Pregenerated sensors for STYXL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019178Ensembl transcript IDs: ENSMUST00000053906.11, ENSMUST00000111161.9, ENSMUST00000111162.8, ENSMUST00000111163.9, ENSMUST00000111164.9, ENSMUST00000142343.8, ENSMUST00000177559.8, ENSMUST00000178515.8, ENSMUST00000178796.2
Found 162 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCACTCCAGCAGCTGAGCCACGAAGGCCCGATTCGGACGCATGTTaGTTTTGCATTTCTTCACTTGGGCCCAGGACCTCTTCAGCGTCT | + |
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Preference number: 1 (lower is better) Translates to: PTPAAEPRRPDSDAC*FCISSLGPRTSSAS Trigger: AGACGCTGAAGAGGTCCTGGGCCCAAGTGAAGAAATGCAAAACCAACATGCGTCCGAATCGGGCCTTCGTGGCTCAGCTGCTGGAGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142343.8 |
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| 3UTR GCA 90 bp | TATGAACCTCCAGGCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTaGAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACCAAGACTCC | + |
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Preference number: 1 (lower is better) Translates to: YEPPGSKGLLQDHSK*KPSSPVPQSPNQDS Trigger: GGAGTCTTGGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGCCTGGAGGTTCATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| 3UTR GCA 90 bp | CCAGCAGCTGAGCCACGAAGGCCCGATTCGGACGCATGTTGGTTTTaGATTTCTTCACTTGGGCCCAGGACCTCTTCAGCGTCTCCTCAT | + |
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Preference number: 1 (lower is better) Translates to: PAAEPRRPDSDACWF*ISSLGPRTSSASPH Trigger: ATGAGGAGACGCTGAAGAGGTCCTGGGCCCAAGTGAAGAAATGCAAAACCAACATGCGTCCGAATCGGGCCTTCGTGGCTCAGCTGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142343.8 |
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| 3UTR TCA 90 bp | CCCAGTCCTCATTCACCGTCCTGCGGCTCAGGACAGGTCACCACATaGGAAACTGTATTAAAGGGTCGCAGTGTTAGGAAGGTTGAGAAC | + |
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Preference number: 1 (lower is better) Translates to: PSPHSPSCGSGQVTT*ETVLKGRSVRKVEN Trigger: GTTCTCAACCTTCCTAACACTGCGACCCTTTAATACAGTTTCTCATGTGGTGACCTGTCCTGAGCCGCAGGACGGTGAATGAGGACTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053906.11 ENSMUST00000178515.8 |
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| 3UTR CCA 90 bp | AGCAACCTGTTCTGTTCTTTCTGTACCCAGCCAATATCCTGCTTTTaGGAACAGGTGCATTCCCCCAGAAACAAAGTGACTCTACGTCAT | + |
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Preference number: 1 (lower is better) Translates to: SNLFCSFCTQPISCF*EQVHSPRNKVTLRH Trigger: ATGACGTAGAGTCACTTTGTTTCTGGGGGAATGCACCTGTTCCCAAAAGCAGGATATTGGCTGGGTACAGAAAGAACAGAACAGGTTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053906.11 ENSMUST00000178515.8 |
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| 3UTR GCA 90 bp | GAAACTGTATTAAAGGGTCGCAGTGTTAGGAAGGTTGAGAACCACTaGTCTAGCTTCAATCCTCAGTATTGGAGAAAAACAACAACAACA | + |
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Preference number: 1 (lower is better) Translates to: ETVLKGRSVRKVENH*SSFNPQYWRKTTTT Trigger: TGTTGTTGTTGTTTTTCTCCAATACTGAGGATTGAAGCTAGAGCAGTGGTTCTCAACCTTCCTAACACTGCGACCCTTTAATACAGTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053906.11 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| 3UTR CAA 90 bp | CACGAAGGCCCGATTCGGACGCATGTTGGTTTTGCATTTCTTCACTaGGGCCCAGGACCTCTTCAGCGTCTCCTCATTATAATGCATGAG | + |
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Preference number: 2 (lower is better) Translates to: HEGPIRTHVGFAFLH*GPGPLQRLLIIMHE Trigger: CTCATGCATTATAATGAGGAGACGCTGAAGAGGTCCTGGGCCCAAGTGAAGAAATGCAAAACCAACATGCGTCCGAATCGGGCCTTCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142343.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTTAGGAAGGTTGAGAACCACTGCTCTAGCTTCAATCCTCAGTATTGGAGAACAGGACCACTCCAAGTaGAAACCCAGCTCCCCAGTC | + |
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Preference number: 2 (lower is better) Translates to: VLGRLRTTALASILSIGEQDHSK*KPSSPV Trigger: GACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTG...TTCTCCAATACTGAGGATTGAAGCTAGAGCAGTGGTTCTCAACCTTCCTAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053906.11 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| 3UTR-3UTR GCA 90 bp | AGGTACCTAGCAACCTGTTCTGTTCTTTCTGTACCCAGCCAATATCCTGCTTTTAAGGTTGAGAACCACTaGTCTAGCTTCAATCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: RYLATCSVLSVPSQYPAFKVENH*SSFNPQ Trigger: CTGAGGATTGAAGCTAGAGCAGTGGTTCTCAACCTT...AAAAGCAGGATATTGGCTGGGTACAGAAAGAACAGAACAGGTTGCTAGGTACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053906.11 ENSMUST00000178515.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAAACAAAGTGACTCTACGTCATCCCCCTCCCCATATCATGCTTCTATTTGGTTGCTGTCCGTTCTTTaGGTTTCTTGTTTCCCCATT | + |
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Preference number: 2 (lower is better) Translates to: QKQSDSTSSPSPYHASIWLLSVL*VSCFPI Trigger: AATGGGGAAACAAGAAACGCAAAGAACGGACAGCAA...CCAAATAGAAGCATGATATGGGGAGGGGGATGACGTAGAGTCACTTTGTTTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053906.11 ENSMUST00000178515.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGTACCTAGCAACCTGTTCTGTTCTTTCTGTACCCAGCCAATATCCTGCTTTCCCCTCCCCATATCATaGTTCTATTTGGGTATGAAA | + |
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Preference number: 2 (lower is better) Translates to: QVPSNLFCSFCTQPISCFPLPIS*FYLGMK Trigger: TTTCATACCCAAATAGAAGCATGATATGGGGAGGGG...AAAGCAGGATATTGGCTGGGTACAGAAAGAACAGAACAGGTTGCTAGGTACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053906.11 ENSMUST00000178515.8 |
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| 3UTR GCA 72 bp | GAGCCACGAAGGCCCGATTCGGACGCATGTTGGTTTTaGATTTCTTCACTTGGGCCCAGGACCTCTTCAGCG | + |
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Preference number: 3 (lower is better) Translates to: EPRRPDSDACWF*ISSLGPRTSSA Trigger: CGCTGAAGAGGTCCTGGGCCCAAGTGAAGAAATGCAAAACCAACATGCGTCCGAATCGGGCCTTCGTGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142343.8 |
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| 3UTR CCA 72 bp | GCAGCTGAGCCACGAAGGCCCGATTCGGACGCATGTTaGTTTTGCATTTCTTCACTTGGGCCCAGGACCTCT | + |
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Preference number: 3 (lower is better) Translates to: AAEPRRPDSDAC*FCISSLGPRTS Trigger: AGAGGTCCTGGGCCCAAGTGAAGAAATGCAAAACCAACATGCGTCCGAATCGGGCCTTCGTGGCTCAGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142343.8 |
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| 3UTR TCA 72 bp | CATTCACCGTCCTGCGGCTCAGGACAGGTCACCACATaGGAAACTGTATTAAAGGGTCGCAGTGTTAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: HSPSCGSGQVTT*ETVLKGRSVRK Trigger: CTTCCTAACACTGCGACCCTTTAATACAGTTTCTCATGTGGTGACCTGTCCTGAGCCGCAGGACGGTGAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053906.11 ENSMUST00000178515.8 |
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| 3UTR-3UTR CAA 90 bp | CCCGATTCGGACGCATGTTGGTTTTGCATTTCTTCACTTGGGCCCAGGACCTCTGGAGAATCCTCAAGCTaGATATGTAAGAGCTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: PDSDACWFCISSLGPRTSGESSS*ICKSLS Trigger: AGACAAGCTCTTACATATCAAGCTTGAGGATTCTCC...AGAGGTCCTGGGCCCAAGTGAAGAAATGCAAAACCAACATGCGTCCGAATCGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142343.8 |
