RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STYX (Mus musculus)

Ensembl gene IDs: ENSMUSG00000053205

Ensembl transcript IDs: ENSMUST00000111835.4, ENSMUST00000226303.2, ENSMUST00000226603.2, ENSMUST00000226785.2, ENSMUST00000226873.2, ENSMUST00000228311.2

Found 253 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGGTGAACCAACTCAAAGCCCTGGGTCTGGGCCTGGGTGGCAGCTaGGTTGGTCAGCTCATGAGCTCTCCTGCACCCACACCCCTAGGG +
Preference number: 1 (lower is better)
Translates to: GVNQLKALGLGLGGS*VGQLMSSPAPTPLG
Trigger: CCCTAGGGGTGTGGGTGCAGGAGAGCTCATGAGCTGACCAACTCAGCTGCCACCCAGGCCCAGACCCAGGGCTTTGAGTTGGTTCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CCA 90 bp AGATGTTGGGGTGAACCAACTCAAAGCCCTGGGTCTGGGCCTGGGTaGCAGCTGAGTTGGTCAGCTCATGAGCTCTCCTGCACCCACACC +
Preference number: 1 (lower is better)
Translates to: RCWGEPTQSPGSGPG*QLSWSAHELSCTHT
Trigger: GGTGTGGGTGCAGGAGAGCTCATGAGCTGACCAACTCAGCTGCCACCCAGGCCCAGACCCAGGGCTTTGAGTTGGTTCACCCCAACATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CCA 90 bp CCAGCCCCTTCAAGTGCTCCAGCAGTTCATGGATGGGGTAGATGTTaGGGTGAACCAACTCAAAGCCCTGGGTCTGGGCCTGGGTGGCAG +
Preference number: 1 (lower is better)
Translates to: PAPSSAPAVHGWGRC*GEPTQSPGSGPGWQ
Trigger: CTGCCACCCAGGCCCAGACCCAGGGCTTTGAGTTGGTTCACCCCAACATCTACCCCATCCATGAACTGCTGGAGCACTTGAAGGGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR TCA 90 bp GAAGAGGGCACCAGATCTCATAGCCACCACGTGGTTGCTGGGAGTTaGACTCAGGACCTTTGGAAGAGCAGGCCTCTGCGCCATCTCTCC +
Preference number: 1 (lower is better)
Translates to: EEGTRSHSHHVVAGS*TQDLWKSRPLRHLS
Trigger: GGAGAGATGGCGCAGAGGCCTGCTCTTCCAAAGGTCCTGAGTTCAACTCCCAGCAACCACGTGGTGGCTATGAGATCTGGTGCCCTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR CCA 90 bp GGATCTGCAGGACCAGCCCCTTCAAGTGCTCCAGCAGTTCATGGATaGGGTAGATGTTGGGGTGAACCAACTCAAAGCCCTGGGTCTGGG +
Preference number: 1 (lower is better)
Translates to: GSAGPAPSSAPAVHG*GRCWGEPTQSPGSG
Trigger: CCCAGACCCAGGGCTTTGAGTTGGTTCACCCCAACATCTACCCCATCCATGAACTGCTGGAGCACTTGAAGGGGCTGGTCCTGCAGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR GCA 90 bp CCTTTGGTGGGTCATGTTCATCAACACAGACCCCTGTTGCTGCAGTaGCACGGACCCACAGGCTGGGACTTCACCATGGTGTCACATGAG +
Preference number: 1 (lower is better)
Translates to: PLVGHVHQHRPLLLQ*HGPTGWDFTMVSHE
Trigger: CTCATGTGACACCATGGTGAAGTCCCAGCCTGTGGGTCCGTGGCACTGCAGCAACAGGGGTCTGTGTTGATGAACATGACCCACCAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CCA 90 bp TATCCTGCAGGCCAGAAGAGGGCACCAGATCTCATAGCCACCACGTaGTTGCTGGGAGTTGAACTCAGGACCTTTGGAAGAGCAGGCCTC +
Preference number: 1 (lower is better)
Translates to: YPAGQKRAPDLIATT*LLGVELRTFGRAGL
Trigger: GAGGCCTGCTCTTCCAAAGGTCCTGAGTTCAACTCCCAGCAACCACGTGGTGGCTATGAGATCTGGTGCCCTCTTCTGGCCTGCAGGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR GCA 90 bp CGGACATCTATATGGCCCCAGGCTGCAACCCAGACCAGGGATGTCTaGATGGCCTTTGGTGGGTCATGTTCATCAACACAGACCCCTGTT +
Preference number: 1 (lower is better)
Translates to: RTSIWPQAATQTRDV*MAFGGSCSSTQTPV
Trigger: AACAGGGGTCTGTGTTGATGAACATGACCCACCAAAGGCCATGCAGACATCCCTGGTCTGGGTTGCAGCCTGGGGCCATATAGATGTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CCA 90 bp CATCTATATGGCCCCAGGCTGCAACCCAGACCAGGGATGTCTGCATaGCCTTTGGTGGGTCATGTTCATCAACACAGACCCCTGTTGCTG +
Preference number: 1 (lower is better)
Translates to: HLYGPRLQPRPGMSA*PLVGHVHQHRPLLL
Trigger: CAGCAACAGGGGTCTGTGTTGATGAACATGACCCACCAAAGGCCATGCAGACATCCCTGGTCTGGGTTGCAGCCTGGGGCCATATAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR GCA 90 bp ATTGCCCGGAGAGATGGCTTAGTGGTTCAGAACGCTTGTGGCTCTTaGAGAGGACCAGGTTTGATTCTCAGACCCACAGGGCAGCTCACA +
Preference number: 1 (lower is better)
Translates to: IARRDGLVVQNACGS*RGPGLILRPTGQLT
Trigger: TGTGAGCTGCCCTGTGGGTCTGAGAATCAAACCTGGTCCTCTGCAAGAGCCACAAGCGTTCTGAACCACTAAGCCATCTCTCCGGGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226603.2
3UTR CCA 90 bp GTGTGTCTGTGGGCATTACATGTGTACAGAAGTCAGATGTGCCCATaGAGGACAGAAGAGGGCATCGGACCCCCTGGTGCTGGAGTTACA +
Preference number: 1 (lower is better)
Translates to: VCLWALHVYRSQMCP*RTEEGIGPPGAGVT
Trigger: TGTAACTCCAGCACCAGGGGGTCCGATGCCCTCTTCTGTCCTCCATGGGCACATCTGACTTCTGTACACATGTAATGCCCACAGACACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR GCA 90 bp GGAAGCTCACACCCATGTAACAGTCCTCACAGGTCAGCCGTTCTGTaGGGTTGCCACTTGCATGTTTCCAAAGTCGTCATCTTCCTCATG +
Preference number: 1 (lower is better)
Translates to: GSSHPCNSPHRSAVL*GCHLHVSKVVIFLM
Trigger: CATGAGGAAGATGACGACTTTGGAAACATGCAAGTGGCAACCGCACAGAACGGCTGACCTGTGAGGACTGTTACATGGGTGTGAGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111835.4
ENSMUST00000226303.2
ENSMUST00000226785.2
3UTR GCA 90 bp GTTCATTGTGATGAGTCACTGGCGTGGTTCCAGGCCTCTGGCTTCTaGCACACTATCAATACTGGATCCTCACTGGGACTCCTCACTGAT +
Preference number: 1 (lower is better)
Translates to: VHCDESLAWFQASGF*HTINTGSSLGLLTD
Trigger: ATCAGTGAGGAGTCCCAGTGAGGATCCAGTATTGATAGTGTGGCAGAAGCCAGAGGCCTGGAACCACGCCAGTGACTCATCACAATGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CCA 90 bp TCCAGGCCTCTGGCTTCTGCCACACTATCAATACTGGATCCTCACTaGGACTCCTCACTGATAGCCTGTTGTTGTCCTGTGTCATGGAGA +
Preference number: 1 (lower is better)
Translates to: SRPLASATLSILDPH*DSSLIACCCPVSWR
Trigger: TCTCCATGACACAGGACAACAACAGGCTATCAGTGAGGAGTCCCAGTGAGGATCCAGTATTGATAGTGTGGCAGAAGCCAGAGGCCTGGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR TCA 90 bp GCAAGCAGCCTAGCACTCCAGCCTCTCATATGGTTAGCAAGGGGGTaGGAGTTGCCACACTTGGGAGTAATCTTCAGTTTGATCCCAAGA +
Preference number: 1 (lower is better)
Translates to: ASSLALQPLIWLARG*ELPHLGVIFSLIPR
Trigger: TCTTGGGATCAAACTGAAGATTACTCCCAAGTGTGGCAACTCTCACCCCCTTGCTAACCATATGAGAGGCTGGAGTGCTAGGCTGCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR GCA 90 bp TTTGAGACAAGGTTTTTCTGTGTACCCCTGGCTGTCCTGGAACTCTaGAAACTCTGTTTGCAGACCCAAAGCCACAGAGACCCACTTGCC +
Preference number: 1 (lower is better)
Translates to: FETRFFCVPLAVLEL*KLCLQTQSHRDPLA
Trigger: GGCAAGTGGGTCTCTGTGGCTTTGGGTCTGCAAACAGAGTTTGCAGAGTTCCAGGACAGCCAGGGGTACACAGAAAAACCTTGTCTCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR GCA 90 bp TCACACCCATGTAACAGTCCTCACAGGTCAGCCGTTCTGTGCGGTTaGCACTTGCATGTTTCCAAAGTCGTCATCTTCCTCATGTGTTCT +
Preference number: 1 (lower is better)
Translates to: SHPCNSPHRSAVLCG*HLHVSKVVIFLMCS
Trigger: AGAACACATGAGGAAGATGACGACTTTGGAAACATGCAAGTGGCAACCGCACAGAACGGCTGACCTGTGAGGACTGTTACATGGGTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111835.4
ENSMUST00000226303.2
ENSMUST00000226785.2
3UTR TCA 90 bp TCAGACACTCCAGAAGAGAGCATCGGATCCCATTACAGATGGTTGTaGACCACCATGTGGCTGCTGGAACTTGAACTCAGGACCTCTAAA +
Preference number: 1 (lower is better)
Translates to: SDTPEESIGSHYRWL*TTMWLLELELRTSK
Trigger: TTTAGAGGTCCTGAGTTCAAGTTCCAGCAGCCACATGGTGGTTCACAACCATCTGTAATGGGATCCGATGCTCTCTTCTGGAGTGTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226603.2
3UTR TCA 90 bp CCTCCTGAGTGCTGGGAGACAAGTCTCATTAATTCAGTCGCGCTATaGACTTGTGATCCTTCTGCCTCAGAGTCTGGAGTAGGTGAAAAC +
Preference number: 1 (lower is better)
Translates to: PPECWETSLINSVAL*TCDPSASESGVGEN
Trigger: GTTTTCACCTACTCCAGACTCTGAGGCAGAAGGATCACAAGTTCATAGCGCGACTGAATTAATGAGACTTGTCTCCCAGCACTCAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR GCA 90 bp CATGTAACAGTCCTCACAGGTCAGCCGTTCTGTGCGGTTGCCACTTaGATGTTTCCAAAGTCGTCATCTTCCTCATGTGTTCTCTTCACA +
Preference number: 1 (lower is better)
Translates to: HVTVLTGQPFCAVAT*MFPKSSSSSCVLFT
Trigger: TGTGAAGAGAACACATGAGGAAGATGACGACTTTGGAAACATGCAAGTGGCAACCGCACAGAACGGCTGACCTGTGAGGACTGTTACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111835.4
ENSMUST00000226303.2
ENSMUST00000226785.2
3UTR GCA 90 bp TTCCAAAGTTTAACCCAGGCTGGCCTAAGACTCCTATTCCCTTGGTaGCTGAAGTTCTGGGATTATAAGCACGTCCCTCTATGTCTGGTG +
Preference number: 1 (lower is better)
Translates to: FQSLTQAGLRLLFPW*LKFWDYKHVPLCLV
Trigger: CACCAGACATAGAGGGACGTGCTTATAATCCCAGAACTTCAGGCACCAAGGGAATAGGAGTCTTAGGCCAGCCTGGGTTAAACTTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR CCA 90 bp GTATTCCAAAGTTTAACCCAGGCTGGCCTAAGACTCCTATTCCCTTaGTGCCTGAAGTTCTGGGATTATAAGCACGTCCCTCTATGTCTG +
Preference number: 1 (lower is better)
Translates to: VFQSLTQAGLRLLFP*CLKFWDYKHVPLCL
Trigger: CAGACATAGAGGGACGTGCTTATAATCCCAGAACTTCAGGCACCAAGGGAATAGGAGTCTTAGGCCAGCCTGGGTTAAACTTTGGAATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR GCA 90 bp AAGCAGAAAGGAGAGAACTACAGGAAACAACCTTCACCCTTGTGCTaGTGGTGTGTCCCTCCGCCCATAATAAAAGAGGGTGAGTTATTT +
Preference number: 1 (lower is better)
Translates to: KQKGENYRKQPSPLC*WCVPPPIIKEGELF
Trigger: AAATAACTCACCCTCTTTTATTATGGGCGGAGGGACACACCAGCAGCACAAGGGTGAAGGTTGTTTCCTGTAGTTCTCTCCTTTCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR TCA 90 bp TGTCACATGGTATTAGAATTATCCAGGGTCCTTTTCATTTGTCAATaGGCAGCTCCCAGAGCTGCTACCCTGGTTTCCGTACCATTGACA +
Preference number: 1 (lower is better)
Translates to: CHMVLELSRVLFICQ*AAPRAATLVSVPLT
Trigger: TGTCAATGGTACGGAAACCAGGGTAGCAGCTCTGGGAGCTGCTCATTGACAAATGAAAAGGACCCTGGATAATTCTAATACCATGTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR CCA 90 bp TTGTTCATACATCTTTGTTTGCAAACGTTCATTGTGATGAGTCACTaGCGTGGTTCCAGGCCTCTGGCTTCTGCCACACTATCAATACTG +
Preference number: 1 (lower is better)
Translates to: LFIHLCLQTFIVMSH*RGSRPLASATLSIL
Trigger: CAGTATTGATAGTGTGGCAGAAGCCAGAGGCCTGGAACCACGCCAGTGACTCATCACAATGAACGTTTGCAAACAAAGATGTATGAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CCA 90 bp CTTTTTGGATATGCTCTGTTTATGACAAGATTGCATTATGGGGATTaGGGTTTAGAGCTCTGCTTTAGCAGTACAGAGGGCAGGTTGAGC +
Preference number: 1 (lower is better)
Translates to: LFGYALFMTRLHYGD*GLELCFSSTEGRLS
Trigger: GCTCAACCTGCCCTCTGTACTGCTAAAGCAGAGCTCTAAACCCCAATCCCCATAATGCAATCTTGTCATAAACAGAGCATATCCAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR TCA 90 bp GTGATATGCCTGCCTTTGCTTCAGAGGCAGAGGGGCAGATCTCGCTaGATTCCAGGACAGCCAGAGCTATATAATAAACAAAATTATTTA +
Preference number: 1 (lower is better)
Translates to: VICLPLLQRQRGRSR*IPGQPELYNKQNYL
Trigger: TAAATAATTTTGTTTATTATATAGCTCTGGCTGTCCTGGAATTCAGCGAGATCTGCCCCTCTGCCTCTGAAGCAAAGGCAGGCATATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226603.2
3UTR TCA 90 bp CTTGAACTCAGGACCTCTAAAAGAACAGTCAGTGCCCTTACCTGCTaGGCCATCTCTCTAGCCCTAAAAGCTGTTATTTGTTTGTTTGTT +
Preference number: 1 (lower is better)
Translates to: LELRTSKRTVSALTC*AISLALKAVICLFV
Trigger: AACAAACAAACAAATAACAGCTTTTAGGGCTAGAGAGATGGCTCAGCAGGTAAGGGCACTGACTGTTCTTTTAGAGGTCCTGAGTTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226603.2
3UTR TCA 90 bp ACTCCAAGAGAGATCTTTGTTGGCCTGTATGTATACAGGGATTTTTaGATACCCAATGTAATCTTGGCTCTGCTAGACCACCATGCCTGT +
Preference number: 1 (lower is better)
Translates to: TPREIFVGLYVYRDF*IPNVILALLDHHAC
Trigger: ACAGGCATGGTGGTCTAGCAGAGCCAAGATTACATTGGGTATTCAAAAATCCCTGTATACATACAGGCCAACAAAGATCTCTCTTGGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR GCA 90 bp AGCAAATGCATCTCTGTATTTCATCCCAAACGTCTCCATGATGTATaGAATGACAAAGGCAGCACTTCTAGAGATACCTGCATTCCCATG +
Preference number: 1 (lower is better)
Translates to: SKCISVFHPKRLHDV*NDKGSTSRDTCIPM
Trigger: CATGGGAATGCAGGTATCTCTAGAAGTGCTGCCTTTGTCATTGCATACATCATGGAGACGTTTGGGATGAAATACAGAGATGCATTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226303.2
