Pregenerated sensors for STXBP6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046314Ensembl transcript IDs: ENSMUST00000053768.14, ENSMUST00000120531.8, ENSMUST00000139750.2, ENSMUST00000143376.8
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGATTTCTCTGCAAGAGGCTGGACAGCTGAGAAGGGGCAGCAATTaGTCTTATAGCCTGTGTGTTTGGTGGAAGACAAGCAGGAAGGAT | + |
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Preference number: 1 (lower is better) Translates to: GISLQEAGQLRRGSN*SYSLCVWWKTSRKD Trigger: ATCCTTCCTGCTTGTCTTCCACCAAACACACAGGCTATAAGAGCAATTGCTGCCCCTTCTCAGCTGTCCAGCCTCTTGCAGAGAAATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR TCA 90 bp | TTCCACATGTGTTATCAGGGATTTCTCTGCAAGAGGCTGGACAGCTaGGAAGGGGCAGCAATTGCTCTTATAGCCTGTGTGTTTGGTGGA | + |
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Preference number: 1 (lower is better) Translates to: FHMCYQGFLCKRLDS*EGAAIALIACVFGG Trigger: TCCACCAAACACACAGGCTATAAGAGCAATTGCTGCCCCTTCTCAGCTGTCCAGCCTCTTGCAGAGAAATCCCTGATAACACATGTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR CCA 90 bp | CAAAATCAACACCTTAAGTGTTCTAGCAAGCTCAACCAAATGACCTaGTCCCATACGCCAGGCGTCCTCTTAACAAATTCATGCTGGTTA | + |
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Preference number: 1 (lower is better) Translates to: QNQHLKCSSKLNQMT*SHTPGVLLTNSCWL Trigger: TAACCAGCATGAATTTGTTAAGAGGACGCCTGGCGTATGGGACCAGGTCATTTGGTTGAGCTTGCTAGAACACTTAAGGTGTTGATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR GCA 90 bp | TCCCATACGCCAGGCGTCCTCTTAACAAATTCATGCTGGTTACACTaGGTTAGCATTTTACATTTCAGTACCTTTTACCAAAGGATTGCA | + |
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Preference number: 1 (lower is better) Translates to: SHTPGVLLTNSCWLH*VSILHFSTFYQRIA Trigger: TGCAATCCTTTGGTAAAAGGTACTGAAATGTAAAATGCTAACGCAGTGTAACCAGCATGAATTTGTTAAGAGGACGCCTGGCGTATGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR CCA 90 bp | CACTTGTTTGCAGCAAATCCCATCCTCTTCCTGACATTATACCTATaGTATTCCACGGAAAAATGTGCTCTTTCTCAGGGGATGTGTTAT | + |
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Preference number: 1 (lower is better) Translates to: HLFAANPILFLTLYL*YSTEKCALSQGMCY Trigger: ATAACACATCCCCTGAGAAAGAGCACATTTTTCCGTGGAATACCATAGGTATAATGTCAGGAAGAGGATGGGATTTGCTGCAAACAAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR GCA 90 bp | GCAGCATTCTTTAGCAAGATAGGGAAATATATGCCCACAGCATGCTaGCATTCATTCATATTAACATCTGACCATGAAGAATCAAACCCT | + |
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Preference number: 1 (lower is better) Translates to: AAFFSKIGKYMPTAC*HSFILTSDHEESNP Trigger: AGGGTTTGATTCTTCATGGTCAGATGTTAATATGAATGAATGGCAGCATGCTGTGGGCATATATTTCCCTATCTTGCTAAAGAATGCTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR TCA 90 bp | CAGTTGGCCCAAAGTTGTCAGATAGCCAACAAGCAATTTTATTGTTaGCTTGTGTGGGGAAAGTTAGACTATTTCTCTCAACTATTTATA | + |
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Preference number: 1 (lower is better) Translates to: QLAQSCQIANKQFYC*LVWGKLDYFSQLFI Trigger: TATAAATAGTTGAGAGAAATAGTCTAACTTTCCCCACACAAGTCAACAATAAAATTGCTTGTTGGCTATCTGACAACTTTGGGCCAACTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGTTATCAGGGATTTCTCTGCAAGAGGCTGGACAGCTGAGAAGGGGCAGCAAGTGTGCTGGGAAATGTaGGTGGAGGTCAGAGGTCAA | + |
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Preference number: 2 (lower is better) Translates to: CVIRDFSARGWTAEKGQQVCWEM*VEVRGQ Trigger: TTGACCTCTGACCTCCACCCACATTTCCCAGCACAC...TTGCTGCCCCTTCTCAGCTGTCCAGCCTCTTGCAGAGAAATCCCTGATAACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR GCA 90 bp | CATGTGTTATCAGGGATTTCTCTGCAAGAGGCTGGACAGCTGAGAAGGGGCAGCCTTTCAGTGTGCTTCTaGCTGTTCAGGAACAGTTGG | + |
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Preference number: 2 (lower is better) Translates to: HVLSGISLQEAGQLRRGSLSVCF*LFRNSW Trigger: CCAACTGTTCCTGAACAGGCAGAAGCACACTGAAAG...GCTGCCCCTTCTCAGCTGTCCAGCCTCTTGCAGAGAAATCCCTGATAACACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGTTATCAGGGATTTCTCTGCAAGAGGCTGGACAGCTGAGAAGGGGCAGCAAACTCAGCTTTCAGTGTaGTTCTGCCTGTTCAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: CVIRDFSARGWTAEKGQQTQLSV*FCLFRN Trigger: GTTCCTGAACAGGCAGAAGCACACTGAAAGCTGAGT...TTGCTGCCCCTTCTCAGCTGTCCAGCCTCTTGCAGAGAAATCCCTGATAACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGTTATCAGGGATTTCTCTGCAAGAGGCTGGACAGCTGAGAAGGGGCAGCAAAGCCTGTGTGTTTGGTaGAAGACAAGCAGGAAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: CVIRDFSARGWTAEKGQQSLCVW*KTSRKD Trigger: ATCCTTCCTGCTTGTCTTCCACCAAACACACAGGCT...TTGCTGCCCCTTCTCAGCTGTCCAGCCTCTTGCAGAGAAATCCCTGATAACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR TCA 90 bp | CATGTGTTATCAGGGATTTCTCTGCAAGAGGCTGGACAGCTGAGAAGGGGCAGCAAAATCCAATTCCCCTaGTATGCCCATGTGTTTACC | + |
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Preference number: 2 (lower is better) Translates to: HVLSGISLQEAGQLRRGSKIQFP*YAHVFT Trigger: GGTAAACACATGGGCATATCAGGGGAATTGGATTTT...GCTGCCCCTTCTCAGCTGTCCAGCCTCTTGCAGAGAAATCCCTGATAACACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR CCA 90 bp | CATGTGTTATCAGGGATTTCTCTGCAAGAGGCTGGACAGCTGAGAAGGGGCAGCGGCGAAAGCATTATGTaGCTTTTATTTGTACCCAGG | + |
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Preference number: 2 (lower is better) Translates to: HVLSGISLQEAGQLRRGSGESIM*LLFVPR Trigger: CCTGGGTACAAATAAAAGCCACATAATGCTTTCGCC...GCTGCCCCTTCTCAGCTGTCCAGCCTCTTGCAGAGAAATCCCTGATAACACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR CCA 90 bp | GACCACTACAGCTACATTCCAGGAAGAAGTGGAAATGCTGGCAAGTTCCTTTTTTTCTCTGCAAGAGGCTaGACAGCTGAGAAGGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: DHYSYIPGRSGNAGKFLFFSARG*TAEKGQ Trigger: CTGCCCCTTCTCAGCTGTCCAGCCTCTTGCAGAGAA...AAAAAGGAACTTGCCAGCATTTCCACTTCTTCCTGGAATGTAGCTGTAGTGGTC 49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR GCA 90 bp | CATGTGTTATCAGGGATTTCTCTGCAAGAGGCTGGACAGCTGAGAAGGGGCAGCTGTAGCTTGCCTCATTaGTTTATGAGGAACAAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: HVLSGISLQEAGQLRRGSCSLPH*FMRNKH Trigger: ATGCTTGTTCCTCATAAAGCAATGAGGCAAGCTACA...GCTGCCCCTTCTCAGCTGTCCAGCCTCTTGCAGAGAAATCCCTGATAACACATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR TCA 90 bp | CATGTGTTATCAGGGATTTCTCTGCAAGAGGCTGGACAGCTGAGAAGGGGCAGCCTGATGCCACCATATTaGACTATTTTGTTGCTTAGT | + |