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| 3UTR TCA 72 bp | AACAACAACAACAGAACCAGCCTTAAGATGCAGATATaGACCTCCAGGCAGCAAAGGTCTTCTCCAGGACCA | + |
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Preference number: 3 (lower is better) Translates to: NNNNRTSLKMQI*TSRQQRSSPGP Trigger: TGGTCCTGGAGAAGACCTTTGCTGCCTGGAGGTTCATATCTGCATCTTAAGGCTGGTTCTGTTGTTGTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| 3UTR GCA 72 bp | AACCTGTTCTGTTCTTTCTGTACCCAGCCAATATCCTaGTTTTGGGAACAGGTGCATTCCCCCAGAAACAAA | + |
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Preference number: 3 (lower is better) Translates to: NLFCSFCTQPIS*FWEQVHSPRNK Trigger: TTTGTTTCTGGGGGAATGCACCTGTTCCCAAAAGCAGGATATTGGCTGGGTACAGAAAGAACAGAACAGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053906.11 ENSMUST00000178515.8 |
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| 3UTR CCA 72 bp | TTCTGTTCTTTCTGTACCCAGCCAATATCCTGCTTTTaGGAACAGGTGCATTCCCCCAGAAACAAAGTGACT | + |
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Preference number: 3 (lower is better) Translates to: FCSFCTQPISCF*EQVHSPRNKVT Trigger: AGTCACTTTGTTTCTGGGGGAATGCACCTGTTCCCAAAAGCAGGATATTGGCTGGGTACAGAAAGAACAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053906.11 ENSMUST00000178515.8 |
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| 3UTR GCA 72 bp | TTAAAGGGTCGCAGTGTTAGGAAGGTTGAGAACCACTaGTCTAGCTTCAATCCTCAGTATTGGAGAAAAACA | + |
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Preference number: 3 (lower is better) Translates to: LKGRSVRKVENH*SSFNPQYWRKT Trigger: TGTTTTTCTCCAATACTGAGGATTGAAGCTAGAGCAGTGGTTCTCAACCTTCCTAACACTGCGACCCTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053906.11 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR GCA 90 bp | TCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACCCCAGCTGCCGCCGTATaGACAGCTCCAGGGAACTGG | + |
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Preference number: 4 (lower is better) Translates to: SRTTPSANPAPQSPKVPTPAAAV*TAPGNW Trigger: CCAGTTCCCTGGAGCTGTGCATACGGCGGCAGCTGG...GGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 |
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| CDS-3UTR GCA 90 bp | CTCCAGGCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCCAGCTGCCGCCGTATaGACAGCTCCAGGGAACTGG | + |
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Preference number: 4 (lower is better) Translates to: LQAAKVFSRTTPSANPAPPAAAV*TAPGNW Trigger: CCAGTTCCCTGGAGCTGTGCATACGGCGGCAGCTGG...GGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGCCTGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 |
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| CDS-3UTR GCA 90 bp | CAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACCAACCAGCTGCCGCCGTATaGACAGCTCCAGGGAACTGG | + |
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Preference number: 4 (lower is better) Translates to: QDHSKCKPSSPVPQSPNQPAAAV*TAPGNW Trigger: CCAGTTCCCTGGAGCTGTGCATACGGCGGCAGCTGG...TTGGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 |
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| CDS-3UTR GCA 90 bp | GCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCTCCTCCTCCTCCAGCTaGCGCCGTATGCACAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: AAKVFSRTTPSANPAPQSSSSSS*RRMHSS Trigger: GGAGCTGTGCATACGGCGGCAGCTGGAGGAGGAGGA...GGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 |
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| CDS-3UTR GCA 90 bp | AACCTCCAGGCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTTCCTCCTCCTCCAGCTaGCGCCGTATGCACAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: NLQAAKVFSRTTPSANPASSSSS*RRMHSS Trigger: GGAGCTGTGCATACGGCGGCAGCTGGAGGAGGAGGA...AGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGCCTGGAGGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 |
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| CDS-3UTR TCA 90 bp | CCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACCAGCTCGGAGATGTCTGTaGGATATTCCCCATGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: PGPLQVQTQLPSPPKSQPARRCL*DIPHGG Trigger: TCCTCCATGGGGAATATCTCACAGACATCTCCGAGC...TGGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR TCA 90 bp | GCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCGCTCGGAGATGTCTGTaGGATATTCCCCATGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: AKVFSRTTPSANPAPQSPARRCL*DIPHGG Trigger: TCCTCCATGGGGAATATCTCACAGACATCTCCGAGC...GGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR CCA 90 bp | GCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCTCAACTGGGTATGGCTaGAAGGCATCCAGTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: AKVFSRTTPSANPAPQSPSTGYG*KASSSW Trigger: CCAGGAACTGGATGCCTTCCAGCCATACCCAGTTGA...GGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR TCA 90 bp | CAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACCAAGCTCGGAGATGTCTGTaGGATATTCCCCATGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: QDHSKCKPSSPVPQSPNQARRCL*DIPHGG Trigger: TCCTCCATGGGGAATATCTCACAGACATCTCCGAGC...TTGGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR CCA 90 bp | CTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAGGGCAGTGATCACATaGCTCTCGTCATACTGTCGT | + |
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Preference number: 4 (lower is better) Translates to: LLQDHSKCKPSSPVPQSPRAVIT*LSSYCR Trigger: ACGACAGTATGACGAGAGCCATGTGATCACTGCCCT...GGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 |
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| CDS-3UTR CCA 90 bp | CAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACCAATCAACTGGGTATGGCTaGAAGGCATCCAGTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: QDHSKCKPSSPVPQSPNQSTGYG*KASSSW Trigger: CCAGGAACTGGATGCCTTCCAGCCATACCCAGTTGA...TTGGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR CCA 90 bp | AGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCAACTGGGTATGGCTaGAAGGCATCCAGTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: RSSPGPLQVQTQLPSPPKSTGYG*KASSSW Trigger: CCAGGAACTGGATGCCTTCCAGCCATACCCAGTTGA...CTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR CCA 90 bp | CAGGCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCAACTGGGTATGGCTaGAAGGCATCCAGTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: QAAKVFSRTTPSANPAPQSTGYG*KASSSW Trigger: CCAGGAACTGGATGCCTTCCAGCCATACCCAGTTGA...CTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR CCA 90 bp | GCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCGTGAGATATTCCCCATaGAGGACTTTCTCCCACTCC | + |
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Preference number: 4 (lower is better) Translates to: AKVFSRTTPSANPAPQSPVRYSP*RTFSHS Trigger: GGAGTGGGAGAAAGTCCTCCATGGGGAATATCTCAC...GGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR TCA 90 bp | AAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGCTCGGAGATGTCTGTaGGATATTCCCCATGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: KVFSRTTPSANPAPQSPKARRCL*DIPHGG Trigger: TCCTCCATGGGGAATATCTCACAGACATCTCCGAGC...TTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR TCA 90 bp | CCAGTCCCCCAAAGTCCCAACCAAGACTCCTCAGTGACCATAGCTGCGTTCCAGGCTCGGAGATGTCTGTaGGATATTCCCCATGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: PVPQSPNQDSSVTIAAFQARRCL*DIPHGG Trigger: TCCTCCATGGGGAATATCTCACAGACATCTCCGAGC...CTGGAACGCAGCTATGGTCACTGAGGAGTCTTGGTTGGGACTTTGGGGGACTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR GCA 90 bp | AGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACCAAGTGCCCAGGTAGACTCTaGCTGGAAGTATCTCAACTG | + |
