Pregenerated sensors for STYK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032899Ensembl transcript IDs: ENSMUST00000049150.8, ENSMUST00000121078.2
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACACACACACTTTTTATCCCTGGTTCTAGCTTTGGCTCTATAGGCTaGTTCTCCTTAGTCTTACAGGAACTGGCAAACAAATGGGATGAA | + |
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Preference number: 1 (lower is better) Translates to: THTLFIPGSSFGSIG*FSLVLQELANKWDE Trigger: TTCATCCCATTTGTTTGCCAGTTCCTGTAAGACTAAGGAGAATCAGCCTATAGAGCCAAAGCTAGAACCAGGGATAAAAAGTGTGTGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| 3UTR GCA 90 bp | TTAGTATCATGCATGGTCCACCTGCCTCAGAGTTCAATGAAAGGATaGTCTTCTATCTATAGTCAAGGAAAGGCTCAGTATTGTTTCTTA | + |
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Preference number: 1 (lower is better) Translates to: LVSCMVHLPQSSMKG*SSIYSQGKAQYCFL Trigger: TAAGAAACAATACTGAGCCTTTCCTTGACTATAGATAGAAGAGCATCCTTTCATTGAACTCTGAGGCAGGTGGACCATGCATGATACTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| 3UTR-3UTR CCA 90 bp | ACCACCTGGGTTACTAAGTCTTCTTGCTCGACTTTCATGCTTCCTATTTGTTATAGTAGTAAACCAGCCTaGAGTGAGTGGGACCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: TTWVTKSSCSTFMLPICYSSKPA*SEWDQP Trigger: GGGCTGGTCCCACTCACTCCAGGCTGGTTTACTACT...ATAACAAATAGGAAGCATGAAAGTCGAGCAAGAAGACTTAGTAACCCAGGTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTTAATGACCACCTGGGTTACTAAGTCTTCTTGCTCGACTTTCATGCTTCCTTGGGACCAGCCCTTTTaGCTAATTCCCTTACAATCA | + |
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Preference number: 2 (lower is better) Translates to: LLMTTWVTKSSCSTFMLPWDQPF*LIPLQS Trigger: TGATTGTAAGGGAATTAGGCAAAAGGGCTGGTCCCA...AGGAAGCATGAAAGTCGAGCAAGAAGACTTAGTAACCCAGGTGGTCATTAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| 3UTR-3UTR GCA 90 bp | CTTATACTTCAGCCCTTGGGACTGGAAAGCAAACTACAATTGATGGTGATTCTTATGTTTAGGGAAAGATaGAAGATCCATGTCCTTTTT | + |
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Preference number: 2 (lower is better) Translates to: LILQPLGLESKLQLMVILMFRER*KIHVLF Trigger: AAAAAGGACATGGATCTTGCATCTTTCCCTAAACAT...AAGAATCACCATCAATTGTAGTTTGCTTTCCAGTCCCAAGGGCTGAAGTATAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| 3UTR GCA 72 bp | TGCATGGTCCACCTGCCTCAGAGTTCAATGAAAGGATaGTCTTCTATCTATAGTCAAGGAAAGGCTCAGTAT | + |
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Preference number: 3 (lower is better) Translates to: CMVHLPQSSMKG*SSIYSQGKAQY Trigger: ATACTGAGCCTTTCCTTGACTATAGATAGAAGAGCATCCTTTCATTGAACTCTGAGGCAGGTGGACCATGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| 3UTR TCA 72 bp | CTTTTTATCCCTGGTTCTAGCTTTGGCTCTATAGGCTaGTTCTCCTTAGTCTTACAGGAACTGGCAAACAAA | + |
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Preference number: 3 (lower is better) Translates to: LFIPGSSFGSIG*FSLVLQELANK Trigger: TTTGTTTGCCAGTTCCTGTAAGACTAAGGAGAATCAGCCTATAGAGCCAAAGCTAGAACCAGGGATAAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| 3UTR-3UTR CAA 90 bp | CTCTTAATGACCACCTGGGTTACTAAGTCTTCTTGCTCGACTTTCATGCTTCCTGAAAGCAAACTACAATaGATGGTGATTCTTAGCTCA | + |
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Preference number: 3 (lower is better) Translates to: LLMTTWVTKSSCSTFMLPESKLQ*MVILSS Trigger: TGAGCTAAGAATCACCATCAATTGTAGTTTGCTTTC...AGGAAGCATGAAAGTCGAGCAAGAAGACTTAGTAACCCAGGTGGTCATTAAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| 3UTR-3UTR CAA 90 bp | ACAAATGGGATGAACAATGTTCCTAATCATGAAATGACTCCTCCTGCTTCTAATCTTATACTTCAGCCCTaGGGACTGGAAAGCAAACTA | + |
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Preference number: 3 (lower is better) Translates to: TNGMNNVPNHEMTPPASNLILQP*GLESKL Trigger: TAGTTTGCTTTCCAGTCCCAAGGGCTGAAGTATAAG...ATTAGAAGCAGGAGGAGTCATTTCATGATTAGGAACATTGTTCATCCCATTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| 3UTR GCA 72 bp | TACCTCTTAATGACCACCTGGGTTACTAAGTCTTCTTaGTCGACTTTCATGCTTCCTATTTGTTATACACAC | + |
