RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STXBP5L (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022829

Ensembl transcript IDs: ENSMUST00000114775.8, ENSMUST00000114780.8, ENSMUST00000114781.8, ENSMUST00000114782.8, ENSMUST00000114787.8

Found 283 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CAA 90 bp TCCATTCCACATGGGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGTTCCAGCCTTTCTGTaGTACAGCATCTTTGCCTTT +
Preference number: 3 (lower is better)
Translates to: SIPHGERQIRPLSWDFNRVPAFL*YSIFAF
Trigger: AAAGGCAAAGATGCTGTACAACAGAAAGGCTGGAAC...CCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCCCATGTGGAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
3UTR TCA 72 bp GGATACTTCACTCTCCTGGCAATCCTTGGTTATGAATaGATGAGAGCTGCAAATGATGTGAATTACTACAGA +
Preference number: 3 (lower is better)
Translates to: GYFTLLAILGYE*MRAANDVNYYR
Trigger: TCTGTAGTAATTCACATCATTTGCAGCTCTCATTCATTCATAACCAAGGATTGCCAGGAGAGTGAAGTATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114787.8
3UTR CCA 72 bp CAAATGACATGCCAAGATGATAATATCCATTCCACATaGGGAAAGACAAATTCGGCCATTATCTTGGGATTT +
Preference number: 3 (lower is better)
Translates to: QMTCQDDNIHST*GKTNSAIILGF
Trigger: AAATCCCAAGATAATGGCCGAATTTGTCTTTCCCCATGTGGAATGGATATTATCATCTTGGCATGTCATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp CGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATGCAGTCCCTCCTGGATaGACAGAGCCACTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: RPLSWDFNRGSSLSVVQHAVPPG*TEPLPA
Trigger: GGCTGGAAGTGGCTCTGTCCATCCAGGAGGGACTGC...ATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp GGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCACTGTTACTGCCACTaGTGCTACCACTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: GKDKFGHYLGILTGVPAFHCYCH*CYHCQG
Trigger: CCCCTGGCAGTGGTAGCAGCAGTGGCAGTAACAGTG...AAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp TCCATTCCACATGGGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGCTCTCTCGGAAGCCCTaGAGTCCCTCCTGGATGGAC +
Preference number: 4 (lower is better)
Translates to: SIPHGERQIRPLSWDFNRLSRKP*SPSWMD
Trigger: GTCCATCCAGGAGGGACTGCAGGGCTTCCGAGAGAG...CCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCCCATGTGGAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp AGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGCAGTCCCTCCTGGATaGACAGAGCCACTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: RQIRPLSWDFNRGSSLSVAVPPG*TEPLPA
Trigger: GGCTGGAAGTGGCTCTGTCCATCCAGGAGGGACTGC...AACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp TCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTGCCTTTGTTACTGCCACTGCTaGTACCACTGCCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SWDFNRGSSLSVVQHLCLCYCHC*YHCQGK
Trigger: CTTCCCCTGGCAGTGGTAGCAGCAGTGGCAGTAACA...AAGGCAAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp GGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGCGCTGGTCATCATaGCCGCAGTCTTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GKDKFGHYLGILTGVPAFLRWSS*PQSSLP
Trigger: TGGAAGAGAAGACTGCGGGCATGATGACCAGCGCAG...AAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp TCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTGCCTTGACCGGGGCTGTCGCTaGTACAGGTCACTTGATCTA +
Preference number: 4 (lower is better)
Translates to: SWDFNRGSSLSVVQHLCLDRGCR*YRSLDL
Trigger: TAGATCAAGTGACCTGTACCAGCGACAGCCCCGGTC...AAGGCAAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp GGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTGACCGGGGCTGTCGCTaGTACAGGTCACTTGATCTA +
Preference number: 4 (lower is better)
Translates to: GKDKFGHYLGILTGVPAFDRGCR*YRSLDL
Trigger: TAGATCAAGTGACCTGTACCAGCGACAGCCCCGGTC...AAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp GGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTACAACTGGGCCTGGATaGGTCTTGGTGGAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: GKDKFGHYLGILTGVPAFTTGPG*VLVESS
Trigger: TGAACTCTCCACCAAGACTCATCCAGGCCCAGTTGT...AAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp GGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTAGGCACTGTTGCACATaGCCACCACATCTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: GKDKFGHYLGILTGVPAFRHCCT*PPHLLA
Trigger: TGCAAGCAGATGTGGTGGTCATGTGCAACAGTGCCT...AAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp TCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTGCCTTCCAGAACTGCAACTCTaGGAGGTTGGACTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: SWDFNRGSSLSVVQHLCLPELQL*EVGLVQ
Trigger: CTGCACAAGTCCAACCTCTCAGAGTTGCAGTTCTGG...AAGGCAAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp CAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTATGTTACTGCCACTGCTaGTACCACTGCCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: QIRPLSWDFNRGSSLSVVCYCHC*YHCQGK
Trigger: CTTCCCCTGGCAGTGGTAGCAGCAGTGGCAGTAACA...TACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp CGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATGAGGCTGCATTAAACTaGCAGTTCTGTCCATGCAGG +
Preference number: 4 (lower is better)
Translates to: RPLSWDFNRGSSLSVVQHEAALN*QFCPCR
Trigger: CCTGCATGGACAGAACTGGCAGTTTAATGCAGCCTC...ATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp AGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTCTGCGCTGGTCATCATaGCCGCAGTCTTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: RQIRPLSWDFNRGSSLSVLRWSS*PQSSLP
Trigger: TGGAAGAGAAGACTGCGGGCATGATGACCAGCGCAG...AACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp TCCATTCCACATGGGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGCCCTTCTATACTACCTaGCCCAGGGATGTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: SIPHGERQIRPLSWDFNRPFYTT*PRDVLC
Trigger: GCACAGCACATCCCTGGGCCAGGTAGTATAGAAGGG...CCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCCCATGTGGAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp CAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACCCTTCTATACTACCTaGCCCAGGGATGTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: QIRPLSWDFNRGSSLSVVPFYTT*PRDVLC
Trigger: GCACAGCACATCCCTGGGCCAGGTAGTATAGAAGGG...TACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp GGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTAAAACGCTTCTGCGCTaGTCATCATGCCCGCAGTCT +
Preference number: 4 (lower is better)
Translates to: GKDKFGHYLGILTGVPAFKTLLR*SSCPQS
Trigger: AGACTGCGGGCATGATGACCAGCGCAGAAGCGTTTT...AAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp AGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTATGAAGCGTGTCATCTaGACTCGCACTGACCAACGC +
Preference number: 4 (lower is better)
Translates to: RQIRPLSWDFNRGSSLSVMKRVI*TRTDQR
Trigger: GCGTTGGTCAGTGCGAGTTCAGATGACACGCTTCAT...AACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp TCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTGCCTTGGTCTGGGAAGGCAGTaGGAAGACTTTGGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: SWDFNRGSSLSVVQHLCLGLGRQ*EDFGLF
Trigger: AAACAAGCCAAAGTCTTCTCACTGCCTTCCCAGACC...AAGGCAAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp TCCATTCCACATGGGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGCCAGAACTGCAACTCTaGGAGGTTGGACTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: SIPHGERQIRPLSWDFNRPELQL*EVGLVQ
Trigger: CTGCACAAGTCCAACCTCTCAGAGTTGCAGTTCTGG...CCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCCCATGTGGAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp GGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTCCATGCAAGCAGCTaGCTGTGCCTTTCTAAATGG +
Preference number: 4 (lower is better)
Translates to: GKDKFGHYLGILTGVPAFLHASS*LCLSKW
Trigger: CCATTTAGAAAGGCACAGTCAGCTGCTTGCATGGAG...AAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp TCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAAATGACATGCCACACTGTTACTGCCACTaGTGCTACCACTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SKGLPIVSKHEFLANDMPHCYCH*CYHCQG