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Preference number: 4 (lower is better) Translates to: RTTPSANPAPQSPKVPTKCPGRL*LEVSQL Trigger: CAGTTGAGATACTTCCAGGCAGAGTCTACCTGGGCA...CTTGGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR GCA 90 bp | CAGGCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTGCCCAGGTAGACTCTaGCTGGAAGTATCTCAACTG | + |
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Preference number: 4 (lower is better) Translates to: QAAKVFSRTTPSANPAPQCPGRL*LEVSQL Trigger: CAGTTGAGATACTTCCAGGCAGAGTCTACCTGGGCA...CTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR GCA 90 bp | CAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACCAATGCCCAGGTAGACTCTaGCTGGAAGTATCTCAACTG | + |
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Preference number: 4 (lower is better) Translates to: QDHSKCKPSSPVPQSPNQCPGRL*LEVSQL Trigger: CAGTTGAGATACTTCCAGGCAGAGTCTACCTGGGCA...TTGGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR GCA 90 bp | GACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACCAAGACTGCCCAGGTAGACTCTaGCTGGAAGTATCTCAACTG | + |
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Preference number: 4 (lower is better) Translates to: DHSKCKPSSPVPQSPNQDCPGRL*LEVSQL Trigger: CAGTTGAGATACTTCCAGGCAGAGTCTACCTGGGCA...GTCTTGGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR GCA 90 bp | CCAGGCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCATGCCCAGGTAGACTCTaGCTGGAAGTATCTCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: PGSKGLLQDHSKCKPSSPCPGRL*LEVSQL Trigger: CAGTTGAGATACTTCCAGGCAGAGTCTACCTGGGCA...TGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTAGGGCAGTGATCACATaGCTCTCGTCATACTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GLLQDHSKCKPSSPVPQSRAVIT*LSSYCR Trigger: ACGACAGTATGACGAGAGCCATGTGATCACTGCCCT...ACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCAGGCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCAGGGCAGTGATCACATaGCTCTCGTCATACTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PPGSKGLLQDHSKCKPSSRAVIT*LSSYCR Trigger: ACGACAGTATGACGAGAGCCATGTGATCACTGCCCT...GGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGCCTGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 |
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| CDS-3UTR CCA 90 bp | AAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAATCAACTGGGTATGGCTaGAAGGCATCCAGTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KGLLQDHSKCKPSSPVPQSTGYG*KASSSW Trigger: CCAGGAACTGGATGCCTTCCAGCCATACCCAGTTGA...TTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCTATCTCAACTGGGTATaGCTGGAAGGCATCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AKVFSRTTPSANPAPQSPYLNWV*LEGIQF Trigger: GAACTGGATGCCTTCCAGCCATACCCAGTTGAGATA...GGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCTGGAAGTATCTCAACTaGGTATGGCTGGAAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LLQDHSKCKPSSPVPQSPWKYLN*VWLEGI Trigger: GATGCCTTCCAGCCATACCCAGTTGAGATACTTCCA...GGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCAGCAACGCTGCGGCTGATGCCCCGGGTGGAAAAGACCAGAACGACAGAGTGGAAGTATCTCAACTaGGTATGGCTGGAAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: TAATLRLMPRVEKTRTTEWKYLN*VWLEGI Trigger: GATGCCTTCCAGCCATACCCAGTTGAGATACTTCCA...CTCTGTCGTTCTGGTCTTTTCCACCCGGGGCATCAGCCGCAGCGTTGCTGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142343.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACCTGGAAGTATCTCAACTaGGTATGGCTGGAAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SRTTPSANPAPQSPKVPTWKYLN*VWLEGI Trigger: GATGCCTTCCAGCCATACCCAGTTGAGATACTTCCA...GGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCATTGCATTTCTTCACTTaGGCCCAGGACCTCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGSKGLLQDHSKCKPSSPLHFFT*AQDLFS Trigger: GCTGAAGAGGTCCTGGGCCCAAGTGAAGAAATGCAA...TGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR CCA 90 bp | TCCAGGCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCGTGAGATATTCCCCATaGAGGACTTTCTCCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRQQRSSPGPLQVQTQLPVRYSP*RTFSHS Trigger: GGAGTGGGAGAAAGTCCTCCATGGGGAATATCTCAC...GGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGCCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR CCA 90 bp | CAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAGTGAGATATTCCCCATaGAGGACTTTCTCCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRSSPGPLQVQTQLPSPPVRYSP*RTFSHS Trigger: GGAGTGGGAGAAAGTCCTCCATGGGGAATATCTCAC...TGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR TCA 90 bp | TCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCATCCAGATGATCTTCTaGGTCCGGAAGAAGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SSPGPLQVQTQLPSPPKSIQMIF*VRKKWY Trigger: GTACCACTTCTTCCGGACTCAGAAGATCATCTGGAT...GGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR GCA 90 bp | TCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCGACGCATGTTGGTTTTaGATTTCTTCACTTGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSPGPLQVQTQLPSPPKSDACWF*ISSLGP Trigger: GGGCCCAAGTGAAGAAATGCAAAACCAACATGCGTC...GGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR GCA 90 bp | CCAGGCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGACGCATGTTGGTTTTaGATTTCTTCACTTGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PGSKGLLQDHSKCKPSSPDACWF*ISSLGP Trigger: GGGCCCAAGTGAAGAAATGCAAAACCAACATGCGTC...TGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR GCA 90 bp | GACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACCAAGACGACGCATGTTGGTTTTaGATTTCTTCACTTGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DHSKCKPSSPVPQSPNQDDACWF*ISSLGP Trigger: GGGCCCAAGTGAAGAAATGCAAAACCAACATGCGTC...GTCTTGGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR GCA 90 bp | GGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACCAAGAGACGCATGTTGGTTTTaGATTTCTTCACTTGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GPLQVQTQLPSPPKSQPRDACWF*ISSLGP Trigger: GGGCCCAAGTGAAGAAATGCAAAACCAACATGCGTC...TCTTGGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CCA 90 bp | AGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACCAAGGTAAACAGAGGTAGTTaGGCTCAGCCAATCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: RTTPSANPAPQSPKVPTKVNRGS*AQPIWT Trigger: TGTCCAGATTGGCTGAGCCCAACTACCTCTGTTTAC...CTTGGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 |
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| CDS-3UTR CCA 90 bp | CAGGCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGGTAAACAGAGGTAGTTaGGCTCAGCCAATCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: QAAKVFSRTTPSANPAPQVNRGS*AQPIWT Trigger: TGTCCAGATTGGCTGAGCCCAACTACCTCTGTTTAC...CTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 |
