Pregenerated sensors for SUCLG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052738Ensembl transcript IDs: ENSMUST00000064740.9, ENSMUST00000123159.8, ENSMUST00000203632.2
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTTCTGGCCACCCTTCCCTGGAGTGGTTCCTCCCACGAGTTTGGTaGCGTACTCCAAAGCCTGCTGACTGTGAAAGGTACCCTGTTTGC | + |
|
Preference number: 1 (lower is better) Translates to: ASGHPSLEWFLPRVW*RTPKPADCERYPVC Trigger: GCAAACAGGGTACCTTTCACAGTCAGCAGGCTTTGGAGTACGGCACCAAACTCGTGGGAGGAACCACTCCAGGGAAGGGTGGCCAGAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123159.8 |
||
| 3UTR CCA 90 bp | GGTGCTTCTGGCCACCCTTCCCTGGAGTGGTTCCTCCCACGAGTTTaGTGCCGTACTCCAAAGCCTGCTGACTGTGAAAGGTACCCTGTT | + |
|
Preference number: 1 (lower is better) Translates to: GASGHPSLEWFLPRV*CRTPKPADCERYPV Trigger: AACAGGGTACCTTTCACAGTCAGCAGGCTTTGGAGTACGGCACCAAACTCGTGGGAGGAACCACTCCAGGGAAGGGTGGCCAGAAGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123159.8 |
||
| 3UTR CCA 90 bp | TTGGCTTCCTTCACAGTATTAAAGACGGGCAAGCCCAGGTGCTTCTaGCCACCCTTCCCTGGAGTGGTTCCTCCCACGAGTTTGGTGCCG | + |
|
Preference number: 1 (lower is better) Translates to: LASFTVLKTGKPRCF*PPFPGVVPPTSLVP Trigger: CGGCACCAAACTCGTGGGAGGAACCACTCCAGGGAAGGGTGGCCAGAAGCACCTGGGCTTGCCCGTCTTTAATACTGTGAAGGAAGCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123159.8 |
||
| 3UTR GCA 90 bp | GTTCCCTGGCGTGTCAGTCTGTGCTTGACCCGCACCATATCCTGCTaGGGAATACCTTCCGTAATGCACACAACCAAGGGAATCTCCGCG | + |
|
Preference number: 1 (lower is better) Translates to: VPWRVSLCLTRTISC*GIPSVMHTTKGISA Trigger: CGCGGAGATTCCCTTGGTTGTGTGCATTACGGAAGGTATTCCGCAGCAGGATATGGTGCGGGTCAAGCACAGACTGACACGCCAGGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123159.8 |
||
| 3UTR GCA 90 bp | GTCGTTCCCTGGCGTGTCAGTCTGTGCTTGACCCGCACCATATCCTaGTGCGGAATACCTTCCGTAATGCACACAACCAAGGGAATCTCC | + |
|
Preference number: 1 (lower is better) Translates to: VVPWRVSLCLTRTIS*CGIPSVMHTTKGIS Trigger: GGAGATTCCCTTGGTTGTGTGCATTACGGAAGGTATTCCGCAGCAGGATATGGTGCGGGTCAAGCACAGACTGACACGCCAGGGAACGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123159.8 |
||
| 3UTR GCA 90 bp | TTCTCTTTGGCTTCCTTCACAGTATTAAAGACGGGCAAGCCCAGGTaGTTCTGGCCACCCTTCCCTGGAGTGGTTCCTCCCACGAGTTTG | + |
|
Preference number: 1 (lower is better) Translates to: FSLASFTVLKTGKPR*FWPPFPGVVPPTSL Trigger: CAAACTCGTGGGAGGAACCACTCCAGGGAAGGGTGGCCAGAAGCACCTGGGCTTGCCCGTCTTTAATACTGTGAAGGAAGCCAAAGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123159.8 |
||
| 3UTR TCA 90 bp | GATTTCCCACATACTGAGAGACCAACCAGTGTCAGCTGCATGGGCTaGCAGCCTGGACTGGCCCTCACGTCTAGATTTCTTCCACAGCTT | + |
|
Preference number: 1 (lower is better) Translates to: DFPHTERPTSVSCMG*QPGLALTSRFLPQL Trigger: AAGCTGTGGAAGAAATCTAGACGTGAGGGCCAGTCCAGGCTGTCAGCCCATGCAGCTGACACTGGTTGGTCTCTCAGTATGTGGGAAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| 3UTR CCA 90 bp | CTGAGAGACCAACCAGTGTCAGCTGCATGGGCTGACAGCCTGGACTaGCCCTCACGTCTAGATTTCTTCCACAGCTTTAAAGAATTTCTT | + |
|
Preference number: 1 (lower is better) Translates to: LRDQPVSAAWADSLD*PSRLDFFHSFKEFL Trigger: AAGAAATTCTTTAAAGCTGTGGAAGAAATCTAGACGTGAGGGCCAGTCCAGGCTGTCAGCCCATGCAGCTGACACTGGTTGGTCTCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| 3UTR GCA 90 bp | AATACCTTCCGTAATGCACACAACCAAGGGAATCTCCGCGTCGATTaGTTCATTAATGGCAGCAGCAGCAAAAGGAGGAGGGACATAGAT | + |
|
Preference number: 1 (lower is better) Translates to: NTFRNAHNQGNLRVD*FINGSSSKRRRDID Trigger: ATCTATGTCCCTCCTCCTTTTGCTGCTGCTGCCATTAATGAAGCAATCGACGCGGAGATTCCCTTGGTTGTGTGCATTACGGAAGGTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123159.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGCATGATGCCGATTTTGCATTCTCCAGGGTTGATGACGCCGGGGCAGTTTGGCACCCTTCCCTGGAGTaGTTCCTCCCACGAGTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: RHDADFAFSRVDDAGAVWHPSLE*FLPRVW Trigger: CCAAACTCGTGGGAGGAACCACTCCAGGGAAGGGTG...CCAAACTGCCCCGGCGTCATCAACCCTGGAGAATGCAAAATCGGCATCATGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123159.8 |
||
| 3UTR-3UTR GCA 90 bp | CCACGAGTTTGGTGCCGTACTCCAAAGCCTGCTGACTGTGAAAGGTACCCTGTTCGTATCCCATTCTGTTaGACCACACACTTTCACGCT | + |
|
