWAWLSFIPSKMSI*SLKMSSGLEAATSS Trigger: TGAGGAAGTGGCAGCTTCCAGTCCAGAACTCATCTTTAAGGAGCAGATTGACATCTTTGAAGGGATAAAGGATAGCCAGGCCCAGCGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| CDS-3UTR CAA 90 bp | TGTTTGAGAAAAGACGCAGGATTTGATCTAGTCGATGTTTCTTTATTTCTCCACAGCTCCCGGCAGGCTTaGGTGATTCCGTTGGCAATG | + |
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Preference number: 5 (lower is better) Translates to: CLRKDAGFDLVDVSLFLHSSRQA*VIPLAM Trigger: CATTGCCAACGGAATCACCAAAGCCTGCCGGGAGCT...GTGGAGAAATAAAGAAACATCGACTAGATCAAATCCTGCGTCTTTTCTCAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204224.3 |
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| CDS-3UTR CAA 90 bp | GTACATATATCAACACGGGATGCCCAATATAAGCCACACTTTAGAAATGTTCATTTTGCATTCAATCTCTaGGCTGCCTCCAGAGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: VHISTRDAQYKPHFRNVHFAFNL*AASRAS Trigger: AGAGGCTCTGGAGGCAGCCAAGAGATTGAATGCAAA...ATGAACATTTCTAAAGTGTGGCTTATATTGGGCATCCCGTGTTGATATATGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| CDS-3UTR CAA 90 bp | CCTAGATCTGGCTTTAAATACTGTATGTATGCACACTATTTGGCTAAACTGACTTTTGCATTCAATCTCTaGGCTGCCTCCAGAGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: PRSGFKYCMYAHYLAKLTFAFNL*AASRAS Trigger: AGAGGCTCTGGAGGCAGCCAAGAGATTGAATGCAAA...AGTCAGTTTAGCCAAATAGTGTGCATACATACAGTATTTAAAGCCAGATCTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| CDS GCA 72 bp | CTGGTTTTTCAGAGACCCAAGGAAGCCCAGATTTTCTaGCATGCGCTGGGCCTGGCTATCCTTTATCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LVFQRPKEAQIF*HALGLAILYPF Trigger: GAAGGGATAAAGGATAGCCAGGCCCAGCGCATGGCAGAAAATCTGGGCTTCCTTGGGTCTCTGAAAAACCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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| CDS CAA 72 bp | AATCTCTTGGCTGCCTCCAGAGCCTCTTTAGCAGTGTaGGCAACAAAGAACCTCTGCACTCTCACTCCGTGC | + |
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Preference number: 6 (lower is better) Translates to: NLLAASRASLAV*ATKNLCTLTPC Trigger: GCACGGAGTGAGAGTGCAGAGGTTCTTTGTTGCCAACACTGCTAAAGAGGCTCTGGAGGCAGCCAAGAGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 ENSMUST00000204567.2 |
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| CDS CAA 90 bp | TTTGCATTCAATCTCTTGGCTGCCTCCAGAGCCTCTTTAGCAGTGTaGGCAACAAAGAACCTCTGCACTCTCACTCCGTGCTCTGACATG | + |
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Preference number: 6 (lower is better) Translates to: FAFNLLAASRASLAV*ATKNLCTLTPCSDM Trigger: CATGTCAGAGCACGGAGTGAGAGTGCAGAGGTTCTTTGTTGCCAACACTGCTAAAGAGGCTCTGGAGGCAGCCAAGAGATTGAATGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204224.3 |
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| CDS GCA 72 bp | AGAGCCTCTTTAGCAGTGTTGGCAACAAAGAACCTCTaGACTCTCACTCCGTGCTCTGACATGAGCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: RASLAVLATKNL*TLTPCSDMSFL Trigger: CAAGAAGCTCATGTCAGAGCACGGAGTGAGAGTGCAGAGGTTCTTTGTTGCCAACACTGCTAAAGAGGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204224.3 |
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| CDS GCA 72 bp | GCCTGGCTATCCTTTATCCCTTCAAAGATGTCAATCTaGTCCTTAAAGATGAGTTCTGGACTGGAAGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: AWLSFIPSKMSI*SLKMSSGLEAA Trigger: GGCAGCTTCCAGTCCAGAACTCATCTTTAAGGAGCAGATTGACATCTTTGAAGGGATAAAGGATAGCCAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079847.8 ENSMUST00000204224.3 |
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