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Preference number: 2 (lower is better) Translates to: HVLSGISLQEAGQLRRGSLMPPY*TILLLS Trigger: ACTAAGCAACAAAATAGTTCAATATGGTGGCATCAG...GCTGCCCCTTCTCAGCTGTCCAGCCTCTTGCAGAGAAATCCCTGATAACACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR TCA 90 bp | CAATGGATTTCACATGTGTTATTAAGGGTTTCACATGTGTCATCAGGGGTTCCAAAGAGGCTGGACAGCTaGGAAGGGGCAGCAATTGCT | + |
|
Preference number: 2 (lower is better) Translates to: QWISHVLLRVSHVSSGVPKRLDS*EGAAIA Trigger: AGCAATTGCTGCCCCTTCTCAGCTGTCCAGCCTCTT...TGGAACCCCTGATGACACATGTGAAACCCTTAATAACACATGTGAAATCCATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR CAA 90 bp | AGCTTTCAGTGTGCTTCTGCCTGTTCAGGAACAGTTGGCCCAAAGTaGTCAGATAGCCAACAAGCAATTTTATTGTTGACTTGTGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: SFQCASACSGTVGPK*SDSQQAILLLTCVG Trigger: CCCCACACAAGTCAACAATAAAATTGCTTGTTGGCTATCTGACAACTTTGGGCCAACTGTTCCTGAACAGGCAGAAGCACACTGAAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR GCA 90 bp | GCAATGGATTTCACATGTGTTATTAAGGGTTTCACATGTGTCATCAGGGGTTCCAAAGGCCTGTCATTGTaGTGCCTGTATCAGACCAGG | + |
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Preference number: 2 (lower is better) Translates to: AMDFTCVIKGFTCVIRGSKGLSL*CLYQTR Trigger: CCTGGTCTGATACAGGCAGCACAATGACAGGCCTTT...GGAACCCCTGATGACACATGTGAAACCCTTAATAACACATGTGAAATCCATTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGTTATCAGGGATTTCTCTGCAAGAGGCTGGACAGCTGAGAAGGGGCAGCAAAGTATGTTCTTCACCTaGATTATCTGCCTAAAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: CVIRDFSARGWTAEKGQQSMFFT*IICLKG Trigger: TCCTTTTAGGCAGATAATCCAGGTGAAGAACATACT...TTGCTGCCCCTTCTCAGCTGTCCAGCCTCTTGCAGAGAAATCCCTGATAACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR GCA 90 bp | CAATGGATTTCACATGTGTTATTAAGGGTTTCACATGTGTCATCAGGGGTTCCAACTCAGCTTTCAGTGTaGTTCTGCCTGTTCAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: QWISHVLLRVSHVSSGVPTQLSV*FCLFRN Trigger: GTTCCTGAACAGGCAGAAGCACACTGAAAGCTGAGT...TGGAACCCCTGATGACACATGTGAAACCCTTAATAACACATGTGAAATCCATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR TCA 90 bp | GCAATGGATTTCACATGTGTTATTAAGGGTTTCACATGTGTCATCAGGGGTTCCAAAATCCAATTCCCCTaGTATGCCCATGTGTTTACC | + |
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Preference number: 2 (lower is better) Translates to: AMDFTCVIKGFTCVIRGSKIQFP*YAHVFT Trigger: GGTAAACACATGGGCATATCAGGGGAATTGGATTTT...GGAACCCCTGATGACACATGTGAAACCCTTAATAACACATGTGAAATCCATTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR GCA 90 bp | GACCACTACAGCTACATTCCAGGAAGAAGTGGAAATGCTGGCAAGTTCCTTTTTATGCCCACAGCATGCTaGCATTCATTCATATTAACA | + |
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Preference number: 2 (lower is better) Translates to: DHYSYIPGRSGNAGKFLFMPTAC*HSFILT Trigger: TGTTAATATGAATGAATGGCAGCATGCTGTGGGCAT...AAAAAGGAACTTGCCAGCATTTCCACTTCTTCCTGGAATGTAGCTGTAGTGGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR CCA 90 bp | GTGCAGGGCATTTACATCTATATGCTAAGGAGGAAGACTCAGCTTTCAGTGTGCAGTATGTTCTTCACCTaGATTATCTGCCTAAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: VQGIYIYMLRRKTQLSVCSMFFT*IICLKG Trigger: TCCTTTTAGGCAGATAATCCAGGTGAAGAACATACT...GCACACTGAAAGCTGAGTCTTCCTCCTTAGCATATAGATGTAAATGCCCTGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR TCA 90 bp | GCAATGGATTTCACATGTGTTATTAAGGGTTTCACATGTGTCATCAGGGGTTCCATCCCATCCTCTTCCTaGCATTATACCTATGGTATT | + |
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Preference number: 2 (lower is better) Translates to: AMDFTCVIKGFTCVIRGSIPSSS*HYTYGI Trigger: AATACCATAGGTATAATGTCAGGAAGAGGATGGGAT...GGAACCCCTGATGACACATGTGAAACCCTTAATAACACATGTGAAATCCATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR TCA 90 bp | CAATGGATTTCACATGTGTTATTAAGGGTTTCACATGTGTCATCAGGGGTTCCAGTTTTAGGCCAAAACTaGTCAAGAGAGGGAATAGGA | + |
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Preference number: 2 (lower is better) Translates to: QWISHVLLRVSHVSSGVPVLGQN*SREGIG Trigger: TCCTATTCCCTCTCTTGATCAGTTTTGGCCTAAAAC...TGGAACCCCTGATGACACATGTGAAACCCTTAATAACACATGTGAAATCCATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR CCA 90 bp | CAATGGATTTCACATGTGTTATTAAGGGTTTCACATGTGTCATCAGGGGTTCCAGGCGAAAGCATTATGTaGCTTTTATTTGTACCCAGG | + |
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Preference number: 2 (lower is better) Translates to: QWISHVLLRVSHVSSGVPGESIM*LLFVPR Trigger: CCTGGGTACAAATAAAAGCCACATAATGCTTTCGCC...TGGAACCCCTGATGACACATGTGAAACCCTTAATAACACATGTGAAATCCATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR CCA 90 bp | GTGCAGGGCATTTACATCTATATGCTAAGGAGGAAGACTCAGCTTTCAGTGTGCCTGACATTATACCTATaGTATTCCACGGAAAAATGT | + |
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Preference number: 2 (lower is better) Translates to: VQGIYIYMLRRKTQLSVCLTLYL*YSTEKC Trigger: ACATTTTTCCGTGGAATACCATAGGTATAATGTCAG...GCACACTGAAAGCTGAGTCTTCCTCCTTAGCATATAGATGTAAATGCCCTGCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR TCA 90 bp | GCAATGGATTTCACATGTGTTATTAAGGGTTTCACATGTGTCATCAGGGGTTCCCTGATGCCACCATATTaGACTATTTTGTTGCTTAGT | + |
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Preference number: 2 (lower is better) Translates to: AMDFTCVIKGFTCVIRGSLMPPY*TILLLS Trigger: ACTAAGCAACAAAATAGTTCAATATGGTGGCATCAG...GGAACCCCTGATGACACATGTGAAACCCTTAATAACACATGTGAAATCCATTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR GCA 90 bp | GCAATGGATTTCACATGTGTTATTAAGGGTTTCACATGTGTCATCAGGGGTTCCGTCATCTTACGTTGCTaGATTATTAGAGACTACATC | + |
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Preference number: 2 (lower is better) Translates to: AMDFTCVIKGFTCVIRGSVILRC*IIRDYI Trigger: GATGTAGTCTCTAATAATGCAGCAACGTAAGATGAC...GGAACCCCTGATGACACATGTGAAACCCTTAATAACACATGTGAAATCCATTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR GCA 90 bp | GACCACTACAGCTACATTCCAGGAAGAAGTGGAAATGCTGGCAAGTTCCTTTTTATTATTACACTTGTTTaGAGCAAATCCCATCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: DHYSYIPGRSGNAGKFLFIITLV*SKSHPL Trigger: AAGAGGATGGGATTTGCTGCAAACAAGTGTAATAAT...AAAAAGGAACTTGCCAGCATTTCCACTTCTTCCTGGAATGTAGCTGTAGTGGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR GCA 90 bp | GACCACTACAGCTACATTCCAGGAAGAAGTGGAAATGCTGGCAAGTTCCTTTTTTTCACCTGGATTATCTaGCTAAAAGGATTATTACAC | + |
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Preference number: 2 (lower is better) Translates to: DHYSYIPGRSGNAGKFLFFTWII*LKGLLH Trigger: GTGTAATAATCCTTTTAGGCAGATAATCCAGGTGAA...AAAAAGGAACTTGCCAGCATTTCCACTTCTTCCTGGAATGTAGCTGTAGTGGTC 40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR GCA 90 bp | ATTCCCAAGGATCTTGTGAGAGAGCCTCTAAAATTAGGCTTAGCTTTGTCAAAAATGCCCACAGCATGCTaGCATTCATTCATATTAACA | + |