Preference number: 2 (lower is better) Translates to: PRVWCRTPKPADCERYPVRIPFC*TTHFHA Trigger: AGCGTGAAAGTGTGTGGTGCAACAGAATGGGATACG...AACAGGGTACCTTTCACAGTCAGCAGGCTTTGGAGTACGGCACCAAACTCGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123159.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTTTTCTCTTTGGCTTCCTTCACAGTATTAAAGACGGGCAAGCCCAGGTGCTTCTCCCACGAGTTTGGTaGCGTACTCCAAAGCCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: CFLFGFLHSIKDGQAQVLLPRVW*RTPKPA Trigger: AGCAGGCTTTGGAGTACGGCACCAAACTCGTGGGAG...AAGCACCTGGGCTTGCCCGTCTTTAATACTGTGAAGGAAGCCAAAGAGAAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123159.8 |
||
| 3UTR-3UTR GCA 90 bp | CCGCACCATATCCTGCTGCGGAATACCTTCCGTAATGCACACAACCAAGGGAATGATGACAGAAGCCGTTaGTCCTGTTTTCTCTTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: PHHILLRNTFRNAHNQGNDDRSR*SCFLFG Trigger: GCCAAAGAGAAAACAGGAGCAACGGCTTCTGTCATC...ATTCCCTTGGTTGTGTGCATTACGGAAGGTATTCCGCAGCAGGATATGGTGCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123159.8 |
||
| 3UTR CCA 72 bp | GGCCACCCTTCCCTGGAGTGGTTCCTCCCACGAGTTTaGTGCCGTACTCCAAAGCCTGCTGACTGTGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GHPSLEWFLPRV*CRTPKPADCER Trigger: CCTTTCACAGTCAGCAGGCTTTGGAGTACGGCACCAAACTCGTGGGAGGAACCACTCCAGGGAAGGGTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123159.8 |
||
| 3UTR TCA 72 bp | TTAGCCTCGTCGTTCCCTGGCGTGTCAGTCTGTGCTTaGCCCGCACCATATCCTGCTGCGGAATACCTTCCG | + |
|
Preference number: 3 (lower is better) Translates to: LASSFPGVSVCA*PAPYPAAEYLP Trigger: CGGAAGGTATTCCGCAGCAGGATATGGTGCGGGTCAAGCACAGACTGACACGCCAGGGAACGACGAGGCTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123159.8 |
||
| 3UTR GCA 72 bp | GCTTCCTTCACAGTATTAAAGACGGGCAAGCCCAGGTaGTTCTGGCCACCCTTCCCTGGAGTGGTTCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: ASFTVLKTGKPR*FWPPFPGVVPP Trigger: GGGAGGAACCACTCCAGGGAAGGGTGGCCAGAAGCACCTGGGCTTGCCCGTCTTTAATACTGTGAAGGAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123159.8 |
||
| 3UTR GCA 72 bp | CGTGTCAGTCTGTGCTTGACCCGCACCATATCCTGCTaGGGAATACCTTCCGTAATGCACACAACCAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: RVSLCLTRTISC*GIPSVMHTTKG Trigger: TCCCTTGGTTGTGTGCATTACGGAAGGTATTCCGCAGCAGGATATGGTGCGGGTCAAGCACAGACTGACACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123159.8 |
||
| 3UTR GCA 72 bp | TGGCGTGTCAGTCTGTGCTTGACCCGCACCATATCCTaGTGCGGAATACCTTCCGTAATGCACACAACCAAG | + |
|
Preference number: 3 (lower is better) Translates to: WRVSLCLTRTIS*CGIPSVMHTTK Trigger: CTTGGTTGTGTGCATTACGGAAGGTATTCCGCAGCAGGATATGGTGCGGGTCAAGCACAGACTGACACGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123159.8 |
||
| 3UTR CCA 72 bp | CAACCAGTGTCAGCTGCATGGGCTGACAGCCTGGACTaGCCCTCACGTCTAGATTTCTTCCACAGCTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: QPVSAAWADSLD*PSRLDFFHSFK Trigger: TTTAAAGCTGTGGAAGAAATCTAGACGTGAGGGCCAGTCCAGGCTGTCAGCCCATGCAGCTGACACTGGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| 3UTR GCA 72 bp | CGTAATGCACACAACCAAGGGAATCTCCGCGTCGATTaGTTCATTAATGGCAGCAGCAGCAAAAGGAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: RNAHNQGNLRVD*FINGSSSKRRR Trigger: CCTCCTCCTTTTGCTGCTGCTGCCATTAATGAAGCAATCGACGCGGAGATTCCCTTGGTTGTGTGCATTACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123159.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCCACCCTTCCCTGGAGTGGTTCCTCCCACGAGTTTGGTGCCGTACTCCAATGCTGCTGGAGACCATaGTTGCAGTGGCAGCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LATLPWSGSSHEFGAVLQCCWRP*LQWQPQ Trigger: CTGCGGCTGCCACTGCAACCATGGTCTCCAGCAGCA...TTGGAGTACGGCACCAAACTCGTGGGAGGAACCACTCCAGGGAAGGGTGGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123159.8 |
||
| CDS-3UTR GCA 90 bp | CATATCCTGCTGCGGAATACCTTCCGTAATGCACACAACCAAGGGAATCTCCGCCGGCGGCGAGGCCGCTaGTGCTGGAGACCATGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HILLRNTFRNAHNQGNLRRRRGR*CWRPWL Trigger: CAACCATGGTCTCCAGCAGCAGCGGCCTCGCCGCCG...GCGGAGATTCCCTTGGTTGTGTGCATTACGGAAGGTATTCCGCAGCAGGATATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123159.8 |
||
| 3UTR CAA 72 bp | TGGCCAGGCATGATGCCGATTTTGCATTCTCCAGGGTaGATGACGCCGGGGCAGTTTGGCCCGATTAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WPGMMPILHSPG*MTPGQFGPISL Trigger: GAGGCTAATCGGGCCAAACTGCCCCGGCGTCATCAACCCTGGAGAATGCAAAATCGGCATCATGCCTGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123159.8 |