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| CDS-3UTR CCA 90 bp | CCAGTCCCCCAAAGTCCCAACCAAGACTCCTCAGTGACCATAGCTGCGTTCCAGAGGGCAGTGATCACATaGCTCTCGTCATACTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PVPQSPNQDSSVTIAAFQRAVIT*LSSYCR Trigger: ACGACAGTATGACGAGAGCCATGTGATCACTGCCCT...CTGGAACGCAGCTATGGTCACTGAGGAGTCTTGGTTGGGACTTTGGGGGACTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 |
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| CDS-3UTR CCA 90 bp | AACCTCCAGGCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTTCAACTGGGTATGGCTaGAAGGCATCCAGTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NLQAAKVFSRTTPSANPASTGYG*KASSSW Trigger: CCAGGAACTGGATGCCTTCCAGCCATACCCAGTTGA...AGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGCCTGGAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR CCA 90 bp | GGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACCAAGATATCTCAACTGGGTATaGCTGGAAGGCATCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GPLQVQTQLPSPPKSQPRYLNWV*LEGIQF Trigger: GAACTGGATGCCTTCCAGCCATACCCAGTTGAGATA...TCTTGGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR CCA 90 bp | AGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACCAAGTATCTCAACTGGGTATaGCTGGAAGGCATCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RTTPSANPAPQSPKVPTKYLNWV*LEGIQF Trigger: GAACTGGATGCCTTCCAGCCATACCCAGTTGAGATA...CTTGGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR CCA 90 bp | CCTCCAGGCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCTATCTCAACTGGGTATaGCTGGAAGGCATCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PPGSKGLLQDHSKCKPSSYLNWV*LEGIQF Trigger: GAACTGGATGCCTTCCAGCCATACCCAGTTGAGATA...GGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGCCTGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR CCA 90 bp | AGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTGGAAGTATCTCAACTaGGTATGGCTGGAAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: RSSPGPLQVQTQLPSPPKWKYLN*VWLEGI Trigger: GATGCCTTCCAGCCATACCCAGTTGAGATACTTCCA...CTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR CCA 90 bp | CAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCATGGAAGTATCTCAACTaGGTATGGCTGGAAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: QRSSPGPLQVQTQLPSPPWKYLN*VWLEGI Trigger: GATGCCTTCCAGCCATACCCAGTTGAGATACTTCCA...TGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR CCA 90 bp | CAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCTGGAAGTATCTCAACTaGGTATGGCTGGAAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: QQRSSPGPLQVQTQLPSPWKYLN*VWLEGI Trigger: GATGCCTTCCAGCCATACCCAGTTGAGATACTTCCA...GGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR CCA 90 bp | AGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGCAGGTAGACTCTGCCTaGAAGTATCTCAACTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RSSPGPLQVQTQLPSPPKQVDSA*KYLNWV Trigger: TACCCAGTTGAGATACTTCCAGGCAGAGTCTACCTG...CTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR CCA 90 bp | TCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACAGGTAGACTCTGCCTaGAAGTATCTCAACTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SPGPLQVQTQLPSPPKSQQVDSA*KYLNWV Trigger: TACCCAGTTGAGATACTTCCAGGCAGAGTCTACCTG...TTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR CCA 90 bp | CAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACCAACAGGTAGACTCTGCCTaGAAGTATCTCAACTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QDHSKCKPSSPVPQSPNQQVDSA*KYLNWV Trigger: TACCCAGTTGAGATACTTCCAGGCAGAGTCTACCTG...TTGGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCAGGTAGACTCTGCCTaGAAGTATCTCAACTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GLLQDHSKCKPSSPVPQSQVDSA*KYLNWV Trigger: TACCCAGTTGAGATACTTCCAGGCAGAGTCTACCTG...ACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR CCA 90 bp | CCAGTCCCCCAAAGTCCCAACCAAGACTCCTCAGTGACCATAGCTGCGTTCCAGTTGCATTTCTTCACTTaGGCCCAGGACCTCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PVPQSPNQDSSVTIAAFQLHFFT*AQDLFS Trigger: GCTGAAGAGGTCCTGGGCCCAAGTGAAGAAATGCAA...CTGGAACGCAGCTATGGTCACTGAGGAGTCTTGGTTGGGACTTTGGGGGACTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR CCA 90 bp | AAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAATTGCATTTCTTCACTTaGGCCCAGGACCTCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KGLLQDHSKCKPSSPVPQLHFFT*AQDLFS Trigger: GCTGAAGAGGTCCTGGGCCCAAGTGAAGAAATGCAA...TTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTCCCCCAAAGTCCCAACCAAGACTCCTCAGTGACCATAGCTGCGTTCCAGGTGAGATATTCCCCATaGAGGACTTTCTCCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: PVPQSPNQDSSVTIAAFQVRYSP*RTFSHS Trigger: GGAGTGGGAGAAAGTCCTCCATGGGGAATATCTCAC...CTGGAACGCAGCTATGGTCACTGAGGAGTCTTGGTTGGGACTTTGGGGGACTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CCA 90 bp | AAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTGAGATATTCCCCATaGAGGACTTTCTCCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: KVFSRTTPSANPAPQSPKVRYSP*RTFSHS Trigger: GGAGTGGGAGAAAGTCCTCCATGGGGAATATCTCAC...TTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CCA 90 bp | CTCCCCAGTCCCCCAAAGTCCCAACCAAGACTCCTCAGTGACCATAGCTGCGTTGTGAGATATTCCCCATaGAGGACTTTCTCCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPSPPKSQPRLLSDHSCVVRYSP*RTFSHS Trigger: GGAGTGGGAGAAAGTCCTCCATGGGGAATATCTCAC...AACGCAGCTATGGTCACTGAGGAGTCTTGGTTGGGACTTTGGGGGACTGGGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR TCA 90 bp | GCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCGGTTGGCGGGTAAAGTaGATGAGGATTTGTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: AAKVFSRTTPSANPAPQSGWRVK*MRICPN Trigger: ATTTGGACAAATCCTCATTCACTTTACCCGCCAACC...GGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 |
||
| CDS-3UTR TCA 90 bp | CAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACCAAGGTTGGCGGGTAAAGTaGATGAGGATTTGTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QDHSKCKPSSPVPQSPNQGWRVK*MRICPN Trigger: ATTTGGACAAATCCTCATTCACTTTACCCGCCAACC...TTGGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGTCCCCCAAAGTCCCAACCAAGACTCCTCAGTGACCATAGCTGCGTTCCAGACGCATGTTGGTTTTaGATTTCTTCACTTGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PSPPKSQPRLLSDHSCVPDACWF*ISSLGP Trigger: GGGCCCAAGTGAAGAAATGCAAAACCAACATGCGTC...TGGAACGCAGCTATGGTCACTGAGGAGTCTTGGTTGGGACTTTGGGGGACTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCAGGCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAATCTGGACAGCTTaGAGACCTGATTCAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: PPGSKGLLQDHSKCKPSSPIWTA*RPDSRC Trigger: ACATCTTGAATCAGGTCTCCAAGCTGTCCAGATTGG...GGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGCCTGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 |
||