Trigger: CCCCTGGCAGTGGTAGCAGCAGTGGCAGTAACAGTG...TGGCATGTCATTTGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp TCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAAATGACATGCCACCCCACCACTGTTACTaGCACTGCTGCTACCACTGC +
Preference number: 4 (lower is better)
Translates to: SKGLPIVSKHEFLANDMPPHHCY*HCCYHC
Trigger: GCAGTGGTAGCAGCAGTGGCAGTAACAGTGGTGGGG...TGGCATGTCATTTGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp TCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTGCCTTGAGGCTGCATTAAACTaGCAGTTCTGTCCATGCAGG +
Preference number: 4 (lower is better)
Translates to: SWDFNRGSSLSVVQHLCLEAALN*QFCPCR
Trigger: CCTGCATGGACAGAACTGGCAGTTTAATGCAGCCTC...AAGGCAAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp CGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATACCACCACATCTGCTTaGAATATGAACGACGTCTCG +
Preference number: 4 (lower is better)
Translates to: RPLSWDFNRGSSLSVVQHTTTSA*NMNDVS
Trigger: CGAGACGTCGTTCATATTGCAAGCAGATGTGGTGGT...ATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp CATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTCTTGGAAAACGCTTCTaGGCTGGTCATCATGCCCGC +
Preference number: 4 (lower is better)
Translates to: HYLGILTGVPAFLLYSIFLGKRF*AGHHAR
Trigger: GCGGGCATGATGACCAGCGCAGAAGCGTTTTCCAAG...AAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp GGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCAGTGTCCATTTACATaGTCTGAGGTGGGGGACTTG +
Preference number: 4 (lower is better)
Translates to: GKDKFGHYLGILTGVPAFQCPFT*SEVGDL
Trigger: CAAGTCCCCCACCTCAGACCATGTAAATGGACACTG...AAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp GGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTGCCTTTCTAAATaGTGGTCTTCCAGGACCCCA +
Preference number: 4 (lower is better)
Translates to: GKDKFGHYLGILTGVPAFLCLSK*WSSRTP
Trigger: TGGGGTCCTGGAAGACCACCATTTAGAAAGGCACAG...AAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp CGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTCAGATTCCACAAATaGAGCGTGTCATCTGAACTC +
Preference number: 4 (lower is better)
Translates to: RPLSWDFNRGSSLSVVQHLRFHK*SVSSEL
Trigger: GAGTTCAGATGACACGCTTCATTTGTGGAATCTGAG...ATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp CATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTACAACTGGGCCTGGATaGGTCTTGGTGGAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: HYLGILTGVPAFLLYSIFTTGPG*VLVESS
Trigger: TGAACTCTCCACCAAGACTCATCCAGGCCCAGTTGT...AAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp TCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTGCCTTGCAAGCTTTGTCATATaGCAGCCCGCCAGAGAATAT +
Preference number: 4 (lower is better)
Translates to: SWDFNRGSSLSVVQHLCLASFVI*QPAREY
Trigger: ATATTCTCTGGCGGGCTGTCATATGACAAAGCTTGC...AAGGCAAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp CAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTATCCAAGCTCCTCCACTaGCTGGCCATTCCTTATTAC +
Preference number: 4 (lower is better)
Translates to: QIRPLSWDFNRGSSLSVVSKLLH*LAIPYY
Trigger: GTAATAAGGAATGGCCAGTCAGTGGAGGAGCTTGGA...TACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp CGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTGAAGGAGGAAGTTaGGAGGAGAGATCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: RPLSWDFNRGSSLSVVQHLEGGS*EERSGN
Trigger: ATTTCCAGATCTCTCCTCTCAACTTCCTCCTTCAAG...ATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp CAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTAGCACTGTCTTCTGTATaGAATCCACCACAACCAGCC +
Preference number: 4 (lower is better)
Translates to: QIRPLSWDFNRGSSLSVVALSSV*NPPQPA
Trigger: GGCTGGTTGTGGTGGATTTCATACAGAAGACAGTGC...TACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp AGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTCACTGCTCCTTTCAGTaGGAGGAATGTACCACTTGG +
Preference number: 4 (lower is better)
Translates to: RQIRPLSWDFNRGSSLSVHCSFQ*EECTTW
Trigger: CCAAGTGGTACATTCCTCTCACTGAAAGGAGCAGTG...AACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp TCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAAATGACATGCCAGGATGCTTTTCCTGCTaGGGCTTCCCCGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: SKGLPIVSKHEFLANDMPGCFSC*GFPEEF
Trigger: GAACTCTTCGGGGAAGCCTCAGCAGGAAAAGCATCC...TGGCATGTCATTTGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp TGTACAGGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCCTCTCTCGGAAGCCCTaGAGTCCCTCCTGGATGGAC +
Preference number: 4 (lower is better)
Translates to: CTGNFKSKGLPIVSKHEFLSRKP*SPSWMD
Trigger: GTCCATCCAGGAGGGACTGCAGGGCTTCCGAGAGAG...GAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCCTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp GGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTTTCTGGATAAGTTTGTaGTCCGAGGTTCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: GKDKFGHYLGILTGVPAFFWISL*SEVPSS
Trigger: GGAGCTTGGAACCTCGGAGCACAAACTTATCCAGAA...AAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp CAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACCACAACCAGCCCAGTaGAGTTTCCAAATGCCACTA +
Preference number: 4 (lower is better)
Translates to: QIRPLSWDFNRGSSLSVVPQPAQ*SFQMPL
Trigger: TAGTGGCATTTGGAAACTGCACTGGGCTGGTTGTGG...TACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp CGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATGGTCAATGGTCCCCATaGTTAATAGCACTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: RPLSWDFNRGSSLSVVQHGQWSP*LIALSS
Trigger: AGAAGACAGTGCTATTAAGCATGGGGACCATTGACC...ATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp GGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTAAGCCTGCAATGAACTaGCTGTTCTTTCGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: GKDKFGHYLGILTGVPAFKPAMN*LFFRGD
Trigger: GTCTCCTCGAAAGAACAGGCAGTTCATTGCAGGCTT...AAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114782.8
CDS-3UTR CCA 90 bp TGTACAGGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCCCCTGCAGTCCCTCCTaGATGGACAGAGCCACTTCC +
Preference number: 4 (lower is better)
Translates to: CTGNFKSKGLPIVSKHEFPCSPS*MDRATS
Trigger: GGAAGTGGCTCTGTCCATCCAGGAGGGACTGCAGGG...GAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCCTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp GGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCACCCTGCAGTCCCTCCTaGATGGACAGAGCCACTTCC +
Preference number: 4 (lower is better)
Translates to: GNFKSKGLPIVSKHEFLAPCSPS*MDRATS
Trigger: GGAAGTGGCTCTGTCCATCCAGGAGGGACTGCAGGG...TGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp TCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTGCCTTTCATTGATGAGGAATTaGAGCTGCAAGACAGCCGCA +
Preference number: 4 (lower is better)
Translates to: SWDFNRGSSLSVVQHLCLSLMRN*SCKTAA
Trigger: TGCGGCTGTCTTGCAGCTCCAATTCCTCATCAATGA...AAGGCAAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp AGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTATGTACAACTGGGCCTaGATGAGTCTTGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: RQIRPLSWDFNRGSSLSVMYNWA*MSLGGE
Trigger: CTCTCCACCAAGACTCATCCAGGCCCAGTTGTACAT...AACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp CATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTTTCCATGTGGGACTGTaGTTTGGAAAGGGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: HYLGILTGVPAFLLYSIFFHVGL*FGKGGL
Trigger: CAAGCCGCCCTTTCCAAACCACAGTCCCACATGGAA...AAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp CGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATTGGAGGGCTTGTTTCTaGCTCAGGAGTAATAATGTC +
Preference number: 4 (lower is better)
Translates to: RPLSWDFNRGSSLSVVQHWRACF*LRSNNV
Trigger: GACATTATTACTCCTGAGCCAGAAACAAGCCCTCCA...ATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp TCCATTCCACATGGGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGAGAGATCTGGAAATaGAGGGCTTGTTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SIPHGERQIRPLSWDFNRGEIWK*RACFWL
Trigger: GAGCCAGAAACAAGCCCTCCATTTCCAGATCTCTCC...CCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCCCATGTGGAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp CATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTTGCCTTTCTAAATGGTaGTCTTCCAGGACCCCAGCG +