||
| CDS-3UTR GCA 90 bp | CGCGTCGATTGCTTCATTAATGGCAGCAGCAGCAAAAGGAGGAGGGACATAGATCGGCGAGGCCGCTGCTaGTGGAGACCATGGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVDCFINGSSSKRRRDIDRRGRC*WRPWLQ Trigger: CTGCAACCATGGTCTCCAGCAGCAGCGGCCTCGCCG...ATCTATGTCCCTCCTCCTTTTGCTGCTGCTGCCATTAATGAAGCAATCGACGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123159.8 |
||
| CDS-3UTR GCA 90 bp | CATTCTAAAACTTGCCTGGATTTCCCACATACTGAGAGACCAACCAGTGTCAGCCGGCGGCGAGGCCGCTaGTGCTGGAGACCATGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HSKTCLDFPHTERPTSVSRRRGR*CWRPWL Trigger: CAACCATGGTCTCCAGCAGCAGCGGCCTCGCCGCCG...GCTGACACTGGTTGGTCTCTCAGTATGTGGGAAATCCAGGCAAGTTTTAGAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064740.9 ENSMUST00000203632.2 |
||
| CDS-3UTR GCA 90 bp | GACATTCTAAAACTTGCCTGGATTTCCCACATACTGAGAGACCAACCAGTGTCACGGCGGCGAGGCCGCTaGTGCTGGAGACCATGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: DILKLAWISHILRDQPVSRRRGR*CWRPWL Trigger: CAACCATGGTCTCCAGCAGCAGCGGCCTCGCCGCCG...TGACACTGGTTGGTCTCTCAGTATGTGGGAAATCCAGGCAAGTTTTAGAATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064740.9 ENSMUST00000203632.2 |
||
| CDS-3UTR GCA 90 bp | GACAGCCTGGACTGGCCCTCACGTCTAGATTTCTTCCACAGCTTTAAAGAATTTGTTGCAGGAGGAAGGTaGGCGACAACAGGCGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: DSLDWPSRLDFFHSFKEFVAGGR*ATTGGR Trigger: CCGCCCGCCTGTTGTCGCGCACCTTCCTCCTGCAAC...AAATTCTTTAAAGCTGTGGAAGAAATCTAGACGTGAGGGCCAGTCCAGGCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS-3UTR GCA 90 bp | AGGGACATAGATGACAGAAGCCGTTGCTCCTGTTTTCTCTTTGGCTTCCTTCACGCTGGAGACCATGGTTaGAGTGGCAGCCGCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RDIDDRSRCSCFLFGFLHAGDHG*SGSRSN Trigger: GTTGCTGCGGCTGCCACTGCAACCATGGTCTCCAGC...GTGAAGGAAGCCAAAGAGAAAACAGGAGCAACGGCTTCTGTCATCTATGTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123159.8 |
||
| CDS-3UTR GCA 90 bp | GACATTCTAAAACTTGCCTGGATTTCCCACATACTGAGAGACCAACCAGTGTCACGGCGAGGCCGCTGCTaGTGGAGACCATGGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DILKLAWISHILRDQPVSRRGRC*WRPWLQ Trigger: CTGCAACCATGGTCTCCAGCAGCAGCGGCCTCGCCG...TGACACTGGTTGGTCTCTCAGTATGTGGGAAATCCAGGCAAGTTTTAGAATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064740.9 ENSMUST00000203632.2 |
||
| CDS-3UTR GCA 90 bp | GACATTCTAAAACTTGCCTGGATTTCCCACATACTGAGAGACCAACCAGTGTCAGTTGCAGGAGGAAGGTaGGCGACAACAGGCGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: DILKLAWISHILRDQPVSVAGGR*ATTGGR Trigger: CCGCCCGCCTGTTGTCGCGCACCTTCCTCCTGCAAC...TGACACTGGTTGGTCTCTCAGTATGTGGGAAATCCAGGCAAGTTTTAGAATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064740.9 ENSMUST00000203632.2 |
||
| CDS-3UTR GCA 90 bp | GACATTCTAAAACTTGCCTGGATTTCCCACATACTGAGAGACCAACCAGTGTCAACGGGCAAGCCCAGGTaGTTCTGGCCACCCTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: DILKLAWISHILRDQPVSTGKPR*FWPPFP Trigger: AGGGAAGGGTGGCCAGAAGCACCTGGGCTTGCCCGT...TGACACTGGTTGGTCTCTCAGTATGTGGGAAATCCAGGCAAGTTTTAGAATGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS-3UTR GCA 90 bp | GACATTCTAAAACTTGCCTGGATTTCCCACATACTGAGAGACCAACCAGTGTCAGCTGGAGACCATGGTTaGAGTGGCAGCCGCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: DILKLAWISHILRDQPVSAGDHG*SGSRSN Trigger: GTTGCTGCGGCTGCCACTGCAACCATGGTCTCCAGC...TGACACTGGTTGGTCTCTCAGTATGTGGGAAATCCAGGCAAGTTTTAGAATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064740.9 ENSMUST00000203632.2 |
||
| CDS-3UTR CCA 90 bp | TTCCGTAATGCACACAACCAAGGGAATCTCCGCGTCGATTGCTTCATTAATGGCAGACCATGGTTGCAGTaGCAGCCGCAGCAACTACTG | + |
|
Preference number: 4 (lower is better) Translates to: FRNAHNQGNLRVDCFINGRPWLQ*QPQQLL Trigger: CAGTAGTTGCTGCGGCTGCCACTGCAACCATGGTCT...GCCATTAATGAAGCAATCGACGCGGAGATTCCCTTGGTTGTGTGCATTACGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123159.8 |
||
| CDS-3UTR CCA 90 bp | GACATTCTAAAACTTGCCTGGATTTCCCACATACTGAGAGACCAACCAGTGTCATGCTGCTGGAGACCATaGTTGCAGTGGCAGCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DILKLAWISHILRDQPVSCCWRP*LQWQPQ Trigger: CTGCGGCTGCCACTGCAACCATGGTCTCCAGCAGCA...TGACACTGGTTGGTCTCTCAGTATGTGGGAAATCCAGGCAAGTTTTAGAATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064740.9 ENSMUST00000203632.2 |