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Preference number: 3 (lower is better) Translates to: YLLMTTWVTKSS*STFMLPICYTH Trigger: GTGTGTATAACAAATAGGAAGCATGAAAGTCGAGCAAGAAGACTTAGTAACCCAGGTGGTCATTAAGAGGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| 3UTR CCA 72 bp | AAGATTACTTCTTCTCTGTACCTCTTAATGACCACCTaGGTTACTAAGTCTTCTTGCTCGACTTTCATGCTT | + |
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Preference number: 3 (lower is better) Translates to: KITSSLYLLMTT*VTKSSCSTFML Trigger: AAGCATGAAAGTCGAGCAAGAAGACTTAGTAACCCAGGTGGTCATTAAGAGGTACAGAGAAGAAGTAATCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| 3UTR GCA 72 bp | CCACCTGGGTTACTAAGTCTTCTTGCTCGACTTTCATaGTTCCTATTTGTTATACACACACACACTTTTTAT | + |
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Preference number: 3 (lower is better) Translates to: PPGLLSLLARLS*FLFVIHTHTFY Trigger: ATAAAAAGTGTGTGTGTGTATAACAAATAGGAAGCATGAAAGTCGAGCAAGAAGACTTAGTAACCCAGGTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| CDS-3UTR TCA 90 bp | CTCCCTTGGTGGGCCACAGAAAGTTCCTTCTCTCTGTTCTTGAAGGAACTAATTAGGCGCTGGAGCAGCTaGCCAAGTAAGGGGCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LPWWATESSFSLFLKELIRRWSS*PSKGRL Trigger: CAGCCGCCCCTTACTTGGTCAGCTGCTCCAGCGCCT...AATTAGTTCCTTCAAGAACAGAGAGAAGGAACTTTCTGTGGCCCACCAAGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR TCA 90 bp | CTCCCTTGGTGGGCCACAGAAAGTTCCTTCTCTCTGTTCTTGAAGGAACTAATTAGGTCCAAAGAAAGCTaGGCAGGTCCCCTGGGACCA | + |
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Preference number: 4 (lower is better) Translates to: LPWWATESSFSLFLKELIRSKES*AGPLGP Trigger: TGGTCCCAGGGGACCTGCTCAGCTTTCTTTGGACCT...AATTAGTTCCTTCAAGAACAGAGAGAAGGAACTTTCTGTGGCCCACCAAGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR TCA 90 bp | CTCCCTTGGTGGGCCACAGAAAGTTCCTTCTCTCTGTTCTTGAAGGAACTAATTGCAGCCACATCCCCATaGAACAGGTGCTTCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LPWWATESSFSLFLKELIAATSP*NRCFSC Trigger: GCAGGAGAAGCACCTGTTTCATGGGGATGTGGCTGC...AATTAGTTCCTTCAAGAACAGAGAGAAGGAACTTTCTGTGGCCCACCAAGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR GCA 90 bp | ATACTTCAGCCCTTGGGACTGGAAAGCAAACTACAATTGATGGTGATTCTTAGCTGTTCCCTGGGCACCTaGAGCTTAGCCAGGCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: ILQPLGLESKLQLMVILSCSLGT*SLARRG Trigger: ACCCCGCCTGGCTAAGCTGCAGGTGCCCAGGGAACA...GCTAAGAATCACCATCAATTGTAGTTTGCTTTCCAGTCCCAAGGGCTGAAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| CDS-3UTR TCA 90 bp | CTCTTAATGACCACCTGGGTTACTAAGTCTTCTTGCTCGACTTTCATGCTTCCTAGGTCCAAAGAAAGCTaGGCAGGTCCCCTGGGACCA | + |
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Preference number: 4 (lower is better) Translates to: LLMTTWVTKSSCSTFMLPRSKES*AGPLGP Trigger: TGGTCCCAGGGGACCTGCTCAGCTTTCTTTGGACCT...AGGAAGCATGAAAGTCGAGCAAGAAGACTTAGTAACCCAGGTGGTCATTAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| CDS-3UTR TCA 90 bp | ATACTTCAGCCCTTGGGACTGGAAAGCAAACTACAATTGATGGTGATTCTTAGCGCAGCCACATCCCCATaGAACAGGTGCTTCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: ILQPLGLESKLQLMVILSAATSP*NRCFSC Trigger: GCAGGAGAAGCACCTGTTTCATGGGGATGTGGCTGC...GCTAAGAATCACCATCAATTGTAGTTTGCTTTCCAGTCCCAAGGGCTGAAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR TCA 90 bp | AGTCTTCTTGCTCGACTTTCATGCTTCCTATTTGTTATACACACACACACTTTTAGGCGCTGGAGCAGCTaGCCAAGTAAGGGGCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SLLARLSCFLFVIHTHTFRRWSS*PSKGRL Trigger: CAGCCGCCCCTTACTTGGTCAGCTGCTCCAGCGCCT...AAAAGTGTGTGTGTGTATAACAAATAGGAAGCATGAAAGTCGAGCAAGAAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| CDS-3UTR GCA 90 bp | TTTCTCCCTTGGTGGGCCACAGAAAGTTCCTTCTCTCTGTTCTTGAAGGAACTAGATGCCAGCCACATCTaGATACAGTTCAGGCACCAC | + |