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Preference number: 2 (lower is better) Translates to: IPKDLVREPLKLGLALSKMPTAC*HSFILT Trigger: TGTTAATATGAATGAATGGCAGCATGCTGTGGGCAT...TTTTGACAAAGCTAAGCCTAATTTTAGAGGCTCTCTCACAAGATCCTTGGGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR CCA 90 bp | GCAATGGATTTCACATGTGTTATTAAGGGTTTCACATGTGTCATCAGGGGTTCCCTGACATTATACCTATaGTATTCCACGGAAAAATGT | + |
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Preference number: 2 (lower is better) Translates to: AMDFTCVIKGFTCVIRGSLTLYL*YSTEKC Trigger: ACATTTTTCCGTGGAATACCATAGGTATAATGTCAG...GGAACCCCTGATGACACATGTGAAACCCTTAATAACACATGTGAAATCCATTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR CCA 90 bp | CACATTAGCAGCATCACAATTCTGAAATTAGGAATGGAACCTATCTTAACTAGTCATTCCAGGAAGAAGTaGAAATGCTGGCAAGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: HISSITILKLGMEPILTSHSRKK*KCWQVP Trigger: AGGAACTTGCCAGCATTTCCACTTCTTCCTGGAATG...ACTAGTTAAGATAGGTTCCATTCCTAATTTCAGAATTGTGATGCTGCTAATGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR TCA 90 bp | CACATTAGCAGCATCACAATTCTGAAATTAGGAATGGAACCTATCTTAACTAGTGTTTTAGGCCAAAACTaGTCAAGAGAGGGAATAGGA | + |
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Preference number: 2 (lower is better) Translates to: HISSITILKLGMEPILTSVLGQN*SREGIG Trigger: TCCTATTCCCTCTCTTGATCAGTTTTGGCCTAAAAC...ACTAGTTAAGATAGGTTCCATTCCTAATTTCAGAATTGTGATGCTGCTAATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR GCA 90 bp | CAATGGATTTCACATGTGTTATTAAGGGTTTCACATGTGTCATCAGGGGTTCCATTCACCTGGATTATCTaGCTAAAAGGATTATTACAC | + |
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Preference number: 2 (lower is better) Translates to: QWISHVLLRVSHVSSGVPFTWII*LKGLLH Trigger: GTGTAATAATCCTTTTAGGCAGATAATCCAGGTGAA...TGGAACCCCTGATGACACATGTGAAACCCTTAATAACACATGTGAAATCCATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR GCA 90 bp | CACATTAGCAGCATCACAATTCTGAAATTAGGAATGGAACCTATCTTAACTAGTTGTAGCTTGCCTCATTaGTTTATGAGGAACAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: HISSITILKLGMEPILTSCSLPH*FMRNKH Trigger: ATGCTTGTTCCTCATAAAGCAATGAGGCAAGCTACA...ACTAGTTAAGATAGGTTCCATTCCTAATTTCAGAATTGTGATGCTGCTAATGTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR CAA 90 bp | TACACTGCGTTAGCATTTTACATTTCAGTACCTTTTACCAAAGGATaGCAATGGATTTCACATGTGTTATTAAGGGTTTCACATGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: YTALAFYISVPFTKG*QWISHVLLRVSHVS Trigger: TGACACATGTGAAACCCTTAATAACACATGTGAAATCCATTGCAATCCTTTGGTAAAAGGTACTGAAATGTAAAATGCTAACGCAGTGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR GCA 90 bp | CACATTAGCAGCATCACAATTCTGAAATTAGGAATGGAACCTATCTTAACTAGTGTCATCTTACGTTGCTaGATTATTAGAGACTACATC | + |
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Preference number: 2 (lower is better) Translates to: HISSITILKLGMEPILTSVILRC*IIRDYI Trigger: GATGTAGTCTCTAATAATGCAGCAACGTAAGATGAC...ACTAGTTAAGATAGGTTCCATTCCTAATTTCAGAATTGTGATGCTGCTAATGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR CCA 90 bp | CACATTAGCAGCATCACAATTCTGAAATTAGGAATGGAACCTATCTTAACTAGTATTTGCAAAGTCCTTTaGAGAAAGACAGCATTTCCA | + |
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Preference number: 2 (lower is better) Translates to: HISSITILKLGMEPILTSICKVL*RKTAFP Trigger: TGGAAATGCTGTCTTTCTCCAAAGGACTTTGCAAAT...ACTAGTTAAGATAGGTTCCATTCCTAATTTCAGAATTGTGATGCTGCTAATGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR GCA 72 bp | AGAGGGTCCTGGCGACCCAGGCGTCTGAAAACTCCATaGACTGCAGTATGTGGCATGTGTAGCTTGCCTCAT | + |
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Preference number: 3 (lower is better) Translates to: RGSWRPRRLKTP*TAVCGMCSLPH Trigger: ATGAGGCAAGCTACACATGCCACATACTGCAGTGCATGGAGTTTTCAGACGCCTGGGTCGCCAGGACCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR-3UTR CAA 90 bp | CATGTGTTATCAGGGATTTCTCTGCAAGAGGCTGGACAGCTGAGAAGGGGCAGCGAAGCTAACAGGGCTTaGGGGGTGAGAAGAGGGTTC | + |
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Preference number: 3 (lower is better) Translates to: HVLSGISLQEAGQLRRGSEANRA*GVRRGF Trigger: GAACCCTCTTCTCACCCCCAAAGCCCTGTTAGCTTC...GCTGCCCCTTCTCAGCTGTCCAGCCTCTTGCAGAGAAATCCCTGATAACACATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| 3UTR TCA 72 bp | AGCAAAGAAGGAGAGGGTCCTGGCGACCCAGGCGTCTaGAAACTCCATGCACTGCAGTATGTGGCATGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: SKEGEGPGDPGV*KLHALQYVACV Trigger: TACACATGCCACATACTGCAGTGCATGGAGTTTTCAGACGCCTGGGTCGCCAGGACCCTCTCCTTCTTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| 3UTR GCA 72 bp | CTGCAAGAGGCTGGACAGCTGAGAAGGGGCAGCAATTaGTCTTATAGCCTGTGTGTTTGGTGGAAGACAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LQEAGQLRRGSN*SYSLCVWWKTS Trigger: GCTTGTCTTCCACCAAACACACAGGCTATAAGAGCAATTGCTGCCCCTTCTCAGCTGTCCAGCCTCTTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| 3UTR CCA 72 bp | GTTGGTGCTTTTGGAGCAGAGAGTCTTTCTTGCGTGTaGTCTCAGCCCTGTGTTCTCTCGCTGTTCCACTTC | + |
|
Preference number: 3 (lower is better) Translates to: VGAFGAESLSCV*SQPCVLSLFHF Trigger: GAAGTGGAACAGCGAGAGAACACAGGGCTGAGACCACACGCAAGAAAGACTCTCTGCTCCAAAAGCACCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139750.2 |
||
| 3UTR TCA 72 bp | TGTTATCAGGGATTTCTCTGCAAGAGGCTGGACAGCTaGGAAGGGGCAGCAATTGCTCTTATAGCCTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: CYQGFLCKRLDS*EGAAIALIACV Trigger: CACACAGGCTATAAGAGCAATTGCTGCCCCTTCTCAGCTGTCCAGCCTCTTGCAGAGAAATCCCTGATAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGTGTTATCAGGGATTTCTCTGCAAGAGGCTGGACAGCTGAGAAGGGGCAGCTTATGTGGCTTTTATTaGTACCCAGGACCATCACCT | + |
|
Preference number: 3 (lower is better) Translates to: HVLSGISLQEAGQLRRGSLCGFY*YPGPSP Trigger: AGGTGATGGTCCTGGGTACAAATAAAAGCCACATAA...GCTGCCCCTTCTCAGCTGTCCAGCCTCTTGCAGAGAAATCCCTGATAACACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| 3UTR TCA 72 bp | GCTGCATTATTAGAGACTACATCACAAGTAAACAGGTaGCTCGGTGGAGAGCAAAGAAGGAGAGGGTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: AALLETTSQVNR*LGGEQRRRGSW Trigger: CCAGGACCCTCTCCTTCTTTGCTCTCCACCGAGTCACCTGTTTACTTGTGATGTAGTCTCTAATAATGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| 3UTR CCA 72 bp | TTATATGGTGTACATATGTGTGCTGGGAAATGTGGGTaGAGGTCAGAGGTCAAATCTGTGGGGTCTAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LYGVHMCAGKCG*RSEVKSVGSSG Trigger: GCCACTAGACCCCACAGATTTGACCTCTGACCTCCACCCACATTTCCCAGCACACATATGTACACCATATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTTATCAGGGATTTCTCTGCAAGAGGCTGGACAGCTGAGAAGGGGCAGCAATTATGTGGCTTTTATTaGTACCCAGGACCATCACCT | + |