ENSMUST00000226785.2
3UTR CCA 90 bp AAATTACAATACAATGAAATTCAGATAGATGAGCCAGCAATAAGATaGCTCAAGAGGTTGGCCACCAAGCCCAACAACCCAAGTCCTAGC +
Preference number: 1 (lower is better)
Translates to: KLQYNEIQIDEPAIR*LKRLATKPNNPSPS
Trigger: GCTAGGACTTGGGTTGTTGGGCTTGGTGGCCAACCTCTTGAGCCATCTTATTGCTGGCTCATCTATCTGAATTTCATTGTATTGTAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR TCA 90 bp TTATTGAGACAGCGTTTCATATCACATTGGTCATATGTGTGTTTTTaGGACAGTATTCCAAAGTTTAACCCAGGCTGGCCTAAGACTCCT +
Preference number: 1 (lower is better)
Translates to: LLRQRFISHWSYVCF*DSIPKFNPGWPKTP
Trigger: AGGAGTCTTAGGCCAGCCTGGGTTAAACTTTGGAATACTGTCTCAAAAACACACATATGACCAATGTGATATGAAACGCTGTCTCAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR GCA 90 bp AGCAAATGCATCTCTGTATTTCATCCCAAACGTCTCCATGATGTATaGAATGACAAAGGCAGCACTGAAGACAGAGAAACAGTTAGAATA +
Preference number: 1 (lower is better)
Translates to: SKCISVFHPKRLHDV*NDKGSTEDRETVRI
Trigger: TATTCTAACTGTTTCTCTGTCTTCAGTGCTGCCTTTGTCATTGCATACATCATGGAGACGTTTGGGATGAAATACAGAGATGCATTTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226603.2
3UTR GCA 90 bp ATGCTACAAAGCTTAAATAACTGTTTTAGAGTTCATTTTTGTTGCTaGAGCCCAGTGAGCTCCCTAACTACTAGACTGAAGTACACTGTG +
Preference number: 1 (lower is better)
Translates to: MLQSLNNCFRVHFCC*SPVSSLTTRLKYTV
Trigger: CACAGTGTACTTCAGTCTAGTAGTTAGGGAGCTCACTGGGCTGCAGCAACAAAAATGAACTCTAAAACAGTTATTTAAGCTTTGTAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR CCA 90 bp TCAGTGAGCCATGGATTATGGGTTGACTCCAAGAGAGATCTTTGTTaGCCTGTATGTATACAGGGATTTTTGAATACCCAATGTAATCTT +
Preference number: 1 (lower is better)
Translates to: SVSHGLWVDSKRDLC*PVCIQGFLNTQCNL
Trigger: AAGATTACATTGGGTATTCAAAAATCCCTGTATACATACAGGCCAACAAAGATCTCTCTTGGAGTCAACCCATAATCCATGGCTCACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR CCA 90 bp AGAGATTGCTTTAATCACAATTTCTGTTCAGTGAGCCATGGATTATaGGTTGACTCCAAGAGAGATCTTTGTTGGCCTGTATGTATACAG +
Preference number: 1 (lower is better)
Translates to: RDCFNHNFCSVSHGL*VDSKRDLCWPVCIQ
Trigger: CTGTATACATACAGGCCAACAAAGATCTCTCTTGGAGTCAACCCATAATCCATGGCTCACTGAACAGAAATTGTGATTAAAGCAATCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR TCA 90 bp TTCTACCCAGAAGACAAAGAGGTCTTGAGGCATAAGGAATATGAATaGGCTTCTCAATCATTGCAAGTACAATGGCACAAGAGTTTTAAT +
Preference number: 1 (lower is better)
Translates to: FYPEDKEVLRHKEYE*ASQSLQVQWHKSFN
Trigger: ATTAAAACTCTTGTGCCATTGTACTTGCAATGATTGAGAAGCTCATTCATATTCCTTATGCCTCAAGACCTCTTTGTCTTCTGGGTAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR GCA 90 bp TTAATGCTACAAAGCTTAAATAACTGTTTTAGAGTTCATTTTTGTTaGTGCAGCCCAGTGAGCTCCCTAACTACTAGACTGAAGTACACT +
Preference number: 1 (lower is better)
Translates to: LMLQSLNNCFRVHFC*CSPVSSLTTRLKYT
Trigger: AGTGTACTTCAGTCTAGTAGTTAGGGAGCTCACTGGGCTGCAGCAACAAAAATGAACTCTAAAACAGTTATTTAAGCTTTGTAGCATTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR GCA 90 bp ATTCCCACAAGTTGTAGTTCAACTTCCACAAAAGCCATTCACAAATaGAGATGCACATTCACACACTCTTTTTGGATATGCTCTGTTTAT +
Preference number: 1 (lower is better)
Translates to: IPTSCSSTSTKAIHK*RCTFTHSFWICSVY
Trigger: ATAAACAGAGCATATCCAAAAAGAGTGTGTGAATGTGCATCTGCATTTGTGAATGGCTTTTGTGGAAGTTGAACTACAACTTGTGGGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR CCA 90 bp GTATGTACACGTAACCATGGAAACTGTATGGTTTCTGTCCCAGTTTaGCCTCTTGCCGAGAAACTTATTTTAAGAGAAACTTATTTTAAG +
Preference number: 1 (lower is better)
Translates to: VCTRNHGNCMVSVPV*PLAEKLILRETYFK
Trigger: CTTAAAATAAGTTTCTCTTAAAATAAGTTTCTCGGCAAGAGGCCAAACTGGGACAGAAACCATACAGTTTCCATGGTTACGTGTACATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR-3UTR GCA 90 bp GGGCCAGTTCTCCAGCACTGTCCAGATGAGGGGCGGGGCCAGTCTTGCAGCGCCCCCCTGTTGCTGCAGTaGCACGGACCCACAGGCTGG +
Preference number: 2 (lower is better)
Translates to: GPVLQHCPDEGRGQSCSAPLLLQ*HGPTGW
Trigger: CCAGCCTGTGGGTCCGTGGCACTGCAGCAACAGGGG...GGCGCTGCAAGACTGGCCCCGCCCCTCATCTGGACAGTGCTGGAGAACTGGCCC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR-3UTR GCA 90 bp GGGCCAGTTCTCCAGCACTGTCCAGATGAGGGGCGGGGCCAGTCTTGCAGCGCCCGCCTCTCCTCACTGTaGCCACATCCTTCTGCTTCT +
Preference number: 2 (lower is better)
Translates to: GPVLQHCPDEGRGQSCSARLSSL*PHPSAS
Trigger: AGAAGCAGAAGGATGTGGGCACAGTGAGGAGAGGCG...GGCGCTGCAAGACTGGCCCCGCCCCTCATCTGGACAGTGCTGGAGAACTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR-3UTR CCA 90 bp GATCCTGTAGCTTGGGATCTGCAGGACCAGCCCCTTCAAGTGCTCCAGCAGTTCTCAAAGCCCTGGGTCTaGGCCTGGGTGGCAGCTGAG +
Preference number: 2 (lower is better)
Translates to: DPVAWDLQDQPLQVLQQFSKPWV*AWVAAE
Trigger: CTCAGCTGCCACCCAGGCCCAGACCCAGGGCTTTGA...GAACTGCTGGAGCACTTGAAGGGGCTGGTCCTGCAGATCCCAAGCTACAGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CAA 90 bp CCTGCAGGCCAGAAGAGGGCACCAGATCTCATAGCCACCACGTGGTaGCTGGGAGTTGAACTCAGGACCTTTGGAAGAGCAGGCCTCTGC +
Preference number: 2 (lower is better)
Translates to: PAGQKRAPDLIATTW*LGVELRTFGRAGLC
Trigger: GCAGAGGCCTGCTCTTCCAAAGGTCCTGAGTTCAACTCCCAGCAACCACGTGGTGGCTATGAGATCTGGTGCCCTCTTCTGGCCTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR-3UTR GCA 90 bp CTCCAGCAGTTCATGGATGGGGTAGATGTTGGGGTGAACCAACTCAAAGCCCTGGCTCATGAGCTCTCCTaGACCCACACCCCTAGGGCC +
Preference number: 2 (lower is better)
Translates to: LQQFMDGVDVGVNQLKALAHELS*THTPRA
Trigger: GGCCCTAGGGGTGTGGGTGCAGGAGAGCTCATGAGC...CAGGGCTTTGAGTTGGTTCACCCCAACATCTACCCCATCCATGAACTGCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR-3UTR CCA 90 bp GTGTCATGGAGATCCTGTAGCTTGGGATCTGCAGGACCAGCCCCTTCAAGTGCTACCAACTCAAAGCCCTaGGTCTGGGCCTGGGTGGCA +
Preference number: 2 (lower is better)
Translates to: VSWRSCSLGSAGPAPSSATNSKP*VWAWVA
Trigger: TGCCACCCAGGCCCAGACCCAGGGCTTTGAGTTGGT...AGCACTTGAAGGGGCTGGTCCTGCAGATCCCAAGCTACAGGATCTCCATGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR-3UTR CCA 90 bp TCTGCCACACTATCAATACTGGATCCTCACTGGGACTCCTCACTGATAGCCTGTCCCTGGGTCTGGGCCTaGGTGGCAGCTGAGTTGGTC +
Preference number: 2 (lower is better)
Translates to: SATLSILDPHWDSSLIACPWVWA*VAAELV
Trigger: GACCAACTCAGCTGCCACCCAGGCCCAGACCCAGGG...ACAGGCTATCAGTGAGGAGTCCCAGTGAGGATCCAGTATTGATAGTGTGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR-3UTR CCA 90 bp TTCCCATCATGTACCCTAATCCTACTCATCTCCCCATCCCTGTGTATCCTCCTCGGGTGGCAGCTGAGTTaGTCAGCTCATGAGCTCTCC +
Preference number: 2 (lower is better)
Translates to: FPSCTLILLISPSLCILLGWQLS*SAHELS
Trigger: GGAGAGCTCATGAGCTGACCAACTCAGCTGCCACCC...GAGGAGGATACACAGGGATGGGGAGATGAGTAGGATTAGGGTACATGATGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR-3UTR CCA 90 bp GTGAATTTCCCATCATGTACCCTAATCCTACTCATCTCCCCATCCCTGTGTATCGGGTCTGGGCCTGGGTaGCAGCTGAGTTGGTCAGCT +
Preference number: 2 (lower is better)
Translates to: VNFPSCTLILLISPSLCIGSGPG*QLSWSA
Trigger: AGCTGACCAACTCAGCTGCCACCCAGGCCCAGACCC...GATACACAGGGATGGGGAGATGAGTAGGATTAGGGTACATGATGGGAAATTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CAA 90 bp TCACTGATAGCCTGTTGTTGTCCTGTGTCATGGAGATCCTGTAGCTaGGGATCTGCAGGACCAGCCCCTTCAAGTGCTCCAGCAGTTCAT +
Preference number: 2 (lower is better)
Translates to: SLIACCCPVSWRSCS*GSAGPAPSSAPAVH
Trigger: ATGAACTGCTGGAGCACTTGAAGGGGCTGGTCCTGCAGATCCCAAGCTACAGGATCTCCATGACACAGGACAACAACAGGCTATCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR-3UTR TCA 90 bp GATCCCATTACAGATGGTTGTGAACCACCATGTGGCTGCTGGAACTTGAACTCAGCAGAGGACCAGGTTTaGTTCTCAGACCCACAGGGC +
Preference number: 2 (lower is better)
Translates to: DPITDGCEPPCGCWNLNSAEDQV*FSDPQG
Trigger: GCCCTGTGGGTCTGAGAATCAAACCTGGTCCTCTGC...TGAGTTCAAGTTCCAGCAGCCACATGGTGGTTCACAACCATCTGTAATGGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226603.2
3UTR-3UTR CCA 90 bp TGCTGGAACTTGAACTCAGGACCTCTAAAAGAACAGTCAGTGCCCTTACCTGCTTCAGACGAACATTTCTaGCCTCTACAGGCCCCAGGC +
Preference number: 2 (lower is better)
Translates to: CWNLNSGPLKEQSVPLPASDEHF*PLQAPG
Trigger: GCCTGGGGCCTGTAGAGGCCAGAAATGTTCGTCTGA...AGCAGGTAAGGGCACTGACTGTTCTTTTAGAGGTCCTGAGTTCAAGTTCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226603.2
3UTR-3UTR CCA 90 bp AATTTCCCATCATGTACCCTAATCCTACTCATCTCCCCATCCCTGTGTATCCTCTCTACCCACGCTTGGTaGTGGCAGGCAAGGGTCATC +
Preference number: 2 (lower is better)
Translates to: NFPSCTLILLISPSLCILSTHAW*WQARVI
Trigger: GATGACCCTTGCCTGCCACCACCAAGCGTGGGTAGA...GAGGATACACAGGGATGGGGAGATGAGTAGGATTAGGGTACATGATGGGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR-3UTR CCA 90 bp TTCCCATCATGTACCCTAATCCTACTCATCTCCCCATCCCTGTGTATCCTCCTCGCTGGGACTTCACCATaGTGTCACATGAGAGAGCAG +
Preference number: 2 (lower is better)
Translates to: FPSCTLILLISPSLCILLAGTSP*CHMREQ
Trigger: CTGCTCTCTCATGTGACACCATGGTGAAGTCCCAGC...GAGGAGGATACACAGGGATGGGGAGATGAGTAGGATTAGGGTACATGATGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR-3UTR CCA 90 bp GTGAATTTCCCATCATGTACCCTAATCCTACTCATCTCCCCATCCCTGTGTATCCCTCGGACATCTATATaGCCCCAGGCTGCAACCCAG +
Preference number: 2 (lower is better)
Translates to: VNFPSCTLILLISPSLCIPRTSI*PQAATQ
Trigger: CTGGGTTGCAGCCTGGGGCCATATAGATGTCCGAGG...GATACACAGGGATGGGGAGATGAGTAGGATTAGGGTACATGATGGGAAATTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CAA 90 bp GGCTTAGTGGTTCAGAACGCTTGTGGCTCTTGCAGAGGACCAGGTTaGATTCTCAGACCCACAGGGCAGCTCACAACTATCTGTATTCTA +
Preference number: 2 (lower is better)
Translates to: GLVVQNACGSCRGPG*ILRPTGQLTTICIL
Trigger: TAGAATACAGATAGTTGTGAGCTGCCCTGTGGGTCTGAGAATCAAACCTGGTCCTCTGCAAGAGCCACAAGCGTTCTGAACCACTAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226603.2
3UTR CAA 90 bp ATCCAGAGGGTTGTGGACAGGCATGATGAAACTGCAGCCTCTGGTTaGTGTGTCTGTGGGCATTACATGTGTACAGAAGTCAGATGTGCC +
Preference number: 2 (lower is better)
Translates to: IQRVVDRHDETAASG*CVCGHYMCTEVRCA
Trigger: GGCACATCTGACTTCTGTACACATGTAATGCCCACAGACACACAAACCAGAGGCTGCAGTTTCATCATGCCTGTCCACAACCCTCTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR-3UTR TCA 90 bp AACAGTCCTCACAGGTCAGCCGTTCTGTGCGGTTGCCACTTGCATGTTTCCAAACCTGTGGTACCAGAATaGACAGCTAAGGACCTTTCT +
Preference number: 2 (lower is better)
Translates to: NSPHRSAVLCGCHLHVSKPVVPE*TAKDLS
Trigger: AGAAAGGTCCTTAGCTGTTCATTCTGGTACCACAGG...TTTGGAAACATGCAAGTGGCAACCGCACAGAACGGCTGACCTGTGAGGACTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111835.4
ENSMUST00000226303.2
ENSMUST00000226785.2
3UTR-3UTR GCA 90 bp ACCATGGTGTCACATGAGAGAGCAGGCTACTCACATCAGGCTGTTCCTCACTTCTACAGAAGTCAGATGTaGCCATGGAGGACAGAAGAG +
Preference number: 2 (lower is better)
Translates to: TMVSHERAGYSHQAVPHFYRSQM*PWRTEE
Trigger: CTCTTCTGTCCTCCATGGGCACATCTGACTTCTGTA...GAAGTGAGGAACAGCCTGATGTGAGTAGCCTGCTCTCTCATGTGACACCATGGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR-3UTR GCA 90 bp TGGCTGCTGGAACTTGAACTCAGGACCTCTAAAAGAACAGTCAGTGCCCTTACCGAATGCACAGTGATATaGCTGCCTTTGCTTCAGAGG +
Preference number: 2 (lower is better)
Translates to: WLLELELRTSKRTVSALTECTVI*LPLLQR
Trigger: CCTCTGAAGCAAAGGCAGGCATATCACTGTGCATTC...GGTAAGGGCACTGACTGTTCTTTTAGAGGTCCTGAGTTCAAGTTCCAGCAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226603.2
3UTR-3UTR CCA 90 bp CAACCCAGACCAGGGATGTCTGCATGGCCTTTGGTGGGTCATGTTCATCAACACTGGTTTGTGTGTCTGTaGGCATTACATGTGTACAGA +
Preference number: 2 (lower is better)