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Preference number: 4 (lower is better) Translates to: FLPWWATESSFSLFLKELDASHI*IQFRHH Trigger: GTGGTGCCTGAACTGTATGCAGATGTGGCTGGCATC...TAGTTCCTTCAAGAACAGAGAGAAGGAACTTTCTGTGGCCCACCAAGGGAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR CCA 90 bp | ACCACCTGGGTTACTAAGTCTTCTTGCTCGACTTTCATGCTTCCTATTTGTTATGCTGAGCAGGTCCCCTaGGACCACATCCTCCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: TTWVTKSSCSTFMLPICYAEQVP*DHILQH Trigger: ATGCTGGAGGATGTGGTCCCAGGGGACCTGCTCAGC...ATAACAAATAGGAAGCATGAAAGTCGAGCAAGAAGACTTAGTAACCCAGGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| CDS-3UTR CCA 90 bp | CTCCCTTGGTGGGCCACAGAAAGTTCCTTCTCTCTGTTCTTGAAGGAACTAATTCAGGAGAAGCCTTTCTaGAGCAAGCCACTTGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: LPWWATESSFSLFLKELIQEKPF*SKPLER Trigger: CCTCTCAAGTGGCTTGCTCCAGAAAGGCTTCTCCTG...AATTAGTTCCTTCAAGAACAGAGAGAAGGAACTTTCTGTGGCCCACCAAGGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR CCA 90 bp | TTTCTCCCTTGGTGGGCCACAGAAAGTTCCTTCTCTCTGTTCTTGAAGGAACTACAGGAGAAGCCTTTCTaGAGCAAGCCACTTGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: FLPWWATESSFSLFLKELQEKPF*SKPLER Trigger: CCTCTCAAGTGGCTTGCTCCAGAAAGGCTTCTCCTG...TAGTTCCTTCAAGAACAGAGAGAAGGAACTTTCTGTGGCCCACCAAGGGAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR TCA 90 bp | ACCACCTGGGTTACTAAGTCTTCTTGCTCGACTTTCATGCTTCCTATTTGTTATCTGGAGCAAGCCACTTaGGAGGGATGGTGCTGGATC | + |
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Preference number: 4 (lower is better) Translates to: TTWVTKSSCSTFMLPICYLEQAT*EGWCWI Trigger: GATCCAGCACCATCCCTCTCAAGTGGCTTGCTCCAG...ATAACAAATAGGAAGCATGAAAGTCGAGCAAGAAGACTTAGTAACCCAGGTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| CDS-3UTR TCA 90 bp | CTCCCTTGGTGGGCCACAGAAAGTTCCTTCTCTCTGTTCTTGAAGGAACTAATTAAATGCTTTCTGCCCTaGTGCCAGCCACATCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: LPWWATESSFSLFLKELIKCFLP*CQPHLH Trigger: ATGCAGATGTGGCTGGCATCAGGGCAGAAAGCATTT...AATTAGTTCCTTCAAGAACAGAGAGAAGGAACTTTCTGTGGCCCACCAAGGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR TCA 90 bp | CTGGAAAGCAAACTACAATTGATGGTGATTCTTAGCTCAAGAGTACATGGTATGCTGGAGCAAGCCACTTaGGAGGGATGGTGCTGGATC | + |
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Preference number: 4 (lower is better) Translates to: LESKLQLMVILSSRVHGMLEQAT*EGWCWI Trigger: GATCCAGCACCATCCCTCTCAAGTGGCTTGCTCCAG...CATACCATGTACTCTTGAGCTAAGAATCACCATCAATTGTAGTTTGCTTTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR TCA 90 bp | ATACTTCAGCCCTTGGGACTGGAAAGCAAACTACAATTGATGGTGATTCTTAGCGTTGTACATGGCATGTaGGCAGCTGCTGGGTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: ILQPLGLESKLQLMVILSVVHGM*AAAGSL Trigger: AAGAGACCCAGCAGCTGCTCACATGCCATGTACAAC...GCTAAGAATCACCATCAATTGTAGTTTGCTTTCCAGTCCCAAGGGCTGAAGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR GCA 90 bp | GTAGAGGTAGAGCTTCATCCAGCAGCATTTCAGATGTCTAGGAAAATGTTTAGGATCTCCCCTGATGCTTaGAGGTCTCAGGAGAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: VEVELHPAAFQMSRKMFRISPDA*RSQEKP Trigger: AGGCTTCTCCTGAGACCTGCAAGCATCAGGGGAGAT...CCTAAACATTTTCCTAGACATCTGAAATGCTGCTGGATGAAGCTCTACCTCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR GCA 90 bp | ATACTTCAGCCCTTGGGACTGGAAAGCAAACTACAATTGATGGTGATTCTTAGCGATGCCAGCCACATCTaGATACAGTTCAGGCACCAC | + |
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Preference number: 4 (lower is better) Translates to: ILQPLGLESKLQLMVILSDASHI*IQFRHH Trigger: GTGGTGCCTGAACTGTATGCAGATGTGGCTGGCATC...GCTAAGAATCACCATCAATTGTAGTTTGCTTTCCAGTCCCAAGGGCTGAAGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR CCA 90 bp | TTTCTCCCTTGGTGGGCCACAGAAAGTTCCTTCTCTCTGTTCTTGAAGGAACTACGTCCTATAAAATCCTaGACCTCCTGGAGTCCAACT | + |
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Preference number: 4 (lower is better) Translates to: FLPWWATESSFSLFLKELRPIKS*TSWSPT Trigger: AGTTGGACTCCAGGAGGTCCAGGATTTTATAGGACG...TAGTTCCTTCAAGAACAGAGAGAAGGAACTTTCTGTGGCCCACCAAGGGAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR CCA 90 bp | AGTTCCTTCTCTCTGTTCTTGAAGGAACTAATTCCACCCATATATAGTCATTTGGCTGAGCAGGTCCCCTaGGACCACATCCTCCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: SSFSLFLKELIPPIYSHLAEQVP*DHILQH Trigger: ATGCTGGAGGATGTGGTCCCAGGGGACCTGCTCAGC...CAAATGACTATATATGGGTGGAATTAGTTCCTTCAAGAACAGAGAGAAGGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR CCA 90 bp | ATACTTCAGCCCTTGGGACTGGAAAGCAAACTACAATTGATGGTGATTCTTAGCAGAGCAGGCCATCCATaGTCATCACATCCCTTCGAC | + |