|
Preference number: 3 (lower is better) Translates to: CVIRDFSARGWTAEKGQQLCGFY*YPGPSP Trigger: AGGTGATGGTCCTGGGTACAAATAAAAGCCACATAA...TTGCTGCCCCTTCTCAGCTGTCCAGCCTCTTGCAGAGAAATCCCTGATAACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGTGTTATCAGGGATTTCTCTGCAAGAGGCTGGACAGCTGAGAAGGGGCAGCAAAGGATTATTACACTaGTTTGCAGCAAATCCCATC | + |
|
Preference number: 3 (lower is better) Translates to: HVLSGISLQEAGQLRRGSKGLLH*FAANPI Trigger: GATGGGATTTGCTGCAAACAAGTGTAATAATCCTTT...GCTGCCCCTTCTCAGCTGTCCAGCCTCTTGCAGAGAAATCCCTGATAACACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGTGTTATCAGGGATTTCTCTGCAAGAGGCTGGACAGCTGAGAAGGGGCAGCCAAGCAATTTTATTGTaGACTTGTGTGGGGAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: HVLSGISLQEAGQLRRGSQAILL*TCVGKV Trigger: AACTTTCCCCACACAAGTCAACAATAAAATTGCTTG...GCTGCCCCTTCTCAGCTGTCCAGCCTCTTGCAGAGAAATCCCTGATAACACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| 3UTR GCA 72 bp | ATCTATATGCTAAGGAGGAAGACTCAGCTTTCAGTGTaGTTCTGCCTGTTCAGGAACAGTTGGCCCAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: IYMLRRKTQLSV*FCLFRNSWPKV Trigger: AACTTTGGGCCAACTGTTCCTGAACAGGCAGAAGCACACTGAAAGCTGAGTCTTCCTCCTTAGCATATAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| 3UTR-3UTR CAA 90 bp | CAATGGATTTCACATGTGTTATTAAGGGTTTCACATGTGTCATCAGGGGTTCCATGTAAAGGCCTGTCATaGTGCTGCCTGTATCAGACC | + |
|
Preference number: 3 (lower is better) Translates to: QWISHVLLRVSHVSSGVPCKGLS*CCLYQT Trigger: GGTCTGATACAGGCAGCACAATGACAGGCCTTTACA...TGGAACCCCTGATGACACATGTGAAACCCTTAATAACACATGTGAAATCCATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAATGGATTTCACATGTGTTATTAAGGGTTTCACATGTGTCATCAGGGGTTCCGCCAATGAAACCAATTaGGGGTATTATTTGGGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: AMDFTCVIKGFTCVIRGSANETN*GYYLGA Trigger: GGCCCCCAAATAATACCCCAAATTGGTTTCATTGGC...GGAACCCCTGATGACACATGTGAAACCCTTAATAACACATGTGAAATCCATTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGCAGGGCATTTACATCTATATGCTAAGGAGGAAGACTCAGCTTTCAGTGTGCAAAGGATTATTACACTaGTTTGCAGCAAATCCCATC | + |
|
Preference number: 3 (lower is better) Translates to: VQGIYIYMLRRKTQLSVCKGLLH*FAANPI Trigger: GATGGGATTTGCTGCAAACAAGTGTAATAATCCTTT...GCACACTGAAAGCTGAGTCTTCCTCCTTAGCATATAGATGTAAATGCCCTGCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| 3UTR-3UTR CAA 90 bp | CACACACACACACACATACACACACACACACACACACAGACAATGGAAAAAGTAATGAAGCTGACACTATaGCAGCATTCTTTAGCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: HTHTHIHTHTHTQTMEKVMKLTL*QHSLAR Trigger: TCTTGCTAAAGAATGCTGCAATAGTGTCAGCTTCAT...TACTTTTTCCATTGTCTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAATGGATTTCACATGTGTTATTAAGGGTTTCACATGTGTCATCAGGGGTTCCATGAAGCTGACACTATaGCAGCATTCTTTAGCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: AMDFTCVIKGFTCVIRGSMKLTL*QHSLAR Trigger: TCTTGCTAAAGAATGCTGCAATAGTGTCAGCTTCAT...GGAACCCCTGATGACACATGTGAAACCCTTAATAACACATGTGAAATCCATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| 3UTR-3UTR CAA 90 bp | CAATGGATTTCACATGTGTTATTAAGGGTTTCACATGTGTCATCAGGGGTTCCACAACAAGCAATTTTATaGTTGACTTGTGTGGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: QWISHVLLRVSHVSSGVPQQAIL*LTCVGK Trigger: TTTCCCCACACAAGTCAACAATAAAATTGCTTGTTG...TGGAACCCCTGATGACACATGTGAAACCCTTAATAACACATGTGAAATCCATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| 3UTR TCA 72 bp | TATTACACTTGTTTGCAGCAAATCCCATCCTCTTCCTaGCATTATACCTATGGTATTCCACGGAAAAATGTG | + |
|
Preference number: 3 (lower is better) Translates to: YYTCLQQIPSSS*HYTYGIPRKNV Trigger: CACATTTTTCCGTGGAATACCATAGGTATAATGTCAGGAAGAGGATGGGATTTGCTGCAAACAAGTGTAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| 3UTR GCA 72 bp | CTGGATTATCTGCCTAAAAGGATTATTACACTTGTTTaGAGCAAATCCCATCCTCTTCCTGACATTATACCT | + |
|
Preference number: 3 (lower is better) Translates to: LDYLPKRIITLV*SKSHPLPDIIP Trigger: AGGTATAATGTCAGGAAGAGGATGGGATTTGCTGCAAACAAGTGTAATAATCCTTTTAGGCAGATAATCCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| 3UTR GCA 72 bp | TTTAGCAAGATAGGGAAATATATGCCCACAGCATGCTaGCATTCATTCATATTAACATCTGACCATGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: FSKIGKYMPTAC*HSFILTSDHEE Trigger: TTCTTCATGGTCAGATGTTAATATGAATGAATGGCAGCATGCTGTGGGCATATATTTCCCTATCTTGCTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| 3UTR GCA 72 bp | TTCTTTAGCAAGATAGGGAAATATATGCCCACAGCATaGTGCCATTCATTCATATTAACATCTGACCATGAA | + |
|
Preference number: 3 (lower is better) Translates to: FFSKIGKYMPTA*CHSFILTSDHE Trigger: TTCATGGTCAGATGTTAATATGAATGAATGGCAGCATGCTGTGGGCATATATTTCCCTATCTTGCTAAAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| 3UTR-3UTR CAA 90 bp | CACATTAGCAGCATCACAATTCTGAAATTAGGAATGGAACCTATCTTAACTAGTCAAGCAATTTTATTGTaGACTTGTGTGGGGAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: HISSITILKLGMEPILTSQAILL*TCVGKV Trigger: AACTTTCCCCACACAAGTCAACAATAAAATTGCTTG...ACTAGTTAAGATAGGTTCCATTCCTAATTTCAGAATTGTGATGCTGCTAATGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| 3UTR TCA 72 bp | CAAAGTTGTCAGATAGCCAACAAGCAATTTTATTGTTaGCTTGTGTGGGGAAAGTTAGACTATTTCTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: QSCQIANKQFYC*LVWGKLDYFSQ Trigger: TTGAGAGAAATAGTCTAACTTTCCCCACACAAGTCAACAATAAAATTGCTTGTTGGCTATCTGACAACTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CCA 90 bp | CATGTGTTATCAGGGATTTCTCTGCAAGAGGCTGGACAGCTGAGAAGGGGCAGCCGCTCGTTCAAGGCCTaGCTTGCCTTCTGTACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HVLSGISLQEAGQLRRGSRSFKA*LAFCTA Trigger: TGCAGTACAGAAGGCAAGCCAGGCCTTGAACGAGCG...GCTGCCCCTTCTCAGCTGTCCAGCCTCTTGCAGAGAAATCCCTGATAACACATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGGCGTCTGAAAACTCCATGCACTGCAGTATGTGGCATGTGTAGCTTGCCTCTATCAGCTGCTGAATaGAGGATGCTGTTTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PRRLKTPCTAVCGMCSLPLSAAE*RMLFPP Trigger: GGGAGGAAACAGCATCCTCCATTCAGCAGCTGATAG...AGGCAAGCTACACATGCCACATACTGCAGTGCATGGAGTTTTCAGACGCCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CCA 90 bp | CATGTGTTATCAGGGATTTCTCTGCAAGAGGCTGGACAGCTGAGAAGGGGCAGCCTATCAGCTGCTGAATaGAGGATGCTGTTTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HVLSGISLQEAGQLRRGSLSAAE*RMLFPP Trigger: GGGAGGAAACAGCATCCTCCATTCAGCAGCTGATAG...GCTGCCCCTTCTCAGCTGTCCAGCCTCTTGCAGAGAAATCCCTGATAACACATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR TCA 90 bp | TGTGTTATCAGGGATTTCTCTGCAAGAGGCTGGACAGCTGAGAAGGGGCAGCAACACACTATCAGCTGCTaGATGGAGGATGCTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CVIRDFSARGWTAEKGQQHTISC*MEDAVS Trigger: GGAAACAGCATCCTCCATTCAGCAGCTGATAGTGTG...TTGCTGCCCCTTCTCAGCTGTCCAGCCTCTTGCAGAGAAATCCCTGATAACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTTATCAGGGATTTCTCTGCAAGAGGCTGGACAGCTGAGAAGGGGCAGCAAGCTTGCCTTCTGTACTaGACTGGTCACACTATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CVIRDFSARGWTAEKGQQACLLY*TGHTIS Trigger: GCTGATAGTGTGACCAGTGCAGTACAGAAGGCAAGC...TTGCTGCCCCTTCTCAGCTGTCCAGCCTCTTGCAGAGAAATCCCTGATAACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAAGCAGCCCCGTCTGGACGTCTTGTAATAACTGCTGAACAAACTCCTCCATCTGTGAGGTACCTCTaGCAGGTGTGGTGGAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: KEAAPSGRLVITAEQTPPSVRYL*QVWWRI Trigger: GATCCTCCACCACACCTGCCAGAGGTACCTCACAGA...TGGAGGAGTTTGTTCAGCAGTTATTACAAGACGTCCAGACGGGGCTGCTTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR TCA 90 bp | CTAAGTTGGTGCTTTTGGAGCAGAGAGTCTTTCTTGCGTGTGGTCTCAGCCCTGGTTAAGTATTCGCCTTaGCCCCCAGTTGCCAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSWCFWSRESFLRVVSALVKYSP*PPVAKK Trigger: TTTCTTGGCAACTGGGGGTCAAGGCGAATACTTAAC...CAGGGCTGAGACCACACGCAAGAAAGACTCTCTGCTCCAAAAGCACCAACTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139750.2 |
||
| CDS-3UTR TCA 90 bp | GACCACTACAGCTACATTCCAGGAAGAAGTGGAAATGCTGGCAAGTTCCTTTTTCTGGCTTCCTGTCTGTaGGGTACCTCTGGCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DHYSYIPGRSGNAGKFLFLASCL*GTSGRC Trigger: ACACCTGCCAGAGGTACCTCACAGACAGGAAGCCAG...AAAAAGGAACTTGCCAGCATTTCCACTTCTTCCTGGAATGTAGCTGTAGTGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTTATCAGGGATTTCTCTGCAAGAGGCTGGACAGCTGAGAAGGGGCAGCAAGTGTGGTGGAGGATCTaGAAGAAGGTGCACTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CVIRDFSARGWTAEKGQQVWWRI*KKVHFS Trigger: AGAAAAGTGCACCTTCTTCCAGATCCTCCACCACAC...TTGCTGCCCCTTCTCAGCTGTCCAGCCTCTTGCAGAGAAATCCCTGATAACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| 3UTR CAA 72 bp | TGTCTAAGTTGGTGCTTTTGGAGCAGAGAGTCTTTCTaGCGTGTGGTCTCAGCCCTGTGTTCTCTCGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CLSWCFWSRESF*RVVSALCSLAV Trigger: AACAGCGAGAGAACACAGGGCTGAGACCACACGCAAGAAAGACTCTCTGCTCCAAAAGCACCAACTTAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139750.2 |
||
| CDS-3UTR CCA 90 bp | CATGTGTTATCAGGGATTTCTCTGCAAGAGGCTGGACAGCTGAGAAGGGGCAGCTCAATACCATTAACTTaGCGAAGCTGCTCAAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: HVLSGISLQEAGQLRRGSSIPLT*RSCSSI Trigger: GATGCTTGAGCAGCTTCGCCAAGTTAATGGTATTGA...GCTGCCCCTTCTCAGCTGTCCAGCCTCTTGCAGAGAAATCCCTGATAACACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR GCA 90 bp | GACCACTACAGCTACATTCCAGGAAGAAGTGGAAATGCTGGCAAGTTCCTTTTTGTTCAAGGCCTGGCTTaGCTTCTGTACTGCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DHYSYIPGRSGNAGKFLFVQGLA*LLYCTG Trigger: ACCAGTGCAGTACAGAAGGCAAGCCAGGCCTTGAAC...AAAAAGGAACTTGCCAGCATTTCCACTTCTTCCTGGAATGTAGCTGTAGTGGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACATACACACACACACACACACACAGACAATGGAAAAAGTACTCTGGCAGGTGTGGTaGAGGATCTGGAAGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHIHTHTHTQTMEKVLWQVW*RIWKKV Trigger: CACCTTCTTCCAGATCCTCCACCACACCTGCCAGAG...TACTTTTTCCATTGTCTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR GCA 90 bp | GACCACTACAGCTACATTCCAGGAAGAAGTGGAAATGCTGGCAAGTTCCTTTTTGCTTGCCTTCTGTACTaGACTGGTCACACTATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DHYSYIPGRSGNAGKFLFACLLY*TGHTIS Trigger: GCTGATAGTGTGACCAGTGCAGTACAGAAGGCAAGC...AAAAAGGAACTTGCCAGCATTTCCACTTCTTCCTGGAATGTAGCTGTAGTGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR GCA 90 bp | CACACACACACACACATACACACACACACACACACACAGACAATGGAAAAAGTAGTTCAAGGCCTGGCTTaGCTTCTGTACTGCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHIHTHTHTQTMEKVVQGLA*LLYCTG Trigger: ACCAGTGCAGTACAGAAGGCAAGCCAGGCCTTGAAC...TACTTTTTCCATTGTCTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAAGCAGCCCCGTCTGGACGTCTTGTAATAACTGCTGAACAAACTCCTCCATGCTCAAGCATCCATTaGGATCTTCGGACGAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: KEAAPSGRLVITAEQTPPCSSIH*DLRTND Trigger: ATCATTCGTCCGAAGATCCCAATGGATGCTTGAGCA...TGGAGGAGTTTGTTCAGCAGTTATTACAAGACGTCCAGACGGGGCTGCTTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR GCA 90 bp | GCAATGGATTTCACATGTGTTATTAAGGGTTTCACATGTGTCATCAGGGGTTCCCTTGTGTGCGGTTTCTaGAAACTGCTGGGCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AMDFTCVIKGFTCVIRGSLVCGF*KLLGTV Trigger: AACAGTGCCCAGCAGTTTGCAGAAACCGCACACAAG...GGAACCCCTGATGACACATGTGAAACCCTTAATAACACATGTGAAATCCATTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CCA 90 bp | GTGCAGGGCATTTACATCTATATGCTAAGGAGGAAGACTCAGCTTTCAGTGTGCTGCTCAAGCATCCATTaGGATCTTCGGACGAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: VQGIYIYMLRRKTQLSVCCSSIH*DLRTND Trigger: ATCATTCGTCCGAAGATCCCAATGGATGCTTGAGCA...GCACACTGAAAGCTGAGTCTTCCTCCTTAGCATATAGATGTAAATGCCCTGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CCA 90 bp | ATTCCCAAGGATCTTGTGAGAGAGCCTCTAAAATTAGGCTTAGCTTTGTCAAAACGCTCGTTCAAGGCCTaGCTTGCCTTCTGTACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IPKDLVREPLKLGLALSKRSFKA*LAFCTA Trigger: TGCAGTACAGAAGGCAAGCCAGGCCTTGAACGAGCG...TTTTGACAAAGCTAAGCCTAATTTTAGAGGCTCTCTCACAAGATCCTTGGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| 3UTR CAA 72 bp | TCAGCTTTCAGTGTGCTTCTGCCTGTTCAGGAACAGTaGGCCCAAAGTTGTCAGATAGCCAACAAGCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: SAFSVLLPVQEQ*AQSCQIANKQF Trigger: AAATTGCTTGTTGGCTATCTGACAACTTTGGGCCAACTGTTCCTGAACAGGCAGAAGCACACTGAAAGCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR TCA 90 bp | CACATTAGCAGCATCACAATTCTGAAATTAGGAATGGAACCTATCTTAACTAGTCTGGCTTCCTGTCTGTaGGGTACCTCTGGCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HISSITILKLGMEPILTSLASCL*GTSGRC Trigger: ACACCTGCCAGAGGTACCTCACAGACAGGAAGCCAG...ACTAGTTAAGATAGGTTCCATTCCTAATTTCAGAATTGTGATGCTGCTAATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| 3UTR CAA 72 bp | ATCAATGCCTTAGCAGACACTAACTGGATGTCTAAGTaGGTGCTTTTGGAGCAGAGAGTCTTTCTTGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: INALADTNWMSK*VLLEQRVFLAC Trigger: ACACGCAAGAAAGACTCTCTGCTCCAAAAGCACCAACTTAGACATCCAGTTAGTGTCTGCTAAGGCATTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139750.2 |