Translates to: QPRPGMSAWPLVGHVHQHWFVCL*ALHVYR
Trigger: TCTGTACACATGTAATGCCCACAGACACACAAACCA...GTGTTGATGAACATGACCCACCAAAGGCCATGCAGACATCCCTGGTCTGGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR-3UTR CCA 90 bp ACAGTCCTCACAGGTCAGCCGTTCTGTGCGGTTGCCACTTGCATGTTTCCAAAGATACCTGCATTCCCATaGACAAGAACTTTTCCTCCA +
Preference number: 2 (lower is better)
Translates to: TVLTGQPFCAVATCMFPKIPAFP*TRTFPP
Trigger: TGGAGGAAAAGTTCTTGTCCATGGGAATGCAGGTAT...CTTTGGAAACATGCAAGTGGCAACCGCACAGAACGGCTGACCTGTGAGGACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226303.2
ENSMUST00000226785.2
3UTR CAA 90 bp GGTTTTAATAGCTCCAATCCTGGGACACACTCTTTATCCAGAGGGTaGTGGACAGGCATGATGAAACTGCAGCCTCTGGTTTGTGTGTCT +
Preference number: 2 (lower is better)
Translates to: GFNSSNPGTHSLSRG*WTGMMKLQPLVCVS
Trigger: AGACACACAAACCAGAGGCTGCAGTTTCATCATGCCTGTCCACAACCCTCTGGATAAAGAGTGTGTCCCAGGATTGGAGCTATTAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CAA 90 bp AATGAAATTCAGATAGATGAGCCAGCAATAAGATGGCTCAAGAGGTaGGCCACCAAGCCCAACAACCCAAGTCCTAGCACTGAGATCAGC +
Preference number: 2 (lower is better)
Translates to: NEIQIDEPAIRWLKR*ATKPNNPSPSTEIS
Trigger: GCTGATCTCAGTGCTAGGACTTGGGTTGTTGGGCTTGGTGGCCAACCTCTTGAGCCATCTTATTGCTGGCTCATCTATCTGAATTTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR-3UTR TCA 90 bp TGTGAATTTCCCATCATGTACCCTAATCCTACTCATCTCCCCATCCCTGTGTATCACCATGGTGTCACATaGGAGAGCAGGCTACTCACA +
Preference number: 2 (lower is better)
Translates to: CEFPIMYPNPTHLPIPVYHHGVT*ESRLLT
Trigger: TGTGAGTAGCCTGCTCTCTCATGTGACACCATGGTG...ATACACAGGGATGGGGAGATGAGTAGGATTAGGGTACATGATGGGAAATTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR-3UTR TCA 90 bp GCCATGGATTATGGGTTGACTCCAAGAGAGATCTTTGTTGGCCTGTATGTATACGCAGTCCCTAGTGTCTaGGACTGTCTCCAGTATATC +
Preference number: 2 (lower is better)
Translates to: AMDYGLTPREIFVGLYVYAVPSV*DCLQYI
Trigger: GATATACTGGAGACAGTCTCAGACACTAGGGACTGC...GTATACATACAGGCCAACAAAGATCTCTCTTGGAGTCAACCCATAATCCATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR-3UTR GCA 90 bp GCAATGACAAAGGCAGCACTTCTAGAGATACCTGCATTCCCATGGACAAGAACTTGTGCGGTTGCCACTTaGATGTTTCCAAAGTCGTCA +
Preference number: 2 (lower is better)
Translates to: AMTKAALLEIPAFPWTRTCAVAT*MFPKSS
Trigger: TGACGACTTTGGAAACATGCAAGTGGCAACCGCACA...AGTTCTTGTCCATGGGAATGCAGGTATCTCTAGAAGTGCTGCCTTTGTCATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226303.2
ENSMUST00000226785.2
3UTR-3UTR GCA 90 bp GCATCTCTGTATTTCATCCCAAACGTCTCCATGATGTATGCAATGACAAAGGCAAGGTCAGCCGTTCTGTaGGGTTGCCACTTGCATGTT +
Preference number: 2 (lower is better)
Translates to: ASLYFIPNVSMMYAMTKARSAVL*GCHLHV
Trigger: AACATGCAAGTGGCAACCGCACAGAACGGCTGACCT...TGCCTTTGTCATTGCATACATCATGGAGACGTTTGGGATGAAATACAGAGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226303.2
ENSMUST00000226785.2
3UTR-3UTR GCA 90 bp GATCCCATTACAGATGGTTGTGAACCACCATGTGGCTGCTGGAACTTGAACTCACGTCTCCATGATGTATaGAATGACAAAGGCAGCACT +
Preference number: 2 (lower is better)
Translates to: DPITDGCEPPCGCWNLNSRLHDV*NDKGST
Trigger: AGTGCTGCCTTTGTCATTGCATACATCATGGAGACG...TGAGTTCAAGTTCCAGCAGCCACATGGTGGTTCACAACCATCTGTAATGGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226603.2
3UTR-3UTR GCA 90 bp AAAAGTTGTTTAAATGGGGATGTATCTCTCATCTTTGTAAGGTGCTATTACAGCCCTTCACCCTTGTGCTaGTGGTGTGTCCCTCCGCCC +
Preference number: 2 (lower is better)
Translates to: KSCLNGDVSLIFVRCYYSPSPLC*WCVPPP
Trigger: GGGCGGAGGGACACACCAGCAGCACAAGGGTGAAGG...GCTGTAATAGCACCTTACAAAGATGAGAGATACATCCCCATTTAAACAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR-3UTR TCA 90 bp TCCATGATGTATGCAATGACAAAGGCAGCACTTCTAGAGATACCTGCATTCCCACCTGTGGTACCAGAATaGACAGCTAAGGACCTTTCT +
Preference number: 2 (lower is better)
Translates to: SMMYAMTKAALLEIPAFPPVVPE*TAKDLS
Trigger: AGAAAGGTCCTTAGCTGTTCATTCTGGTACCACAGG...TGGGAATGCAGGTATCTCTAGAAGTGCTGCCTTTGTCATTGCATACATCATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226303.2
ENSMUST00000226785.2
3UTR-3UTR GCA 90 bp TGCCATCTACTGCATAAGTCCAACATCTTAAAGTGTTGCAGAGAAACATGTCTGAGGTCAGCCGTTCTGTaGGGTTGCCACTTGCATGTT +
Preference number: 2 (lower is better)
Translates to: CHLLHKSNILKCCRETCLRSAVL*GCHLHV
Trigger: AACATGCAAGTGGCAACCGCACAGAACGGCTGACCT...CAGACATGTTTCTCTGCAACACTTTAAGATGTTGGACTTATGCAGTAGATGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111835.4
ENSMUST00000226303.2
ENSMUST00000226785.2
3UTR-3UTR GCA 90 bp TACACTGAAGCCACCCACAAATTGCTTTCCCCAATGGATACATCTTCAAAGCAACCCATCACCCATCAGTaGCATCTACTGCATAAGTCC +
Preference number: 2 (lower is better)
Translates to: YTEATHKLLSPMDTSSKQPITHQ*HLLHKS
Trigger: GGACTTATGCAGTAGATGGCACTGATGGGTGATGGG...TTGCTTTGAAGATGTATCCATTGGGGAAAGCAATTTGTGGGTGGCTTCAGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR-3UTR CCA 90 bp AACAGTCCTCACAGGTCAGCCGTTCTGTGCGGTTGCCACTTGCATGTTTCCAAAATTTTGCTAAGTAGATaGCTTCATATTCCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: NSPHRSAVLCGCHLHVSKILLSR*LHIPAE
Trigger: CTCAGCAGGAATATGAAGCCATCTACTTAGCAAAAT...TTTGGAAACATGCAAGTGGCAACCGCACAGAACGGCTGACCTGTGAGGACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111835.4
3UTR-3UTR CCA 90 bp GGCTGCTGGAACTTGAACTCAGGACCTCTAAAAGAACAGTCAGTGCCCTTACCTATACCTGCATTCCCATaGACAAGAACTTTTCCTGAA +
Preference number: 2 (lower is better)
Translates to: GCWNLNSGPLKEQSVPLPIPAFP*TRTFPE
Trigger: TTCAGGAAAAGTTCTTGTCCATGGGAATGCAGGTAT...AGGTAAGGGCACTGACTGTTCTTTTAGAGGTCCTGAGTTCAAGTTCCAGCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226603.2
3UTR CAA 90 bp GACTCCAAGAGAGATCTTTGTTGGCCTGTATGTATACAGGGATTTTaGAATACCCAATGTAATCTTGGCTCTGCTAGACCACCATGCCTG +
Preference number: 2 (lower is better)
Translates to: DSKRDLCWPVCIQGF*NTQCNLGSARPPCL
Trigger: CAGGCATGGTGGTCTAGCAGAGCCAAGATTACATTGGGTATTCAAAAATCCCTGTATACATACAGGCCAACAAAGATCTCTCTTGGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR-3UTR GCA 90 bp GTCGTACCCGATATCACAGTTAATTATTGCCAAGAGAGATGGAACCTTCTTAGCTCACTCTGTAGACCATaGTGGCCTCAAACTCTGAGA +
Preference number: 2 (lower is better)
Translates to: VVPDITVNYCQERWNLLSSLCRP*WPQTLR
Trigger: TCTCAGAGTTTGAGGCCAGCATGGTCTACAGAGTGA...GCTAAGAAGGTTCCATCTCTCTTGGCAATAATTAACTGTGATATCGGGTACGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR CAA 90 bp ATTGTGGAAGCTGTAGTGTGTCAGCGTGTCCCTCAATACACCCTGTaGTTCATACATCTTTGTTTGCAAACGTTCATTGTGATGAGTCAC +
Preference number: 2 (lower is better)
Translates to: IVEAVVCQRVPQYTL*FIHLCLQTFIVMSH
Trigger: GTGACTCATCACAATGAACGTTTGCAAACAAAGATGTATGAACAACAGGGTGTATTGAGGGACACGCTGACACACTACAGCTTCCACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR-3UTR TCA 90 bp GTGAGCCATGGATTATGGGTTGACTCCAAGAGAGATCTTTGTTGGCCTGTATGTAGTTGGCTAAAGTCATaGTTTAAAGATACGGGACCA +
Preference number: 2 (lower is better)
Translates to: VSHGLWVDSKRDLCWPVCSWLKS*FKDTGP
Trigger: TGGTCCCGTATCTTTAAATCATGACTTTAGCCAACT...ACATACAGGCCAACAAAGATCTCTCTTGGAGTCAACCCATAATCCATGGCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR-3UTR TCA 90 bp GTCGTACCCGATATCACAGTTAATTATTGCCAAGAGAGATGGAACCTTCTTAGCACCTTTCTATACTGTTaGTGTCATAGGGTGGTGAGC +
Preference number: 2 (lower is better)
Translates to: VVPDITVNYCQERWNLLSTFLYC*CHRVVS
Trigger: GCTCACCACCCTATGACATCAACAGTATAGAAAGGT...GCTAAGAAGGTTCCATCTCTCTTGGCAATAATTAACTGTGATATCGGGTACGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR-3UTR TCA 90 bp AGGAGATGGGATGGGAAACCAGAAGAGGCTAGAAATCAAGGTAACAGTAATTCTAGACCACCATGCCTGTaGCACAACAGAATTAAAAGC +
Preference number: 2 (lower is better)
Translates to: RRWDGKPEEARNQGNSNSRPPCL*HNRIKS
Trigger: GCTTTTAATTCTGTTGTGTCACAGGCATGGTGGTCT...AGAATTACTGTTACCTTGATTTCTAGCCTCTTCTGGTTTCCCATCCCATCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR-3UTR TCA 90 bp GCCATGGATTATGGGTTGACTCCAAGAGAGATCTTTGTTGGCCTGTATGTATACACAATTTCTGTTCAGTaGGCCATGGATTATGGGTTG +
Preference number: 2 (lower is better)
Translates to: AMDYGLTPREIFVGLYVYTISVQ*AMDYGL
Trigger: CAACCCATAATCCATGGCTCACTGAACAGAAATTGT...GTATACATACAGGCCAACAAAGATCTCTCTTGGAGTCAACCCATAATCCATGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR-3UTR GCA 90 bp AGGAGATGGGATGGGAAACCAGAAGAGGCTAGAAATCAAGGTAACAGTAATTCTCGTCTCCATGATGTATaGAATGACAAAGGCAGCACT +
Preference number: 2 (lower is better)
Translates to: RRWDGKPEEARNQGNSNSRLHDV*NDKGST
Trigger: AGTGCTGCCTTTGTCATTGCATACATCATGGAGACG...AGAATTACTGTTACCTTGATTTCTAGCCTCTTCTGGTTTCCCATCCCATCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226785.2
3UTR-3UTR CCA 90 bp GTCGTACCCGATATCACAGTTAATTATTGCCAAGAGAGATGGAACCTTCTTAGCTTGCCTCCTGAGTGCTaGGAGACAAGTCTCATTAAT +
Preference number: 2 (lower is better)
Translates to: VVPDITVNYCQERWNLLSLPPEC*ETSLIN
Trigger: ATTAATGAGACTTGTCTCCCAGCACTCAGGAGGCAA...GCTAAGAAGGTTCCATCTCTCTTGGCAATAATTAACTGTGATATCGGGTACGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR-3UTR TCA 90 bp GTCGTACCCGATATCACAGTTAATTATTGCCAAGAGAGATGGAACCTTCTTAGCTTCACTTGCTTTCACTaGGGCAAAATAGCGTCAACA +
Preference number: 2 (lower is better)
Translates to: VVPDITVNYCQERWNLLSFTCFH*GKIAST
Trigger: TGTTGACGCTATTTTGCCTCAGTGAAAGCAAGTGAA...GCTAAGAAGGTTCCATCTCTCTTGGCAATAATTAACTGTGATATCGGGTACGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR-3UTR CCA 90 bp AGGAGATGGGATGGGAAACCAGAAGAGGCTAGAAATCAAGGTAACAGTAATTCTTCTTCACACTACCTGTaGTACCAGAATGAACAGCTA +
Preference number: 2 (lower is better)
Translates to: RRWDGKPEEARNQGNSNSSSHYL*YQNEQL
Trigger: TAGCTGTTCATTCTGGTACCACAGGTAGTGTGAAGA...AGAATTACTGTTACCTTGATTTCTAGCCTCTTCTGGTTTCCCATCCCATCTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226785.2
3UTR-3UTR CCA 90 bp ATACACCCTGTTGTTCATACATCTTTGTTTGCAAACGTTCATTGTGATGAGTCACCAGCAGTTCATGGATaGGGTAGATGTTGGGGTGAA +
Preference number: 2 (lower is better)
Translates to: IHPVVHTSLFANVHCDESPAVHG*GRCWGE
Trigger: TTCACCCCAACATCTACCCCATCCATGAACTGCTGG...TGACTCATCACAATGAACGTTTGCAAACAAAGATGTATGAACAACAGGGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR-3UTR CCA 90 bp GTGAGCCATGGATTATGGGTTGACTCCAAGAGAGATCTTTGTTGGCCTGTATGTGGAAGAAAAGAAACTTaGAGGCTTCTTATGAAAGGA +
Preference number: 2 (lower is better)
Translates to: VSHGLWVDSKRDLCWPVCGRKET*RLLMKG
Trigger: TCCTTTCATAAGAAGCCTCCAAGTTTCTTTTCTTCC...ACATACAGGCCAACAAAGATCTCTCTTGGAGTCAACCCATAATCCATGGCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR-3UTR GCA 90 bp AAGAAAGTATTTGTGAGTTTACCATTTCACATTATCATCACTAGGATCCTCTCCCCCATCACCCATCAGTaGCATCTACTGCATAAGTCC +
Preference number: 2 (lower is better)
Translates to: KKVFVSLPFHIIITRILSPITHQ*HLLHKS
Trigger: GGACTTATGCAGTAGATGGCACTGATGGGTGATGGG...GGAGAGGATCCTAGTGATGATAATGTGAAATGGTAAACTCACAAATACTTTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000111835.4
ENSMUST00000226303.2
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR-3UTR CCA 90 bp TGCCATCTACTGCATAAGTCCAACATCTTAAAGTGTTGCAGAGAAACATGTCTGTCTTCACACTACCTGTaGTACCAGAATGAACAGCTA +
Preference number: 2 (lower is better)
Translates to: CHLLHKSNILKCCRETCLSSHYL*YQNEQL
Trigger: TAGCTGTTCATTCTGGTACCACAGGTAGTGTGAAGA...CAGACATGTTTCTCTGCAACACTTTAAGATGTTGGACTTATGCAGTAGATGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111835.4
ENSMUST00000226303.2
ENSMUST00000226785.2