||
| CDS-3UTR CCA 90 bp | GACAGCCTGGACTGGCCCTCACGTCTAGATTTCTTCCACAGCTTTAAAGAATTTCACCCTTCCCTGGAGTaGTTCCTCCCACGAGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DSLDWPSRLDFFHSFKEFHPSLE*FLPRVW Trigger: CCAAACTCGTGGGAGGAACCACTCCAGGGAAGGGTG...AAATTCTTTAAAGCTGTGGAAGAAATCTAGACGTGAGGGCCAGTCCAGGCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS-3UTR GCA 90 bp | TGGCCCTCACGTCTAGATTTCTTCCACAGCTTTAAAGAATTTCTTGTTGTGTCCGCTGGAGACCATGGTTaGAGTGGCAGCCGCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: WPSRLDFFHSFKEFLVVSAGDHG*SGSRSN Trigger: GTTGCTGCGGCTGCCACTGCAACCATGGTCTCCAGC...GGACACAACAAGAAATTCTTTAAAGCTGTGGAAGAAATCTAGACGTGAGGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS-3UTR TCA 90 bp | GACATTCTAAAACTTGCCTGGATTTCCCACATACTGAGAGACCAACCAGTGTCAGAGGAGGGACATAGATaGCAGAAGCCGTTGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DILKLAWISHILRDQPVSEEGHR*QKPLLL Trigger: CAGGAGCAACGGCTTCTGTCATCTATGTCCCTCCTC...TGACACTGGTTGGTCTCTCAGTATGTGGGAAATCCAGGCAAGTTTTAGAATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS-3UTR TCA 90 bp | CATTCTAAAACTTGCCTGGATTTCCCACATACTGAGAGACCAACCAGTGTCAGCACCACCCCAGCACTCTaGAGAGCAGAGATCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HSKTCLDFPHTERPTSVSTTPAL*RAEIFS Trigger: AGAGAAGATCTCTGCTCTTCAGAGTGCTGGGGTGGT...GCTGACACTGGTTGGTCTCTCAGTATGTGGGAAATCCAGGCAAGTTTTAGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064740.9 ENSMUST00000203632.2 |
||
| CDS-3UTR GCA 90 bp | GACATTCTAAAACTTGCCTGGATTTCCCACATACTGAGAGACCAACCAGTGTCACTCCCACGAGTTTGGTaGCGTACTCCAAAGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DILKLAWISHILRDQPVSLPRVW*RTPKPA Trigger: AGCAGGCTTTGGAGTACGGCACCAAACTCGTGGGAG...TGACACTGGTTGGTCTCTCAGTATGTGGGAAATCCAGGCAAGTTTTAGAATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS-3UTR GCA 90 bp | GACAGCCTGGACTGGCCCTCACGTCTAGATTTCTTCCACAGCTTTAAAGAATTTAGCAATAATTGCCCCTaGATGGCCCATCCTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: DSLDWPSRLDFFHSFKEFSNNCP*MAHPSA Trigger: GGCAGAAGGATGGGCCATGCAGGGGCAATTATTGCT...AAATTCTTTAAAGCTGTGGAAGAAATCTAGACGTGAGGGCCAGTCCAGGCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS-3UTR GCA 90 bp | GACAGCCTGGACTGGCCCTCACGTCTAGATTTCTTCCACAGCTTTAAAGAATTTTCCTCCAGCAATAATTaGCCCTGCATGGCCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: DSLDWPSRLDFFHSFKEFSSSNN*PCMAHP Trigger: AGGATGGGCCATGCAGGGGCAATTATTGCTGGAGGA...AAATTCTTTAAAGCTGTGGAAGAAATCTAGACGTGAGGGCCAGTCCAGGCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS-3UTR CCA 90 bp | GACATTCTAAAACTTGCCTGGATTTCCCACATACTGAGAGACCAACCAGTGTCAAGACCATGGTTGCAGTaGCAGCCGCAGCAACTACTG | + |
|
Preference number: 4 (lower is better) Translates to: DILKLAWISHILRDQPVSRPWLQ*QPQQLL Trigger: CAGTAGTTGCTGCGGCTGCCACTGCAACCATGGTCT...TGACACTGGTTGGTCTCTCAGTATGTGGGAAATCCAGGCAAGTTTTAGAATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064740.9 ENSMUST00000203632.2 |
||
| CDS-3UTR TCA 90 bp | TGGCCCTCACGTCTAGATTTCTTCCACAGCTTTAAAGAATTTCTTGTTGTGTCCGTGTCAGTCTGTGCTTaGCCCGCACCATATCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WPSRLDFFHSFKEFLVVSVSVCA*PAPYPA Trigger: AGCAGGATATGGTGCGGGTCAAGCACAGACTGACAC...GGACACAACAAGAAATTCTTTAAAGCTGTGGAAGAAATCTAGACGTGAGGGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS-3UTR TCA 90 bp | GACATTCTAAAACTTGCCTGGATTTCCCACATACTGAGAGACCAACCAGTGTCAACCACCCCAGCACTCTaGAGAGCAGAGATCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: DILKLAWISHILRDQPVSTTPAL*RAEIFS Trigger: AGAGAAGATCTCTGCTCTTCAGAGTGCTGGGGTGGT...TGACACTGGTTGGTCTCTCAGTATGTGGGAAATCCAGGCAAGTTTTAGAATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064740.9 ENSMUST00000203632.2 |
||