||
| CDS-3UTR TCA 90 bp | CAATGGATTTCACATGTGTTATTAAGGGTTTCACATGTGTCATCAGGGGTTCCAGTTAAGTATTCGCCTTaGCCCCCAGTTGCCAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QWISHVLLRVSHVSSGVPVKYSP*PPVAKK Trigger: TTTCTTGGCAACTGGGGGTCAAGGCGAATACTTAAC...TGGAACCCCTGATGACACATGTGAAACCCTTAATAACACATGTGAAATCCATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR GCA 90 bp | ATTCCCAAGGATCTTGTGAGAGAGCCTCTAAAATTAGGCTTAGCTTTGTCAAAACTTGTGTGCGGTTTCTaGAAACTGCTGGGCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IPKDLVREPLKLGLALSKLVCGF*KLLGTV Trigger: AACAGTGCCCAGCAGTTTGCAGAAACCGCACACAAG...TTTTGACAAAGCTAAGCCTAATTTTAGAGGCTCTCTCACAAGATCCTTGGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CCA 90 bp | CACATTAGCAGCATCACAATTCTGAAATTAGGAATGGAACCTATCTTAACTAGTCTCTGGCAGGTGTGGTaGAGGATCTGGAAGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HISSITILKLGMEPILTSLWQVW*RIWKKV Trigger: CACCTTCTTCCAGATCCTCCACCACACCTGCCAGAG...ACTAGTTAAGATAGGTTCCATTCCTAATTTCAGAATTGTGATGCTGCTAATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CCA 90 bp | CACATTAGCAGCATCACAATTCTGAAATTAGGAATGGAACCTATCTTAACTAGTTCTGTGAGGTACCTCTaGCAGGTGTGGTGGAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: HISSITILKLGMEPILTSSVRYL*QVWWRI Trigger: GATCCTCCACCACACCTGCCAGAGGTACCTCACAGA...ACTAGTTAAGATAGGTTCCATTCCTAATTTCAGAATTGTGATGCTGCTAATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| 3UTR CAA 72 bp | TGTGCTTCTGCCTGTTCAGGAACAGTTGGCCCAAAGTaGTCAGATAGCCAACAAGCAATTTTATTGTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: CASACSGTVGPK*SDSQQAILLLT Trigger: AGTCAACAATAAAATTGCTTGTTGGCTATCTGACAACTTTGGGCCAACTGTTCCTGAACAGGCAGAAGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| 3UTR CAA 72 bp | AAAACTCCATGCACTGCAGTATGTGGCATGTGTAGCTaGCCTCATTGCTTTATGAGGAACAAGCATGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KTPCTAVCGMCS*PHCFMRNKHVF Trigger: AAAAACATGCTTGTTCCTCATAAAGCAATGAGGCAAGCTACACATGCCACATACTGCAGTGCATGGAGTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR GCA 90 bp | CACATTAGCAGCATCACAATTCTGAAATTAGGAATGGAACCTATCTTAACTAGTGCGGTTTCTGCAAACTaGTGGGCACTGTTCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: HISSITILKLGMEPILTSAVSAN*WALFFM Trigger: CATGAAGAACAGTGCCCAGCAGTTTGCAGAAACCGC...ACTAGTTAAGATAGGTTCCATTCCTAATTTCAGAATTGTGATGCTGCTAATGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CCA 90 bp | GCAATGGATTTCACATGTGTTATTAAGGGTTTCACATGTGTCATCAGGGGTTCCAACATTTATGCTTCATaGCAAGCTTGTGTGCGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: AMDFTCVIKGFTCVIRGSNIYAS*QACVRF Trigger: AAACCGCACACAAGCTTGCCATGAAGCATAAATGTT...GGAACCCCTGATGACACATGTGAAACCCTTAATAACACATGTGAAATCCATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| 3UTR CAA 72 bp | TTCACCTGGATTATCTGCCTAAAAGGATTATTACACTaGTTTGCAGCAAATCCCATCCTCTTCCTGACATTA | + |
|
Preference number: 4 (lower is better) Translates to: FTWIICLKGLLH*FAANPILFLTL Trigger: TAATGTCAGGAAGAGGATGGGATTTGCTGCAAACAAGTGTAATAATCCTTTTAGGCAGATAATCCAGGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CCA 90 bp | CACATTAGCAGCATCACAATTCTGAAATTAGGAATGGAACCTATCTTAACTAGTTCAATACCATTAACTTaGCGAAGCTGCTCAAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: HISSITILKLGMEPILTSSIPLT*RSCSSI Trigger: GATGCTTGAGCAGCTTCGCCAAGTTAATGGTATTGA...ACTAGTTAAGATAGGTTCCATTCCTAATTTCAGAATTGTGATGCTGCTAATGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| 3UTR CAA 72 bp | CCAAAGTTGTCAGATAGCCAACAAGCAATTTTATTGTaGACTTGTGTGGGGAAAGTTAGACTATTTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PKLSDSQQAILL*TCVGKVRLFLS Trigger: TGAGAGAAATAGTCTAACTTTCCCCACACAAGTCAACAATAAAATTGCTTGTTGGCTATCTGACAACTTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CCA 90 bp | CACATTAGCAGCATCACAATTCTGAAATTAGGAATGGAACCTATCTTAACTAGTAACATTTATGCTTCATaGCAAGCTTGTGTGCGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HISSITILKLGMEPILTSNIYAS*QACVRF Trigger: AAACCGCACACAAGCTTGCCATGAAGCATAAATGTT...ACTAGTTAAGATAGGTTCCATTCCTAATTTCAGAATTGTGATGCTGCTAATGTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS CCA 90 bp | GGCTTCCTGTCTGTGAGGTACCTCTGGCAGGTGTGGTGGAGGATCTaGAAGAAGGTGCACTTTTCTGAGGCCGTGCTAGCAACCCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: GFLSVRYLWQVWWRI*KKVHFSEAVLATHW Trigger: CCAGTGGGTTGCTAGCACGGCCTCAGAAAAGTGCACCTTCTTCCAGATCCTCCACCACACCTGCCAGAGGTACCTCACAGACAGGAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS CCA 90 bp | TTCTCCTCTGCTCGGCCTAACCGTTCCCCACGCTCGTTCAAGGCCTaGCTTGCCTTCTGTACTGCACTGGTCACACTATCAGCTGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: FSSARPNRSPRSFKA*LAFCTALVTLSAAE Trigger: TTCAGCAGCTGATAGTGTGACCAGTGCAGTACAGAAGGCAAGCCAGGCCTTGAACGAGCGTGGGGAACGGTTAGGCCGAGCAGAGGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTTATCAGGGATTTCTCTGCAAGAGGCTGGACAGCTGAGAAGGGGCAGCAACGTTCAAGGCCTGGCTaGCCTTCTGTACTGCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: CVIRDFSARGWTAEKGQQRSRPG*PSVLHW Trigger: CCAGTGCAGTACAGAAGGCAAGCCAGGCCTTGAACG...TTGCTGCCCCTTCTCAGCTGTCCAGCCTCTTGCAGAGAAATCCCTGATAACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS TCA 90 bp | CCTCTGGCAGGTGTGGTGGAGGATCTGGAAGAAGGTGCACTTTTCTaGGGCCGTGCTAGCAACCCACTGGTCAAAGGCATTTTCAAACAA | + |
|
Preference number: 5 (lower is better) Translates to: PLAGVVEDLEEGALF*GRASNPLVKGIFKQ Trigger: TTGTTTGAAAATGCCTTTGACCAGTGGGTTGCTAGCACGGCCTCAGAAAAGTGCACCTTCTTCCAGATCCTCCACCACACCTGCCAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CAA 90 bp | TGGTCTCAGCCCTGTGTTCTCTCGCTGTTCCACTTCATGCAGGGCACTTATCCTTTCTTTGTCCTTCTCTaGACTTGGATGGCTCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WSQPCVLSLFHFMQGTYPFFVLL*TWMAPS Trigger: GCTGGGAGCCATCCAAGTCAAGAGAAGGACAAAGAA...AGGATAAGTGCCCTGCATGAAGTGGAACAGCGAGAGAACACAGGGCTGAGACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139750.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGGCGTCTGAAAACTCCATGCACTGCAGTATGTGGCATGTGTAGCTTGCCTCGCCTTGACCCCCAGTaGCCAAGAAAGGAATCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: PRRLKTPCTAVCGMCSLPRLDPQ*PRKESF Trigger: AAAAGATTCCTTTCTTGGCAACTGGGGGTCAAGGCG...AGGCAAGCTACACATGCCACATACTGCAGTGCATGGAGTTTTCAGACGCCTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CAA 90 bp | TGGTCTCAGCCCTGTGTTCTCTCGCTGTTCCACTTCATGCAGGGCACTTATCCTGGTGCAAAAATTTCCTaGCTGATGGCAGACTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: WSQPCVLSLFHFMQGTYPGAKIS*LMADLA Trigger: TGCCAAGTCTGCCATCAGCAAGGAAATTTTTGCACC...AGGATAAGTGCCCTGCATGAAGTGGAACAGCGAGAGAACACAGGGCTGAGACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139750.2 |