3UTR-3UTR CCA 90 bp CAGTGCCATCTACTGCATAAGTCCAACATCTTAAAGTGTTGCAGAGAAACATGTTCTTCACACTACCTGTaGTACCAGAATGAACAGCTA +
Preference number: 2 (lower is better)
Translates to: QCHLLHKSNILKCCRETCSSHYL*YQNEQL
Trigger: TAGCTGTTCATTCTGGTACCACAGGTAGTGTGAAGA...ACATGTTTCTCTGCAACACTTTAAGATGTTGGACTTATGCAGTAGATGGCACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111835.4
ENSMUST00000226303.2
ENSMUST00000226785.2
3UTR-3UTR CCA 90 bp CAGTGCCATCTACTGCATAAGTCCAACATCTTAAAGTGTTGCAGAGAAACATGTATACCTGCATTCCCATaGACAAGAACTTTTCCTCCA +
Preference number: 2 (lower is better)
Translates to: QCHLLHKSNILKCCRETCIPAFP*TRTFPP
Trigger: TGGAGGAAAAGTTCTTGTCCATGGGAATGCAGGTAT...ACATGTTTCTCTGCAACACTTTAAGATGTTGGACTTATGCAGTAGATGGCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226303.2
ENSMUST00000226785.2
3UTR-3UTR TCA 90 bp GTATGTATACAGGGATTTTTGAATACCCAATGTAATCTTGGCTCTGCTAGACCAAGAGCTCAGCAACTCTaGAAAGACCAAGTCTACATT +
Preference number: 2 (lower is better)
Translates to: VCIQGFLNTQCNLGSARPRAQQL*KDQVYI
Trigger: AATGTAGACTTGGTCTTTTCAGAGTTGCTGAGCTCT...TGGTCTAGCAGAGCCAAGATTACATTGGGTATTCAAAAATCCCTGTATACATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR-3UTR TCA 90 bp TACAGCCCTACACCCCTTCAAATGAATATTCTGTTCTACAAGCGGTTGAAAGTTTTGGGGGTTTCATATTaGAGAAACAGTGCTACATTG +
Preference number: 2 (lower is better)
Translates to: YSPTPLQMNILFYKRLKVLGVSY*RNSATL
Trigger: CAATGTAGCACTGTTTCTTCAATATGAAACCCCCAA...AACTTTCAACCGCTTGTAGAACAGAATATTCATTTGAAGGGGTGTAGGGCTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR-3UTR TCA 90 bp ATCTTGCACTTTTTGGGTCATATATTTAGGAGAATGTGGCATCCCTTACATAAAAGAGTCTGGAGTAGGTaGAAACAGGTCTGGCTTATG +
Preference number: 2 (lower is better)
Translates to: ILHFLGHIFRRMWHPLHKRVWSR*KQVWLM
Trigger: CATAAGCCAGACCTGTTTTCACCTACTCCAGACTCT...TTTATGTAAGGGATGCCACATTCTCCTAAATATATGACCCAAAAAGTGCAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR-3UTR TCA 90 bp AAAAGTTGTTTAAATGGGGATGTATCTCTCATCTTTGTAAGGTGCTATTACAGCCAGCCCCGTTGTGTTTaGGACAAGGTTTTTCTGTGT +
Preference number: 2 (lower is better)
Translates to: KSCLNGDVSLIFVRCYYSQPRCV*DKVFLC
Trigger: ACACAGAAAAACCTTGTCTCAAACACAACGGGGCTG...GCTGTAATAGCACCTTACAAAGATGAGAGATACATCCCCATTTAAACAACTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR-3UTR GCA 90 bp AAGAAAGTATTTGTGAGTTTACCATTTCACATTATCATCACTAGGATCCTCTCCTGTGCGGTTGCCACTTaGATGTTTCCAAAGTCGTCA +
Preference number: 2 (lower is better)
Translates to: KKVFVSLPFHIIITRILSCAVAT*MFPKSS
Trigger: TGACGACTTTGGAAACATGCAAGTGGCAACCGCACA...GGAGAGGATCCTAGTGATGATAATGTGAAATGGTAAACTCACAAATACTTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111835.4
ENSMUST00000226303.2
ENSMUST00000226785.2
3UTR CAA 90 bp TACAGCCCTACACCCCTTCAAATGAATATTCTGTTCTACAAGCGGTaGAAAGTTGGTAGCAAAGTTATCACACTTGAACATTCCTACTAT +
Preference number: 2 (lower is better)
Translates to: YSPTPLQMNILFYKR*KVGSKVITLEHSYY
Trigger: ATAGTAGGAATGTTCAAGTGTGATAACTTTGCTACCAACTTTCAACCGCTTGTAGAACAGAATATTCATTTGAAGGGGTGTAGGGCTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR-3UTR TCA 90 bp GTATGTATACAGGGATTTTTGAATACCCAATGTAATCTTGGCTCTGCTAGACCATTGGGGGTTTCATATTaGAGAAACAGTGCTACATTG +
Preference number: 2 (lower is better)
Translates to: VCIQGFLNTQCNLGSARPLGVSY*RNSATL
Trigger: CAATGTAGCACTGTTTCTTCAATATGAAACCCCCAA...TGGTCTAGCAGAGCCAAGATTACATTGGGTATTCAAAAATCCCTGTATACATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR-3UTR TCA 90 bp ATCTTGCACTTTTTGGGTCATATATTTAGGAGAATGTGGCATCCCTTACATAAATTCAGGCTCCTACTGTaGAGGACAAAGAACCTTTCT +
Preference number: 2 (lower is better)
Translates to: ILHFLGHIFRRMWHPLHKFRLLL*RTKNLS
Trigger: AGAAAGGTTCTTTGTCCTTCACAGTAGGAGCCTGAA...TTTATGTAAGGGATGCCACATTCTCCTAAATATATGACCCAAAAAGTGCAAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR CAA 90 bp CTGTGTTGTTCATCTGAAAGAACTCAGTCTTACTTTGCTAGCAGATaGTATGTGTGTTTCTGCAAACTAAACCAAGTAACATCACTCTCT +
Preference number: 2 (lower is better)
Translates to: LCCSSERTQSYFASR*YVCFCKLNQVTSLS
Trigger: AGAGAGTGATGTTACTTGGTTTAGTTTGCAGAAACACACATACAATCTGCTAGCAAAGTAAGACTGAGTTCTTTCAGATGAACAACACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR-3UTR CCA 90 bp AACGTAAGCAATTGCCTATACAGAGGTAAAGAGACACATATGTTACTGTTCTTGAAGAGAGATCTTTGTTaGCCTGTATGTATACAGGGA +
Preference number: 2 (lower is better)
Translates to: NVSNCLYRGKETHMLLFLKRDLC*PVCIQG
Trigger: TCCCTGTATACATACAGGCCAACAAAGATCTCTCTT...CAAGAACAGTAACATATGTGTCTCTTTACCTCTGTATAGGCAATTGCTTACGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR-3UTR TCA 90 bp AAAAGTTGTTTAAATGGGGATGTATCTCTCATCTTTGTAAGGTGCTATTACAGCTGGTTAAGGAGAAACTaGTTTTCCTGTTTCCTCTGT +
Preference number: 2 (lower is better)
Translates to: KSCLNGDVSLIFVRCYYSWLRRN*FSCFLC
Trigger: ACAGAGGAAACAGGAAAATCAGTTTCTCCTTAACCA...GCTGTAATAGCACCTTACAAAGATGAGAGATACATCCCCATTTAAACAACTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR-3UTR GCA 90 bp AAAAGTTGTTTAAATGGGGATGTATCTCTCATCTTTGTAAGGTGCTATTACAGCGAGCTTCTCAATCATTaGAAGTACAATGGCACAAGA +
Preference number: 2 (lower is better)
Translates to: KSCLNGDVSLIFVRCYYSELLNH*KYNGTR
Trigger: TCTTGTGCCATTGTACTTGCAATGATTGAGAAGCTC...GCTGTAATAGCACCTTACAAAGATGAGAGATACATCCCCATTTAAACAACTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR-3UTR CCA 90 bp AACGTAAGCAATTGCCTATACAGAGGTAAAGAGACACATATGTTACTGTTCTTGCTACTATTTGCTCATTaGAGTGTTGTTGAATGGACA +
Preference number: 2 (lower is better)
Translates to: NVSNCLYRGKETHMLLFLLLFAH*SVVEWT
Trigger: TGTCCATTCAACAACACTCCAATGAGCAAATAGTAG...CAAGAACAGTAACATATGTGTCTCTTTACCTCTGTATAGGCAATTGCTTACGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR-3UTR CCA 90 bp AAAAGTTGTTTAAATGGGGATGTATCTCTCATCTTTGTAAGGTGCTATTACAGCACATGTTCTAAGAACTaGTATTCCAGGCATGTACCA +
Preference number: 2 (lower is better)
Translates to: KSCLNGDVSLIFVRCYYSTCSKN*YSRHVP
Trigger: TGGTACATGCCTGGAATACCAGTTCTTAGAACATGT...GCTGTAATAGCACCTTACAAAGATGAGAGATACATCCCCATTTAAACAACTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR-3UTR TCA 90 bp AAAAGTTGTTTAAATGGGGATGTATCTCTCATCTTTGTAAGGTGCTATTACAGCTCTGTGTTGTTCATCTaGAAGAACTCAGTCTTACTT +
Preference number: 2 (lower is better)
Translates to: KSCLNGDVSLIFVRCYYSSVLFI*KNSVLL
Trigger: AAGTAAGACTGAGTTCTTTCAGATGAACAACACAGA...GCTGTAATAGCACCTTACAAAGATGAGAGATACATCCCCATTTAAACAACTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR-3UTR CCA 90 bp AAAAGTTGTTTAAATGGGGATGTATCTCTCATCTTTGTAAGGTGCTATTACAGCTCTCAAACTTTCAAATaGGGAGTAATGAAGTTCCCT +
Preference number: 2 (lower is better)
Translates to: KSCLNGDVSLIFVRCYYSSQTFK*GVMKFP
Trigger: AGGGAACTTCATTACTCCCCATTTGAAAGTTTGAGA...GCTGTAATAGCACCTTACAAAGATGAGAGATACATCCCCATTTAAACAACTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR-3UTR GCA 90 bp AAGAAAGTATTTGTGAGTTTACCATTTCACATTATCATCACTAGGATCCTCTCCAACATCTTAAAGTGTTaGAGAGAAACATGTCTGGAA +
Preference number: 2 (lower is better)
Translates to: KKVFVSLPFHIIITRILSNILKC*RETCLE
Trigger: TTCCAGACATGTTTCTCTGCAACACTTTAAGATGTT...GGAGAGGATCCTAGTGATGATAATGTGAAATGGTAAACTCACAAATACTTTCTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111835.4
ENSMUST00000226303.2
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR-3UTR CCA 90 bp AAGAAAGTATTTGTGAGTTTACCATTTCACATTATCATCACTAGGATCCTCTCCGCAGAGAAACATGTCTaGAAGCAATGTATAATTGAA +
Preference number: 2 (lower is better)
Translates to: KKVFVSLPFHIIITRILSAEKHV*KQCIIE
Trigger: TTCAATTATACATTGCTTCCAGACATGTTTCTCTGC...GGAGAGGATCCTAGTGATGATAATGTGAAATGGTAAACTCACAAATACTTTCTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111835.4
ENSMUST00000226303.2
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR-3UTR CCA 90 bp AAAAGTTGTTTAAATGGGGATGTATCTCTCATCTTTGTAAGGTGCTATTACAGCTCTTTGTACTTCAATTaGACTTTGGATTTTCCTGCA +
Preference number: 2 (lower is better)
Translates to: KSCLNGDVSLIFVRCYYSSLYFN*TLDFPA
Trigger: TGCAGGAAAATCCAAAGTCCAATTGAAGTACAAAGA...GCTGTAATAGCACCTTACAAAGATGAGAGATACATCCCCATTTAAACAACTTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR GCA 72 bp CTTGCAGCGCCCTCGGACATCTATATGGCCCCAGGCTaGAACCCAGACCAGGGATGTCTGCATGGCCTTTGG +
Preference number: 3 (lower is better)
Translates to: LAAPSDIYMAPG*NPDQGCLHGLW
Trigger: CCAAAGGCCATGCAGACATCCCTGGTCTGGGTTGCAGCCTGGGGCCATATAGATGTCCGAGGGCGCTGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CCA 72 bp GGTGAACCAACTCAAAGCCCTGGGTCTGGGCCTGGGTaGCAGCTGAGTTGGTCAGCTCATGAGCTCTCCTGC +
Preference number: 3 (lower is better)
Translates to: GEPTQSPGSGPG*QLSWSAHELSC
Trigger: GCAGGAGAGCTCATGAGCTGACCAACTCAGCTGCCACCCAGGCCCAGACCCAGGGCTTTGAGTTGGTTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CCA 72 bp GGCCCCAGGCTGCAACCCAGACCAGGGATGTCTGCATaGCCTTTGGTGGGTCATGTTCATCAACACAGACCC +
Preference number: 3 (lower is better)
Translates to: GPRLQPRPGMSA*PLVGHVHQHRP
Trigger: GGGTCTGTGTTGATGAACATGACCCACCAAAGGCCATGCAGACATCCCTGGTCTGGGTTGCAGCCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CCA 72 bp TGCAGTGCCACGGACCCACAGGCTGGGACTTCACCATaGTGTCACATGAGAGAGCAGGCTACTCACATCAGG +
Preference number: 3 (lower is better)
Translates to: CSATDPQAGTSP*CHMREQATHIR
Trigger: CCTGATGTGAGTAGCCTGCTCTCTCATGTGACACCATGGTGAAGTCCCAGCCTGTGGGTCCGTGGCACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR TCA 72 bp ACCAGATCTCATAGCCACCACGTGGTTGCTGGGAGTTaGACTCAGGACCTTTGGAAGAGCAGGCCTCTGCGC +
Preference number: 3 (lower is better)
Translates to: TRSHSHHVVAGS*TQDLWKSRPLR
Trigger: GCGCAGAGGCCTGCTCTTCCAAAGGTCCTGAGTTCAACTCCCAGCAACCACGTGGTGGCTATGAGATCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR TCA 72 bp GGATTTCTGAGTTTGAGGACAGCCTGGTCTACAGAGTaGGTTCGAGGACAGAAACCCTGTCTCGGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: GFLSLRTAWSTE*VRGQKPCLGWG
Trigger: CCCCCACCCGAGACAGGGTTTCTGTCCTCGAACTCACTCTGTAGACCAGGCTGTCCTCAAACTCAGAAATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR GCA 72 bp ATATGGCCCCAGGCTGCAACCCAGACCAGGGATGTCTaGATGGCCTTTGGTGGGTCATGTTCATCAACACAG +
Preference number: 3 (lower is better)
Translates to: IWPQAATQTRDV*MAFGGSCSSTQ
Trigger: CTGTGTTGATGAACATGACCCACCAAAGGCCATGCAGACATCCCTGGTCTGGGTTGCAGCCTGGGGCCATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR GCA 72 bp GATGAGTCACTGGCGTGGTTCCAGGCCTCTGGCTTCTaGCACACTATCAATACTGGATCCTCACTGGGACTC +
Preference number: 3 (lower is better)
Translates to: DESLAWFQASGF*HTINTGSSLGL
Trigger: GAGTCCCAGTGAGGATCCAGTATTGATAGTGTGGCAGAAGCCAGAGGCCTGGAACCACGCCAGTGACTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR GCA 72 bp TACCCCTGGCTGTCCTGGAACTCTGCAAACTCTGTTTaGAGACCCAAAGCCACAGAGACCCACTTGCCTCCT +
Preference number: 3 (lower is better)
Translates to: YPWLSWNSANSV*RPKATETHLPP
Trigger: AGGAGGCAAGTGGGTCTCTGTGGCTTTGGGTCTGCAAACAGAGTTTGCAGAGTTCCAGGACAGCCAGGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR CCA 72 bp TGGGCATTACATGTGTACAGAAGTCAGATGTGCCCATaGAGGACAGAAGAGGGCATCGGACCCCCTGGTGCT +
Preference number: 3 (lower is better)
Translates to: WALHVYRSQMCP*RTEEGIGPPGA
Trigger: AGCACCAGGGGGTCCGATGCCCTCTTCTGTCCTCCATGGGCACATCTGACTTCTGTACACATGTAATGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CCA 72 bp TGCAACCCAGACCAGGGATGTCTGCATGGCCTTTGGTaGGTCATGTTCATCAACACAGACCCCTGTTGCTGC +