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Preference number: 4 (lower is better) Translates to: ILQPLGLESKLQLMVILSRAGHP*SSHPFD Trigger: GTCGAAGGGATGTGATGACCATGGATGGCCTGCTCT...GCTAAGAATCACCATCAATTGTAGTTTGCTTTCCAGTCCCAAGGGCTGAAGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR TCA 90 bp | CTCTTAATGACCACCTGGGTTACTAAGTCTTCTTGCTCGACTTTCATGCTTCCTCACACAGCTTGTCACTaGGACTGCATTCCAACAACA | + |
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Preference number: 4 (lower is better) Translates to: LLMTTWVTKSSCSTFMLPHTACH*DCIPTT Trigger: TGTTGTTGGAATGCAGTCTCAGTGACAAGCTGTGTG...AGGAAGCATGAAAGTCGAGCAAGAAGACTTAGTAACCCAGGTGGTCATTAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| CDS-3UTR TCA 90 bp | GTAGAGGTAGAGCTTCATCCAGCAGCATTTCAGATGTCTAGGAAAATGTTTAGGACCAAATATCTCCCCTaGTGCTTGCAGGTCTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: VEVELHPAAFQMSRKMFRTKYLP*CLQVSG Trigger: TCCTGAGACCTGCAAGCATCAGGGGAGATATTTGGT...CCTAAACATTTTCCTAGACATCTGAAATGCTGCTGGATGAAGCTCTACCTCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR GCA 90 bp | CTTATACTTCAGCCCTTGGGACTGGAAAGCAAACTACAATTGATGGTGATTCTTATCTCCCCTGATGCTTaGAGGTCTCAGGAGAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: LILQPLGLESKLQLMVILISPDA*RSQEKP Trigger: AGGCTTCTCCTGAGACCTGCAAGCATCAGGGGAGAT...AAGAATCACCATCAATTGTAGTTTGCTTTCCAGTCCCAAGGGCTGAAGTATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR TCA 90 bp | ACAAATGGGATGAACAATGTTCCTAATCATGAAATGACTCCTCCTGCTTCTAATCAGAAAGCCCTCCACTaGGGTCTCCTTAAGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: TNGMNNVPNHEMTPPASNQKALH*GLLKRQ Trigger: CTGCCTCTTAAGGAGACCTCAGTGGAGGGCTTTCTG...ATTAGAAGCAGGAGGAGTCATTTCATGATTAGGAACATTGTTCATCCCATTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| CDS-3UTR TCA 90 bp | GTAGAGGTAGAGCTTCATCCAGCAGCATTTCAGATGTCTAGGAAAATGTTTAGGGCCAACAGCACTTCATaGTGTTGTACATGGCATGTG | + |
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Preference number: 4 (lower is better) Translates to: VEVELHPAAFQMSRKMFRANSTS*CCTWHV Trigger: CACATGCCATGTACAACATCATGAAGTGCTGTTGGC...CCTAAACATTTTCCTAGACATCTGAAATGCTGCTGGATGAAGCTCTACCTCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR GCA 90 bp | GTAGAGGTAGAGCTTCATCCAGCAGCATTTCAGATGTCTAGGAAAATGTTTAGGGAAGATATTGTAGGATaGTGGTGGGAGGGACTTCAG | + |
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Preference number: 4 (lower is better) Translates to: VEVELHPAAFQMSRKMFREDIVG*WWEGLQ Trigger: CTGAAGTCCCTCCCACCAGCATCCTACAATATCTTC...CCTAAACATTTTCCTAGACATCTGAAATGCTGCTGGATGAAGCTCTACCTCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR CCA 90 bp | CTCTTAATGACCACCTGGGTTACTAAGTCTTCTTGCTCGACTTTCATGCTTCCTCCAGATGACAAAGTTTaGGAGTCAGGTCACTTTGGA | + |
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Preference number: 4 (lower is better) Translates to: LLMTTWVTKSSCSTFMLPPDDKV*ESGHFG Trigger: TCCAAAGTGACCTGACTCCCAAACTTTGTCATCTGG...AGGAAGCATGAAAGTCGAGCAAGAAGACTTAGTAACCCAGGTGGTCATTAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| CDS-3UTR CCA 90 bp | ACTTATACTTCAGCCCTTGGGACTGGAAAGCAAACTACAATTGATGGTGATTCTATTGTAGGATGCTGGTaGGAGGGACTTCAGGGTATG | + |
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Preference number: 4 (lower is better) Translates to: TYTSALGTGKQTTIDGDSIVGCW*EGLQGM Trigger: CATACCCTGAAGTCCCTCCCACCAGCATCCTACAAT...AGAATCACCATCAATTGTAGTTTGCTTTCCAGTCCCAAGGGCTGAAGTATAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR TCA 90 bp | CTTATACTTCAGCCCTTGGGACTGGAAAGCAAACTACAATTGATGGTGATTCTTCACACAGCTTGTCACTaGGACTGCATTCCAACAACA | + |