Preference number: 4 (lower is better)
Translates to: HYLGILTGVPAFLLYSIFCLSKW*SSRTPA
Trigger: CGCTGGGGTCCTGGAAGACCACCATTTAGAAAGGCA...AAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp CAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACTGTGCCTTTCTAAATaGTGGTCTTCCAGGACCCCA +
Preference number: 4 (lower is better)
Translates to: QIRPLSWDFNRGSSLSVVLCLSK*WSSRTP
Trigger: TGGGGTCCTGGAAGACCACCATTTAGAAAGGCACAG...TACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp AGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGCAAGCTTTGTCATATaGCAGCCCGCCAGAGAATAT +
Preference number: 4 (lower is better)
Translates to: RQIRPLSWDFNRGSSLSVASFVI*QPAREY
Trigger: ATATTCTCTGGCGGGCTGTCATATGACAAAGCTTGC...AACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp TCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTGCCTTTGTGCATGTAACAGGTaGCTCATGAATGTCCATTGG +
Preference number: 4 (lower is better)
Translates to: SWDFNRGSSLSVVQHLCLCACNR*LMNVHW
Trigger: CCAATGGACATTCATGAGTCACCTGTTACATGCACA...AAGGCAAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp GGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTTGTGCATGTAACAGGTaGCTCATGAATGTCCATTGG +
Preference number: 4 (lower is better)
Translates to: GKDKFGHYLGILTGVPAFCACNR*LMNVHW
Trigger: CCAATGGACATTCATGAGTCACCTGTTACATGCACA...AAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp AGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTTCCAGAAAGACTCCTTaGAGGAGGAAGTTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: RQIRPLSWDFNRGSSLSVSRKTP*RRKLRG
Trigger: TCCTCTCAACTTCCTCCTTCAAGGAGTCTTTCTGGA...AACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp CGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCACTATTCCATATGCTaGGCTTATAGAAAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: RPLSWDFNRGSSLSVVQHHYSIC*AYRKAG
Trigger: ACCAGCCTTTCTATAAGCTCAGCATATGGAATAGTG...ATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp GGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCCAGCGATTTACTTTTaGAACGTCAGCACTGGAAAG +
Preference number: 4 (lower is better)
Translates to: GKDKFGHYLGILTGVPAFPAIYF*NVSTGK
Trigger: CTTTCCAGTGCTGACGTTTCAAAAGTAAATCGCTGG...AAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp GGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTTGGATCAAAGGCCAATaGTGTGGGCTGATAAGGAAA +
Preference number: 4 (lower is better)
Translates to: GKDKFGHYLGILTGVPAFWIKGQ*CGLIRK
Trigger: TTTCCTTATCAGCCCACAGCATTGGCCTTTGATCCA...AAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp TCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTGCCTTGGTGGAGAGTTCAATTaGCTTGTTCCACATGATGAC +
Preference number: 4 (lower is better)
Translates to: SWDFNRGSSLSVVQHLCLGGEFN*LVPHDD
Trigger: GTCATCATGTGGAACAAGGCAATTGAACTCTCCACC...AAGGCAAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp CATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTCCACAACCAGCCCAGTaGAGTTTCCAAATGCCACTA +
Preference number: 4 (lower is better)
Translates to: HYLGILTGVPAFLLYSIFPQPAQ*SFQMPL
Trigger: TAGTGGCATTTGGAAACTGCACTGGGCTGGTTGTGG...AAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp GGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTTGCCAGTTCTGTCCATaGAGGAAAATGTTAGCACTG +
Preference number: 4 (lower is better)
Translates to: GKDKFGHYLGILTGVPAFCQFCP*RKMLAL
Trigger: CAGTGCTAACATTTTCCTGCATGGACAGAACTGGCA...AAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp GGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTGTAAAGAAATCTCCATaGAAGCAGCTGACTGTGCCT +
Preference number: 4 (lower is better)
Translates to: GKDKFGHYLGILTGVPAFVKKSP*KQLTVP
Trigger: AGGCACAGTCAGCTGCTTGCATGGAGATTTCTTTAC...AAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp CATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTGGCCTGGATGAGTCTTaGTGGAGAGTTCAATTGCCT +
Preference number: 4 (lower is better)
Translates to: HYLGILTGVPAFLLYSIFGLDES*WRVQLP
Trigger: AGGCAATTGAACTCTCCACCAAGACTCATCCAGGCC...AAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp CATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTGGAGAGATCTGGAAATaGAGGGCTTGTTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: HYLGILTGVPAFLLYSIFGEIWK*RACFWL
Trigger: GAGCCAGAAACAAGCCCTCCATTTCCAGATCTCTCC...AAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp GGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTTTGAGAGGAGAGATCTaGAAATGGAGGGCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: GKDKFGHYLGILTGVPAFLRGEI*KWRACF
Trigger: GAAACAAGCCCTCCATTTCCAGATCTCTCCTCTCAA...AAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp TCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAAATGACATGCCAGAAGTCAGGCTTTCCTaGATTTCCTCTCTCGGAAGC +
Preference number: 4 (lower is better)
Translates to: SKGLPIVSKHEFLANDMPEVRLS*ISSLGS
Trigger: GCTTCCGAGAGAGGAAATTCAGGAAAGCCTGACTTC...TGGCATGTCATTTGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp AGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTCTCAGATTCCACAAATaGAGCGTGTCATCTGAACTC +
Preference number: 4 (lower is better)
Translates to: RQIRPLSWDFNRGSSLSVLRFHK*SVSSEL
Trigger: GAGTTCAGATGACACGCTTCATTTGTGGAATCTGAG...AACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp TCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAAATGACATGCCATCCAAGCTCCTCCACTaGCTGGCCATTCCTTATTAC +
Preference number: 4 (lower is better)
Translates to: SKGLPIVSKHEFLANDMPSKLLH*LAIPYY
Trigger: GTAATAAGGAATGGCCAGTCAGTGGAGGAGCTTGGA...TGGCATGTCATTTGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp TCCATTCCACATGGGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGTCTTCAACATCACACTaGAGTCGTACCTCTAGTGAC +
Preference number: 4 (lower is better)
Translates to: SIPHGERQIRPLSWDFNRSSTSH*SRTSSD
Trigger: GTCACTAGAGGTACGACTTCAGTGTGATGTTGAAGA...CCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCCCATGTGGAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp CAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTATCTTCAACATCACACTaGAGTCGTACCTCTAGTGAC +
Preference number: 4 (lower is better)
Translates to: QIRPLSWDFNRGSSLSVVSSTSH*SRTSSD
Trigger: GTCACTAGAGGTACGACTTCAGTGTGATGTTGAAGA...TACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp CAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACTTGAAGGAGGAAGTTaGGAGGAGAGATCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: QIRPLSWDFNRGSSLSVVLEGGS*EERSGN
Trigger: ATTTCCAGATCTCTCCTCTCAACTTCCTCCTTCAAG...TACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp TCCATTCCACATGGGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGCTGGTACAGGTCACTTaGTCTATAGAGGTCAATGGT +
Preference number: 4 (lower is better)
Translates to: SIPHGERQIRPLSWDFNRLVQVT*SIEVNG
Trigger: ACCATTGACCTCTATAGATCAAGTGACCTGTACCAG...CCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCCCATGTGGAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp TCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTGCCTTAAGACGAGTAGTTCATaGCCAATTTCCTTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SWDFNRGSSLSVVQHLCLKTSSS*PISFSR
Trigger: CCTGGAAAAGGAAATTGGTCATGAACTACTCGTCTT...AAGGCAAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp TCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAAATGACATGCCAGGTCTGGGAAGGCAGTaGGAAGACTTTGGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: SKGLPIVSKHEFLANDMPGLGRQ*EDFGLF
Trigger: AAACAAGCCAAAGTCTTCTCACTGCCTTCCCAGACC...TGGCATGTCATTTGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp TCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTGCCTTCTATATGTTAACCGTTaGATTTCAGTGGGAGAGACG +
Preference number: 4 (lower is better)
Translates to: SWDFNRGSSLSVVQHLCLLYVNR*ISVGET
Trigger: CGTCTCTCCCACTGAAATTCAACGGTTAACATATAG...AAGGCAAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp TGTACAGGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCGGATGCTTTTCCTGCTaGGGCTTCCCCGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: CTGNFKSKGLPIVSKHEFGCFSC*GFPEEF