| CDS-3UTR CCA 90 bp | AGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGCCAATCTGGACAGCTTaGAGACCTGATTCAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: RSSPGPLQVQTQLPSPPKPIWTA*RPDSRC Trigger: ACATCTTGAATCAGGTCTCCAAGCTGTCCAGATTGG...CTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGTCCCCCAAAGTCCCAACCAAGACTCCTCAGTGACCATAGCTGCGTTCCAGTAAACAGAGGTAGTTaGGCTCAGCCAATCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PSPPKSQPRLLSDHSCVPVNRGS*AQPIWT Trigger: TGTCCAGATTGGCTGAGCCCAACTACCTCTGTTTAC...TGGAACGCAGCTATGGTCACTGAGGAGTCTTGGTTGGGACTTTGGGGGACTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAATATCTCAACTGGGTATaGCTGGAAGGCATCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KGLLQDHSKCKPSSPVPQYLNWV*LEGIQF Trigger: GAACTGGATGCCTTCCAGCCATACCCAGTTGAGATA...TTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGTCCCCCAAAGTCCCAACCAAGACTCCTCAGTGACCATAGCTGCGTTCCATATCTCAACTGGGTATaGCTGGAAGGCATCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PSPPKSQPRLLSDHSCVPYLNWV*LEGIQF Trigger: GAACTGGATGCCTTCCAGCCATACCCAGTTGAGATA...TGGAACGCAGCTATGGTCACTGAGGAGTCTTGGTTGGGACTTTGGGGGACTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR GCA 90 bp | CCCCAAAGTCCCAACCAAGACTCCTCAGTGACCATAGCTGCGTTCCAGGCAAAGGACGCATGTTGGTTTTaGATTTCTTCACTTGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PQSPNQDSSVTIAAFQAKDACWF*ISSLGP Trigger: GGGCCCAAGTGAAGAAATGCAAAACCAACATGCGTC...CTTTGCCTGGAACGCAGCTATGGTCACTGAGGAGTCTTGGTTGGGACTTTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CCA 90 bp | CTCCCCAGTCCCCCAAAGTCCCAACCAAGACTCCTCAGTGACCATAGCTGCGTTCCAATCTGGACAGCTTaGAGACCTGATTCAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LPSPPKSQPRLLSDHSCVPIWTA*RPDSRC Trigger: ACATCTTGAATCAGGTCTCCAAGCTGTCCAGATTGG...AACGCAGCTATGGTCACTGAGGAGTCTTGGTTGGGACTTTGGGGGACTGGGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 |
||
| CDS-3UTR CCA 90 bp | ACGAAGGCCCGATTCGGACGCATGTTGGTTTTGCATTTCTTCACTTGGGCCCAGAGGGCAGTGATCACATaGCTCTCGTCATACTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: TKARFGRMLVLHFFTWAQRAVIT*LSSYCR Trigger: ACGACAGTATGACGAGAGCCATGTGATCACTGCCCT...CTGGGCCCAAGTGAAGAAATGCAAAACCAACATGCGTCCGAATCGGGCCTTCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142343.8 |
||
| CDS-3UTR CCA 90 bp | CCCCAAAGTCCCAACCAAGACTCCTCAGTGACCATAGCTGCGTTCCAGGCAAAGCAGGTAGACTCTGCCTaGAAGTATCTCAACTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PQSPNQDSSVTIAAFQAKQVDSA*KYLNWV Trigger: TACCCAGTTGAGATACTTCCAGGCAGAGTCTACCTG...CTTTGCCTGGAACGCAGCTATGGTCACTGAGGAGTCTTGGTTGGGACTTTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAAAGCAAGGTGTCTaGAGAATCCTCAAGCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: AKVFSRTTPSANPAPQSPKKQGV*RILKLD Trigger: ATCAAGCTTGAGGATTCTCCAGACACCTTGCTTTTT...GGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACCAGATTCGGACGCATGTTaGTTTTGCATTTCTTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: PGPLQVQTQLPSPPKSQPDSDAC*FCISSL Trigger: AAGTGAAGAAATGCAAAACCAACATGCGTCCGAATC...TGGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCGATTCGGACGCATGTTaGTTTTGCATTTCTTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: AKVFSRTTPSANPAPQSPDSDAC*FCISSL Trigger: AAGTGAAGAAATGCAAAACCAACATGCGTCCGAATC...GGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAAATTTTCAAGTCCTTGTaGATCTTAGCATTGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPGPLQVQTQLPSPPKSQIFKSL*ILALQA Trigger: AGCCTGCAATGCTAAGATGCACAAGGACTTGAAAAT...TTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR GCA 90 bp | GCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCATTTTCAAGTCCTTGTaGATCTTAGCATTGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AAKVFSRTTPSANPAPQSIFKSL*ILALQA Trigger: AGCCTGCAATGCTAAGATGCACAAGGACTTGAAAAT...GGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCATTTTCAAGTCCTTGTaGATCTTAGCATTGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QQRSSPGPLQVQTQLPSPIFKSL*ILALQA Trigger: AGCCTGCAATGCTAAGATGCACAAGGACTTGAAAAT...GGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR GCA 90 bp | AGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACCAAGATTTTCAAGTCCTTGTaGATCTTAGCATTGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RTTPSANPAPQSPKVPTKIFKSL*ILALQA Trigger: AGCCTGCAATGCTAAGATGCACAAGGACTTGAAAAT...CTTGGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR CCA 90 bp | GCAGATATGAACCTCCAGGCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAGTAAACAGAGGTAGTTaGGCTCAGCCAATCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: ADMNLQAAKVFSRTTPSAVNRGS*AQPIWT Trigger: TGTCCAGATTGGCTGAGCCCAACTACCTCTGTTTAC...TGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGCCTGGAGGTTCATATCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 |
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| CDS-3UTR CCA 90 bp | GCAGATATGAACCTCCAGGCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCATATCTCAACTGGGTATaGCTGGAAGGCATCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ADMNLQAAKVFSRTTPSAYLNWV*LEGIQF Trigger: GAACTGGATGCCTTCCAGCCATACCCAGTTGAGATA...TGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGCCTGGAGGTTCATATCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR CCA 90 bp | CAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACCAAAAAAAGCAAGGTGTCTaGAGAATCCTCAAGCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QDHSKCKPSSPVPQSPNQKKQGV*RILKLD Trigger: ATCAAGCTTGAGGATTCTCCAGACACCTTGCTTTTT...TTGGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTG 51% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR CCA 90 bp | CTCCAGGCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCAAAAAGCAAGGTGTCTaGAGAATCCTCAAGCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LQAAKVFSRTTPSANPAPKKQGV*RILKLD Trigger: ATCAAGCTTGAGGATTCTCCAGACACCTTGCTTTTT...GGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGCCTGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR CCA 90 bp | CAGGCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGGATTCGGACGCATGTTaGTTTTGCATTTCTTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: QAAKVFSRTTPSANPAPQDSDAC*FCISSL Trigger: AAGTGAAGAAATGCAAAACCAACATGCGTCCGAATC...CTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CCA 90 bp | CAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACCAAGATTCGGACGCATGTTaGTTTTGCATTTCTTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: QDHSKCKPSSPVPQSPNQDSDAC*FCISSL Trigger: AAGTGAAGAAATGCAAAACCAACATGCGTCCGAATC...TTGGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR TCA 90 bp | CCAAAGTCCCAACCAAGACTCCTCAGTGACCATAGCTGCGTTCCAGGCAAAGGTGGTTGGCGGGTAAAGTaGATGAGGATTTGTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PKSQPRLLSDHSCVPGKGGWRVK*MRICPN Trigger: ATTTGGACAAATCCTCATTCACTTTACCCGCCAACC...ACCTTTGCCTGGAACGCAGCTATGGTCACTGAGGAGTCTTGGTTGGGACTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142343.8 |
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| CDS-3UTR CCA 90 bp | CCAAAGTCCCAACCAAGACTCCTCAGTGACCATAGCTGCGTTCCAGGCAAAGGTCCAATCTGGACAGCTTaGAGACCTGATTCAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: PKSQPRLLSDHSCVPGKGPIWTA*RPDSRC Trigger: ACATCTTGAATCAGGTCTCCAAGCTGTCCAGATTGG...ACCTTTGCCTGGAACGCAGCTATGGTCACTGAGGAGTCTTGGTTGGGACTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142343.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAAAAAGCAAGGTGTCTaGAGAATCCTCAAGCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KGLLQDHSKCKPSSPVPQKKQGV*RILKLD Trigger: ATCAAGCTTGAGGATTCTCCAGACACCTTGCTTTTT...TTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTT 50% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTCCCCCAAAGTCCCAACCAAGACTCCTCAGTGACCATAGCTGCGTTCCAGAAAAAGCAAGGTGTCTaGAGAATCCTCAAGCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PVPQSPNQDSSVTIAAFQKKQGV*RILKLD Trigger: ATCAAGCTTGAGGATTCTCCAGACACCTTGCTTTTT...CTGGAACGCAGCTATGGTCACTGAGGAGTCTTGGTTGGGACTTTGGGGGACTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CCA 90 bp | GCTGTCCGTTCTTTGCGTTTCTTGTTTCCCCATTCTCTTCCAGGTGATTCCCCATTGCATTTCTTCACTTaGGCCCAGGACCTCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AVRSLRFLFPHSLPGDSPLHFFT*AQDLFS Trigger: GCTGAAGAGGTCCTGGGCCCAAGTGAAGAAATGCAA...TGGGGAATCACCTGGAAGAGAATGGGGAAACAAGAAACGCAAAGAACGGACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053906.11 ENSMUST00000178515.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAGATTCGGACGCATGTTaGTTTTGCATTTCTTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: KGLLQDHSKCKPSSPVPQDSDAC*FCISSL Trigger: AAGTGAAGAAATGCAAAACCAACATGCGTCCGAATC...TTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| 3UTR CAA 72 bp | CCGATTCGGACGCATGTTGGTTTTGCATTTCTTCACTaGGGCCCAGGACCTCTTCAGCGTCTCCTCATTATA | + |