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Preference number: 4 (lower is better) Translates to: LILQPLGLESKLQLMVILHTACH*DCIPTT Trigger: TGTTGTTGGAATGCAGTCTCAGTGACAAGCTGTGTG...AAGAATCACCATCAATTGTAGTTTGCTTTCCAGTCCCAAGGGCTGAAGTATAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR TCA 90 bp | ATACTTCAGCCCTTGGGACTGGAAAGCAAACTACAATTGATGGTGATTCTTAGCGGAGAGCCGGAACAATaGTTACTTCATACTGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: ILQPLGLESKLQLMVILSGEPEQ*LLHTAS Trigger: AGAAGCAGTATGAAGTAATCATTGTTCCGGCTCTCC...GCTAAGAATCACCATCAATTGTAGTTTGCTTTCCAGTCCCAAGGGCTGAAGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR TCA 90 bp | AGTTCCTTCTCTCTGTTCTTGAAGGAACTAATTCCACCCATATATAGTCATTTGGTTGTACATGGCATGTaGGCAGCTGCTGGGTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: SSFSLFLKELIPPIYSHLVVHGM*AAAGSL Trigger: AAGAGACCCAGCAGCTGCTCACATGCCATGTACAAC...CAAATGACTATATATGGGTGGAATTAGTTCCTTCAAGAACAGAGAGAAGGAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR TCA 90 bp | CAGATTTTAAAAACCTCCTTTAGAATGACACGGTCCACCACTTATACTTCAGCCGCCAACAGCACTTCATaGTGTTGTACATGGCATGTG | + |
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Preference number: 4 (lower is better) Translates to: QILKTSFRMTRSTTYTSAANSTS*CCTWHV Trigger: CACATGCCATGTACAACATCATGAAGTGCTGTTGGC...GGCTGAAGTATAAGTGGTGGACCGTGTCATTCTAAAGGAGGTTTTTAAAATCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| CDS-3UTR GCA 90 bp | AGTTCCTTCTCTCTGTTCTTGAAGGAACTAATTCCACCCATATATAGTCATTTGTTTTTCTCCATGTCCTaGTGCCTCCTGGCTTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: SSFSLFLKELIPPIYSHLFFSMS*CLLASA Trigger: GGCAGAAGCCAGGAGGCAGCAGGACATGGAGAAAAA...CAAATGACTATATATGGGTGGAATTAGTTCCTTCAAGAACAGAGAGAAGGAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| CDS-3UTR GCA 90 bp | ACTTATACTTCAGCCCTTGGGACTGGAAAGCAAACTACAATTGATGGTGATTCTATAGGAAATGCTTTCTaGCCTGATGCCAGCCACATC | + |
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Preference number: 4 (lower is better) Translates to: TYTSALGTGKQTTIDGDSIGNAF*PDASHI Trigger: GATGTGGCTGGCATCAGGGCAGAAAGCATTTCCTAT...AGAATCACCATCAATTGTAGTTTGCTTTCCAGTCCCAAGGGCTGAAGTATAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR CCA 90 bp | CTCGACTTTCATGCTTCCTATTTGTTATACACACACACACTTTTTATCCCTGGTATTGTAGGATGCTGGTaGGAGGGACTTCAGGGTATG | + |
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Preference number: 4 (lower is better) Translates to: LDFHASYLLYTHTLFIPGIVGCW*EGLQGM Trigger: CATACCCTGAAGTCCCTCCCACCAGCATCCTACAAT...ACCAGGGATAAAAAGTGTGTGTGTGTATAACAAATAGGAAGCATGAAAGTCGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| CDS-3UTR TCA 90 bp | CAGATTTTAAAAACCTCCTTTAGAATGACACGGTCCACCACTTATACTTCAGCCGGAGAGCCGGAACAATaGTTACTTCATACTGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: QILKTSFRMTRSTTYTSAGEPEQ*LLHTAS Trigger: AGAAGCAGTATGAAGTAATCATTGTTCCGGCTCTCC...GGCTGAAGTATAAGTGGTGGACCGTGTCATTCTAAAGGAGGTTTTTAAAATCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| CDS-3UTR TCA 90 bp | AGTTCCTTCTCTCTGTTCTTGAAGGAACTAATTCCACCCATATATAGTCATTTGACCAAATATCTCCCCTaGTGCTTGCAGGTCTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SSFSLFLKELIPPIYSHLTKYLP*CLQVSG Trigger: TCCTGAGACCTGCAAGCATCAGGGGAGATATTTGGT...CAAATGACTATATATGGGTGGAATTAGTTCCTTCAAGAACAGAGAGAAGGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR TCA 90 bp | AGTTCCTTCTCTCTGTTCTTGAAGGAACTAATTCCACCCATATATAGTCATTTGAAATGCTTTCTGCCCTaGTGCCAGCCACATCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: SSFSLFLKELIPPIYSHLKCFLP*CQPHLH Trigger: ATGCAGATGTGGCTGGCATCAGGGCAGAAAGCATTT...CAAATGACTATATATGGGTGGAATTAGTTCCTTCAAGAACAGAGAGAAGGAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| 3UTR CAA 72 bp | ATACTTCAGCCCTTGGGACTGGAAAGCAAACTACAATaGATGGTGATTCTTAGCTCAAGAGTACATGGTATG | + |
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Preference number: 4 (lower is better) Translates to: ILQPLGLESKLQ*MVILSSRVHGM Trigger: CATACCATGTACTCTTGAGCTAAGAATCACCATCAATTGTAGTTTGCTTTCCAGTCCCAAGGGCTGAAGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR GCA 90 bp | CTGGAAAGCAAACTACAATTGATGGTGATTCTTAGCTCAAGAGTACATGGTATGAAGCCACAGGATGATTaGAAGAAGGATGAGAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: LESKLQLMVILSSRVHGMKPQDD*KKDEKA Trigger: GGCTTTCTCATCCTTCTTGCAATCATCCTGTGGCTT...CATACCATGTACTCTTGAGCTAAGAATCACCATCAATTGTAGTTTGCTTTCCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR GCA 90 bp | AAGGATGCTCTTCTATCTATAGTCAAGGAAAGGCTCAGTATTGTTTCTTATAGAAACAGGTGCTTCTCCTaGAGGAATTCCAGGGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: KDALLSIVKERLSIVSYRNRCFS*RNSRAK Trigger: TTTGGCCCTGGAATTCCTGCAGGAGAAGCACCTGTT...TCTATAAGAAACAATACTGAGCCTTTCCTTGACTATAGATAGAAGAGCATCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| CDS-3UTR GCA 90 bp | AGTCTTCTTGCTCGACTTTCATGCTTCCTATTTGTTATACACACACACACTTTTATAGGAAATGCTTTCTaGCCTGATGCCAGCCACATC | + |