| CDS-3UTR TCA 90 bp | GACAGCCTGGACTGGCCCTCACGTCTAGATTTCTTCCACAGCTTTAAAGAATTTCAGTTATACCAGCAATaGAGGACACTACAGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DSLDWPSRLDFFHSFKEFQLYQQ*RTLQAW Trigger: CCAAGCCTGTAGTGTCCTTCATTGCTGGTATAACTG...AAATTCTTTAAAGCTGTGGAAGAAATCTAGACGTGAGGGCCAGTCCAGGCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS-3UTR GCA 90 bp | TGGCCCTCACGTCTAGATTTCTTCCACAGCTTTAAAGAATTTCTTGTTGTGTCCACCCGCACCATATCCTaGTGCGGAATACCTTCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: WPSRLDFFHSFKEFLVVSTRTIS*CGIPSV Trigger: TACGGAAGGTATTCCGCAGCAGGATATGGTGCGGGT...GGACACAACAAGAAATTCTTTAAAGCTGTGGAAGAAATCTAGACGTGAGGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS-3UTR GCA 90 bp | TGGCCCTCACGTCTAGATTTCTTCCACAGCTTTAAAGAATTTCTTGTTGTGTCCCATGGCCCATCCTTCTaGCAGGAGGAGCAGTTATAC | + |
|
Preference number: 4 (lower is better) Translates to: WPSRLDFFHSFKEFLVVSHGPSF*QEEQLY Trigger: GTATAACTGCTCCTCCTGGCAGAAGGATGGGCCATG...GGACACAACAAGAAATTCTTTAAAGCTGTGGAAGAAATCTAGACGTGAGGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS-3UTR CCA 90 bp | GACAGCCTGGACTGGCCCTCACGTCTAGATTTCTTCCACAGCTTTAAAGAATTTAGGACACTACAGGCTTaGCCTTTGGACCTGAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: DSLDWPSRLDFFHSFKEFRTLQA*PLDLSY Trigger: ATAACTCAGGTCCAAAGGCCAAGCCTGTAGTGTCCT...AAATTCTTTAAAGCTGTGGAAGAAATCTAGACGTGAGGGCCAGTCCAGGCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS-3UTR CCA 90 bp | TGGCCCTCACGTCTAGATTTCTTCCACAGCTTTAAAGAATTTCTTGTTGTGTCCATAATTGCCCCTGCATaGCCCATCCTTCTGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WPSRLDFFHSFKEFLVVSIIAPA*PILLPG Trigger: TCCTGGCAGAAGGATGGGCCATGCAGGGGCAATTAT...GGACACAACAAGAAATTCTTTAAAGCTGTGGAAGAAATCTAGACGTGAGGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS-3UTR GCA 90 bp | GACATTCTAAAACTTGCCTGGATTTCCCACATACTGAGAGACCAACCAGTGTCAGATGACAGAAGCCGTTaGTCCTGTTTTCTCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DILKLAWISHILRDQPVSDDRSR*SCFLFG Trigger: GCCAAAGAGAAAACAGGAGCAACGGCTTCTGTCATC...TGACACTGGTTGGTCTCTCAGTATGTGGGAAATCCAGGCAAGTTTTAGAATGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS-3UTR TCA 90 bp | TGGCCCTCACGTCTAGATTTCTTCCACAGCTTTAAAGAATTTCTTGTTGTGTCCATTCTTCCCTTCTTGTaGATGTGGCCAGGCATGATG | + |
|
Preference number: 4 (lower is better) Translates to: WPSRLDFFHSFKEFLVVSILPFL*MWPGMM Trigger: CATCATGCCTGGCCACATTCACAAGAAGGGAAGAAT...GGACACAACAAGAAATTCTTTAAAGCTGTGGAAGAAATCTAGACGTGAGGGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS-3UTR TCA 90 bp | GACATTCTAAAACTTGCCTGGATTTCCCACATACTGAGAGACCAACCAGTGTCAGCATTTTCTTCAGCGTaGCCACCAATTTCACCAATC | + |
|
Preference number: 4 (lower is better) Translates to: DILKLAWISHILRDQPVSAFSSA*PPISPI Trigger: GATTGGTGAAATTGGTGGTCACGCTGAAGAAAATGC...TGACACTGGTTGGTCTCTCAGTATGTGGGAAATCCAGGCAAGTTTTAGAATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS-3UTR TCA 90 bp | TGGCCCTCACGTCTAGATTTCTTCCACAGCTTTAAAGAATTTCTTGTTGTGTCCCTTGGCCTTTGGACCTaGGTTATGCTCCTTCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: WPSRLDFFHSFKEFLVVSLGLWT*VMLLQK Trigger: TTTCTGAAGGAGCATAACTCAGGTCCAAAGGCCAAG...GGACACAACAAGAAATTCTTTAAAGCTGTGGAAGAAATCTAGACGTGAGGGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS-3UTR GCA 90 bp | GACATTCTAAAACTTGCCTGGATTTCCCACATACTGAGAGACCAACCAGTGTCATCCTCCAGCAATAATTaGCCCTGTTTGCCTGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: DILKLAWISHILRDQPVSSSSNN*PCLPVK Trigger: TTTCACAGGCAAACAGGGGCAATTATTGCTGGAGGA...TGACACTGGTTGGTCTCTCAGTATGTGGGAAATCCAGGCAAGTTTTAGAATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203632.2 |
||
| CDS GCA 90 bp | GCCGGAGGAAGGTGCGCGACAACAGGCGGGCGGCGGCGAGGCCGCTaGTGCTGGAGACCATGGTTGCAGTGGCAGCCGCAGCAACTACTG | + |
|
Preference number: 5 (lower is better) Translates to: AGGRCATTGGRRRGR*CWRPWLQWQPQQLL Trigger: CAGTAGTTGCTGCGGCTGCCACTGCAACCATGGTCTCCAGCAGCAGCGGCCTCGCCGCCGCCCGCCTGTTGTCGCGCACCTTCCTCCGGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123159.8 |
||
| CDS GCA 90 bp | GCAGGAGGAAGGTGCGCGACAACAGGCGGGCGGCGGCGAGGCCGCTaGTGCTGGAGACCATGGTTGCAGTGGCAGCCGCAGCAACTACTG | + |
|
Preference number: 5 (lower is better) Translates to: AGGRCATTGGRRRGR*CWRPWLQWQPQQLL Trigger: CAGTAGTTGCTGCGGCTGCCACTGCAACCATGGTCTCCAGCAGCAGCGGCCTCGCCGCCGCCCGCCTGTTGTCGCGCACCTTCCTCCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064740.9 ENSMUST00000203632.2 |
||
| CDS CCA 90 bp | GGAAGGTGCGCGACAACAGGCGGGCGGCGGCGAGGCCGCTGCTGCTaGAGACCATGGTTGCAGTGGCAGCCGCAGCAACTACTGTTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GRCATTGGRRRGRCC*RPWLQWQPQQLLLR Trigger: CCGCAACAGTAGTTGCTGCGGCTGCCACTGCAACCATGGTCTCCAGCAGCAGCGGCCTCGCCGCCGCCCGCCTGTTGTCGCGCACCTTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064740.9 ENSMUST00000123159.8 ENSMUST00000203632.2 |