Preference number: 3 (lower is better)
Translates to: CNPDQGCLHGLW*VMFINTDPCCC
Trigger: GCAGCAACAGGGGTCTGTGTTGATGAACATGACCCACCAAAGGCCATGCAGACATCCCTGGTCTGGGTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CCA 72 bp GGACCAGCCCCTTCAAGTGCTCCAGCAGTTCATGGATaGGGTAGATGTTGGGGTGAACCAACTCAAAGCCCT +
Preference number: 3 (lower is better)
Translates to: GPAPSSAPAVHG*GRCWGEPTQSP
Trigger: AGGGCTTTGAGTTGGTTCACCCCAACATCTACCCCATCCATGAACTGCTGGAGCACTTGAAGGGGCTGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CCA 72 bp CCTGTTGTTGTCCTGTGTCATGGAGATCCTGTAGCTTaGGATCTGCAGGACCAGCCCCTTCAAGTGCTCCAG +
Preference number: 3 (lower is better)
Translates to: PVVVLCHGDPVA*DLQDQPLQVLQ
Trigger: CTGGAGCACTTGAAGGGGCTGGTCCTGCAGATCCCAAGCTACAGGATCTCCATGACACAGGACAACAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CCA 72 bp GGCCAGAAGAGGGCACCAGATCTCATAGCCACCACGTaGTTGCTGGGAGTTGAACTCAGGACCTTTGGAAGA +
Preference number: 3 (lower is better)
Translates to: GQKRAPDLIATT*LLGVELRTFGR
Trigger: TCTTCCAAAGGTCCTGAGTTCAACTCCCAGCAACCACGTGGTGGCTATGAGATCTGGTGCCCTCTTCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR GCA 72 bp TGTCTGTGGGCATTACATGTGTACAGAAGTCAGATGTaGCCATGGAGGACAGAAGAGGGCATCGGACCCCCT +
Preference number: 3 (lower is better)
Translates to: CLWALHVYRSQM*PWRTEEGIGPP
Trigger: AGGGGGTCCGATGCCCTCTTCTGTCCTCCATGGGCACATCTGACTTCTGTACACATGTAATGCCCACAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CCA 72 bp TGCCCGGAGAGATGGCTTAGTGGTTCAGAACGCTTGTaGCTCTTGCAGAGGACCAGGTTTGATTCTCAGACC +
Preference number: 3 (lower is better)
Translates to: CPERWLSGSERL*LLQRTRFDSQT
Trigger: GGTCTGAGAATCAAACCTGGTCCTCTGCAAGAGCCACAAGCGTTCTGAACCACTAAGCCATCTCTCCGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226603.2
3UTR-3UTR CAA 90 bp GTGAATTTCCCATCATGTACCCTAATCCTACTCATCTCCCCATCCCTGTGTATCCAACACAGACCCCTGTaGCTGCAGTGCCACGGACCC +
Preference number: 3 (lower is better)
Translates to: VNFPSCTLILLISPSLCIQHRPL*LQCHGP
Trigger: GGGTCCGTGGCACTGCAGCAACAGGGGTCTGTGTTG...GATACACAGGGATGGGGAGATGAGTAGGATTAGGGTACATGATGGGAAATTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR TCA 72 bp AGGACCTTCAGAGGAGCAGTCAGTGCTCTTAACCACTaGGCCATCTCTCCAGCCCCGTTGTGTTTGAGACAA +
Preference number: 3 (lower is better)
Translates to: RTFRGAVSALNH*AISPAPLCLRQ
Trigger: TTGTCTCAAACACAACGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCCTCTGAAGGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR GCA 72 bp CACCCATGTAACAGTCCTCACAGGTCAGCCGTTCTGTaGGGTTGCCACTTGCATGTTTCCAAAGTCGTCATC +
Preference number: 3 (lower is better)
Translates to: HPCNSPHRSAVL*GCHLHVSKVVI
Trigger: GATGACGACTTTGGAAACATGCAAGTGGCAACCGCACAGAACGGCTGACCTGTGAGGACTGTTACATGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111835.4
ENSMUST00000226303.2
ENSMUST00000226785.2
3UTR GCA 72 bp AGAGATGGCTTAGTGGTTCAGAACGCTTGTGGCTCTTaGAGAGGACCAGGTTTGATTCTCAGACCCACAGGG +
Preference number: 3 (lower is better)
Translates to: RDGLVVQNACGS*RGPGLILRPTG
Trigger: CCCTGTGGGTCTGAGAATCAAACCTGGTCCTCTGCAAGAGCCACAAGCGTTCTGAACCACTAAGCCATCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226603.2
3UTR TCA 72 bp CCAGAAGAGAGCATCGGATCCCATTACAGATGGTTGTaGACCACCATGTGGCTGCTGGAACTTGAACTCAGG +
Preference number: 3 (lower is better)
Translates to: PEESIGSHYRWL*TTMWLLELELR
Trigger: CCTGAGTTCAAGTTCCAGCAGCCACATGGTGGTTCACAACCATCTGTAATGGGATCCGATGCTCTCTTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226603.2
3UTR GCA 72 bp GTCCTCACAGGTCAGCCGTTCTGTGCGGTTGCCACTTaGATGTTTCCAAAGTCGTCATCTTCCTCATGTGTT +
Preference number: 3 (lower is better)
Translates to: VLTGQPFCAVAT*MFPKSSSSSCV
Trigger: AACACATGAGGAAGATGACGACTTTGGAAACATGCAAGTGGCAACCGCACAGAACGGCTGACCTGTGAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111835.4
ENSMUST00000226303.2
ENSMUST00000226785.2
3UTR GCA 72 bp GCAAGGAACTTAAGTGCAACCTGTTACCTTACACAGTaGCTCATGGTACCCTGGGAGTGTGCGGGCATCATT +
Preference number: 3 (lower is better)
Translates to: ARNLSATCYLTQ*LMVPWECAGII
Trigger: AATGATGCCCGCACACTCCCAGGGTACCATGAGGCACTGTGTAAGGTAACAGGTTGCACTTAAGTTCCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR GCA 72 bp GGAGAGAACTACAGGAAACAACCTTCACCCTTGTGCTaGTGGTGTGTCCCTCCGCCCATAATAAAAGAGGGT +
Preference number: 3 (lower is better)
Translates to: GENYRKQPSPLC*WCVPPPIIKEG
Trigger: ACCCTCTTTTATTATGGGCGGAGGGACACACCAGCAGCACAAGGGTGAAGGTTGTTTCCTGTAGTTCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR GCA 72 bp AGGTTTTTCTGTGTACCCCTGGCTGTCCTGGAACTCTaGAAACTCTGTTTGCAGACCCAAAGCCACAGAGAC +
Preference number: 3 (lower is better)
Translates to: RFFCVPLAVLEL*KLCLQTQSHRD
Trigger: GTCTCTGTGGCTTTGGGTCTGCAAACAGAGTTTGCAGAGTTCCAGGACAGCCAGGGGTACACAGAAAAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR CCA 72 bp CTGGCTTCTGCCACACTATCAATACTGGATCCTCACTaGGACTCCTCACTGATAGCCTGTTGTTGTCCTGTG +
Preference number: 3 (lower is better)
Translates to: LASATLSILDPH*DSSLIACCCPV
Trigger: CACAGGACAACAACAGGCTATCAGTGAGGAGTCCCAGTGAGGATCCAGTATTGATAGTGTGGCAGAAGCCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CCA 72 bp TCTGAACACTTAAAGGAGTATTATTGGTCTGGGCAGTaGTGGCGCACGTCTTTAATCCCAGCACTCGGGAGG +
Preference number: 3 (lower is better)
Translates to: SEHLKEYYWSGQ*WRTSLIPALGR
Trigger: CCTCCCGAGTGCTGGGATTAAAGACGTGCGCCACCACTGCCCAGACCAATAATACTCCTTTAAGTGTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR TCA 72 bp CTAGCACTCCAGCCTCTCATATGGTTAGCAAGGGGGTaGGAGTTGCCACACTTGGGAGTAATCTTCAGTTTG +
Preference number: 3 (lower is better)
Translates to: LALQPLIWLARG*ELPHLGVIFSL
Trigger: CAAACTGAAGATTACTCCCAAGTGTGGCAACTCTCACCCCCTTGCTAACCATATGAGAGGCTGGAGTGCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR TCA 72 bp GTTCTGCTAACTGAGGAATGTTGCAAGCAGTCTCCTTaGTACCACTCCCTCCAACCCCTACTCCCTCTGTAT +
Preference number: 3 (lower is better)
Translates to: VLLTEECCKQSP*YHSLQPLLPLY
Trigger: ATACAGAGGGAGTAGGGGTTGGAGGGAGTGGTATCAAGGAGACTGCTTGCAACATTCCTCAGTTAGCAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR GCA 72 bp ACTCTGTTTGCAGACCCAAAGCCACAGAGACCCACTTaGCTCCTGAGTGCTGGGAGACAAGTCTCATTAATT +
Preference number: 3 (lower is better)
Translates to: TLFADPKPQRPT*LLSAGRQVSLI
Trigger: AATTAATGAGACTTGTCTCCCAGCACTCAGGAGGCAAGTGGGTCTCTGTGGCTTTGGGTCTGCAAACAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR GCA 72 bp TTAACCCAGGCTGGCCTAAGACTCCTATTCCCTTGGTaGCTGAAGTTCTGGGATTATAAGCACGTCCCTCTA +
Preference number: 3 (lower is better)
Translates to: LTQAGLRLLFPW*LKFWDYKHVPL
Trigger: TAGAGGGACGTGCTTATAATCCCAGAACTTCAGGCACCAAGGGAATAGGAGTCTTAGGCCAGCCTGGGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR CCA 72 bp TCCAATCCTGGGACACACTCTTTATCCAGAGGGTTGTaGACAGGCATGATGAAACTGCAGCCTCTGGTTTGT +
Preference number: 3 (lower is better)
Translates to: SNPGTHSLSRGL*TGMMKLQPLVC
Trigger: ACAAACCAGAGGCTGCAGTTTCATCATGCCTGTCCACAACCCTCTGGATAAAGAGTGTGTCCCAGGATTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CCA 72 bp CATCTTTGTTTGCAAACGTTCATTGTGATGAGTCACTaGCGTGGTTCCAGGCCTCTGGCTTCTGCCACACTA +
Preference number: 3 (lower is better)
Translates to: HLCLQTFIVMSH*RGSRPLASATL
Trigger: TAGTGTGGCAGAAGCCAGAGGCCTGGAACCACGCCAGTGACTCATCACAATGAACGTTTGCAAACAAAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CCA 72 bp TTGAGACAAGGTTTTTCTGTGTACCCCTGGCTGTCCTaGAACTCTGCAAACTCTGTTTGCAGACCCAAAGCC +
Preference number: 3 (lower is better)
Translates to: LRQGFSVYPWLS*NSANSVCRPKA
Trigger: GGCTTTGGGTCTGCAAACAGAGTTTGCAGAGTTCCAGGACAGCCAGGGGTACACAGAAAAACCTTGTCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR CCA 72 bp AGTTTAACCCAGGCTGGCCTAAGACTCCTATTCCCTTaGTGCCTGAAGTTCTGGGATTATAAGCACGTCCCT +
Preference number: 3 (lower is better)
Translates to: SLTQAGLRLLFP*CLKFWDYKHVP
Trigger: AGGGACGTGCTTATAATCCCAGAACTTCAGGCACCAAGGGAATAGGAGTCTTAGGCCAGCCTGGGTTAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR TCA 72 bp CTGCCTTTGCTTCAGAGGCAGAGGGGCAGATCTCGCTaGATTCCAGGACAGCCAGAGCTATATAATAAACAA +
Preference number: 3 (lower is better)
Translates to: LPLLQRQRGRSR*IPGQPELYNKQ
Trigger: TTGTTTATTATATAGCTCTGGCTGTCCTGGAATTCAGCGAGATCTGCCCCTCTGCCTCTGAAGCAAAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226603.2
3UTR CCA 72 bp TTGTTTGCAAACGTTCATTGTGATGAGTCACTGGCGTaGTTCCAGGCCTCTGGCTTCTGCCACACTATCAAT +
Preference number: 3 (lower is better)
Translates to: LFANVHCDESLA*FQASGFCHTIN
Trigger: ATTGATAGTGTGGCAGAAGCCAGAGGCCTGGAACCACGCCAGTGACTCATCACAATGAACGTTTGCAAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CCA 72 bp CTGAAGTACACTGTGGTGTGCCAGTGTGTAGTAACCTaGGAGGATGCTGGGAATACAAATAAAGGGGAGGAT +
Preference number: 3 (lower is better)
Translates to: LKYTVVCQCVVT*EDAGNTNKGED
Trigger: ATCCTCCCCTTTATTTGTATTCCCAGCATCCTCCCAGGTTACTACACACTGGCACACCACAGTGTACTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR CCA 72 bp CCGTTGTGTTTGAGACAAGGTTTTTCTGTGTACCCCTaGCTGTCCTGGAACTCTGCAAACTCTGTTTGCAGA +
Preference number: 3 (lower is better)
Translates to: PLCLRQGFSVYP*LSWNSANSVCR
Trigger: TCTGCAAACAGAGTTTGCAGAGTTCCAGGACAGCCAGGGGTACACAGAAAAACCTTGTCTCAAACACAACGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR-3UTR CAA 90 bp TGCCCTTACCTGCTGAGCCATCTCTCTAGCCCTAAAAGCTGTTATTTGTTTGTTGAACGCTTGTGGCTCTaGCAGAGGACCAGGTTTGAT +
Preference number: 3 (lower is better)
Translates to: CPYLLSHLSSPKSCYLFVERLWL*QRTRFD
Trigger: ATCAAACCTGGTCCTCTGCAAGAGCCACAAGCGTTC...AACAAACAAATAACAGCTTTTAGGGCTAGAGAGATGGCTCAGCAGGTAAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226603.2
3UTR-3UTR CAA 90 bp TACACTGAAGCCACCCACAAATTGCTTTCCCCAATGGATACATCTTCAAAGCAAAGCCGTTCTGTGCGGTaGCCACTTGCATGTTTCCAA +
Preference number: 3 (lower is better)
Translates to: YTEATHKLLSPMDTSSKQSRSVR*PLACFQ
Trigger: TTGGAAACATGCAAGTGGCAACCGCACAGAACGGCT...TTGCTTTGAAGATGTATCCATTGGGGAAAGCAATTTGTGGGTGGCTTCAGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226785.2
3UTR TCA 72 bp TGCTGGGAGACAAGTCTCATTAATTCAGTCGCGCTATaGACTTGTGATCCTTCTGCCTCAGAGTCTGGAGTA +
Preference number: 3 (lower is better)
Translates to: CWETSLINSVAL*TCDPSASESGV
Trigger: TACTCCAGACTCTGAGGCAGAAGGATCACAAGTTCATAGCGCGACTGAATTAATGAGACTTGTCTCCCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR GCA 72 bp GATCCCATTACAGATGGTTGTGAACCACCATGTGGCTaGTGGAACTTGAACTCAGGACCTCTAAAAGAACAG +
Preference number: 3 (lower is better)
Translates to: DPITDGCEPPCG*WNLNSGPLKEQ
Trigger: CTGTTCTTTTAGAGGTCCTGAGTTCAAGTTCCAGCAGCCACATGGTGGTTCACAACCATCTGTAATGGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226603.2
3UTR CCA 72 bp CCCATTACAGATGGTTGTGAACCACCATGTGGCTGCTaGAACTTGAACTCAGGACCTCTAAAAGAACAGTCA +
Preference number: 3 (lower is better)
Translates to: PITDGCEPPCGC*NLNSGPLKEQS
Trigger: TGACTGTTCTTTTAGAGGTCCTGAGTTCAAGTTCCAGCAGCCACATGGTGGTTCACAACCATCTGTAATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226603.2
3UTR-3UTR CAA 90 bp CAGTGCCATCTACTGCATAAGTCCAACATCTTAAAGTGTTGCAGAGAAACATGTAGCCGTTCTGTGCGGTaGCCACTTGCATGTTTCCAA +
Preference number: 3 (lower is better)
Translates to: QCHLLHKSNILKCCRETCSRSVR*PLACFQ
Trigger: TTGGAAACATGCAAGTGGCAACCGCACAGAACGGCT...ACATGTTTCTCTGCAACACTTTAAGATGTTGGACTTATGCAGTAGATGGCACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111835.4