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Preference number: 4 (lower is better) Translates to: SLLARLSCFLFVIHTHTFIGNAF*PDASHI Trigger: GATGTGGCTGGCATCAGGGCAGAAAGCATTTCCTAT...AAAAGTGTGTGTGTGTATAACAAATAGGAAGCATGAAAGTCGAGCAAGAAGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| CDS-3UTR CCA 90 bp | AGTTCCTTCTCTCTGTTCTTGAAGGAACTAATTCCACCCATATATAGTCATTTGCGTCCTATAAAATCCTaGACCTCCTGGAGTCCAACT | + |
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Preference number: 4 (lower is better) Translates to: SSFSLFLKELIPPIYSHLRPIKS*TSWSPT Trigger: AGTTGGACTCCAGGAGGTCCAGGATTTTATAGGACG...CAAATGACTATATATGGGTGGAATTAGTTCCTTCAAGAACAGAGAGAAGGAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR GCA 90 bp | AGTTCCTTCTCTCTGTTCTTGAAGGAACTAATTCCACCCATATATAGTCATTTGAAGCCACAGGATGATTaGAAGAAGGATGAGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSFSLFLKELIPPIYSHLKPQDD*KKDEKA Trigger: GGCTTTCTCATCCTTCTTGCAATCATCCTGTGGCTT...CAAATGACTATATATGGGTGGAATTAGTTCCTTCAAGAACAGAGAGAAGGAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR GCA 90 bp | AAGGATGCTCTTCTATCTATAGTCAAGGAAAGGCTCAGTATTGTTTCTTATAGAGAAGATATTGTAGGATaGTGGTGGGAGGGACTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KDALLSIVKERLSIVSYREDIVG*WWEGLQ Trigger: CTGAAGTCCCTCCCACCAGCATCCTACAATATCTTC...TCTATAAGAAACAATACTGAGCCTTTCCTTGACTATAGATAGAAGAGCATCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| CDS-3UTR CCA 90 bp | AGTTCCTTCTCTCTGTTCTTGAAGGAACTAATTCCACCCATATATAGTCATTTGCCAGATGACAAAGTTTaGGAGTCAGGTCACTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSFSLFLKELIPPIYSHLPDDKV*ESGHFG Trigger: TCCAAAGTGACCTGACTCCCAAACTTTGTCATCTGG...CAAATGACTATATATGGGTGGAATTAGTTCCTTCAAGAACAGAGAGAAGGAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS GCA 90 bp | CTGTGGATTTGCTCCAGAACCTCCAAGAGCTGTTCCCTGGGCACCTaGAGCTTAGCCAGGCGGGGTGTGGCCGCTCGCAGAAAGCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LWICSRTSKSCSLGT*SLARRGVAARRKPS Trigger: GGAGGGCTTTCTGCGAGCGGCCACACCCCGCCTGGCTAAGCTGCAGGTGCCCAGGGAACAGCTCTTGGAGGTTCTGGAGCAAATCCACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| CDS TCA 90 bp | CAGCTTAGCCAGGCGGGGTGTGGCCGCTCGCAGAAAGCCCTCCACTaGGGTCTCCTTAAGAGGCAGAAGTACTTTTTCTCCATGTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QLSQAGCGRSQKALH*GLLKRQKYFFSMSC Trigger: GCAGGACATGGAGAAAAAGTACTTCTGCCTCTTAAGGAGACCTCAGTGGAGGGCTTTCTGCGAGCGGCCACACCCCGCCTGGCTAAGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| CDS CCA 90 bp | GCTGAGCAGGTCCCCTGGGACCACATCCTCCAGCATCATATAGAGTaGCAGCCTTTCTGTACAGCAGCCCTCCAGCTGTACCAGGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AEQVPWDHILQHHIE*QPFCTAALQLYQVL Trigger: AAGAACCTGGTACAGCTGGAGGGCTGCTGTACAGAAAGGCTGCCACTCTATATGATGCTGGAGGATGTGGTCCCAGGGGACCTGCTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS TCA 90 bp | GGCCATCCATGGTCATCACATCCCTTCGACAGGTCCAAAGAAAGCTaGGCAGGTCCCCTGGGACCACATCCTCCAGCATCATATAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GHPWSSHPFDRSKES*AGPLGPHPPASYRV Trigger: CACTCTATATGATGCTGGAGGATGTGGTCCCAGGGGACCTGCTCAGCTTTCTTTGGACCTGTCGAAGGGATGTGATGACCATGGATGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS GCA 90 bp | TCCTGGACCTCCTGGAGTCCAACTGGATCTCGGGGTCCAGGGCTCTaGCTTTGGGATCTCTGTCCTCTGATAAAAAGCCACAGGATGATT | + |
|
Preference number: 5 (lower is better) Translates to: SWTSWSPTGSRGPGL*LWDLCPLIKSHRMI Trigger: AATCATCCTGTGGCTTTTTATCAGAGGACAGAGATCCCAAAGGCAGAGCCCTGGACCCCGAGATCCAGTTGGACTCCAGGAGGTCCAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121078.2 |