|
Preference number: 4 (lower is better) Translates to: PIRTHVGFAFLH*GPGPLQRLLII Trigger: TATAATGAGGAGACGCTGAAGAGGTCCTGGGCCCAAGTGAAGAAATGCAAAACCAACATGCGTCCGAATCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142343.8 |
||
| CDS-3UTR GCA 90 bp | CCCCAAAGTCCCAACCAAGACTCCTCAGTGACCATAGCTGCGTTCCAGGCAAAGATTTTCAAGTCCTTGTaGATCTTAGCATTGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PQSPNQDSSVTIAAFQAKIFKSL*ILALQA Trigger: AGCCTGCAATGCTAAGATGCACAAGGACTTGAAAAT...CTTTGCCTGGAACGCAGCTATGGTCACTGAGGAGTCTTGGTTGGGACTTTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CCA 90 bp | GTCCGTTCTTTGCGTTTCTTGTTTCCCCATTCTCTTCCAGGTGATTCCCCAGTCGTAAACAGAGGTAGTTaGGCTCAGCCAATCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: VRSLRFLFPHSLPGDSPVVNRGS*AQPIWT Trigger: TGTCCAGATTGGCTGAGCCCAACTACCTCTGTTTAC...GACTGGGGAATCACCTGGAAGAGAATGGGGAAACAAGAAACGCAAAGAACGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053906.11 |
||
| CDS-3UTR CCA 90 bp | GCTGTCCGTTCTTTGCGTTTCTTGTTTCCCCATTCTCTTCCAGGTGATTCCCCATGGAAGTATCTCAACTaGGTATGGCTGGAAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: AVRSLRFLFPHSLPGDSPWKYLN*VWLEGI Trigger: GATGCCTTCCAGCCATACCCAGTTGAGATACTTCCA...TGGGGAATCACCTGGAAGAGAATGGGGAAACAAGAAACGCAAAGAACGGACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053906.11 ENSMUST00000178515.8 |
||
| CDS-3UTR CCA 90 bp | AACCTCCAGGCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTGATTCGGACGCATGTTaGTTTTGCATTTCTTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: NLQAAKVFSRTTPSANPADSDAC*FCISSL Trigger: AAGTGAAGAAATGCAAAACCAACATGCGTCCGAATC...AGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGCCTGGAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CCA 90 bp | AGGTACCTAGCAACCTGTTCTGTTCTTTCTGTACCCAGCCAATATCCTGCTTTTTCAACTGGGTATGGCTaGAAGGCATCCAGTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RYLATCSVLSVPSQYPAFSTGYG*KASSSW Trigger: CCAGGAACTGGATGCCTTCCAGCCATACCCAGTTGA...AAAAGCAGGATATTGGCTGGGTACAGAAAGAACAGAACAGGTTGCTAGGTACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053906.11 ENSMUST00000178515.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGAAACAAAGTGACTCTACGTCATCCCCCTCCCCATATCATGCTTCTATTTTTGCATTTCTTCACTTaGGCCCAGGACCTCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PRNKVTLRHPPPHIMLLFLHFFT*AQDLFS Trigger: GCTGAAGAGGTCCTGGGCCCAAGTGAAGAAATGCAA...AAATAGAAGCATGATATGGGGAGGGGGATGACGTAGAGTCACTTTGTTTCTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000053906.11 ENSMUST00000178515.8 |
||
| CDS-3UTR GCA 90 bp | AAAACAACAACAACAGAACCAGCCTTAAGATGCAGATATGAACCTCCAGGCAGCTGCCCAGGTAGACTCTaGCTGGAAGTATCTCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: KTTTTEPALRCRYEPPGSCPGRL*LEVSQL Trigger: CAGTTGAGATACTTCCAGGCAGAGTCTACCTGGGCA...GCTGCCTGGAGGTTCATATCTGCATCTTAAGGCTGGTTCTGTTGTTGTTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| 3UTR CAA 72 bp | GTTCTGTTCTTTCTGTACCCAGCCAATATCCTGCTTTaGGGAACAGGTGCATTCCCCCAGAAACAAAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VLFFLYPANILL*GTGAFPQKQSD Trigger: GTCACTTTGTTTCTGGGGGAATGCACCTGTTCCCAAAAGCAGGATATTGGCTGGGTACAGAAAGAACAGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053906.11 ENSMUST00000178515.8 |
||
| CDS-3UTR GCA 90 bp | GTCCGTTCTTTGCGTTTCTTGTTTCCCCATTCTCTTCCAGGTGATTCCCCAGTCATTTTCAAGTCCTTGTaGATCTTAGCATTGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VRSLRFLFPHSLPGDSPVIFKSL*ILALQA Trigger: AGCCTGCAATGCTAAGATGCACAAGGACTTGAAAAT...GACTGGGGAATCACCTGGAAGAGAATGGGGAAACAAGAAACGCAAAGAACGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053906.11 ENSMUST00000178515.8 |
||
| CDS-3UTR TCA 90 bp | AAAACAACAACAACAGAACCAGCCTTAAGATGCAGATATGAACCTCCAGGCAGCGGTTGGCGGGTAAAGTaGATGAGGATTTGTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KTTTTEPALRCRYEPPGSGWRVK*MRICPN Trigger: ATTTGGACAAATCCTCATTCACTTTACCCGCCAACC...GCTGCCTGGAGGTTCATATCTGCATCTTAAGGCTGGTTCTGTTGTTGTTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000177559.8 |
||
| CDS-3UTR CCA 90 bp | GTTGAGAACCACTGCTCTAGCTTCAATCCTCAGTATTGGAGAAAAACAACAACACAGGTAGACTCTGCCTaGAAGTATCTCAACTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VENHCSSFNPQYWRKTTTQVDSA*KYLNWV Trigger: TACCCAGTTGAGATACTTCCAGGCAGAGTCTACCTG...TGTTGTTGTTTTTCTCCAATACTGAGGATTGAAGCTAGAGCAGTGGTTCTCAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053906.11 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CCA 90 bp | GTTGAGAACCACTGCTCTAGCTTCAATCCTCAGTATTGGAGAAAAACAACAACACCAATCTGGACAGCTTaGAGACCTGATTCAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: VENHCSSFNPQYWRKTTTPIWTA*RPDSRC Trigger: ACATCTTGAATCAGGTCTCCAAGCTGTCCAGATTGG...TGTTGTTGTTTTTCTCCAATACTGAGGATTGAAGCTAGAGCAGTGGTTCTCAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053906.11 ENSMUST00000177559.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAGGTTGAGAACCACTGCTCTAGCTTCAATCCTCAGTATTGGAGAAAAACAAAAAAGCAAGGTGTCTaGAGAATCCTCAAGCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RKVENHCSSFNPQYWRKTKKQGV*RILKLD Trigger: ATCAAGCTTGAGGATTCTCCAGACACCTTGCTTTTT...TGTTTTTCTCCAATACTGAGGATTGAAGCTAGAGCAGTGGTTCTCAACCTTCCT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000053906.11 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS GCA 90 bp | CCTCCTCCAGCTGCCGCCGTATGCACAGCTCCAGGGAACTGGTGTTaGTGTCGTACACGATGCAGTATCTCACACACTCCAGGTCTACGG | + |
|
Preference number: 5 (lower is better) Translates to: PPPAAAVCTAPGNWC*CRTRCSISHTPGLR Trigger: CCGTAGACCTGGAGTGTGTGAGATACTGCATCGTGTACGACAGCAACACCAGTTCCCTGGAGCTGTGCATACGGCGGCAGCTGGAGGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178796.2 |
||
| CDS GCA 90 bp | TTTCTACCTCCTCCTCCTCTTCCTCCTCCTCCAGCTGCCGCCGTATaGACAGCTCCAGGGAACTGGTGTTGCTGTCGTACACGATGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FLPPPPLPPPPAAAV*TAPGNWCCCRTRCS Trigger: ACTGCATCGTGTACGACAGCAACACCAGTTCCCTGGAGCTGTGCATACGGCGGCAGCTGGAGGAGGAGGAAGAGGAGGAGGAGGTAGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178796.2 |
||
| CDS-3UTR CAA 90 bp | AGCTCCCCAGTCCCCCAAAGTCCCAACCAAGACTCCTCAGTGACCATAGCTGCGTCAGTGTCCTCCTCCTaGTCCTCTCTTTCTACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSPVPQSPNQDSSVTIAASVSSS*SSLSTS Trigger: GGAGGTAGAAAGAGAGGACAAGGAGGAGGACACTGA...CGCAGCTATGGTCACTGAGGAGTCTTGGTTGGGACTTTGGGGGACTGGGGAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCAGTGTCCTCCTCCTaGTCCTCTCTTTCTACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QAAKVFSRTTPSANPAPQSVSSS*SSLSTS Trigger: GGAGGTAGAAAGAGAGGACAAGGAGGAGGACACTGA...CTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 |