ENSMUST00000226303.2
ENSMUST00000226785.2
3UTR TCA 72 bp AGGACCTCTAAAAGAACAGTCAGTGCCCTTACCTGCTaGGCCATCTCTCTAGCCCTAAAAGCTGTTATTTGT +
Preference number: 3 (lower is better)
Translates to: RTSKRTVSALTC*AISLALKAVIC
Trigger: ACAAATAACAGCTTTTAGGGCTAGAGAGATGGCTCAGCAGGTAAGGGCACTGACTGTTCTTTTAGAGGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226603.2
3UTR TCA 72 bp GTATTAGAATTATCCAGGGTCCTTTTCATTTGTCAATaGGCAGCTCCCAGAGCTGCTACCCTGGTTTCCGTA +
Preference number: 3 (lower is better)
Translates to: VLELSRVLFICQ*AAPRAATLVSV
Trigger: TACGGAAACCAGGGTAGCAGCTCTGGGAGCTGCTCATTGACAAATGAAAAGGACCCTGGATAATTCTAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR CCA 72 bp TACAATGAAATTCAGATAGATGAGCCAGCAATAAGATaGCTCAAGAGGTTGGCCACCAAGCCCAACAACCCA +
Preference number: 3 (lower is better)
Translates to: YNEIQIDEPAIR*LKRLATKPNNP
Trigger: TGGGTTGTTGGGCTTGGTGGCCAACCTCTTGAGCCATCTTATTGCTGGCTCATCTATCTGAATTTCATTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR GCA 72 bp TTGTTTGTTTTTACTAGTCTTGAATGCACAGTGATATaGCTGCCTTTGCTTCAGAGGCAGAGGGGCAGATCT +
Preference number: 3 (lower is better)
Translates to: LFVFTSLECTVI*LPLLQRQRGRS
Trigger: AGATCTGCCCCTCTGCCTCTGAAGCAAAGGCAGGCATATCACTGTGCATTCAAGACTAGTAAAAACAAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226603.2
3UTR GCA 72 bp AAGTCCCAGAACACCCAGAGTGATATAGTGAGACCCTaGCTCAAAAGCTCAATTTACTTCACTTGCTTTCAC +
Preference number: 3 (lower is better)
Translates to: KSQNTQSDIVRP*LKSSIYFTCFH
Trigger: GTGAAAGCAAGTGAAGTAAATTGAGCTTTTGAGGCAGGGTCTCACTATATCACTCTGGGTGTTCTGGGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR CCA 72 bp GAGTTACAGGCGTGTATAAGTAAGCAGACTCCACGCTaGGAATCACGTTCAAGTCTCCATTTCACATTATCA +
Preference number: 3 (lower is better)
Translates to: ELQACISKQTPR*ESRSSLHFTLS
Trigger: TGATAATGTGAAATGGAGACTTGAACGTGATTCCCAGCGTGGAGTCTGCTTACTTATACACGCCTGTAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CCA 72 bp AACTGTAAGTATGTACACGTAACCATGGAAACTGTATaGTTTCTGTCCCAGTTTGGCCTCTTGCCGAGAAAC +
Preference number: 3 (lower is better)
Translates to: NCKYVHVTMETV*FLSQFGLLPRN
Trigger: GTTTCTCGGCAAGAGGCCAAACTGGGACAGAAACCATACAGTTTCCATGGTTACGTGTACATACTTACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR CCA 72 bp TATGCTCTGTTTATGACAAGATTGCATTATGGGGATTaGGGTTTAGAGCTCTGCTTTAGCAGTACAGAGGGC +
Preference number: 3 (lower is better)
Translates to: YALFMTRLHYGD*GLELCFSSTEG
Trigger: GCCCTCTGTACTGCTAAAGCAGAGCTCTAAACCCCAATCCCCATAATGCAATCTTGTCATAAACAGAGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR-3UTR CAA 90 bp GTGAGCCATGGATTATGGGTTGACTCCAAGAGAGATCTTTGTTGGCCTGTATGTCAGTGCTACATTGGTTaGGTCTACTTTGAACCATTT +
Preference number: 3 (lower is better)
Translates to: VSHGLWVDSKRDLCWPVCQCYIG*VYFEPF
Trigger: AAATGGTTCAAAGTAGACCAAACCAATGTAGCACTG...ACATACAGGCCAACAAAGATCTCTCTTGGAGTCAACCCATAATCCATGGCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR-3UTR CAA 90 bp GTGAGCCATGGATTATGGGTTGACTCCAAGAGAGATCTTTGTTGGCCTGTATGTAGAAACAGTGCTACATaGGTTTGGTCTACTTTGAAC +
Preference number: 3 (lower is better)
Translates to: VSHGLWVDSKRDLCWPVCRNSAT*VWSTLN
Trigger: GTTCAAAGTAGACCAAACCAATGTAGCACTGTTTCT...ACATACAGGCCAACAAAGATCTCTCTTGGAGTCAACCCATAATCCATGGCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR-3UTR CAA 90 bp AAAAGTTGTTTAAATGGGGATGTATCTCTCATCTTTGTAAGGTGCTATTACAGCGAGCTTCACACAGGTTaGGCAAGCAGCCTAGCACTC +
Preference number: 3 (lower is better)
Translates to: KSCLNGDVSLIFVRCYYSELHTG*ASSLAL
Trigger: GAGTGCTAGGCTGCTTGCCAAACCTGTGTGAAGCTC...GCTGTAATAGCACCTTACAAAGATGAGAGATACATCCCCATTTAAACAACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR GCA 72 bp ATCTCTGTATTTCATCCCAAACGTCTCCATGATGTATaGAATGACAAAGGCAGCACTTCTAGAGATACCTGC +
Preference number: 3 (lower is better)
Translates to: ISVFHPKRLHDV*NDKGSTSRDTC
Trigger: GCAGGTATCTCTAGAAGTGCTGCCTTTGTCATTGCATACATCATGGAGACGTTTGGGATGAAATACAGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226303.2
ENSMUST00000226785.2
3UTR CCA 72 bp ACAAAGGCAGCACTTCTAGAGATACCTGCATTCCCATaGACAAGAACTTTTCCTCCATTTTGTAAGCTTCCA +
Preference number: 3 (lower is better)
Translates to: TKAALLEIPAFP*TRTFPPFCKLP
Trigger: TGGAAGCTTACAAAATGGAGGAAAAGTTCTTGTCCATGGGAATGCAGGTATCTCTAGAAGTGCTGCCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000226303.2
ENSMUST00000226785.2
3UTR-3UTR CAA 90 bp AAGAAAGTATTTGTGAGTTTACCATTTCACATTATCATCACTAGGATCCTCTCCAGCCGTTCTGTGCGGTaGCCACTTGCATGTTTCCAA +
Preference number: 3 (lower is better)
Translates to: KKVFVSLPFHIIITRILSSRSVR*PLACFQ
Trigger: TTGGAAACATGCAAGTGGCAACCGCACAGAACGGCT...GGAGAGGATCCTAGTGATGATAATGTGAAATGGTAAACTCACAAATACTTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111835.4
ENSMUST00000226303.2
ENSMUST00000226785.2
3UTR-3UTR CAA 90 bp GCCATGGATTATGGGTTGACTCCAAGAGAGATCTTTGTTGGCCTGTATGTATACGGATTTGCTTGTTTGTaGATGCAAGGCACTTTTCTT +
Preference number: 3 (lower is better)
Translates to: AMDYGLTPREIFVGLYVYGFACL*MQGTFL
Trigger: AAGAAAAGTGCCTTGCATCAACAAACAAGCAAATCC...GTATACATACAGGCCAACAAAGATCTCTCTTGGAGTCAACCCATAATCCATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR-3UTR CAA 90 bp TACACTGAAGCCACCCACAAATTGCTTTCCCCAATGGATACATCTTCAAAGCAAATAAAGGAGCTGTGTTaGTGCTACCCTAAAGTCATC +
Preference number: 3 (lower is better)
Translates to: YTEATHKLLSPMDTSSKQIKELC*CYPKVI
Trigger: GATGACTTTAGGGTAGCACAAACACAGCTCCTTTAT...TTGCTTTGAAGATGTATCCATTGGGGAAAGCAATTTGTGGGTGGCTTCAGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR-3UTR CAA 90 bp GCCATGGATTATGGGTTGACTCCAAGAGAGATCTTTGTTGGCCTGTATGTATACAGGAAGAAAAGAAACTaGGAGGCTTCTTATGAAAGG +
Preference number: 3 (lower is better)
Translates to: AMDYGLTPREIFVGLYVYRKKRN*EASYER
Trigger: CCTTTCATAAGAAGCCTCCAAGTTTCTTTTCTTCCT...GTATACATACAGGCCAACAAAGATCTCTCTTGGAGTCAACCCATAATCCATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR-3UTR CAA 90 bp AAAAGTTGTTTAAATGGGGATGTATCTCTCATCTTTGTAAGGTGCTATTACAGCGGTTTCTGTCCCAGTTaGGCCTCTTGCCGAGAAACT +
Preference number: 3 (lower is better)
Translates to: KSCLNGDVSLIFVRCYYSGFCPS*ASCRET
Trigger: AGTTTCTCGGCAAGAGGCCAAACTGGGACAGAAACC...GCTGTAATAGCACCTTACAAAGATGAGAGATACATCCCCATTTAAACAACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR TCA 72 bp GAGATCTTTGTTGGCCTGTATGTATACAGGGATTTTTaGATACCCAATGTAATCTTGGCTCTGCTAGACCAC +
Preference number: 3 (lower is better)
Translates to: EIFVGLYVYRDF*IPNVILALLDH
Trigger: GTGGTCTAGCAGAGCCAAGATTACATTGGGTATTCAAAAATCCCTGTATACATACAGGCCAACAAAGATCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR GCA 72 bp ATCTCTGTATTTCATCCCAAACGTCTCCATGATGTATaGAATGACAAAGGCAGCACTGAAGACAGAGAAACA +
Preference number: 3 (lower is better)
Translates to: ISVFHPKRLHDV*NDKGSTEDRET
Trigger: TGTTTCTCTGTCTTCAGTGCTGCCTTTGTCATTGCATACATCATGGAGACGTTTGGGATGAAATACAGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226603.2
3UTR CCA 72 bp CGTAACCATGGAAACTGTATGGTTTCTGTCCCAGTTTaGCCTCTTGCCGAGAAACTTATTTTAAGAGAAACT +
Preference number: 3 (lower is better)
Translates to: RNHGNCMVSVPV*PLAEKLILRET
Trigger: AGTTTCTCTTAAAATAAGTTTCTCGGCAAGAGGCCAAACTGGGACAGAAACCATACAGTTTCCATGGTTACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR-3UTR CAA 90 bp GTCGTACCCGATATCACAGTTAATTATTGCCAAGAGAGATGGAACCTTCTTAGCGTTTGTCTTCATTTCTaGGTAGTCAAGTGTATGGGT +
Preference number: 3 (lower is better)
Translates to: VVPDITVNYCQERWNLLSVCLHF*VVKCMG
Trigger: ACCCATACACTTGACTACCAAGAAATGAAGACAAAC...GCTAAGAAGGTTCCATCTCTCTTGGCAATAATTAACTGTGATATCGGGTACGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR-3UTR CAA 90 bp AAATTGCTTTCCCCAATGGATACATCTTCAAAGCAAAGCTGTCAGCTGAACCTCTTGGTTTGGTCTACTTaGAACCATTTTGGACAAAAG +
Preference number: 3 (lower is better)
Translates to: KLLSPMDTSSKQSCQLNLLVWST*NHFGQK
Trigger: CTTTTGTCCAAAATGGTTCAAAGTAGACCAAACCAA...GAGGTTCAGCTGACAGCTTTGCTTTGAAGATGTATCCATTGGGGAAAGCAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR-3UTR CAA 90 bp GTCGTACCCGATATCACAGTTAATTATTGCCAAGAGAGATGGAACCTTCTTAGCCTGCAGTCATTAGGTTaGTCTTTGATTTTCAGAGTT +
Preference number: 3 (lower is better)
Translates to: VVPDITVNYCQERWNLLSLQSLG*SLIFRV
Trigger: AACTCTGAAAATCAAAGACAAACCTAATGACTGCAG...GCTAAGAAGGTTCCATCTCTCTTGGCAATAATTAACTGTGATATCGGGTACGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR TCA 72 bp AGGTGCACCATTTCTCATTGGACACTTCTGTTATCATaGCCACCAGATACATATTTGTTGTTGATCCTAACC +
Preference number: 3 (lower is better)
Translates to: RCTISHWTLLLS*PPDTYLLLILT
Trigger: GGTTAGGATCAACAACAAATATGTATCTGGTGGTCATGATAACAGAAGTGTCCAATGAGAAATGGTGCACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR TCA 72 bp CTTTCACTGAGGCAAAATAGCGTCAACATTCAAAGATaGAGTCACACAGGCTTGGTGCTTTTCTTGAATTCA +
Preference number: 3 (lower is better)
Translates to: LSLRQNSVNIQR*SHTGLVLFLNS
Trigger: TGAATTCAAGAAAAGCACCAAGCCTGTGTGACTTCATCTTTGAATGTTGACGCTATTTTGCCTCAGTGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR GCA 72 bp AGCTTAAATAACTGTTTTAGAGTTCATTTTTGTTGCTaGAGCCCAGTGAGCTCCCTAACTACTAGACTGAAG +
Preference number: 3 (lower is better)
Translates to: SLNNCFRVHFCC*SPVSSLTTRLK
Trigger: CTTCAGTCTAGTAGTTAGGGAGCTCACTGGGCTGCAGCAACAAAAATGAACTCTAAAACAGTTATTTAAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR GCA 72 bp CAAAGCTTAAATAACTGTTTTAGAGTTCATTTTTGTTaGTGCAGCCCAGTGAGCTCCCTAACTACTAGACTG +
Preference number: 3 (lower is better)
Translates to: QSLNNCFRVHFC*CSPVSSLTTRL
Trigger: CAGTCTAGTAGTTAGGGAGCTCACTGGGCTGCAGCAACAAAAATGAACTCTAAAACAGTTATTTAAGCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR GCA 72 bp TTCATTAGCAAAATCAATGTTCCAGTAACCGTTCACTaGTCCTTAGCAGAAGATACTTCTGGAGTTTCTGCA +
Preference number: 3 (lower is better)
Translates to: FISKINVPVTVH*SLAEDTSGVSA
Trigger: TGCAGAAACTCCAGAAGTATCTTCTGCTAAGGAGCAGTGAACGGTTACTGGAACATTGATTTTGCTAATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR CCA 72 bp CATGGATTATGGGTTGACTCCAAGAGAGATCTTTGTTaGCCTGTATGTATACAGGGATTTTTGAATACCCAA +
Preference number: 3 (lower is better)
Translates to: HGLWVDSKRDLC*PVCIQGFLNTQ
Trigger: TTGGGTATTCAAAAATCCCTGTATACATACAGGCCAACAAAGATCTCTCTTGGAGTCAACCCATAATCCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR CCA 72 bp TTTAATCACAATTTCTGTTCAGTGAGCCATGGATTATaGGTTGACTCCAAGAGAGATCTTTGTTGGCCTGTA +
Preference number: 3 (lower is better)
Translates to: FNHNFCSVSHGL*VDSKRDLCWPV
Trigger: TACAGGCCAACAAAGATCTCTCTTGGAGTCAACCCATAATCCATGGCTCACTGAACAGAAATTGTGATTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR CCA 72 bp GTACCCGATATCACAGTTAATTATTGCCAAGAGAGATaGAACCTTCTTAGCTTTATCCAGTGTCGTAACTCA +
Preference number: 3 (lower is better)
Translates to: VPDITVNYCQER*NLLSFIQCRNS
Trigger: TGAGTTACGACACTGGATAAAGCTAAGAAGGTTCCATCTCTCTTGGCAATAATTAACTGTGATATCGGGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR TCA 72 bp TCAATACTAGCATTCTCAGACTCAAGCAAGTCACAGTaGGTATTCAGCTCCTTTGTCAGATACAAATCAAAG +
Preference number: 3 (lower is better)
Translates to: SILAFSDSSKSQ*VFSSFVRYKSK
Trigger: CTTTGATTTGTATCTGACAAAGGAGCTGAATACTCACTGTGACTTGCTTGAGTCTGAGAATGCTAGTATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR GCA 72 bp AAAGAATCAGTCGTACCCGATATCACAGTTAATTATTaGCAAGAGAGATGGAACCTTCTTAGCTTTATCCAG +