||
| CDS GCA 90 bp | GGAGGAAGGTGCGCGACAACAGGCGGGCGGCGGCGAGGCCGCTGCTaGTGGAGACCATGGTTGCAGTGGCAGCCGCAGCAACTACTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GGRCATTGGRRRGRC*WRPWLQWQPQQLLL Trigger: CAACAGTAGTTGCTGCGGCTGCCACTGCAACCATGGTCTCCAGCAGCAGCGGCCTCGCCGCCGCCCGCCTGTTGTCGCGCACCTTCCTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064740.9 ENSMUST00000123159.8 ENSMUST00000203632.2 |
||
| CDS TCA 90 bp | CTGCATGGCCCATCCTTCTGCCAGGAGGAGCAGTTATACCAGCAATaGAGGACACTACAGGCTTGGCCTTTGGACCTGAGTTATGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LHGPSFCQEEQLYQQ*RTLQAWPLDLSYAP Trigger: AGGAGCATAACTCAGGTCCAAAGGCCAAGCCTGTAGTGTCCTTCATTGCTGGTATAACTGCTCCTCCTGGCAGAAGGATGGGCCATGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS GCA 90 bp | AGCAGAGATCTTCTCTTTAGCGCCACCTTTTCCTCCAGCAATAATTaGCCCTGCATGGCCCATCCTTCTGCCAGGAGGAGCAGTTATACC | + |
|
Preference number: 5 (lower is better) Translates to: SRDLLFSATFSSSNN*PCMAHPSARRSSYT Trigger: GGTATAACTGCTCCTCCTGGCAGAAGGATGGGCCATGCAGGGGCAATTATTGCTGGAGGAAAAGGTGGCGCTAAAGAGAAGATCTCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS TCA 90 bp | GTCAGAGTACCGGACCTGGACACGATACCTATTCTTCCCTTCTTGTaGATGTGGCCAGGCATGATGCCGATTTTGCATTCTCCAGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VRVPDLDTIPILPFL*MWPGMMPILHSPGL Trigger: CAACCCTGGAGAATGCAAAATCGGCATCATGCCTGGCCACATTCACAAGAAGGGAAGAATAGGTATCGTGTCCAGGTCCGGTACTCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS GCA 90 bp | GATCTTCTCTTTAGCGCCACCTTTTCCTCCAGCAATAATTGCCCCTaGATGGCCCATCCTTCTGCCAGGAGGAGCAGTTATACCAGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: DLLFSATFSSSNNCP*MAHPSARRSSYTSN Trigger: ATTGCTGGTATAACTGCTCCTCCTGGCAGAAGGATGGGCCATGCAGGGGCAATTATTGCTGGAGGAAAAGGTGGCGCTAAAGAGAAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS CCA 90 bp | TTCTCTTTAGCGCCACCTTTTCCTCCAGCAATAATTGCCCCTGCATaGCCCATCCTTCTGCCAGGAGGAGCAGTTATACCAGCAATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FSLAPPFPPAIIAPA*PILLPGGAVIPAMK Trigger: CTTCATTGCTGGTATAACTGCTCCTCCTGGCAGAAGGATGGGCCATGCAGGGGCAATTATTGCTGGAGGAAAAGGTGGCGCTAAAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS-3UTR CAA 90 bp | GACAGCCTGGACTGGCCCTCACGTCTAGATTTCTTCCACAGCTTTAAAGAATTTCGTGTCAGTCTGTGCTaGACCCGCACCATATCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: DSLDWPSRLDFFHSFKEFRVSLC*TRTISC Trigger: GCAGGATATGGTGCGGGTCAAGCACAGACTGACACG...AAATTCTTTAAAGCTGTGGAAGAAATCTAGACGTGAGGGCCAGTCCAGGCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS-3UTR CAA 90 bp | GACAGCCTGGACTGGCCCTCACGTCTAGATTTCTTCCACAGCTTTAAAGAATTTTCGTATCCCATTCTGTaGCAGGAGGAAGGTGCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: DSLDWPSRLDFFHSFKEFSYPIL*QEEGAR Trigger: TCGCGCACCTTCCTCCTGCAACAGAATGGGATACGA...AAATTCTTTAAAGCTGTGGAAGAAATCTAGACGTGAGGGCCAGTCCAGGCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS-3UTR CAA 90 bp | CATTCTAAAACTTGCCTGGATTTCCCACATACTGAGAGACCAACCAGTGTCAGCTCGTATCCCATTCTGTaGCAGGAGGAAGGTGCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: HSKTCLDFPHTERPTSVSSYPIL*QEEGAR Trigger: TCGCGCACCTTCCTCCTGCAACAGAATGGGATACGA...GCTGACACTGGTTGGTCTCTCAGTATGTGGGAAATCCAGGCAAGTTTTAGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064740.9 ENSMUST00000203632.2 |
||
| CDS-3UTR CAA 90 bp | GACAGCCTGGACTGGCCCTCACGTCTAGATTTCTTCCACAGCTTTAAAGAATTTCTGCCCCAATCCGACTaGGGTTGTTTGGTGAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: DSLDWPSRLDFFHSFKEFLPQSD*GCLVNC Trigger: GCAGTTCACCAAACAACCCAAGTCGGATTGGGGCAG...AAATTCTTTAAAGCTGTGGAAGAAATCTAGACGTGAGGGCCAGTCCAGGCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS TCA 90 bp | CCTGAGTTATGCTCCTTCAGAAACGCGGCAGCATTTTCTTCAGCGTaGCCACCAATTTCACCAATCAGTATGATGCCTTCTGTGGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PELCSFRNAAAFSSA*PPISPISMMPSVAG Trigger: TCCAGCCACAGAAGGCATCATACTGATTGGTGAAATTGGTGGTCACGCTGAAGAAAATGCTGCCGCGTTTCTGAAGGAGCATAACTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS CCA 90 bp | CTTGGGTTGTTTGGTGAACTGCTTCATAAGTCAGAGTACCGGACCTaGACACGATACCTATTCTTCCCTTCTTGTGAATGTGGCCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LGLFGELLHKSEYRT*TRYLFFPSCECGQA Trigger: TGCCTGGCCACATTCACAAGAAGGGAAGAATAGGTATCGTGTCCAGGTCCGGTACTCTGACTTATGAAGCAGTTCACCAAACAACCCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS TCA 90 bp | CGGCAGCATTTTCTTCAGCGTGACCACCAATTTCACCAATCAGTATaGTGCCTTCTGTGGCTGGATCATTCAGGAAGACTTCAAGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: RQHFLQRDHQFHQSV*CLLWLDHSGRLQGN Trigger: ATTGCCTTGAAGTCTTCCTGAATGATCCAGCCACAGAAGGCATCATACTGATTGGTGAAATTGGTGGTCACGCTGAAGAAAATGCTGCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS-3UTR CAA 90 bp | GACAGCCTGGACTGGCCCTCACGTCTAGATTTCTTCCACAGCTTTAAAGAATTTCCAATCCGACTTGGGTaGTTTGGTGAACTGCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: DSLDWPSRLDFFHSFKEFPIRLG*FGELLH Trigger: ATGAAGCAGTTCACCAAACAACCCAAGTCGGATTGG...AAATTCTTTAAAGCTGTGGAAGAAATCTAGACGTGAGGGCCAGTCCAGGCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS-3UTR CAA 90 bp | TGGCCCTCACGTCTAGATTTCTTCCACAGCTTTAAAGAATTTCTTGTTGTGTCCCTACAGGCTTGGCCTTaGGACCTGAGTTATGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: WPSRLDFFHSFKEFLVVSLQAWP*DLSYAP Trigger: AGGAGCATAACTCAGGTCCAAAGGCCAAGCCTGTAG...GGACACAACAAGAAATTCTTTAAAGCTGTGGAAGAAATCTAGACGTGAGGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS-3UTR CAA 90 bp | CTGGACTGGCCCTCACGTCTAGATTTCTTCCACAGCTTTAAAGAATTTCTTGTTGGCATGATGCCGATTTaGCATTCTCCAGGGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LDWPSRLDFFHSFKEFLVGMMPI*HSPGLM Trigger: CATCAACCCTGGAGAATGCAAAATCGGCATCATGCC...AACAAGAAATTCTTTAAAGCTGTGGAAGAAATCTAGACGTGAGGGCCAGTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS-3UTR CAA 90 bp | CATTCTAAAACTTGCCTGGATTTCCCACATACTGAGAGACCAACCAGTGTCAGCTCCGACTTGGGTTGTTaGGTGAACTGCTTCATAAGT | + |
|
Preference number: 5 (lower is better) Translates to: HSKTCLDFPHTERPTSVSSDLGC*VNCFIS Trigger: ACTTATGAAGCAGTTCACCAAACAACCCAAGTCGGA...GCTGACACTGGTTGGTCTCTCAGTATGTGGGAAATCCAGGCAAGTTTTAGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS-3UTR CAA 90 bp | CTGGACTGGCCCTCACGTCTAGATTTCTTCCACAGCTTTAAAGAATTTCTTGTTAAGGACACTACAGGCTaGGCCTTTGGACCTGAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: LDWPSRLDFFHSFKEFLVKDTTG*AFGPEL Trigger: TAACTCAGGTCCAAAGGCCAAGCCTGTAGTGTCCTT...AACAAGAAATTCTTTAAAGCTGTGGAAGAAATCTAGACGTGAGGGCCAGTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS-3UTR CAA 90 bp | CTGGACTGGCCCTCACGTCTAGATTTCTTCCACAGCTTTAAAGAATTTCTTGTTGCTCCTGTTTTCTCTTaGGCTTCCTTCACAGTATTA | + |
|
Preference number: 5 (lower is better) Translates to: LDWPSRLDFFHSFKEFLVAPVFS*ASFTVL Trigger: TAATACTGTGAAGGAAGCCAAAGAGAAAACAGGAGC...AACAAGAAATTCTTTAAAGCTGTGGAAGAAATCTAGACGTGAGGGCCAGTCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS GCA 72 bp | AGGTGCGCGACAACAGGCGGGCGGCGGCGAGGCCGCTaGTGCTGGAGACCATGGTTGCAGTGGCAGCCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RCATTGGRRRGR*CWRPWLQWQPQ Trigger: CTGCGGCTGCCACTGCAACCATGGTCTCCAGCAGCAGCGGCCTCGCCGCCGCCCGCCTGTTGTCGCGCACCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064740.9 ENSMUST00000123159.8 ENSMUST00000203632.2 |
||
| CDS GCA 72 bp | AGAAGTGGGGTCTGGCGATCTCATGCCGGAGGAAGGTaGGCGACAACAGGCGGGCGGCGGCGAGGCCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RSGVWRSHAGGR*ATTGGRRRGRC Trigger: GCAGCGGCCTCGCCGCCGCCCGCCTGTTGTCGCGCACCTTCCTCCGGCATGAGATCGCCAGACCCCACTTCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123159.8 |
||
| CDS CAA 90 bp | ATGTTTCCGAGAGGCTGTGTAAGACCCGTGTCGTATCCCATTCTGTaGCAGGAGGAAGGTGCGCGACAACAGGCGGGCGGCGGCGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: MFPRGCVRPVSYPIL*QEEGARQQAGGGEA Trigger: GGCCTCGCCGCCGCCCGCCTGTTGTCGCGCACCTTCCTCCTGCAACAGAATGGGATACGACACGGGTCTTACACAGCCTCTCGGAAACAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064740.9 ENSMUST00000203632.2 |
||