||
| CDS-3UTR CAA 90 bp | AGCTCCCCAGTCCCCCAAAGTCCCAACCAAGACTCCTCAGTGACCATAGCTGCGTTTGCATTTCTTCACTaGGGCCCAGGACCTCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSPVPQSPNQDSSVTIAAFAFLH*GPGPLQ Trigger: CTGAAGAGGTCCTGGGCCCAAGTGAAGAAATGCAAA...CGCAGCTATGGTCACTGAGGAGTCTTGGTTGGGACTTTGGGGGACTGGGGAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CAA 90 bp | AGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCTTTGCATTTCTTCACTaGGGCCCAGGACCTCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SKGLLQDHSKCKPSSPVPFAFLH*GPGPLQ Trigger: CTGAAGAGGTCCTGGGCCCAAGTGAAGAAATGCAAA...GGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CAA 90 bp | AGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTTTGCATTTCTTCACTaGGGCCCAGGACCTCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RSSPGPLQVQTQLPSPPKFAFLH*GPGPLQ Trigger: CTGAAGAGGTCCTGGGCCCAAGTGAAGAAATGCAAA...CTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CAA 90 bp | CCTCCAGGCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCTTTGCATTTCTTCACTaGGGCCCAGGACCTCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PPGSKGLLQDHSKCKPSSFAFLH*GPGPLQ Trigger: CTGAAGAGGTCCTGGGCCCAAGTGAAGAAATGCAAA...GGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGCCTGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CAA 90 bp | CAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACCAAGGACGCATGTTGGTTTaGCATTTCTTCACTTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QDHSKCKPSSPVPQSPNQGRMLV*HFFTWA Trigger: GGCCCAAGTGAAGAAATGCAAAACCAACATGCGTCC...TTGGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CAA 90 bp | TCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCGGACGCATGTTGGTTTaGCATTTCTTCACTTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSPGPLQVQTQLPSPPKSGRMLV*HFFTWA Trigger: GGCCCAAGTGAAGAAATGCAAAACCAACATGCGTCC...GGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGGACGCATGTTGGTTTaGCATTTCTTCACTTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PGSKGLLQDHSKCKPSSPGRMLV*HFFTWA Trigger: GGCCCAAGTGAAGAAATGCAAAACCAACATGCGTCC...TGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CAA 90 bp | AACCTCCAGGCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTTCAGTGTCCTCCTCCTaGTCCTCTCTTTCTACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NLQAAKVFSRTTPSANPASVSSS*SSLSTS Trigger: GGAGGTAGAAAGAGAGGACAAGGAGGAGGACACTGA...AGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGCCTGGAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 |
||
| CDS-3UTR CAA 90 bp | GAACCTCCAGGCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTTTGCATTTCTTCACTaGGGCCCAGGACCTCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: EPPGSKGLLQDHSKCKPSFAFLH*GPGPLQ Trigger: CTGAAGAGGTCCTGGGCCCAAGTGAAGAAATGCAAA...GCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGCCTGGAGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACCAAAAGTGAATGAGGATTaGTCCAAATTCCACAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PGPLQVQTQLPSPPKSQPKVNED*SKFHSR Trigger: CCTGCTGTGGAATTTGGACAAATCCTCATTCACTTT...TGGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 |
||
| CDS-3UTR CAA 90 bp | CTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACGGAGAATCCTCAAGCTaGATATGTAAGAGCTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LQDHSKCKPSSPVPQSPNGESSS*ICKSLS Trigger: AGACAAGCTCTTACATATCAAGCTTGAGGATTCTCC...GTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAAGTGAATGAGGATTaGTCCAAATTCCACAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QRSSPGPLQVQTQLPSPPKVNED*SKFHSR Trigger: CCTGCTGTGGAATTTGGACAAATCCTCATTCACTTT...TGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 |
||
| CDS-3UTR CAA 90 bp | GGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACCAAGAGGAGAATCCTCAAGCTaGATATGTAAGAGCTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GPLQVQTQLPSPPKSQPRGESSS*ICKSLS Trigger: AGACAAGCTCTTACATATCAAGCTTGAGGATTCTCC...TCTTGGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CAA 90 bp | CAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACCAAGGAGAATCCTCAAGCTaGATATGTAAGAGCTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QDHSKCKPSSPVPQSPNQGESSS*ICKSLS Trigger: AGACAAGCTCTTACATATCAAGCTTGAGGATTCTCC...TTGGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CAA 90 bp | GCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCGGAGAATCCTCAAGCTaGATATGTAAGAGCTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: AAKVFSRTTPSANPAPQSGESSS*ICKSLS Trigger: AGACAAGCTCTTACATATCAAGCTTGAGGATTCTCC...GGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS CCA 90 bp | TTGACTGATTTTGCCCAGGTAGACTCTGCCTGGAAGTATCTCAACTaGGTATGGCTGGAAGGCATCCAGTTCCTGGGGCATCCAGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: LTDFAQVDSAWKYLN*VWLEGIQFLGHPDD Trigger: ATCATCTGGATGCCCCAGGAACTGGATGCCTTCCAGCCATACCCAGTTGAGATACTTCCAGGCAGAGTCTACCTGGGCAAAATCAGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS CCA 90 bp | CTTAGCATTGCAGGCTTGACTGATTTTGCCCAGGTAGACTCTGCCTaGAAGTATCTCAACTGGGTATGGCTGGAAGGCATCCAGTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSIAGLTDFAQVDSA*KYLNWVWLEGIQFL Trigger: CAGGAACTGGATGCCTTCCAGCCATACCCAGTTGAGATACTTCCAGGCAGAGTCTACCTGGGCAAAATCAGTCAAGCCTGCAATGCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CAA 90 bp | GAACCTCCAGGCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAACCCAGCGGAGAATCCTCAAGCTaGATATGTAAGAGCTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: EPPGSKGLLQDHSKCKPSGESSS*ICKSLS Trigger: AGACAAGCTCTTACATATCAAGCTTGAGGATTCTCC...GCTGGGTTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGCCTGGAGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CAA 90 bp | AGCTCCCCAGTCCCCCAAAGTCCCAACCAAGACTCCTCAGTGACCATAGCTGCGTTAATTTTCAAGTCCTaGTGCATCTTAGCATTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSPVPQSPNQDSSVTIAALIFKS*CILALQ Trigger: CTGCAATGCTAAGATGCACAAGGACTTGAAAATTAA...CGCAGCTATGGTCACTGAGGAGTCTTGGTTGGGACTTTGGGGGACTGGGGAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CAA 90 bp | CAGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACCAATTAATTTTCAAGTCCTaGTGCATCTTAGCATTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QDHSKCKPSSPVPQSPNQLIFKS*CILALQ Trigger: CTGCAATGCTAAGATGCACAAGGACTTGAAAATTAA...TTGGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CAA 90 bp | AGGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACCAAGTTAATTTTCAAGTCCTaGTGCATCTTAGCATTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RTTPSANPAPQSPKVPTKLIFKS*CILALQ Trigger: CTGCAATGCTAAGATGCACAAGGACTTGAAAATTAA...CTTGGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CAA 90 bp | GGACCACTCCAAGTGCAAACCCAGCTCCCCAGTCCCCCAAAGTCCCAACCAAGATTAATTTTCAAGTCCTaGTGCATCTTAGCATTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GPLQVQTQLPSPPKSQPRLIFKS*CILALQ Trigger: CTGCAATGCTAAGATGCACAAGGACTTGAAAATTAA...TCTTGGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTGGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CAA 90 bp | AGATATGAACCTCCAGGCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAAGGACGCATGTTGGTTTaGCATTTCTTCACTTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RYEPPGSKGLLQDHSKCKGRMLV*HFFTWA Trigger: GGCCCAAGTGAAGAAATGCAAAACCAACATGCGTCC...TTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGCCTGGAGGTTCATATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS-3UTR CAA 90 bp | CTCCCCAGTCCCCCAAAGTCCCAACCAAGACTCCTCAGTGACCATAGCTGCGTTTTAATTTTCAAGTCCTaGTGCATCTTAGCATTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LPSPPKSQPRLLSDHSCVLIFKS*CILALQ Trigger: CTGCAATGCTAAGATGCACAAGGACTTGAAAATTAA...AACGCAGCTATGGTCACTGAGGAGTCTTGGTTGGGACTTTGGGGGACTGGGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