Preference number: 3 (lower is better)
Translates to: KESVVPDITVNY*QERWNLLSFIQ
Trigger: CTGGATAAAGCTAAGAAGGTTCCATCTCTCTTGGCAATAATTAACTGTGATATCGGGTACGACTGATTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR TCA 72 bp AAAATAGAGATTGCTTTAATCACAATTTCTGTTCAGTaGGCCATGGATTATGGGTTGACTCCAAGAGAGATC +
Preference number: 3 (lower is better)
Translates to: KIEIALITISVQ*AMDYGLTPREI
Trigger: GATCTCTCTTGGAGTCAACCCATAATCCATGGCTCACTGAACAGAAATTGTGATTAAAGCAATCTCTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR TCA 72 bp CAGCTATTTCCTACTATTTGCTCATTGGAGTGTTGTTaGATGGACAAAGATACTGTAAATACTGACGTGAAG +
Preference number: 3 (lower is better)
Translates to: QLFPTICSLECC*MDKDTVNTDVK
Trigger: CTTCACGTCAGTATTTACAGTATCTTTGTCCATTCAACAACACTCCAATGAGCAAATAGTAGGAAATAGCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR CCA 72 bp AGTAACCGTTCACTGCTCCTTAGCAGAAGATACTTCTaGAGTTTCTGCAAATTACAATACAATGAAATTCAG +
Preference number: 3 (lower is better)
Translates to: SNRSLLLSRRYF*SFCKLQYNEIQ
Trigger: CTGAATTTCATTGTATTGTAATTTGCAGAAACTCCAGAAGTATCTTCTGCTAAGGAGCAGTGAACGGTTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR-3UTR CAA 90 bp AAGAAAGTATTTGTGAGTTTACCATTTCACATTATCATCACTAGGATCCTCTCCCAACATCTTAAAGTGTaGCAGAGAAACATGTCTGGA +
Preference number: 3 (lower is better)
Translates to: KKVFVSLPFHIIITRILSQHLKV*QRNMSG
Trigger: TCCAGACATGTTTCTCTGCAACACTTTAAGATGTTG...GGAGAGGATCCTAGTGATGATAATGTGAAATGGTAAACTCACAAATACTTTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111835.4
ENSMUST00000226303.2
ENSMUST00000226785.2
ENSMUST00000226873.2
3UTR-3UTR CAA 90 bp AAAAGTTGTTTAAATGGGGATGTATCTCTCATCTTTGTAAGGTGCTATTACAGCCAACATCTTAAAGTGTaGCAGAGAAACATGTCTGGA +
Preference number: 3 (lower is better)
Translates to: KSCLNGDVSLIFVRCYYSQHLKV*QRNMSG
Trigger: TCCAGACATGTTTCTCTGCAACACTTTAAGATGTTG...GCTGTAATAGCACCTTACAAAGATGAGAGATACATCCCCATTTAAACAACTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR-3UTR CAA 90 bp ATCTTGCACTTTTTGGGTCATATATTTAGGAGAATGTGGCATCCCTTACATAAATTGCTCATTGGAGTGTaGTTGAATGGACAAAGATAC +
Preference number: 3 (lower is better)
Translates to: ILHFLGHIFRRMWHPLHKLLIGV*LNGQRY
Trigger: GTATCTTTGTCCATTCAACAACACTCCAATGAGCAA...TTTATGTAAGGGATGCCACATTCTCCTAAATATATGACCCAAAAAGTGCAAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR-3UTR CAA 90 bp ATCTTGCACTTTTTGGGTCATATATTTAGGAGAATGTGGCATCCCTTACATAAAACTAAGTGTAAAGTTTaGTGCAGATACTGTACCACC +
Preference number: 3 (lower is better)
Translates to: ILHFLGHIFRRMWHPLHKTKCKV*CRYCTT
Trigger: GGTGGTACAGTATCTGCACAAAACTTTACACTTAGT...TTTATGTAAGGGATGCCACATTCTCCTAAATATATGACCCAAAAAGTGCAAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR-3UTR CAA 90 bp AAAAGTTGTTTAAATGGGGATGTATCTCTCATCTTTGTAAGGTGCTATTACAGCGGAGTAATCTTCAGTTaGATCCCAAGAAAGCAGAAA +
Preference number: 3 (lower is better)
Translates to: KSCLNGDVSLIFVRCYYSGVIFS*IPRKQK
Trigger: TTTCTGCTTTCTTGGGATCAAACTGAAGATTACTCC...GCTGTAATAGCACCTTACAAAGATGAGAGATACATCCCCATTTAAACAACTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR-3UTR CAA 90 bp ATCTTGCACTTTTTGGGTCATATATTTAGGAGAATGTGGCATCCCTTACATAAAAAGTGGAAAACTGTTTaGTTAAAGTACACTGAAGCC +
Preference number: 3 (lower is better)
Translates to: ILHFLGHIFRRMWHPLHKKWKTV*LKYTEA
Trigger: GGCTTCAGTGTACTTTAACAAAACAGTTTTCCACTT...TTTATGTAAGGGATGCCACATTCTCCTAAATATATGACCCAAAAAGTGCAAGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR GCA 72 bp GTGACTGGATCACTCAACTGTAATAGTCATGTATCATaGCTAAGACCAGATATTACTACGATGAATTTAAAA +
Preference number: 3 (lower is better)
Translates to: VTGSLNCNSHVS*LRPDITTMNLK
Trigger: TTTTAAATTCATCGTAGTAATATCTGGTCTTAGGCATGATACATGACTATTACAGTTGAGTGATCCAGTCAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR CAA 72 bp CCACCACGTGGTTGCTGGGAGTTGAACTCAGGACCTTaGGAAGAGCAGGCCTCTGCGCCATCTCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PPRGCWELNSGP*EEQASAPSLQP
Trigger: GGGCTGGAGAGATGGCGCAGAGGCCTGCTCTTCCAAAGGTCCTGAGTTCAACTCCCAGCAACCACGTGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR CAA 72 bp CCTTTGGTGGGTCATGTTCATCAACACAGACCCCTGTaGCTGCAGTGCCACGGACCCACAGGCTGGGACTTC +
Preference number: 4 (lower is better)
Translates to: PLVGHVHQHRPL*LQCHGPTGWDF
Trigger: GAAGTCCCAGCCTGTGGGTCCGTGGCACTGCAGCAACAGGGGTCTGTGTTGATGAACATGACCCACCAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CAA 72 bp ACTCACGTCTCCGGGTATCTTCTGCTCTACCCACGCTaGGTGGTGGCAGGCAAGGGTCATCTCCAGAATGTC +
Preference number: 4 (lower is better)
Translates to: THVSGYLLLYPR*VVAGKGHLQNV
Trigger: GACATTCTGGAGATGACCCTTGCCTGCCACCACCAAGCGTGGGTAGAGCAGAAGATACCCGGAGACGTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CAA 72 bp GTACCCCTGGCTGTCCTGGAACTCTGCAAACTCTGTTaGCAGACCCAAAGCCACAGAGACCCACTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: VPLAVLELCKLC*QTQSHRDPLAS
Trigger: GGAGGCAAGTGGGTCTCTGTGGCTTTGGGTCTGCAAACAGAGTTTGCAGAGTTCCAGGACAGCCAGGGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
CDS-3UTR TCA 90 bp CATCAACACAGACCCCTGTTGCTGCAGTGCCACGGACCCACAGGCTGGGACTTCCCTGTGGTACCAGAATaGACAGCTAAGGACCTTTCT +
Preference number: 4 (lower is better)
Translates to: HQHRPLLLQCHGPTGWDFPVVPE*TAKDLS
Trigger: AGAAAGGTCCTTAGCTGTTCATTCTGGTACCACAGG...GAAGTCCCAGCCTGTGGGTCCGTGGCACTGCAGCAACAGGGGTCTGTGTTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CAA 72 bp AGGCTGCAACCCAGACCAGGGATGTCTGCATGGCCTTaGGTGGGTCATGTTCATCAACACAGACCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: RLQPRPGMSAWP*VGHVHQHRPLL
Trigger: CAACAGGGGTCTGTGTTGATGAACATGACCCACCAAAGGCCATGCAGACATCCCTGGTCTGGGTTGCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CAA 72 bp GCCTGTTGTTGTCCTGTGTCATGGAGATCCTGTAGCTaGGGATCTGCAGGACCAGCCCCTTCAAGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ACCCPVSWRSCS*GSAGPAPSSAP
Trigger: TGGAGCACTTGAAGGGGCTGGTCCTGCAGATCCCAAGCTACAGGATCTCCATGACACAGGACAACAACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
CDS-3UTR TCA 90 bp CACCCATGTAACAGTCCTCACAGGTCAGCCGTTCTGTGCGGTTGCCACTTGCATCAGGACAGCCAGAGCTaGAGTTGGTGGACAAATCCA +
Preference number: 4 (lower is better)
Translates to: HPCNSPHRSAVLCGCHLHQDSQS*SWWTNP
Trigger: TGGATTTGTCCACCAACTTCAGCTCTGGCTGTCCTG...ATGCAAGTGGCAACCGCACAGAACGGCTGACCTGTGAGGACTGTTACATGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111835.4
CDS-3UTR TCA 90 bp AACAGTCCTCACAGGTCAGCCGTTCTGTGCGGTTGCCACTTGCATGTTTCCAAAAGGGGCAGATCTCGCTaGATTCCAGGACAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: NSPHRSAVLCGCHLHVSKRGRSR*IPGQPE
Trigger: CTCTGGCTGTCCTGGAATTCAGCGAGATCTGCCCCT...TTTGGAAACATGCAAGTGGCAACCGCACAGAACGGCTGACCTGTGAGGACTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000111835.4
3UTR CAA 72 bp CCAGCATTGGGACTGAAGCTAGAGCTTCACACAGGTTaGGCAAGCAGCCTAGCACTCCAGCCTCTCATATGG +
Preference number: 4 (lower is better)
Translates to: PALGLKLELHTG*ASSLALQPLIW
Trigger: CCATATGAGAGGCTGGAGTGCTAGGCTGCTTGCCAAACCTGTGTGAAGCTCTAGCTTCAGTCCCAATGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR CAA 72 bp CAGAAGAGGGCACCAGATCTCATAGCCACCACGTGGTaGCTGGGAGTTGAACTCAGGACCTTTGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: QKRAPDLIATTW*LGVELRTFGRA
Trigger: TGCTCTTCCAAAGGTCCTGAGTTCAACTCCCAGCAACCACGTGGTGGCTATGAGATCTGGTGCCCTCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR CAA 72 bp GTTCAGAACGCTTGTGGCTCTTGCAGAGGACCAGGTTaGATTCTCAGACCCACAGGGCAGCTCACAACTATC +
Preference number: 4 (lower is better)
Translates to: VQNACGSCRGPG*ILRPTGQLTTI
Trigger: GATAGTTGTGAGCTGCCCTGTGGGTCTGAGAATCAAACCTGGTCCTCTGCAAGAGCCACAAGCGTTCTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226603.2
CDS-3UTR GCA 90 bp ACAGTCCTCACAGGTCAGCCGTTCTGTGCGGTTGCCACTTGCATGTTTCCAAAGGAATGCACAGTGATATaGCTGCCTTTGCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: TVLTGQPFCAVATCMFPKECTVI*LPLLQR
Trigger: CCTCTGAAGCAAAGGCAGGCATATCACTGTGCATTC...CTTTGGAAACATGCAAGTGGCAACCGCACAGAACGGCTGACCTGTGAGGACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111835.4
CDS-3UTR CCA 90 bp GGATCTGCAGGACCAGCCCCTTCAAGTGCTCCAGCAGTTCATGGATGGGGTAGAATACCTGCATTCCCATaGACAAGAACTTTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GSAGPAPSSAPAVHGWGRIPAFP*TRTFPP
Trigger: TGGAGGAAAAGTTCTTGTCCATGGGAATGCAGGTAT...TCTACCCCATCCATGAACTGCTGGAGCACTTGAAGGGGCTGGTCCTGCAGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CAA 72 bp AGTCCTCACAGGTCAGCCGTTCTGTGCGGTTGCCACTaGCATGTTTCCAAAGTCGTCATCTTCCTCATGTGT +
Preference number: 4 (lower is better)
Translates to: SPHRSAVLCGCH*HVSKVVIFLMC
Trigger: ACACATGAGGAAGATGACGACTTTGGAAACATGCAAGTGGCAACCGCACAGAACGGCTGACCTGTGAGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111835.4
ENSMUST00000226303.2
ENSMUST00000226785.2
3UTR CAA 72 bp TATTGCCCGGAGAGATGGCTTAGTGGTTCAGAACGCTaGTGGCTCTTGCAGAGGACCAGGTTTGATTCTCAG +
Preference number: 4 (lower is better)
Translates to: YCPERWLSGSER*WLLQRTRFDSQ
Trigger: CTGAGAATCAAACCTGGTCCTCTGCAAGAGCCACAAGCGTTCTGAACCACTAAGCCATCTCTCCGGGCAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226603.2
3UTR CAA 72 bp CAGATAGATGAGCCAGCAATAAGATGGCTCAAGAGGTaGGCCACCAAGCCCAACAACCCAAGTCCTAGCACT +
Preference number: 4 (lower is better)
Translates to: QIDEPAIRWLKR*ATKPNNPSPST
Trigger: AGTGCTAGGACTTGGGTTGTTGGGCTTGGTGGCCAACCTCTTGAGCCATCTTATTGCTGGCTCATCTATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
CDS-3UTR GCA 90 bp AGCCGTTCTGTGCGGTTGCCACTTGCATGTTTCCAAAGTCGTCATCTTCCTCATCCAGGCAAAACTTCCTaGATCTCTCGTCTCATAGGG +
Preference number: 4 (lower is better)
Translates to: SRSVRLPLACFQSRHLPHPGKTS*ISRLIG
Trigger: CCCTATGAGACGAGAGATGCAGGAAGTTTTGCCTGG...ATGAGGAAGATGACGACTTTGGAAACATGCAAGTGGCAACCGCACAGAACGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111835.4
ENSMUST00000226303.2
ENSMUST00000226785.2
3UTR CAA 72 bp AACTCTGTTTGCAGACCCAAAGCCACAGAGACCCACTaGCCTCCTGAGTGCTGGGAGACAAGTCTCATTAAT +
Preference number: 4 (lower is better)
Translates to: NSVCRPKATETH*PPECWETSLIN
Trigger: ATTAATGAGACTTGTCTCCCAGCACTCAGGAGGCAAGTGGGTCTCTGTGGCTTTGGGTCTGCAAACAGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
CDS-3UTR TCA 90 bp GGGACTTCACCATGGTGTCACATGAGAGAGCAGGCTACTCACATCAGGCTGTTCATGGCTTCATATTCCTaGAGTTGGTGGACAAATCCA +
Preference number: 4 (lower is better)
Translates to: GTSPWCHMREQATHIRLFMASYS*SWWTNP
Trigger: TGGATTTGTCCACCAACTTCAGGAATATGAAGCCAT...GAACAGCCTGATGTGAGTAGCCTGCTCTCTCATGTGACACCATGGTGAAGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
CDS-3UTR GCA 90 bp GTTCTGTGCGGTTGCCACTTGCATGTTTCCAAAGTCGTCATCTTCCTCATGTGTCCAGGCAAAACTTCCTaGATCTCTCGTCTCATAGGG +
Preference number: 4 (lower is better)
Translates to: VLCGCHLHVSKVVIFLMCPGKTS*ISRLIG
Trigger: CCCTATGAGACGAGAGATGCAGGAAGTTTTGCCTGG...ACACATGAGGAAGATGACGACTTTGGAAACATGCAAGTGGCAACCGCACAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111835.4
ENSMUST00000226303.2
ENSMUST00000226785.2
CDS-3UTR GCA 90 bp CATGTAACAGTCCTCACAGGTCAGCCGTTCTGTGCGGTTGCCACTTGCATGTTTCGTCTCCATGATGTATaGAATGACAAAGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: HVTVLTGQPFCAVATCMFRLHDV*NDKGST