| CDS CAA 90 bp | CTGCCAGGAGGAGCAGTTATACCAGCAATGAAGGACACTACAGGCTaGGCCTTTGGACCTGAGTTATGCTCCTTCAGAAACGCGGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LPGGAVIPAMKDTTG*AFGPELCSFRNAAA Trigger: TGCTGCCGCGTTTCTGAAGGAGCATAACTCAGGTCCAAAGGCCAAGCCTGTAGTGTCCTTCATTGCTGGTATAACTGCTCCTCCTGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS GCA 72 bp | TTTAGCGCCACCTTTTCCTCCAGCAATAATTGCCCCTaGATGGCCCATCCTTCTGCCAGGAGGAGCAGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: FSATFSSSNNCP*MAHPSARRSSY Trigger: ATAACTGCTCCTCCTGGCAGAAGGATGGGCCATGCAGGGGCAATTATTGCTGGAGGAAAAGGTGGCGCTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS CAA 90 bp | CACCTCCAATGCCAATACACAAGGACTGCCCCAATCCGACTTGGGTaGTTTGGTGAACTGCTTCATAAGTCAGAGTACCGGACCTGGACA | + |
|
Preference number: 6 (lower is better) Translates to: HLQCQYTRTAPIRLG*FGELLHKSEYRTWT Trigger: TGTCCAGGTCCGGTACTCTGACTTATGAAGCAGTTCACCAAACAACCCAAGTCGGATTGGGGCAGTCCTTGTGTATTGGCATTGGAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS CAA 90 bp | AGGGTCACCTCCAATGCCAATACACAAGGACTGCCCCAATCCGACTaGGGTTGTTTGGTGAACTGCTTCATAAGTCAGAGTACCGGACCT | + |
|
Preference number: 6 (lower is better) Translates to: RVTSNANTQGLPQSD*GCLVNCFISQSTGP Trigger: AGGTCCGGTACTCTGACTTATGAAGCAGTTCACCAAACAACCCAAGTCGGATTGGGGCAGTCCTTGTGTATTGGCATTGGAGGTGACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS CAA 90 bp | TCCAATGCCAATACACAAGGACTGCCCCAATCCGACTTGGGTTGTTaGGTGAACTGCTTCATAAGTCAGAGTACCGGACCTGGACACGAT | + |
|
Preference number: 6 (lower is better) Translates to: SNANTQGLPQSDLGC*VNCFISQSTGPGHD Trigger: ATCGTGTCCAGGTCCGGTACTCTGACTTATGAAGCAGTTCACCAAACAACCCAAGTCGGATTGGGGCAGTCCTTGTGTATTGGCATTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS TCA 72 bp | CCGGACCTGGACACGATACCTATTCTTCCCTTCTTGTaGATGTGGCCAGGCATGATGCCGATTTTGCATTCT | + |
|
Preference number: 6 (lower is better) Translates to: PDLDTIPILPFL*MWPGMMPILHS Trigger: AGAATGCAAAATCGGCATCATGCCTGGCCACATTCACAAGAAGGGAAGAATAGGTATCGTGTCCAGGTCCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS CAA 72 bp | TGCCAATACACAAGGACTGCCCCAATCCGACTTGGGTaGTTTGGTGAACTGCTTCATAAGTCAGAGTACCGG | + |
|
Preference number: 6 (lower is better) Translates to: CQYTRTAPIRLG*FGELLHKSEYR Trigger: CCGGTACTCTGACTTATGAAGCAGTTCACCAAACAACCCAAGTCGGATTGGGGCAGTCCTTGTGTATTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS CAA 72 bp | AATACACAAGGACTGCCCCAATCCGACTTGGGTTGTTaGGTGAACTGCTTCATAAGTCAGAGTACCGGACCT | + |
|
Preference number: 6 (lower is better) Translates to: NTQGLPQSDLGC*VNCFISQSTGP Trigger: AGGTCCGGTACTCTGACTTATGAAGCAGTTCACCAAACAACCCAAGTCGGATTGGGGCAGTCCTTGTGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS CAA 72 bp | GGAGCAGTTATACCAGCAATGAAGGACACTACAGGCTaGGCCTTTGGACCTGAGTTATGCTCCTTCAGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: GAVIPAMKDTTG*AFGPELCSFRN Trigger: GTTTCTGAAGGAGCATAACTCAGGTCCAAAGGCCAAGCCTGTAGTGTCCTTCATTGCTGGTATAACTGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS TCA 72 bp | TGCTCCTTCAGAAACGCGGCAGCATTTTCTTCAGCGTaGCCACCAATTTCACCAATCAGTATGATGCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CSFRNAAAFSSA*PPISPISMMPS Trigger: AGAAGGCATCATACTGATTGGTGAAATTGGTGGTCACGCTGAAGAAAATGCTGCCGCGTTTCTGAAGGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS CAA 72 bp | TCCAATGCCAATACACAAGGACTGCCCCAATCCGACTaGGGTTGTTTGGTGAACTGCTTCATAAGTCAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: SNANTQGLPQSD*GCLVNCFISQS Trigger: ACTCTGACTTATGAAGCAGTTCACCAAACAACCCAAGTCGGATTGGGGCAGTCCTTGTGTATTGGCATTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS TCA 72 bp | TTTCTTCAGCGTGACCACCAATTTCACCAATCAGTATaGTGCCTTCTGTGGCTGGATCATTCAGGAAGACTT | + |
|
Preference number: 6 (lower is better) Translates to: FLQRDHQFHQSV*CLLWLDHSGRL Trigger: AAGTCTTCCTGAATGATCCAGCCACAGAAGGCATCATACTGATTGGTGAAATTGGTGGTCACGCTGAAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS CCA 72 bp | TTTGGTGAACTGCTTCATAAGTCAGAGTACCGGACCTaGACACGATACCTATTCTTCCCTTCTTGTGAATGT | + |
|
Preference number: 6 (lower is better) Translates to: FGELLHKSEYRT*TRYLFFPSCEC Trigger: ACATTCACAAGAAGGGAAGAATAGGTATCGTGTCCAGGTCCGGTACTCTGACTTATGAAGCAGTTCACCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||
| CDS CCA 72 bp | ACCAATTTCACCAATCAGTATGATGCCTTCTGTGGCTaGATCATTCAGGAAGACTTCAAGGCAATCAATAAA | + |
|
Preference number: 6 (lower is better) Translates to: TNFTNQYDAFCG*IIQEDFKAINK Trigger: TTTATTGATTGCCTTGAAGTCTTCCTGAATGATCCAGCCACAGAAGGCATCATACTGATTGGTGAAATTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064740.9 |
||