Trigger: GAACTCTTCGGGGAAGCCTCAGCAGGAAAAGCATCC...GAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCCTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp AGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTCCAGCGATTTACTTTTaGAACGTCAGCACTGGAAAG +
Preference number: 4 (lower is better)
Translates to: RQIRPLSWDFNRGSSLSVPAIYF*NVSTGK
Trigger: CTTTCCAGTGCTGACGTTTCAAAAGTAAATCGCTGG...AACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp TCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAAATGACATGCCACTCCATGCAAGCAGCTaGCTGTGCCTTTCTAAATGG +
Preference number: 4 (lower is better)
Translates to: SKGLPIVSKHEFLANDMPLHASS*LCLSKW
Trigger: CCATTTAGAAAGGCACAGTCAGCTGCTTGCATGGAG...TGGCATGTCATTTGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp CATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTCTGAATAACAAGATCTaGTTGATAGCCCGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: HYLGILTGVPAFLLYSIFLNNKI*LIARRH
Trigger: ATGCCGCCGGGCTATCAAGCAGATCTTGTTATTCAG...AAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp CATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTACCACCACATCTGCTTaGAATATGAACGACGTCTCG +
Preference number: 4 (lower is better)
Translates to: HYLGILTGVPAFLLYSIFTTTSA*NMNDVS
Trigger: CGAGACGTCGTTCATATTGCAAGCAGATGTGGTGGT...AAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp GGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCACTTGGAAAACGCTTCTaGGCTGGTCATCATGCCCGC +
Preference number: 4 (lower is better)
Translates to: GNFKSKGLPIVSKHEFLALGKRF*AGHHAR
Trigger: GCGGGCATGATGACCAGCGCAGAAGCGTTTTCCAAG...TGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp TCCATTCCACATGGGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGAGAGGTTGGACTTGTaGAGTGTCCATTTACATGGT +
Preference number: 4 (lower is better)
Translates to: SIPHGERQIRPLSWDFNRERLDL*SVHLHG
Trigger: ACCATGTAAATGGACACTGCACAAGTCCAACCTCTC...CCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCCCATGTGGAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp TCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAAATGACATGCCAATGTACAACTGGGCCTaGATGAGTCTTGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SKGLPIVSKHEFLANDMPMYNWA*MSLGGE
Trigger: CTCTCCACCAAGACTCATCCAGGCCCAGTTGTACAT...TGGCATGTCATTTGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp TGTACAGGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTGTGGGACTGTGGTTTaGAAAGGGCGGCTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: CTGNFKSKGLPIVSKHEFCGTVV*KGRLGL
Trigger: AAGCCCAAGCCGCCCTTTCCAAACCACAGTCCCACA...GAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCCTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp GCTATTTTGATTCCTTTCAGTTGGGTAGGGCAAATACACTTAAAACGCATTGATTTCCATGTGGGACTGTaGTTTGGAAAGGGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: AILIPFSWVGQIHLKRIDFHVGL*FGKGGL
Trigger: CAAGCCGCCCTTTCCAAACCACAGTCCCACATGGAA...ATCAATGCGTTTTAAGTGTATTTGCCCTACCCAACTGAAAGGAATCAAAATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp AGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTAGCTCCTCCACTGACTaGCCATTCCTTATTACTGTA +
Preference number: 4 (lower is better)
Translates to: RQIRPLSWDFNRGSSLSVSSSTD*PFLITV
Trigger: TACAGTAATAAGGAATGGCCAGTCAGTGGAGGAGCT...AACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp TCCATTCCACATGGGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGTGGAGGGCTTGTTTCTaGCTCAGGAGTAATAATGTC +
Preference number: 4 (lower is better)
Translates to: SIPHGERQIRPLSWDFNRWRACF*LRSNNV
Trigger: GACATTATTACTCCTGAGCCAGAAACAAGCCCTCCA...CCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCCCATGTGGAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp TCCATTCCACATGGGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGTTGAGAGGAGAGATCTaGAAATGGAGGGCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: SIPHGERQIRPLSWDFNRLRGEI*KWRACF
Trigger: GAAACAAGCCCTCCATTTCCAGATCTCTCCTCTCAA...CCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCCCATGTGGAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp TCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTGCCTTAACTCAACAATAGGATaGTCCATCTCAAGCACTGTA +
Preference number: 4 (lower is better)
Translates to: SWDFNRGSSLSVVQHLCLNSTIG*SISSTV
Trigger: TACAGTGCTTGAGATGGATCATCCTATTGTTGAGTT...AAGGCAAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp TCCATTCCACATGGGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGTAACAGGTGACTCATaGATGTCCATTGGATATGGA +
Preference number: 4 (lower is better)
Translates to: SIPHGERQIRPLSWDFNRVTGDS*MSIGYG
Trigger: TCCATATCCAATGGACATTCATGAGTCACCTGTTAC...CCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCCCATGTGGAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp TCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTGCCTTCTGCAGTGTCATTGCTaGAGCATCCCAAAATTTTAT +
Preference number: 4 (lower is better)
Translates to: SWDFNRGSSLSVVQHLCLLQCHC*SIPKFY
Trigger: ATAAAATTTTGGGATGCTTCAGCAATGACACTGCAG...AAGGCAAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp TGTACAGGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCAGGCACTGTTGCACATaGCCACCACATCTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: CTGNFKSKGLPIVSKHEFRHCCT*PPHLLA
Trigger: TGCAAGCAGATGTGGTGGTCATGTGCAACAGTGCCT...GAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCCTGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp CATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTCACCAAATAGTCCCTTaGGAAAGCCTCTATTTTGGG +
Preference number: 4 (lower is better)
Translates to: HYLGILTGVPAFLLYSIFHQIVP*ESLYFG
Trigger: CCCAAAATAGAGGCTTTCTCAAGGGACTATTTGGTG...AAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp AGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTAAAAGTTGTCTGCAATaGACTGCCTGTTCTTTCGAG +
Preference number: 4 (lower is better)
Translates to: RQIRPLSWDFNRGSSLSVKSCLQ*TACSFE
Trigger: CTCGAAAGAACAGGCAGTTCATTGCAGACAACTTTT...AACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp TCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAAATGACATGCCATTCTGGATAAGTTTGTaGTCCGAGGTTCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: SKGLPIVSKHEFLANDMPFWISL*SEVPSS
Trigger: GGAGCTTGGAACCTCGGAGCACAAACTTATCCAGAA...TGGCATGTCATTTGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp TCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAAATGACATGCCACTGAATAACAAGATCTaGTTGATAGCCCGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: SKGLPIVSKHEFLANDMPLNNKI*LIARRH
Trigger: ATGCCGCCGGGCTATCAAGCAGATCTTGTTATTCAG...TGGCATGTCATTTGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp CATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTTGCCAGTTCTGTCCATaGAGGAAAATGTTAGCACTG +
Preference number: 4 (lower is better)
Translates to: HYLGILTGVPAFLLYSIFCQFCP*RKMLAL
Trigger: CAGTGCTAACATTTTCCTGCATGGACAGAACTGGCA...AAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp GCTATTTTGATTCCTTTCAGTTGGGTAGGGCAAATACACTTAAAACGCATTGATGGCCTGGATGAGTCTTaGTGGAGAGTTCAATTGCCT +
Preference number: 4 (lower is better)
Translates to: AILIPFSWVGQIHLKRIDGLDES*WRVQLP
Trigger: AGGCAATTGAACTCTCCACCAAGACTCATCCAGGCC...ATCAATGCGTTTTAAGTGTATTTGCCCTACCCAACTGAAAGGAATCAAAATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp CAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTATTGACTTTTTCCATGTaGGACTGTGGTTTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: QIRPLSWDFNRGSSLSVVLTFSM*DCGLER
Trigger: CCTTTCCAAACCACAGTCCCACATGGAAAAAGTCAA...TACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp TCCATTCCACATGGGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGTTGACTTTTTCCATGTaGGACTGTGGTTTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: SIPHGERQIRPLSWDFNRLTFSM*DCGLER