Trigger: AGTGCTGCCTTTGTCATTGCATACATCATGGAGACG...AAACATGCAAGTGGCAACCGCACAGAACGGCTGACCTGTGAGGACTGTTACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111835.4
CDS-3UTR GCA 90 bp CAAGTGCTCCAGCAGTTCATGGATGGGGTAGATGTTGGGGTGAACCAACTCAAATGTGCGGTTGCCACTTaGATGTTTCCAAAGTCGTCA +
Preference number: 4 (lower is better)
Translates to: QVLQQFMDGVDVGVNQLKCAVAT*MFPKSS
Trigger: TGACGACTTTGGAAACATGCAAGTGGCAACCGCACA...TTTGAGTTGGTTCACCCCAACATCTACCCCATCCATGAACTGCTGGAGCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CAA 72 bp CAGAAAGGAGAGAACTACAGGAAACAACCTTCACCCTaGTGCTGCTGGTGTGTCCCTCCGCCCATAATAAAA +
Preference number: 4 (lower is better)
Translates to: QKGENYRKQPSP*CCWCVPPPIIK
Trigger: TTTTATTATGGGCGGAGGGACACACCAGCAGCACAAGGGTGAAGGTTGTTTCCTGTAGTTCTCTCCTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
CDS-3UTR GCA 90 bp CCTCTACAGGCCCCAGGCACACATGTAGTGCACATCCATACATGTAGATATAAACCAGGCAAAACTTCCTaGATCTCTCGTCTCATAGGG +
Preference number: 4 (lower is better)
Translates to: PLQAPGTHVVHIHTCRYKPGKTS*ISRLIG
Trigger: CCCTATGAGACGAGAGATGCAGGAAGTTTTGCCTGG...TTTATATCTACATGTATGGATGTGCACTACATGTGTGCCTGGGGCCTGTAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226603.2
CDS-3UTR CCA 90 bp CATGTAACAGTCCTCACAGGTCAGCCGTTCTGTGCGGTTGCCACTTGCATGTTTATACCTGCATTCCCATaGACAAGAACTTTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: HVTVLTGQPFCAVATCMFIPAFP*TRTFPP
Trigger: TGGAGGAAAAGTTCTTGTCCATGGGAATGCAGGTAT...AAACATGCAAGTGGCAACCGCACAGAACGGCTGACCTGTGAGGACTGTTACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111835.4
CDS-3UTR GCA 90 bp GCCATGGATTATGGGTTGACTCCAAGAGAGATCTTTGTTGGCCTGTATGTATACCCAGGCAAAACTTCCTaGATCTCTCGTCTCATAGGG +
Preference number: 4 (lower is better)
Translates to: AMDYGLTPREIFVGLYVYPGKTS*ISRLIG
Trigger: CCCTATGAGACGAGAGATGCAGGAAGTTTTGCCTGG...GTATACATACAGGCCAACAAAGATCTCTCTTGGAGTCAACCCATAATCCATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226785.2
ENSMUST00000226873.2
CDS-3UTR TCA 90 bp CAAGTGCTCCAGCAGTTCATGGATGGGGTAGATGTTGGGGTGAACCAACTCAAAGTTATGCCATGTTTCTaGAGTATAGGTAGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: QVLQQFMDGVDVGVNQLKVMPCF*SIGSLL
Trigger: AAGCAAGCTACCTATACTTCAGAAACATGGCATAAC...TTTGAGTTGGTTCACCCCAACATCTACCCCATCCATGAACTGCTGGAGCACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
CDS-3UTR CCA 90 bp GGCATGATGAAACTGCAGCCTCTGGTTTGTGTGTCTGTGGGCATTACATGTGTATCTTCACACTACCTGTaGTACCAGAATGAACAGCTA +
Preference number: 4 (lower is better)
Translates to: GMMKLQPLVCVSVGITCVSSHYL*YQNEQL
Trigger: TAGCTGTTCATTCTGGTACCACAGGTAGTGTGAAGA...TACACATGTAATGCCCACAGACACACAAACCAGAGGCTGCAGTTTCATCATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CAA 72 bp GCGTGTCCCTCAATACACCCTGTTGTTCATACATCTTaGTTTGCAAACGTTCATTGTGATGAGTCACTGGCG +
Preference number: 4 (lower is better)
Translates to: ACPSIHPVVHTS*FANVHCDESLA
Trigger: CGCCAGTGACTCATCACAATGAACGTTTGCAAACAAAGATGTATGAACAACAGGGTGTATTGAGGGACACGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
3UTR CAA 72 bp TCACATGGTATTAGAATTATCCAGGGTCCTTTTCATTaGTCAATGAGCAGCTCCCAGAGCTGCTACCCTGGT +
Preference number: 4 (lower is better)
Translates to: SHGIRIIQGPFH*SMSSSQSCYPG
Trigger: ACCAGGGTAGCAGCTCTGGGAGCTGCTCATTGACAAATGAAAAGGACCCTGGATAATTCTAATACCATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
CDS-3UTR TCA 90 bp TACACTGAAGCCACCCACAAATTGCTTTCCCCAATGGATACATCTTCAAAGCAACCTGTGGTACCAGAATaGACAGCTAAGGACCTTTCT +
Preference number: 4 (lower is better)
Translates to: YTEATHKLLSPMDTSSKQPVVPE*TAKDLS
Trigger: AGAAAGGTCCTTAGCTGTTCATTCTGGTACCACAGG...TTGCTTTGAAGATGTATCCATTGGGGAAAGCAATTTGTGGGTGGCTTCAGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
CDS-3UTR GCA 90 bp CAGTGCCATCTACTGCATAAGTCCAACATCTTAAAGTGTTGCAGAGAAACATGTCCAGGCAAAACTTCCTaGATCTCTCGTCTCATAGGG +
Preference number: 4 (lower is better)
Translates to: QCHLLHKSNILKCCRETCPGKTS*ISRLIG
Trigger: CCCTATGAGACGAGAGATGCAGGAAGTTTTGCCTGG...ACATGTTTCTCTGCAACACTTTAAGATGTTGGACTTATGCAGTAGATGGCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111835.4
ENSMUST00000226303.2
ENSMUST00000226785.2
ENSMUST00000226873.2
CDS-3UTR GCA 90 bp GCCATGGATTATGGGTTGACTCCAAGAGAGATCTTTGTTGGCCTGTATGTATACCGTCTCCATGATGTATaGAATGACAAAGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: AMDYGLTPREIFVGLYVYRLHDV*NDKGST
Trigger: AGTGCTGCCTTTGTCATTGCATACATCATGGAGACG...GTATACATACAGGCCAACAAAGATCTCTCTTGGAGTCAACCCATAATCCATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
CDS-3UTR GCA 90 bp GTGTCAGCGTGTCCCTCAATACACCCTGTTGTTCATACATCTTTGTTTGCAAACCGTCTCCATGATGTATaGAATGACAAAGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: VSACPSIHPVVHTSLFANRLHDV*NDKGST
Trigger: AGTGCTGCCTTTGTCATTGCATACATCATGGAGACG...GTTTGCAAACAAAGATGTATGAACAACAGGGTGTATTGAGGGACACGCTGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
CDS-3UTR CCA 90 bp GTGAGCCATGGATTATGGGTTGACTCCAAGAGAGATCTTTGTTGGCCTGTATGTATACCTGCATTCCCATaGACAAGAACTTTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: VSHGLWVDSKRDLCWPVCIPAFP*TRTFPP
Trigger: TGGAGGAAAAGTTCTTGTCCATGGGAATGCAGGTAT...ACATACAGGCCAACAAAGATCTCTCTTGGAGTCAACCCATAATCCATGGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR CAA 72 bp GCTGTAGTGTGTCAGCGTGTCCCTCAATACACCCTGTaGTTCATACATCTTTGTTTGCAAACGTTCATTGTG +
Preference number: 4 (lower is better)
Translates to: AVVCQRVPQYTL*FIHLCLQTFIV
Trigger: CACAATGAACGTTTGCAAACAAAGATGTATGAACAACAGGGTGTATTGAGGGACACGCTGACACACTACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
CDS-3UTR TCA 90 bp GTGAGCCATGGATTATGGGTTGACTCCAAGAGAGATCTTTGTTGGCCTGTATGTGTTATGCCATGTTTCTaGAGTATAGGTAGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: VSHGLWVDSKRDLCWPVCVMPCF*SIGSLL
Trigger: AAGCAAGCTACCTATACTTCAGAAACATGGCATAAC...ACATACAGGCCAACAAAGATCTCTCTTGGAGTCAACCCATAATCCATGGCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
CDS-3UTR GCA 90 bp TGCCATCTACTGCATAAGTCCAACATCTTAAAGTGTTGCAGAGAAACATGTCTGTGTGCGGTTGCCACTTaGATGTTTCCAAAGTCGTCA +
Preference number: 4 (lower is better)
Translates to: CHLLHKSNILKCCRETCLCAVAT*MFPKSS
Trigger: TGACGACTTTGGAAACATGCAAGTGGCAACCGCACA...CAGACATGTTTCTCTGCAACACTTTAAGATGTTGGACTTATGCAGTAGATGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
CDS-3UTR TCA 90 bp TACACTGAAGCCACCCACAAATTGCTTTCCCCAATGGATACATCTTCAAAGCAAATGGCTTCATATTCCTaGAGTTGGTGGACAAATCCA +
Preference number: 4 (lower is better)
Translates to: YTEATHKLLSPMDTSSKQMASYS*SWWTNP
Trigger: TGGATTTGTCCACCAACTTCAGGAATATGAAGCCAT...TTGCTTTGAAGATGTATCCATTGGGGAAAGCAATTTGTGGGTGGCTTCAGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
CDS-3UTR CCA 90 bp GTCGTACCCGATATCACAGTTAATTATTGCCAAGAGAGATGGAACCTTCTTAGCTCTTCACACTACCTGTaGTACCAGAATGAACAGCTA +
Preference number: 4 (lower is better)
Translates to: VVPDITVNYCQERWNLLSSSHYL*YQNEQL
Trigger: TAGCTGTTCATTCTGGTACCACAGGTAGTGTGAAGA...GCTAAGAAGGTTCCATCTCTCTTGGCAATAATTAACTGTGATATCGGGTACGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR CAA 72 bp AGTGAGACCCTGCCTCAAAAGCTCAATTTACTTCACTaGCTTTCACTGAGGCAAAATAGCGTCAACATTCAA +
Preference number: 4 (lower is better)
Translates to: SETLPQKLNLLH*LSLRQNSVNIQ
Trigger: TTGAATGTTGACGCTATTTTGCCTCAGTGAAAGCAAGTGAAGTAAATTGAGCTTTTGAGGCAGGGTCTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
CDS-3UTR TCA 90 bp GACATAAGCAAATGCATCTCTGTATTTCATCCCAAACGTCTCCATGATGTATGCGTTATGCCATGTTTCTaGAGTATAGGTAGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: DISKCISVFHPKRLHDVCVMPCF*SIGSLL
Trigger: AAGCAAGCTACCTATACTTCAGAAACATGGCATAAC...GCATACATCATGGAGACGTTTGGGATGAAATACAGAGATGCATTTGCTTATGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226603.2
CDS-3UTR TCA 90 bp AAGAAAGTATTTGTGAGTTTACCATTTCACATTATCATCACTAGGATCCTCTCCGTTATGCCATGTTTCTaGAGTATAGGTAGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: KKVFVSLPFHIIITRILSVMPCF*SIGSLL
Trigger: AAGCAAGCTACCTATACTTCAGAAACATGGCATAAC...GGAGAGGATCCTAGTGATGATAATGTGAAATGGTAAACTCACAAATACTTTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000111835.4
ENSMUST00000226873.2
3UTR CAA 72 bp ATACATCTAAATAGACTTAAGGTGCACCATTTCTCATaGGACACTTCTGTTATCATGACCACCAGATACATA +
Preference number: 4 (lower is better)
Translates to: IHLNRLKVHHFS*DTSVIMTTRYI
Trigger: TATGTATCTGGTGGTCATGATAACAGAAGTGTCCAATGAGAAATGGTGCACCTTAAGTCTATTTAGATGTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR CAA 72 bp TCATCTGAAAGAACTCAGTCTTACTTTGCTAGCAGATaGTATGTGTGTTTCTGCAAACTAAACCAAGTAACA +
Preference number: 4 (lower is better)
Translates to: SSERTQSYFASR*YVCFCKLNQVT
Trigger: TGTTACTTGGTTTAGTTTGCAGAAACACACATACAATCTGCTAGCAAAGTAAGACTGAGTTCTTTCAGATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
3UTR CAA 72 bp TATCTTACAAGTGATATATTCAGTGGAGTGAGAATCTaGCACTTTTTGGGTCATATATTTAGGAGAATGTGG +
Preference number: 4 (lower is better)
Translates to: YLTSDIFSGVRI*HFLGHIFRRMW
Trigger: CCACATTCTCCTAAATATATGACCCAAAAAGTGCAAGATTCTCACTCCACTGAATATATCACTTGTAAGATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226873.2
CDS-3UTR CAA 90 bp AGTCCTCACAGGTCAGCCGTTCTGTGCGGTTGCCACTTGCATGTTTCCAAAGTCGTGATATGCCTGCCTTaGCTTCAGAGGCAGAGGGGC +
Preference number: 5 (lower is better)
Translates to: SPHRSAVLCGCHLHVSKVVICLP*LQRQRG
Trigger: GCCCCTCTGCCTCTGAAGCAAAGGCAGGCATATCAC...GACTTTGGAAACATGCAAGTGGCAACCGCACAGAACGGCTGACCTGTGAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111835.4
CDS TCA 90 bp GTGATATGCCTGCCTTTGCTTCAGAGGCAGAGGGGCAGATCTCGCTaGATTCCAGGACAGCCAGAGCTGAAGTTGGTGGACAAATCCAGC +
Preference number: 5 (lower is better)
Translates to: VICLPLLQRQRGRSR*IPGQPELKLVDKSS
Trigger: GCTGGATTTGTCCACCAACTTCAGCTCTGGCTGTCCTGGAATTCAGCGAGATCTGCCCCTCTGCCTCTGAAGCAAAGGCAGGCATATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111835.4
CDS-3UTR CAA 90 bp GTGTCATGGAGATCCTGTAGCTTGGGATCTGCAGGACCAGCCCCTTCAAGTGCTAGCCGTTCTGTGCGGTaGCCACTTGCATGTTTCCAA +
Preference number: 5 (lower is better)
Translates to: VSWRSCSLGSAGPAPSSASRSVR*PLACFQ
Trigger: TTGGAAACATGCAAGTGGCAACCGCACAGAACGGCT...AGCACTTGAAGGGGCTGGTCCTGCAGATCCCAAGCTACAGGATCTCCATGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228311.2
CDS-3UTR CAA 90 bp GCAATGACAAAGGCAGCACTTCTAGAGATACCTGCATTCCCATGGACAAGAACTTACATAGTGAAACCCTaGCTTTTCATAGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: AMTKAALLEIPAFPWTRTYIVKP*LFIAEE
Trigger: CTCTTCTGCTATGAAAAGCAAGGGTTTCACTATGTA...AGTTCTTGTCCATGGGAATGCAGGTATCTCTAGAAGTGCTGCCTTTGTCATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226303.2
CDS-3UTR CAA 90 bp AAGAAAGTATTTGTGAGTTTACCATTTCACATTATCATCACTAGGATCCTCTCCCAGCCAGAGCTGAAGTaGGTGGACAAATCCAGCATT +
Preference number: 5 (lower is better)
Translates to: KKVFVSLPFHIIITRILSQPELK*VDKSSI
Trigger: AATGCTGGATTTGTCCACCAACTTCAGCTCTGGCTG...GGAGAGGATCCTAGTGATGATAATGTGAAATGGTAAACTCACAAATACTTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111835.4
CDS TCA 72 bp CTGCCTTTGCTTCAGAGGCAGAGGGGCAGATCTCGCTaGATTCCAGGACAGCCAGAGCTGAAGTTGGTGGAC +
Preference number: 6 (lower is better)
Translates to: LPLLQRQRGRSR*IPGQPELKLVD
Trigger: GTCCACCAACTTCAGCTCTGGCTGTCCTGGAATTCAGCGAGATCTGCCCCTCTGCCTCTGAAGCAAAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111835.4