||
| CDS-3UTR CAA 90 bp | GTTGGTGCTTTTGGAGCAGAGAGTCTTTCTTGCGTGTGGTCTCAGCCCTGTGTTCGCCTTGACCCCCAGTaGCCAAGAAAGGAATCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VGAFGAESLSCVWSQPCVRLDPQ*PRKESF Trigger: AAAAGATTCCTTTCTTGGCAACTGGGGGTCAAGGCG...AACACAGGGCTGAGACCACACGCAAGAAAGACTCTCTGCTCCAAAAGCACCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139750.2 |
||
| CDS TCA 90 bp | AACTTGGCGAAGCTGCTCAAGCATCCATTGGGATCTTCGGACGAATaGTGTGGAGCCCTCAAACTGTTTGACCTTCGTGATAGATGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: NLAKLLKHPLGSSDE*CGALKLFDLRDRCL Trigger: CAGGCATCTATCACGAAGGTCAAACAGTTTGAGGGCTCCACATCATTCGTCCGAAGATCCCAATGGATGCTTGAGCAGCTTCGCCAAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 ENSMUST00000143376.8 |
||
| CDS CCA 90 bp | CATTTATGCTTCATGGCAAGCTTGTGTGCGGTTTCTGCAAACTGCTaGGCACTGTTCTTCATGTCTTCTGTCTTCTCCTCTGCTCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: HLCFMASLCAVSANC*ALFFMSSVFSSARP Trigger: AGGCCGAGCAGAGGAGAAGACAGAAGACATGAAGAACAGTGCCCAGCAGTTTGCAGAAACCGCACACAAGCTTGCCATGAAGCATAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS GCA 90 bp | TCTGCAGAATCCCGATTAGGATCAATACCATTAACTTGGCGAAGCTaGTCAAGCATCCATTGGGATCTTCGGACGAATGATGTGGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SAESRLGSIPLTWRS*SSIHWDLRTNDVEP Trigger: GGGCTCCACATCATTCGTCCGAAGATCCCAATGGATGCTTGAGCAGCTTCGCCAAGTTAATGGTATTGATCCTAATCGGGATTCTGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS GCA 90 bp | CAACATTTATGCTTCATGGCAAGCTTGTGTGCGGTTTCTGCAAACTaGTGGGCACTGTTCTTCATGTCTTCTGTCTTCTCCTCTGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: QHLCFMASLCAVSAN*WALFFMSSVFSSAR Trigger: CCGAGCAGAGGAGAAGACAGAAGACATGAAGAACAGTGCCCAGCAGTTTGCAGAAACCGCACACAAGCTTGCCATGAAGCATAAATGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CAA 90 bp | AAAGAAGCAGCCCCGTCTGGACGTCTTGTAATAACTGCTGAACAAACTCCTCCATGTCCTTCTCTTGACTaGGATGGCTCCCAGCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: KEAAPSGRLVITAEQTPPCPSLD*DGSQHS Trigger: AGAATGCTGGGAGCCATCCAAGTCAAGAGAAGGACA...TGGAGGAGTTTGTTCAGCAGTTATTACAAGACGTCCAGACGGGGCTGCTTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CAA 90 bp | GCAATGGATTTCACATGTGTTATTAAGGGTTTCACATGTGTCATCAGGGGTTCCCGTTCAAGGCCTGGCTaGCCTTCTGTACTGCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: AMDFTCVIKGFTCVIRGSRSRPG*PSVLHW Trigger: CCAGTGCAGTACAGAAGGCAAGCCAGGCCTTGAACG...GGAACCCCTGATGACACATGTGAAACCCTTAATAACACATGTGAAATCCATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CAA 90 bp | GTGCAGGGCATTTACATCTATATGCTAAGGAGGAAGACTCAGCTTTCAGTGTGCTTCTTTGTCCTTCTCTaGACTTGGATGGCTCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VQGIYIYMLRRKTQLSVCFFVLL*TWMAPS Trigger: GCTGGGAGCCATCCAAGTCAAGAGAAGGACAAAGAA...GCACACTGAAAGCTGAGTCTTCCTCCTTAGCATATAGATGTAAATGCCCTGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CAA 90 bp | GTGCAGGGCATTTACATCTATATGCTAAGGAGGAAGACTCAGCTTTCAGTGTGCGCCTGTGTGGGTTTTTaGTTTGTCACTGACAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VQGIYIYMLRRKTQLSVCACVGF*FVTDRQ Trigger: CTGCCTGTCAGTGACAAACAAAAAACCCACACAGGC...GCACACTGAAAGCTGAGTCTTCCTCCTTAGCATATAGATGTAAATGCCCTGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS CCA 90 bp | TTAGGATCAATACCATTAACTTGGCGAAGCTGCTCAAGCATCCATTaGGATCTTCGGACGAATGATGTGGAGCCCTCAAACTGTTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: LGSIPLTWRSCSSIH*DLRTNDVEPSNCLT Trigger: GGTCAAACAGTTTGAGGGCTCCACATCATTCGTCCGAAGATCCCAATGGATGCTTGAGCAGCTTCGCCAAGTTAATGGTATTGATCCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CAA 90 bp | GTGCAGGGCATTTACATCTATATGCTAAGGAGGAAGACTCAGCTTTCAGTGTGCGGTGCAAAAATTTCCTaGCTGATGGCAGACTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VQGIYIYMLRRKTQLSVCGAKIS*LMADLA Trigger: TGCCAAGTCTGCCATCAGCAAGGAAATTTTTGCACC...GCACACTGAAAGCTGAGTCTTCCTCCTTAGCATATAGATGTAAATGCCCTGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CAA 90 bp | GACCACTACAGCTACATTCCAGGAAGAAGTGGAAATGCTGGCAAGTTCCTTTTTTGTCCTTCTCTTGACTaGGATGGCTCCCAGCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: DHYSYIPGRSGNAGKFLFCPSLD*DGSQHS Trigger: AGAATGCTGGGAGCCATCCAAGTCAAGAGAAGGACA...AAAAAGGAACTTGCCAGCATTTCCACTTCTTCCTGGAATGTAGCTGTAGTGGTC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CAA 90 bp | GACCACTACAGCTACATTCCAGGAAGAAGTGGAAATGCTGGCAAGTTCCTTTTTTTCTTTGTCCTTCTCTaGACTTGGATGGCTCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DHYSYIPGRSGNAGKFLFFFVLL*TWMAPS Trigger: GCTGGGAGCCATCCAAGTCAAGAGAAGGACAAAGAA...AAAAAGGAACTTGCCAGCATTTCCACTTCTTCCTGGAATGTAGCTGTAGTGGTC 47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CAA 90 bp | CCCAGGCGTCTGAAAACTCCATGCACTGCAGTATGTGGCATGTGTAGCTTGCCTTCCCATAATTTTGGATaGGCAGTTAATAAACTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PRRLKTPCTAVCGMCSLPSHNFG*AVNKLW Trigger: CCAGAGTTTATTAACTGCCAATCCAAAATTATGGGA...AGGCAAGCTACACATGCCACATACTGCAGTGCATGGAGTTTTCAGACGCCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CAA 90 bp | GCAATGGATTTCACATGTGTTATTAAGGGTTTCACATGTGTCATCAGGGGTTCCGCCTGTGTGGGTTTTTaGTTTGTCACTGACAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AMDFTCVIKGFTCVIRGSACVGF*FVTDRQ Trigger: CTGCCTGTCAGTGACAAACAAAAAACCCACACAGGC...GGAACCCCTGATGACACATGTGAAACCCTTAATAACACATGTGAAATCCATTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CAA 90 bp | CAATGGATTTCACATGTGTTATTAAGGGTTTCACATGTGTCATCAGGGGTTCCACGCCTTGACCCCCAGTaGCCAAGAAAGGAATCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: QWISHVLLRVSHVSSGVPRLDPQ*PRKESF Trigger: AAAAGATTCCTTTCTTGGCAACTGGGGGTCAAGGCG...TGGAACCCCTGATGACACATGTGAAACCCTTAATAACACATGTGAAATCCATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS CCA 90 bp | AAATCAAACTCTGCAGAATCCCGATTAGGATCAATACCATTAACTTaGCGAAGCTGCTCAAGCATCCATTGGGATCTTCGGACGAATGAT | + |
|