Trigger: CCTTTCCAAACCACAGTCCCACATGGAAAAAGTCAA...CCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCCCATGTGGAATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp TCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTGCCTTAAATATTCTGCTCTCTaGACACCAGTAGATCATCTG +
Preference number: 4 (lower is better)
Translates to: SWDFNRGSSLSVVQHLCLKYSAL*TPVDHL
Trigger: CAGATGATCTACTGGTGTCCAGAGAGCAGAATATTT...AAGGCAAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp TCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTGCCTTATCTATAGAGGTCAATaGTCCCCATGCTTAATAGCA +
Preference number: 4 (lower is better)
Translates to: SWDFNRGSSLSVVQHLCLIYRGQ*SPCLIA
Trigger: TGCTATTAAGCATGGGGACCATTGACCTCTATAGAT...AAGGCAAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp CGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATTTCATCTGTGTTGTTTaGATCTCTCCATACTTCGTA +
Preference number: 4 (lower is better)
Translates to: RPLSWDFNRGSSLSVVQHFICVV*ISPYFV
Trigger: TACGAAGTATGGAGAGATCCAAACAACACAGATGAA...ATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp TCCATTCCACATGGGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGCAGTGAGAAGACTTTaGCTTGTTTTTCTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: SIPHGERQIRPLSWDFNRAVRRL*LVFLSR
Trigger: TCTGCTCAGAAAAACAAGCCAAAGTCTTCTCACTGC...CCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCCCATGTGGAATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp AGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTAGAAAGCCTCTATTTTaGGCTTCTGGTGTCTCTATG +
Preference number: 4 (lower is better)
Translates to: RQIRPLSWDFNRGSSLSVRKPLF*ASGVSM
Trigger: CATAGAGACACCAGAAGCCCAAAATAGAGGCTTTCT...AACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp TGTACAGGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCAAAACGCTTCTGCGCTaGTCATCATGCCCGCAGTCT +
Preference number: 4 (lower is better)
Translates to: CTGNFKSKGLPIVSKHEFKTLLR*SSCPQS
Trigger: AGACTGCGGGCATGATGACCAGCGCAGAAGCGTTTT...GAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCCTGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp TCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAAATGACATGCCAGCAACTCTGAGAGGTTaGACTTGTGCAGTGTCCATT +
Preference number: 4 (lower is better)
Translates to: SKGLPIVSKHEFLANDMPATLRG*TCAVSI
Trigger: AATGGACACTGCACAAGTCCAACCTCTCAGAGTTGC...TGGCATGTCATTTGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp TCCATTCCACATGGGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGTTGAAACGTCAGCACTaGAAAGACGTTTTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: SIPHGERQIRPLSWDFNRLKRQH*KDVFQN
Trigger: GTTCTGGAAAACGTCTTTCCAGTGCTGACGTTTCAA...CCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCCCATGTGGAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
3UTR CAA 72 bp TATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTaGTACAGCATCTTTGCCTTTGATAAGTCTCCCTTA +
Preference number: 4 (lower is better)
Translates to: YLGILTGVPAFL*YSIFAFDKSPL
Trigger: TAAGGGAGACTTATCAAAGGCAAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp GGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAGAAGTCAGGCTTTCCTaGATTTCCTCTCTCGGAAGC +
Preference number: 4 (lower is better)
Translates to: GNFKSKGLPIVSKHEFLAEVRLS*ISSLGS
Trigger: GCTTCCGAGAGAGGAAATTCAGGAAAGCCTGACTTC...TGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp AGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTAATCTGGAAATAGTCTaGAGTCAGGCTTTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: RQIRPLSWDFNRGSSLSVNLEIV*SQAFLN
Trigger: ATTCAGGAAAGCCTGACTTCAGACTATTTCCAGATT...AACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp CAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTATTTCTTCCTTCTCTTTaGCTTTTTCCATGTGGGACT +
Preference number: 4 (lower is better)
Translates to: QIRPLSWDFNRGSSLSVVFLPSL*LFPCGT
Trigger: AGTCCCACATGGAAAAAGTCAAAGAGAAGGAAGAAA...TACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp AGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTAACTCAACAATAGGATaGTCCATCTCAAGCACTGTA +
Preference number: 4 (lower is better)
Translates to: RQIRPLSWDFNRGSSLSVNSTIG*SISSTV
Trigger: TACAGTGCTTGAGATGGATCATCCTATTGTTGAGTT...AACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp TCCATTCCACATGGGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGTCAGGTCAACTACGATaGGATCTTTCTCTAGAAGTA +
Preference number: 4 (lower is better)
Translates to: SIPHGERQIRPLSWDFNRSGQLR*DLSLEV
Trigger: TACTTCTAGAGAAAGATCTCATCGTAGTTGACCTGA...CCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCCCATGTGGAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp CAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACTGCAGTGTCATTGCTaGAGCATCCCAAAATTTTAT +
Preference number: 4 (lower is better)
Translates to: QIRPLSWDFNRGSSLSVVLQCHC*SIPKFY
Trigger: ATAAAATTTTGGGATGCTTCAGCAATGACACTGCAG...TACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp GGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCACACTGCTCCTTTCAGTaGGAGGAATGTACCACTTGG +
Preference number: 4 (lower is better)
Translates to: GNFKSKGLPIVSKHEFLAHCSFQ*EECTTW
Trigger: CCAAGTGGTACATTCCTCTCACTGAAAGGAGCAGTG...TGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp TCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAAATGACATGCCAGGTGGAGAGTTCAATTaGCTTGTTCCACATGATGAC +
Preference number: 4 (lower is better)
Translates to: SKGLPIVSKHEFLANDMPGGEFN*LVPHDD
Trigger: GTCATCATGTGGAACAAGGCAATTGAACTCTCCACC...TGGCATGTCATTTGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp TCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTGCCTTGTAATTGCTTTCCCATaGATGATGGTTAAACTTGGT +
Preference number: 4 (lower is better)
Translates to: SWDFNRGSSLSVVQHLCLVIAFP*MMVKLG
Trigger: ACCAAGTTTAACCATCATGCATGGGAAAGCAATTAC...AAGGCAAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp GGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTGTAATTGCTTTCCCATaGATGATGGTTAAACTTGGT +
Preference number: 4 (lower is better)
Translates to: GKDKFGHYLGILTGVPAFVIAFP*MMVKLG
Trigger: ACCAAGTTTAACCATCATGCATGGGAAAGCAATTAC...AAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp TCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAAATGACATGCCAGTAAAGAAATCTCCATaGAAGCAGCTGACTGTGCCT +
Preference number: 4 (lower is better)
Translates to: SKGLPIVSKHEFLANDMPVKKSP*KQLTVP
Trigger: AGGCACAGTCAGCTGCTTGCATGGAGATTTCTTTAC...TGGCATGTCATTTGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp CAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTAATCTATAGAGGTCAATaGTCCCCATGCTTAATAGCA +
Preference number: 4 (lower is better)
Translates to: QIRPLSWDFNRGSSLSVVIYRGQ*SPCLIA
Trigger: TGCTATTAAGCATGGGGACCATTGACCTCTATAGAT...TACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp CATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTACCGTTGAATTTCAGTaGGAGAGACGAGGTATAATG +
Preference number: 4 (lower is better)
Translates to: HYLGILTGVPAFLLYSIFTVEFQ*ERRGIM
Trigger: CATTATACCTCGTCTCTCCCACTGAAATTCAACGGT...AAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp GGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCACAGTGTCCATTTACATaGTCTGAGGTGGGGGACTTG +
Preference number: 4 (lower is better)
Translates to: GNFKSKGLPIVSKHEFLAQCPFT*SEVGDL
Trigger: CAAGTCCCCCACCTCAGACCATGTAAATGGACACTG...TGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp CATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTAATCTGGAAATAGTCTaGAGTCAGGCTTTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: HYLGILTGVPAFLLYSIFNLEIV*SQAFLN
Trigger: ATTCAGGAAAGCCTGACTTCAGACTATTTCCAGATT...AAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp CATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTTTTCTTCCTTCTCTTTaGCTTTTTCCATGTGGGACT +
Preference number: 4 (lower is better)
Translates to: HYLGILTGVPAFLLYSIFFLPSL*LFPCGT
Trigger: AGTCCCACATGGAAAAAGTCAAAGAGAAGGAAGAAA...AAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp GGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCATCCAGAAAGACTCCTTaGAGGAGGAAGTTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: GNFKSKGLPIVSKHEFLASRKTP*RRKLRG