||
| CDS CCA 90 bp | CATCCAGTAAACAGAGGTAGTTGGGCTCAGCCAATCTGGACAGCTTaGAGACCTGATTCAAGATGTTATAGAGTTCTGTTGGCTCGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: HPVNRGSWAQPIWTA*RPDSRCYRVLLARR Trigger: TCTGCGAGCCAACAGAACTCTATAACATCTTGAATCAGGTCTCCAAGCTGTCCAGATTGGCTGAGCCCAACTACCTCTGTTTACTGGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111162.8 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178796.2 |
||
| CDS-3UTR CAA 90 bp | CAGAAACAAAGTGACTCTACGTCATCCCCCTCCCCATATCATGCTTCTATTTGGGGACGCATGTTGGTTTaGCATTTCTTCACTTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QKQSDSTSSPSPYHASIWGRMLV*HFFTWA Trigger: GGCCCAAGTGAAGAAATGCAAAACCAACATGCGTCC...CCAAATAGAAGCATGATATGGGGAGGGGGATGACGTAGAGTCACTTTGTTTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053906.11 ENSMUST00000178515.8 |
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| CDS-3UTR CAA 90 bp | AAAACAACAACAACAGAACCAGCCTTAAGATGCAGATATGAACCTCCAGGCAGCTTTGCATTTCTTCACTaGGGCCCAGGACCTCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: KTTTTEPALRCRYEPPGSFAFLH*GPGPLQ Trigger: CTGAAGAGGTCCTGGGCCCAAGTGAAGAAATGCAAA...GCTGCCTGGAGGTTCATATCTGCATCTTAAGGCTGGTTCTGTTGTTGTTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR CAA 90 bp | AGATATGAACCTCCAGGCAGCAAAGGTCTTCTCCAGGACCACTCCAAGTGCAAATTAATTTTCAAGTCCTaGTGCATCTTAGCATTGCAG | + |
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Preference number: 5 (lower is better) Translates to: RYEPPGSKGLLQDHSKCKLIFKS*CILALQ Trigger: CTGCAATGCTAAGATGCACAAGGACTTGAAAATTAA...TTTGCACTTGGAGTGGTCCTGGAGAAGACCTTTGCTGCCTGGAGGTTCATATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS-3UTR CAA 90 bp | AGTGTTAGGAAGGTTGAGAACCACTGCTCTAGCTTCAATCCTCAGTATTGGAGAGGAGAATCCTCAAGCTaGATATGTAAGAGCTTGTCT | + |
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Preference number: 5 (lower is better) Translates to: SVRKVENHCSSFNPQYWRGESSS*ICKSLS Trigger: AGACAAGCTCTTACATATCAAGCTTGAGGATTCTCC...TCTCCAATACTGAGGATTGAAGCTAGAGCAGTGGTTCTCAACCTTCCTAACACT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053906.11 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS GCA 72 bp | CCTCCTCCTCTTCCTCCTCCTCCAGCTGCCGCCGTATaGACAGCTCCAGGGAACTGGTGTTGCTGTCGTACA | + |
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Preference number: 6 (lower is better) Translates to: PPPLPPPPAAAV*TAPGNWCCCRT Trigger: TGTACGACAGCAACACCAGTTCCCTGGAGCTGTGCATACGGCGGCAGCTGGAGGAGGAGGAAGAGGAGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178796.2 |
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| CDS CAA 90 bp | TCCTCCTCCAGCTGCCGCCGTATGCACAGCTCCAGGGAACTGGTGTaGCTGTCGTACACGATGCAGTATCTCACACACTCCAGGTCTACG | + |
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Preference number: 6 (lower is better) Translates to: SSSSCRRMHSSRELV*LSYTMQYLTHSRST Trigger: CGTAGACCTGGAGTGTGTGAGATACTGCATCGTGTACGACAGCAACACCAGTTCCCTGGAGCTGTGCATACGGCGGCAGCTGGAGGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178796.2 |
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| CDS GCA 72 bp | GCTGCCGCCGTATGCACAGCTCCAGGGAACTGGTGTTaGTGTCGTACACGATGCAGTATCTCACACACTCCA | + |
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Preference number: 6 (lower is better) Translates to: AAAVCTAPGNWC*CRTRCSISHTP Trigger: TGGAGTGTGTGAGATACTGCATCGTGTACGACAGCAACACCAGTTCCCTGGAGCTGTGCATACGGCGGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178796.2 |
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| CDS CAA 72 bp | AGCTGCCGCCGTATGCACAGCTCCAGGGAACTGGTGTaGCTGTCGTACACGATGCAGTATCTCACACACTCC | + |
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Preference number: 6 (lower is better) Translates to: SCRRMHSSRELV*LSYTMQYLTHS Trigger: GGAGTGTGTGAGATACTGCATCGTGTACGACAGCAACACCAGTTCCCTGGAGCTGTGCATACGGCGGCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178796.2 |
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| CDS GCA 72 bp | ACAGCTCCAGGGAACTGGTGTTGCTGTCGTACACGATaGAGTATCTCACACACTCCAGGTCTACGGACTCCG | + |
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Preference number: 6 (lower is better) Translates to: TAPGNWCCCRTR*SISHTPGLRTP Trigger: CGGAGTCCGTAGACCTGGAGTGTGTGAGATACTGCATCGTGTACGACAGCAACACCAGTTCCCTGGAGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053906.11 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000177559.8 ENSMUST00000178796.2 |
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| CDS CCA 72 bp | TTTGCCCAGGTAGACTCTGCCTGGAAGTATCTCAACTaGGTATGGCTGGAAGGCATCCAGTTCCTGGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: FAQVDSAWKYLN*VWLEGIQFLGH Trigger: ATGCCCCAGGAACTGGATGCCTTCCAGCCATACCCAGTTGAGATACTTCCAGGCAGAGTCTACCTGGGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111161.9 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178515.8 |
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| CDS CCA 72 bp | GTCGTTTTGATCGGACATCCAGTAAACAGAGGTAGTTaGGCTCAGCCAATCTGGACAGCTTGGAGACCTGAT | + |
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Preference number: 6 (lower is better) Translates to: VVLIGHPVNRGS*AQPIWTAWRPD Trigger: ATCAGGTCTCCAAGCTGTCCAGATTGGCTGAGCCCAACTACCTCTGTTTACTGGATGTCCGATCAAAACGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111162.8 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178796.2 |
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| CDS CCA 72 bp | AACAGAGGTAGTTGGGCTCAGCCAATCTGGACAGCTTaGAGACCTGATTCAAGATGTTATAGAGTTCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: NRGSWAQPIWTA*RPDSRCYRVLL Trigger: CAACAGAACTCTATAACATCTTGAATCAGGTCTCCAAGCTGTCCAGATTGGCTGAGCCCAACTACCTCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000053906.11 ENSMUST00000111162.8 ENSMUST00000111163.9 ENSMUST00000111164.9 ENSMUST00000142343.8 ENSMUST00000177559.8 ENSMUST00000178796.2 |
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| CDS CAA 72 bp | GTGTCTGGAGAATCCTCAAGCTTGATATGTAAGAGCTaGTCTGCATTGCCTATAAAACTGGGGCATCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: VSGESSSLICKS*SALPIKLGHPD Trigger: ATCTGGATGCCCCAGTTTTATAGGCAATGCAGACAAGCTCTTACATATCAAGCTTGAGGATTCTCCAGACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111162.8 |
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| CDS CAA 72 bp | GAATCCTCAAGCTTGATATGTAAGAGCTTGTCTGCATaGCCTATAAAACTGGGGCATCCAGATGATCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: ESSSLICKSLSA*PIKLGHPDDLL Trigger: CAGAAGATCATCTGGATGCCCCAGTTTTATAGGCAATGCAGACAAGCTCTTACATATCAAGCTTGAGGATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111162.8 |
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