Preference number: 5 (lower is better) Translates to: KSNSAESRLGSIPLT*RSCSSIHWDLRTND Trigger: ATCATTCGTCCGAAGATCCCAATGGATGCTTGAGCAGCTTCGCCAAGTTAATGGTATTGATCCTAATCGGGATTCTGCAGAGTTTGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CAA 90 bp | GACCACTACAGCTACATTCCAGGAAGAAGTGGAAATGCTGGCAAGTTCCTTTTTATCAATACCATTAACTaGGCGAAGCTGCTCAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: DHYSYIPGRSGNAGKFLFINTIN*AKLLKH Trigger: ATGCTTGAGCAGCTTCGCCAAGTTAATGGTATTGAT...AAAAAGGAACTTGCCAGCATTTCCACTTCTTCCTGGAATGTAGCTGTAGTGGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CAA 90 bp | CACATTAGCAGCATCACAATTCTGAAATTAGGAATGGAACCTATCTTAACTAGTGGTGCAAAAATTTCCTaGCTGATGGCAGACTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: HISSITILKLGMEPILTSGAKIS*LMADLA Trigger: TGCCAAGTCTGCCATCAGCAAGGAAATTTTTGCACC...ACTAGTTAAGATAGGTTCCATTCCTAATTTCAGAATTGTGATGCTGCTAATGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CAA 90 bp | ATTCCCAAGGATCTTGTGAGAGAGCCTCTAAAATTAGGCTTAGCTTTGTCAAAAATCAATACCATTAACTaGGCGAAGCTGCTCAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: IPKDLVREPLKLGLALSKINTIN*AKLLKH Trigger: ATGCTTGAGCAGCTTCGCCAAGTTAATGGTATTGAT...TTTTGACAAAGCTAAGCCTAATTTTAGAGGCTCTCTCACAAGATCCTTGGGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS-3UTR CAA 90 bp | CACATTAGCAGCATCACAATTCTGAAATTAGGAATGGAACCTATCTTAACTAGTTCCCATAATTTTGGATaGGCAGTTAATAAACTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HISSITILKLGMEPILTSSHNFG*AVNKLW Trigger: CCAGAGTTTATTAACTGCCAATCCAAAATTATGGGA...ACTAGTTAAGATAGGTTCCATTCCTAATTTCAGAATTGTGATGCTGCTAATGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS CAA 90 bp | CCTCTGCTCGGCCTAACCGTTCCCCACGCTCGTTCAAGGCCTGGCTaGCCTTCTGTACTGCACTGGTCACACTATCAGCTGCTGAATGGA | + |
|
Preference number: 6 (lower is better) Translates to: PLLGLTVPHARSRPG*PSVLHWSHYQLLNG Trigger: TCCATTCAGCAGCTGATAGTGTGACCAGTGCAGTACAGAAGGCAAGCCAGGCCTTGAACGAGCGTGGGGAACGGTTAGGCCGAGCAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS CCA 72 bp | GCTCGGCCTAACCGTTCCCCACGCTCGTTCAAGGCCTaGCTTGCCTTCTGTACTGCACTGGTCACACTATCA | + |
|
Preference number: 6 (lower is better) Translates to: ARPNRSPRSFKA*LAFCTALVTLS Trigger: TGATAGTGTGACCAGTGCAGTACAGAAGGCAAGCCAGGCCTTGAACGAGCGTGGGGAACGGTTAGGCCGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS CAA 72 bp | GGCCTAACCGTTCCCCACGCTCGTTCAAGGCCTGGCTaGCCTTCTGTACTGCACTGGTCACACTATCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GLTVPHARSRPG*PSVLHWSHYQL Trigger: CAGCTGATAGTGTGACCAGTGCAGTACAGAAGGCAAGCCAGGCCTTGAACGAGCGTGGGGAACGGTTAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS CCA 72 bp | GGCTTCCTGTCTGTGAGGTACCTCTGGCAGGTGTGGTaGAGGATCTGGAAGAAGGTGCACTTTTCTGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GFLSVRYLWQVW*RIWKKVHFSEA Trigger: GGCCTCAGAAAAGTGCACCTTCTTCCAGATCCTCCACCACACCTGCCAGAGGTACCTCACAGACAGGAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
||
| CDS CCA 72 bp | TCTGTGAGGTACCTCTGGCAGGTGTGGTGGAGGATCTaGAAGAAGGTGCACTTTTCTGAGGCCGTGCTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SVRYLWQVWWRI*KKVHFSEAVLA Trigger: TGCTAGCACGGCCTCAGAAAAGTGCACCTTCTTCCAGATCCTCCACCACACCTGCCAGAGGTACCTCACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| CDS TCA 72 bp | GGTGTGGTGGAGGATCTGGAAGAAGGTGCACTTTTCTaGGGCCGTGCTAGCAACCCACTGGTCAAAGGCATT | + |
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Preference number: 6 (lower is better) Translates to: GVVEDLEEGALF*GRASNPLVKGI Trigger: AATGCCTTTGACCAGTGGGTTGCTAGCACGGCCTCAGAAAAGTGCACCTTCTTCCAGATCCTCCACCACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| CDS GCA 72 bp | TGCTTCATGGCAAGCTTGTGTGCGGTTTCTGCAAACTaGTGGGCACTGTTCTTCATGTCTTCTGTCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: CFMASLCAVSAN*WALFFMSSVFS Trigger: GGAGAAGACAGAAGACATGAAGAACAGTGCCCAGCAGTTTGCAGAAACCGCACACAAGCTTGCCATGAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| CDS TCA 72 bp | AAGCTGCTCAAGCATCCATTGGGATCTTCGGACGAATaGTGTGGAGCCCTCAAACTGTTTGACCTTCGTGAT | + |
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Preference number: 6 (lower is better) Translates to: KLLKHPLGSSDE*CGALKLFDLRD Trigger: ATCACGAAGGTCAAACAGTTTGAGGGCTCCACATCATTCGTCCGAAGATCCCAATGGATGCTTGAGCAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 ENSMUST00000143376.8 |
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| CDS CCA 72 bp | ATACCATTAACTTGGCGAAGCTGCTCAAGCATCCATTaGGATCTTCGGACGAATGATGTGGAGCCCTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: IPLTWRSCSSIH*DLRTNDVEPSN Trigger: GTTTGAGGGCTCCACATCATTCGTCCGAAGATCCCAATGGATGCTTGAGCAGCTTCGCCAAGTTAATGGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| CDS TCA 72 bp | TGCCTTCTGTACTGCACTGGTCACACTATCAGCTGCTaGATGGAGGATGCTGTTTCCTCCCATAATTTTGGA | + |
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Preference number: 6 (lower is better) Translates to: CLLYCTGHTISC*MEDAVSSHNFG Trigger: TCCAAAATTATGGGAGGAAACAGCATCCTCCATTCAGCAGCTGATAGTGTGACCAGTGCAGTACAGAAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| CDS CCA 72 bp | TCTGCAGAATCCCGATTAGGATCAATACCATTAACTTaGCGAAGCTGCTCAAGCATCCATTGGGATCTTCGG | + |
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Preference number: 6 (lower is better) Translates to: SAESRLGSIPLT*RSCSSIHWDLR Trigger: CCGAAGATCCCAATGGATGCTTGAGCAGCTTCGCCAAGTTAATGGTATTGATCCTAATCGGGATTCTGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| CDS CAA 72 bp | CTCTGCAGAATCCCGATTAGGATCAATACCATTAACTaGGCGAAGCTGCTCAAGCATCCATTGGGATCTTCG | + |
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Preference number: 6 (lower is better) Translates to: LCRIPIRINTIN*AKLLKHPLGSS Trigger: CGAAGATCCCAATGGATGCTTGAGCAGCTTCGCCAAGTTAATGGTATTGATCCTAATCGGGATTCTGCAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| CDS GCA 72 bp | TCCCGATTAGGATCAATACCATTAACTTGGCGAAGCTaGTCAAGCATCCATTGGGATCTTCGGACGAATGAT | + |
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Preference number: 6 (lower is better) Translates to: SRLGSIPLTWRS*SSIHWDLRTND Trigger: ATCATTCGTCCGAAGATCCCAATGGATGCTTGAGCAGCTTCGCCAAGTTAATGGTATTGATCCTAATCGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| CDS CCA 72 bp | TTCTGTACTGCACTGGTCACACTATCAGCTGCTGAATaGAGGATGCTGTTTCCTCCCATAATTTTGGATTGG | + |
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Preference number: 6 (lower is better) Translates to: FCTALVTLSAAE*RMLFPPIILDW Trigger: CCAATCCAAAATTATGGGAGGAAACAGCATCCTCCATTCAGCAGCTGATAGTGTGACCAGTGCAGTACAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 |
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| CDS CAA 72 bp | GGCAGATATAAGTTAAGTATTCGCCTTGACCCCCAGTaGCCAAGAAAGGAATCTTTTTCTTTGTCCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: GRYKLSIRLDPQ*PRKESFSLSFS Trigger: AGAGAAGGACAAAGAAAAAGATTCCTTTCTTGGCAACTGGGGGTCAAGGCGAATACTTAACTTATATCTGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000053768.14 ENSMUST00000120531.8 ENSMUST00000139750.2 ENSMUST00000143376.8 |
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