Trigger: TCCTCTCAACTTCCTCCTTCAAGGAGTCTTTCTGGA...TGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp TGTACAGGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCCTGTTAAGCCTGCAATaGACTGCCTGTTCTTTCGAG +
Preference number: 4 (lower is better)
Translates to: CTGNFKSKGLPIVSKHEFLLSLQ*TACSFE
Trigger: CTCGAAAGAACAGGCAGTTCATTGCAGGCTTAACAG...GAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCCTGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114782.8
CDS-3UTR TCA 90 bp TCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAAATGACATGCCACTATATGTTAACCGTTaGATTTCAGTGGGAGAGACG +
Preference number: 4 (lower is better)
Translates to: SKGLPIVSKHEFLANDMPLYVNR*ISVGET
Trigger: CGTCTCTCCCACTGAAATTCAACGGTTAACATATAG...TGGCATGTCATTTGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp TCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAAATGACATGCCACATGCCGAACTGTCTTaGAAATCTGGAAATAGTCTG +
Preference number: 4 (lower is better)
Translates to: SKGLPIVSKHEFLANDMPHAELS*KSGNSL
Trigger: CAGACTATTTCCAGATTTGCAAGACAGTTCGGCATG...TGGCATGTCATTTGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp GCTATTTTGATTCCTTTCAGTTGGGTAGGGCAAATACACTTAAAACGCATTGATTGGATCAAAGGCCAATaGTGTGGGCTGATAAGGAAA +
Preference number: 4 (lower is better)
Translates to: AILIPFSWVGQIHLKRIDWIKGQ*CGLIRK
Trigger: TTTCCTTATCAGCCCACAGCATTGGCCTTTGATCCA...ATCAATGCGTTTTAAGTGTATTTGCCCTACCCAACTGAAAGGAATCAAAATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp CAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTAAGAGTCATTTTTCCGTaGAAAGGATTCCATGAAGTA +
Preference number: 4 (lower is better)
Translates to: QIRPLSWDFNRGSSLSVVRVIFP*KGFHEV
Trigger: TACTTCATGGAATCCTTTGCACGGAAAAATGACTCT...TACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp TCCATTCCACATGGGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGAGAGTCATTTTTCCGTaGAAAGGATTCCATGAAGTA +
Preference number: 4 (lower is better)
Translates to: SIPHGERQIRPLSWDFNRRVIFP*KGFHEV
Trigger: TACTTCATGGAATCCTTTGCACGGAAAAATGACTCT...CCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCCCATGTGGAATGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp GCTATTTTGATTCCTTTCAGTTGGGTAGGGCAAATACACTTAAAACGCATTGATGAGAGGTTGGACTTGTaGAGTGTCCATTTACATGGT +
Preference number: 4 (lower is better)
Translates to: AILIPFSWVGQIHLKRIDERLDL*SVHLHG
Trigger: ACCATGTAAATGGACACTGCACAAGTCCAACCTCTC...ATCAATGCGTTTTAAGTGTATTTGCCCTACCCAACTGAAAGGAATCAAAATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp GGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAGACGTTTTCCAGAACTaGAACTCTGAGAGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: GNFKSKGLPIVSKHEFLADVFQN*NSERLD
Trigger: GTCCAACCTCTCAGAGTTGCAGTTCTGGAAAACGTC...TGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp TGTACAGGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCGACGTTTTCCAGAACTaGAACTCTGAGAGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: CTGNFKSKGLPIVSKHEFDVFQN*NSERLD
Trigger: GTCCAACCTCTCAGAGTTGCAGTTCTGGAAAACGTC...GAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCCTGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp TCCATTCCACATGGGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGTTAAATTTAAGAGAATaGAGAATGGCCGGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: SIPHGERQIRPLSWDFNRLNLRE*RMAGLF
Trigger: GAAAAGGCCGGCCATTCTCCATTCTCTTAAATTTAA...CCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCCCATGTGGAATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp AGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTTTAAATTTAAGAGAATaGAGAATGGCCGGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: RQIRPLSWDFNRGSSLSVLNLRE*RMAGLF
Trigger: GAAAAGGCCGGCCATTCTCCATTCTCTTAAATTTAA...AACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp GCTATTTTGATTCCTTTCAGTTGGGTAGGGCAAATACACTTAAAACGCATTGATCTGGATGAGTCTTGGTaGAGAGTTCAATTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: AILIPFSWVGQIHLKRIDLDESW*RVQLPC
Trigger: ACAAGGCAATTGAACTCTCCACCAAGACTCATCCAG...ATCAATGCGTTTTAAGTGTATTTGCCCTACCCAACTGAAAGGAATCAAAATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp TCCATTCCACATGGGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGTTCATCTGTGTTGTTTaGATCTCTCCATACTTCGTA +
Preference number: 4 (lower is better)
Translates to: SIPHGERQIRPLSWDFNRFICVV*ISPYFV
Trigger: TACGAAGTATGGAGAGATCCAAACAACACAGATGAA...CCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCCCATGTGGAATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp GGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAGCAACTCTGAGAGGTTaGACTTGTGCAGTGTCCATT +
Preference number: 4 (lower is better)
Translates to: GNFKSKGLPIVSKHEFLAATLRG*TCAVSI
Trigger: AATGGACACTGCACAAGTCCAACCTCTCAGAGTTGC...TGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp GCTATTTTGATTCCTTTCAGTTGGGTAGGGCAAATACACTTAAAACGCATTGATCACTATTCCATATGCTaGGCTTATAGAAAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: AILIPFSWVGQIHLKRIDHYSIC*AYRKAG
Trigger: ACCAGCCTTTCTATAAGCTCAGCATATGGAATAGTG...ATCAATGCGTTTTAAGTGTATTTGCCCTACCCAACTGAAAGGAATCAAAATAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp GGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCACACCAAATAGTCCCTTaGGAAAGCCTCTATTTTGGG +
Preference number: 4 (lower is better)
Translates to: GNFKSKGLPIVSKHEFLAHQIVP*ESLYFG
Trigger: CCCAAAATAGAGGCTTTCTCAAGGGACTATTTGGTG...TGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp TCCATTCCACATGGGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGATAAATTATGACATATaGAGAGACTCCAGAGACACA +
Preference number: 4 (lower is better)
Translates to: SIPHGERQIRPLSWDFNRINYDI*RDSRDT
Trigger: TGTGTCTCTGGAGTCTCTGCATATGTCATAATTTAT...CCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCCCATGTGGAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp TGTACAGGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCGGTCAATGGTCCCCATaGTTAATAGCACTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: CTGNFKSKGLPIVSKHEFGQWSP*LIALSS
Trigger: AGAAGACAGTGCTATTAAGCATGGGGACCATTGACC...GAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCCTGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp GGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCATTGTCTGCAATGAACTaGCTGTTCTTTCGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: GNFKSKGLPIVSKHEFLALSAMN*LFFRGD
Trigger: GTCTCCTCGAAAGAACAGGCAGTTCATTGCAGACAA...TGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp TGTACAGGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCCTGGATGAGTCTTGGTaGAGAGTTCAATTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: CTGNFKSKGLPIVSKHEFLDESW*RVQLPC
Trigger: ACAAGGCAATTGAACTCTCCACCAAGACTCATCCAG...GAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCCTGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp CAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTATCTCATGTCTGTCAGTaGCAAATAATTAACATCCAA +
Preference number: 4 (lower is better)
Translates to: QIRPLSWDFNRGSSLSVVSHVCQ*QIINIQ
Trigger: TTGGATGTTAATTATTTGCCACTGACAGACATGAGA...TACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp GCTATTTTGATTCCTTTCAGTTGGGTAGGGCAAATACACTTAAAACGCATTGATACCGTTGAATTTCAGTaGGAGAGACGAGGTATAATG +
Preference number: 4 (lower is better)
Translates to: AILIPFSWVGQIHLKRIDTVEFQ*ERRGIM
Trigger: CATTATACCTCGTCTCTCCCACTGAAATTCAACGGT...ATCAATGCGTTTTAAGTGTATTTGCCCTACCCAACTGAAAGGAATCAAAATAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp GGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAGTAACAGGTGACTCATaGATGTCCATTGGATATGGA +
Preference number: 4 (lower is better)
Translates to: GNFKSKGLPIVSKHEFLAVTGDS*MSIGYG
Trigger: TCCATATCCAATGGACATTCATGAGTCACCTGTTAC...TGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp TGTACAGGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCCATGCCGAACTGTCTTaGAAATCTGGAAATAGTCTG +
Preference number: 4 (lower is better)