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| CDS CCA 90 bp | CCAAATATCTCCCCTGATGCTTGCAGGTCTCAGGAGAAGCCTTTCTaGAGCAAGCCACTTGAGAGGGATGGTGCTGGATCGAGCAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PNISPDACRSQEKPF*SKPLERDGAGSSRG Trigger: TCCTCTGCTCGATCCAGCACCATCCCTCTCAAGTGGCTTGCTCCAGAAAGGCTTCTCCTGAGACCTGCAAGCATCAGGGGAGATATTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS CCA 90 bp | CATCACATCCCTTCGACAGGTCCAAAGAAAGCTGAGCAGGTCCCCTaGGACCACATCCTCCAGCATCATATAGAGTGGCAGCCTTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: HHIPSTGPKKAEQVP*DHILQHHIEWQPFC Trigger: ACAGAAAGGCTGCCACTCTATATGATGCTGGAGGATGTGGTCCCAGGGGACCTGCTCAGCTTTCTTTGGACCTGTCGAAGGGATGTGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS CCA 90 bp | GAATTGGATTCGTCCTATAAAATCCTGGACCTCCTGGAGTCCAACTaGATCTCGGGGTCCAGGGCTCTGCCTTTGGGATCTCTGTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ELDSSYKILDLLESN*ISGSRALPLGSLSS Trigger: AGAGGACAGAGATCCCAAAGGCAGAGCCCTGGACCCCGAGATCCAGTTGGACTCCAGGAGGTCCAGGATTTTATAGGACGAATCCAATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121078.2 |
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| CDS GCA 90 bp | AGAAAGCCGCCAACCAGGAGAGCCGGAACAATGATTACTTCATACTaGTTCTCTCGGACAACACACAGCTTGTCACTGAGACTGCATTCC | + |
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Preference number: 5 (lower is better) Translates to: RKPPTRRAGTMITSY*FSRTTHSLSLRLHS Trigger: GGAATGCAGTCTCAGTGACAAGCTGTGTGTTGTCCGAGAGAAGCAGTATGAAGTAATCATTGTTCCGGCTCTCCTGGTTGGCGGCTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS GCA 90 bp | CTGCCTTTGGGATCTCTGTCCTCTGATAAAAAGCCACAGGATGATTaGAAGAAGGATGAGAAAGCCGCCAACCAGGAGAGCCGGAACAAT | + |
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Preference number: 5 (lower is better) Translates to: LPLGSLSSDKKPQDD*KKDEKAANQESRNN Trigger: ATTGTTCCGGCTCTCCTGGTTGGCGGCTTTCTCATCCTTCTTGCAATCATCCTGTGGCTTTTTATCAGAGGACAGAGATCCCAAAGGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR CAA 90 bp | TTTCTCCCTTGGTGGGCCACAGAAAGTTCCTTCTCTCTGTTCTTGAAGGAACTACGGACAACACACAGCTaGTCACTGAGACTGCATTCC | + |
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Preference number: 5 (lower is better) Translates to: FLPWWATESSFSLFLKELRTTHS*SLRLHS Trigger: GGAATGCAGTCTCAGTGACAAGCTGTGTGTTGTCCG...TAGTTCCTTCAAGAACAGAGAGAAGGAACTTTCTGTGGCCCACCAAGGGAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR CAA 90 bp | CTTATACTTCAGCCCTTGGGACTGGAAAGCAAACTACAATTGATGGTGATTCTTTCTGGAGCAAGCCACTaGAGAGGGATGGTGCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LILQPLGLESKLQLMVILSGASH*RGMVLD Trigger: ATCCAGCACCATCCCTCTCAAGTGGCTTGCTCCAGA...AAGAATCACCATCAATTGTAGTTTGCTTTCCAGTCCCAAGGGCTGAAGTATAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR CAA 90 bp | CTTATACTTCAGCCCTTGGGACTGGAAAGCAAACTACAATTGATGGTGATTCTTCGGACAACACACAGCTaGTCACTGAGACTGCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: LILQPLGLESKLQLMVILRTTHS*SLRLHS Trigger: GGAATGCAGTCTCAGTGACAAGCTGTGTGTTGTCCG...AAGAATCACCATCAATTGTAGTTTGCTTTCCAGTCCCAAGGGCTGAAGTATAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR CAA 90 bp | CAGATTTTAAAAACCTCCTTTAGAATGACACGGTCCACCACTTATACTTCAGCCGATCCTTGGTGGTCATaGTTGCATGATAGAGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: QILKTSFRMTRSTTYTSADPWWS*LHDRGS Trigger: GGACCCTCTATCATGCAACAATGACCACCAAGGATC...GGCTGAAGTATAAGTGGTGGACCGTGTCATTCTAAAGGAGGTTTTTAAAATCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| CDS-3UTR CAA 90 bp | ACAAATGGGATGAACAATGTTCCTAATCATGAAATGACTCCTCCTGCTTCTAATTCTGGAGCAAGCCACTaGAGAGGGATGGTGCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TNGMNNVPNHEMTPPASNSGASH*RGMVLD Trigger: ATCCAGCACCATCCCTCTCAAGTGGCTTGCTCCAGA...ATTAGAAGCAGGAGGAGTCATTTCATGATTAGGAACATTGTTCATCCCATTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| CDS-3UTR CAA 90 bp | ATACTTCAGCCCTTGGGACTGGAAAGCAAACTACAATTGATGGTGATTCTTAGCCAGCACTTCATGATGTaGTACATGGCATGTGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ILQPLGLESKLQLMVILSQHFMM*YMACEQ Trigger: CTGCTCACATGCCATGTACAACATCATGAAGTGCTG...GCTAAGAATCACCATCAATTGTAGTTTGCTTTCCAGTCCCAAGGGCTGAAGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS-3UTR CAA 90 bp | ACTTATACTTCAGCCCTTGGGACTGGAAAGCAAACTACAATTGATGGTGATTCTCAGCACTTCATGATGTaGTACATGGCATGTGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TYTSALGTGKQTTIDGDSQHFMM*YMACEQ Trigger: CTGCTCACATGCCATGTACAACATCATGAAGTGCTG...AGAATCACCATCAATTGTAGTTTGCTTTCCAGTCCCAAGGGCTGAAGTATAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS TCA 72 bp | GGCGGCTGTCCTCACTCCAGCGCCAACAGCACTTCATaGTGTTGTACATGGCATGTGAGCAGCTGCTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GGCPHSSANSTS*CCTWHVSSCWV Trigger: GACCCAGCAGCTGCTCACATGCCATGTACAACATCATGAAGTGCTGTTGGCGCTGGAGTGAGGACAGCCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS GCA 72 bp | GCAGGTACAGAGGCAGTGCCTCGGGGTCCAGGGCTCTaGCTTTGGGATCTCTGTCCTCTGATAAAAAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: AGTEAVPRGPGL*LWDLCPLIKSH Trigger: GTGGCTTTTTATCAGAGGACAGAGATCCCAAAGGCAGAGCCCTGGACCCCGAGGCACTGCCTCTGTACCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| CDS CCA 72 bp | TCCCCTGATGCTTGCAGGTCTCAGGAGAAGCCTTTCTaGAGCAAGCCACTTGAGAGGGATGGTGCTGGATCG | + |
|
Preference number: 6 (lower is better) Translates to: SPDACRSQEKPF*SKPLERDGAGS Trigger: CGATCCAGCACCATCCCTCTCAAGTGGCTTGCTCCAGAAAGGCTTCTCCTGAGACCTGCAAGCATCAGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS GCA 72 bp | TCCTGGAGTCCAACTGGATCTCGGGGTCCAGGGCTCTaGCTTTGGGATCTCTGTCCTCTGATAAAAAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SWSPTGSRGPGL*LWDLCPLIKSH Trigger: GTGGCTTTTTATCAGAGGACAGAGATCCCAAAGGCAGAGCCCTGGACCCCGAGATCCAGTTGGACTCCAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121078.2 |
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| CDS CAA 72 bp | CAGGCCCAGATGACAAAGTTTGGGAGTCAGGTCACTTaGGATCAGGATGTTCCTGGCAGCCACATCCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: QAQMTKFGSQVT*DQDVPGSHIPM Trigger: CATGGGGATGTGGCTGCCAGGAACATCCTGATCCAAAGTGACCTGACTCCCAAACTTTGTCATCTGGGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS CAA 90 bp | GGTCATTGTTGCATGATAGAGGGTCCCACAACTACCACTGTGGATTaGCTCCAGAACCTCCAAGAGCTGTTCCCTGGGCACCTGCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: GHCCMIEGPTTTTVD*LQNLQELFPGHLQL Trigger: AAGCTGCAGGTGCCCAGGGAACAGCTCTTGGAGGTTCTGGAGCAAATCCACAGTGGTAGTTGTGGGACCCTCTATCATGCAACAATGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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| CDS GCA 72 bp | CAGGATCCCAAAGGACCAAATATCTCCCCTGATGCTTaGAGGTCTCAGGAGAAGCCTTTCTGGAGCAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: QDPKGPNISPDA*RSQEKPFWSKP Trigger: TGGCTTGCTCCAGAAAGGCTTCTCCTGAGACCTGCAAGCATCAGGGGAGATATTTGGTCCTTTGGGATCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS CAA 90 bp | TTCATAAGCCAGGCCCAGATGACAAAGTTTGGGAGTCAGGTCACTTaGGATCAGGATGTTCCTGGCAGCCACATCCCCATGAAACAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: FISQAQMTKFGSQVT*DQDVPGSHIPMKQV Trigger: CACCTGTTTCATGGGGATGTGGCTGCCAGGAACATCCTGATCCAAAGTGACCTGACTCCCAAACTTTGTCATCTGGGCCTGGCTTATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS GCA 72 bp | ATAGGAAATGCTTTCTGCCCTGATGCCAGCCACATCTaGATACAGTTCAGGCACCACCAACTCTGGCACTTG | + |
|
Preference number: 6 (lower is better) Translates to: IGNAFCPDASHI*IQFRHHQLWHL Trigger: CAAGTGCCAGAGTTGGTGGTGCCTGAACTGTATGCAGATGTGGCTGGCATCAGGGCAGAAAGCATTTCCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS CAA 72 bp | ATTACTTCATACTGCTTCTCTCGGACAACACACAGCTaGTCACTGAGACTGCATTCCAACAACACCCGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ITSYCFSRTTHS*SLRLHSNNTRL Trigger: GAGCCGGGTGTTGTTGGAATGCAGTCTCAGTGACAAGCTGTGTGTTGTCCGAGAGAAGCAGTATGAAGTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049150.8 ENSMUST00000121078.2 |
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| CDS GCA 72 bp | ACTTTTTGGCTTAGGGTGATCCTTGGTGGTCATTGTTaGATGATAGAGGGTCCCACAACTACCACTGTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: TFWLRVILGGHC*MIEGPTTTTVD Trigger: ATCCACAGTGGTAGTTGTGGGACCCTCTATCATGCAACAATGACCACCAAGGATCACCCTAAGCCAAAAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049150.8 |
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