Translates to: CTGNFKSKGLPIVSKHEFHAELS*KSGNSL
Trigger: CAGACTATTTCCAGATTTGCAAGACAGTTCGGCATG...GAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCCTGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp TCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAAATGACATGCCAAAAACAAAATGTCCGTaGTATTCTCATGTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: SKGLPIVSKHEFLANDMPKTKCP*YSHVCQ
Trigger: CTGACAGACATGAGAATAGCACGGACATTTTGTTTT...TGGCATGTCATTTGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp GGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAAGAAAGCCTCTATTTTaGGCTTCTGGTGTCTCTATG +
Preference number: 4 (lower is better)
Translates to: GNFKSKGLPIVSKHEFLARKPLF*ASGVSM
Trigger: CATAGAGACACCAGAAGCCCAAAATAGAGGCTTTCT...TGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp GGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCATTGAAACGTCAGCACTaGAAAGACGTTTTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: GNFKSKGLPIVSKHEFLALKRQH*KDVFQN
Trigger: GTTCTGGAAAACGTCTTTCCAGTGCTGACGTTTCAA...TGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp GGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCATCAGGTCAACTACGATaGGATCTTTCTCTAGAAGTA +
Preference number: 4 (lower is better)
Translates to: GNFKSKGLPIVSKHEFLASGQLR*DLSLEV
Trigger: TACTTCTAGAGAAAGATCTCATCGTAGTTGACCTGA...TGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp GCTATTTTGATTCCTTTCAGTTGGGTAGGGCAAATACACTTAAAACGCATTGATTCGCCTAACATGTCCTaGATATTATCACACATTTCT +
Preference number: 4 (lower is better)
Translates to: AILIPFSWVGQIHLKRIDSPNMS*ILSHIS
Trigger: AGAAATGTGTGATAATATTCAGGACATGTTAGGCGA...ATCAATGCGTTTTAAGTGTATTTGCCCTACCCAACTGAAAGGAATCAAAATAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp TCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAAATGACATGCCAAGAGAATATTATAAATaGTTCACTGTTCCTGCACGT +
Preference number: 4 (lower is better)
Translates to: SKGLPIVSKHEFLANDMPREYYK*FTVPAR
Trigger: ACGTGCAGGAACAGTGAACCATTTATAATATTCTCT...TGGCATGTCATTTGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp TCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAAATGACATGCCACAAAGATTGGAAAATTaGTTTGTGTCAGGTCAACTA +
Preference number: 4 (lower is better)
Translates to: SKGLPIVSKHEFLANDMPQRLEN*FVSGQL
Trigger: TAGTTGACCTGACACAAACCAATTTTCCAATCTTTG...TGGCATGTCATTTGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp GGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAAAATATTCTGCTCTCTaGACACCAGTAGATCATCTG +
Preference number: 4 (lower is better)
Translates to: GNFKSKGLPIVSKHEFLAKYSAL*TPVDHL
Trigger: CAGATGATCTACTGGTGTCCAGAGAGCAGAATATTT...TGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp GGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCATTTGGCTTGTTTTTCTaGGCAGATTATCGTATACTG +
Preference number: 4 (lower is better)
Translates to: GNFKSKGLPIVSKHEFLAFGLFF*ADYRIL
Trigger: CAGTATACGATAATCTGCTCAGAAAAACAAGCCAAA...TGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR TCA 90 bp TGTACAGGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTCGCCTAACATGTCCTaGATATTATCACACATTTCT +
Preference number: 4 (lower is better)
Translates to: CTGNFKSKGLPIVSKHEFSPNMS*ILSHIS
Trigger: AGAAATGTGTGATAATATTCAGGACATGTTAGGCGA...GAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCCTGTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp GGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAATGGTTCACTGTTCCTaGACGTTTTGTATTCTACTT +
Preference number: 4 (lower is better)
Translates to: GNFKSKGLPIVSKHEFLAMVHCS*TFCILL
Trigger: AAGTAGAATACAAAACGTGCAGGAACAGTGAACCAT...TGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp GGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAAAAACAAAATGTCCGTaGTATTCTCATGTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: GNFKSKGLPIVSKHEFLAKTKCP*YSHVCQ
Trigger: CTGACAGACATGAGAATAGCACGGACATTTTGTTTT...TGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp GCTATTTTGATTCCTTTCAGTTGGGTAGGGCAAATACACTTAAAACGCATTGATCAAAGATTGGAAAATTaGTTTGTGTCAGGTCAACTA +
Preference number: 4 (lower is better)
Translates to: AILIPFSWVGQIHLKRIDQRLEN*FVSGQL
Trigger: TAGTTGACCTGACACAAACCAATTTTCCAATCTTTG...ATCAATGCGTTTTAAGTGTATTTGCCCTACCCAACTGAAAGGAATCAAAATAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp GCTATTTTGATTCCTTTCAGTTGGGTAGGGCAAATACACTTAAAACGCATTGATTCTCATGTCTGTCAGTaGCAAATAATTAACATCCAA +
Preference number: 4 (lower is better)
Translates to: AILIPFSWVGQIHLKRIDSHVCQ*QIINIQ
Trigger: TTGGATGTTAATTATTTGCCACTGACAGACATGAGA...ATCAATGCGTTTTAAGTGTATTTGCCCTACCCAACTGAAAGGAATCAAAATAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114787.8
CDS-3UTR GCA 90 bp TGTACAGGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCATAAATTATGACATATaGAGAGACTCCAGAGACACA +
Preference number: 4 (lower is better)
Translates to: CTGNFKSKGLPIVSKHEFINYDI*RDSRDT
Trigger: TGTGTCTCTGGAGTCTCTGCATATGTCATAATTTAT...GAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCCTGTACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CCA 90 bp GGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAAGAGAATATTATAAATaGTTCACTGTTCCTGCACGT +
Preference number: 4 (lower is better)
Translates to: GNFKSKGLPIVSKHEFLAREYYK*FTVPAR
Trigger: ACGTGCAGGAACAGTGAACCATTTATAATATTCTCT...TGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS GCA 90 bp CTGGTCATCATGCCCGCAGTCTTCTCTTCCAGCTCGCCCAGACGCTaGCCTCTCTCATCAAGTGCAATCCGGGCTCGGGTCAGCTCTCCC +
Preference number: 5 (lower is better)
Translates to: LVIMPAVFSSSSPRR*PLSSSAIRARVSSP
Trigger: GGGAGAGCTGACCCGAGCCCGGATTGCACTTGATGAGAGAGGGCAGCGTCTGGGCGAGCTGGAAGAGAAGACTGCGGGCATGATGACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS GCA 90 bp TCCCTCCTGGATGGACAGAGCCACTTCCAGCCCCACCACTGTTACTaGCACTGCTGCTACCACTGCCAGGGGAAGAGGCAGTTAAGCCAT +
Preference number: 5 (lower is better)
Translates to: SLLDGQSHFQPHHCY*HCCYHCQGKRQLSH
Trigger: ATGGCTTAACTGCCTCTTCCCCTGGCAGTGGTAGCAGCAGTGGCAGTAACAGTGGTGGGGCTGGAAGTGGCTCTGTCCATCCAGGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000114775.8
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS GCA 90 bp CCAGCAGCACCTTTCATCCCTTCTATACTACCTGGCCCAGGGATGTaGTGTGCGAGGCTTCGGGATGCTTTTCCTGCTGAGGCTTCCCCG +
Preference number: 5 (lower is better)
Translates to: PAAPFIPSILPGPGM*CARLRDAFPAEASP
Trigger: CGGGGAAGCCTCAGCAGGAAAAGCATCCCGAAGCCTCGCACAGCACATCCCTGGGCCAGGTAGTATAGAAGGGATGAAAGGTGCTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS CCA 90 bp TCCCATCACCCCGCCAGCAGCACCTTTCATCCCTTCTATACTACCTaGCCCAGGGATGTGCTGTGCGAGGCTTCGGGATGCTTTTCCTGC +
Preference number: 5 (lower is better)
Translates to: SHHPASSTFHPFYTT*PRDVLCEASGCFSC
Trigger: GCAGGAAAAGCATCCCGAAGCCTCGCACAGCACATCCCTGGGCCAGGTAGTATAGAAGGGATGAAAGGTGCTGCTGGCGGGGTGATGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS GCA 90 bp TTAGCTCATGTGCGTGCTTGGAAAACGCTTCTGCGCTGGTCATCATaGCCGCAGTCTTCTCTTCCAGCTCGCCCAGACGCTGCCCTCTCT +
Preference number: 5 (lower is better)
Translates to: LAHVRAWKTLLRWSS*PQSSLPARPDAALS
Trigger: AGAGAGGGCAGCGTCTGGGCGAGCTGGAAGAGAAGACTGCGGGCATGATGACCAGCGCAGAAGCGTTTTCCAAGCACGCACATGAGCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS GCA 90 bp CTGGATGGACAGAGCCACTTCCAGCCCCACCACTGTTACTGCCACTaGTGCTACCACTGCCAGGGGAAGAGGCAGTTAAGCCATCCAAAA +
Preference number: 5 (lower is better)
Translates to: LDGQSHFQPHHCYCH*CYHCQGKRQLSHPK
Trigger: TTTTGGATGGCTTAACTGCCTCTTCCCCTGGCAGTGGTAGCAGCAGTGGCAGTAACAGTGGTGGGGCTGGAAGTGGCTCTGTCCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000114775.8
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS CCA 90 bp ACTTCAGCATTAGCTCATGTGCGTGCTTGGAAAACGCTTCTGCGCTaGTCATCATGCCCGCAGTCTTCTCTTCCAGCTCGCCCAGACGCT +
Preference number: 5 (lower is better)
Translates to: TSALAHVRAWKTLLR*SSCPQSSLPARPDA
Trigger: AGCGTCTGGGCGAGCTGGAAGAGAAGACTGCGGGCATGATGACCAGCGCAGAAGCGTTTTCCAAGCACGCACATGAGCTAATGCTGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS TCA 90 bp GGCCGGCCTTTTCTGTCTCAGATTCCACAAATGAAGCGTGTCATCTaGACTCGCACTGACCAACGCGCCCTCATTGATGAGGAATTGGAG +
Preference number: 5 (lower is better)
Translates to: GRPFLSQIPQMKRVI*TRTDQRALIDEELE
Trigger: CTCCAATTCCTCATCAATGAGGGCGCGTTGGTCAGTGCGAGTTCAGATGACACGCTTCATTTGTGGAATCTGAGACAGAAAAGGCCGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000114775.8
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS TCA 90 bp AGAGAATGGAGAATGGCCGGCCTTTTCTGTCTCAGATTCCACAAATaGAGCGTGTCATCTGAACTCGCACTGACCAACGCGCCCTCATTG +
Preference number: 5 (lower is better)
Translates to: REWRMAGLFCLRFHK*SVSSELALTNAPSL
Trigger: CAATGAGGGCGCGTTGGTCAGTGCGAGTTCAGATGACACGCTTCATTTGTGGAATCTGAGACAGAAAAGGCCGGCCATTCTCCATTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000114775.8
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS GCA 90 bp TGGAAAGACGTTTTCCAGAACTGCAACTCTGAGAGGTTGGACTTGTaGAGTGTCCATTTACATGGTCTGAGGTGGGGGACTTGCAGCGCT +
Preference number: 5 (lower is better)
Translates to: WKDVFQNCNSERLDL*SVHLHGLRWGTCSA
Trigger: AGCGCTGCAAGTCCCCCACCTCAGACCATGTAAATGGACACTGCACAAGTCCAACCTCTCAGAGTTGCAGTTCTGGAAAACGTCTTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS CCA 90 bp CAACTGAATAACAAGATCTGCTTGATAGCCCGGCGGCATTCGTACTaGCCGTGTTTTAACACTGAGGCACGGGATGCTGTCCTTTGTCAC +
Preference number: 5 (lower is better)
Translates to: QLNNKICLIARRHSY*PCFNTEARDAVLCH
Trigger: GTGACAAAGGACAGCATCCCGTGCCTCAGTGTTAAAACACGGCCAGTACGAATGCCGCCGGGCTATCAAGCAGATCTTGTTATTCAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp TCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTGCCTTTCTGAGGTGGGGGACTaGCAGCGCTCAAGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: SWDFNRGSSLSVVQHLCLSEVGD*QRSSSR
Trigger: CCTGGAACTTGAGCGCTGCAAGTCCCCCACCTCAGA...AAGGCAAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp CGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATGCCAGGCAGGCACTGTaGCACATGACCACCACATCT +
Preference number: 5 (lower is better)
Translates to: RPLSWDFNRGSSLSVVQHARQAL*HMTTTS
Trigger: AGATGTGGTGGTCATGTGCAACAGTGCCTGCCTGGC...ATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp AGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTTCTGAGGTGGGGGACTaGCAGCGCTCAAGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: RQIRPLSWDFNRGSSLSVSEVGD*QRSSSR
Trigger: CCTGGAACTTGAGCGCTGCAAGTCCCCCACCTCAGA...AACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS GCA 90 bp ACAAAAGCAGGCCAGGCAGGCACTGTTGCACATGACCACCACATCTaGTTGCAATATGAACGACGTCTCGGTGATGTTGTGAACATAAAG +
Preference number: 5 (lower is better)
Translates to: TKAGQAGTVAHDHHI*LQYERRLGDVVNIK
Trigger: CTTTATGTTCACAACATCACCGAGACGTCGTTCATATTGCAAGCAGATGTGGTGGTCATGTGCAACAGTGCCTGCCTGGCCTGCTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp AGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTATGTGGGACTGTGGTTaGGAAAGGGCGGCTTGGGCT +
Preference number: 5 (lower is better)
Translates to: RQIRPLSWDFNRGSSLSVMWDCG*ERAAWA
Trigger: AGCCCAAGCCGCCCTTTCCAAACCACAGTCCCACAT...AACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp AGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGCCAGGCAGGCACTGTaGCACATGACCACCACATCT +
Preference number: 5 (lower is better)
Translates to: RQIRPLSWDFNRGSSLSVARQAL*HMTTTS
Trigger: AGATGTGGTGGTCATGTGCAACAGTGCCTGCCTGGC...AACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp TCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTGCCTTAGTTCACACGTCTGTTaGCCTTCTCCTGCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: SWDFNRGSSLSVVQHLCLSSHVC*PSPAFC
Trigger: GCAGAAGGCAGGAGAAGGCAAACAGACGTGTGAACT...AAGGCAAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS TCA 90 bp ATAAGGAAACCCATGCCGAACTGTCTTGCAAATCTGGAAATAGTCTaGAGTCAGGCTTTCCTGAATTTCCTCTCTCGGAAGCCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: IRKPMPNCLANLEIV*SQAFLNFLSRKPCS
Trigger: ACTGCAGGGCTTCCGAGAGAGGAAATTCAGGAAAGCCTGACTTCAGACTATTTCCAGATTTGCAAGACAGTTCGGCATGGGTTTCCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000114775.8
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS TCA 90 bp CACTCCTTCACTAGACACAGTATTAGTGCTTCCAGAAAGACTCCTTaGAGGAGGAAGTTGAGAGGAGAGATCTGGAAATGGAGGGCTTGT +
Preference number: 5 (lower is better)
Translates to: HSFTRHSISASRKTP*RRKLRGEIWKWRAC
Trigger: ACAAGCCCTCCATTTCCAGATCTCTCCTCTCAACTTCCTCCTTCAAGGAGTCTTTCTGGAAGCACTAATACTGTGTCTAGTGAAGGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS TCA 90 bp TTTGAAACGTCAGCACTGGAAAGACGTTTTCCAGAACTGCAACTCTaGGAGGTTGGACTTGTGCAGTGTCCATTTACATGGTCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: FETSALERRFPELQL*EVGLVQCPFTWSEV
Trigger: CACCTCAGACCATGTAAATGGACACTGCACAAGTCCAACCTCTCAGAGTTGCAGTTCTGGAAAACGTCTTTCCAGTGCTGACGTTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp CAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTAGGTCTTCTGCAAGCTTaGTCATATGACAGCCCGCCA +
Preference number: 5 (lower is better)
Translates to: QIRPLSWDFNRGSSLSVVGLLQA*SYDSPP
Trigger: TGGCGGGCTGTCATATGACAAAGCTTGCAGAAGACC...TACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp AGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTAGTTCACACGTCTGTTaGCCTTCTCCTGCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: RQIRPLSWDFNRGSSLSVSSHVC*PSPAFC
Trigger: GCAGAAGGCAGGAGAAGGCAAACAGACGTGTGAACT...AACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp GGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTAGAAAGGCTGGTAATTaGCTGAGGAGGCTCACCATC +
Preference number: 5 (lower is better)
Translates to: GKDKFGHYLGILTGVPAFRKAGN*LRRLTI
Trigger: GATGGTGAGCCTCCTCAGCAAATTACCAGCCTTTCT...AAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp CGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATGGCAGTGAGAAGACTTaGGCTTGTTTTTCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: RPLSWDFNRGSSLSVVQHGSEKT*ACFSEQ
Trigger: CTGCTCAGAAAAACAAGCCAAAGTCTTCTCACTGCC...ATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp TCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTGCCTTGACCACCACATCTGCTaGCAATATGAACGACGTCTC +
Preference number: 5 (lower is better)
Translates to: SWDFNRGSSLSVVQHLCLDHHIC*QYERRL
Trigger: GAGACGTCGTTCATATTGCAAGCAGATGTGGTGGTC...AAGGCAAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp GGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTTGCAACTCTGAGAGGTaGGACTTGTGCAGTGTCCAT +
Preference number: 5 (lower is better)
Translates to: GKDKFGHYLGILTGVPAFCNSER*DLCSVH
Trigger: ATGGACACTGCACAAGTCCAACCTCTCAGAGTTGCA...AAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp TCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTGCCTTTGCAACTCTGAGAGGTaGGACTTGTGCAGTGTCCAT +
Preference number: 5 (lower is better)
Translates to: SWDFNRGSSLSVVQHLCLCNSER*DLCSVH
Trigger: ATGGACACTGCACAAGTCCAACCTCTCAGAGTTGCA...AAGGCAAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS TCA 90 bp TATAGAGGTCAATGGTCCCCATGCTTAATAGCACTGTCTTCTGTATaGAATCCACCACAACCAGCCCAGTGCAGTTTCCAAATGCCACTA +
Preference number: 5 (lower is better)
Translates to: YRGQWSPCLIALSSV*NPPQPAQCSFQMPL
Trigger: TAGTGGCATTTGGAAACTGCACTGGGCTGGTTGTGGTGGATTTCATACAGAAGACAGTGCTATTAAGCATGGGGACCATTGACCTCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS GCA 90 bp TCCATACTTCGTATGGAGGCTGCATTAAACTGCCAGTTCTGTCCATaGAGGAAAATGTTAGCACTGCTCCTTTCAGTGAGAGGAATGTAC +
Preference number: 5 (lower is better)
Translates to: SILRMEAALNCQFCP*RKMLALLLSVRGMY
Trigger: GTACATTCCTCTCACTGAAAGGAGCAGTGCTAACATTTTCCTGCATGGACAGAACTGGCAGTTTAATGCAGCCTCCATACGAAGTATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS CCA 90 bp AGGAGGAAGTTGAGAGGAGAGATCTGGAAATGGAGGGCTTGTTTCTaGCTCAGGAGTAATAATGTCTTCAACATCACACTGAAGTCGTAC +
Preference number: 5 (lower is better)
Translates to: RRKLRGEIWKWRACF*LRSNNVFNITLKSY
Trigger: GTACGACTTCAGTGTGATGTTGAAGACATTATTACTCCTGAGCCAGAAACAAGCCCTCCATTTCCAGATCTCTCCTCTCAACTTCCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS CCA 90 bp GTCTGTCCACTTCCACCAAATAGTCCCTTGAGAAAGCCTCTATTTTaGGCTTCTGGTGTCTCTATGGGAGTAAACAAATCGCCTAACATG +
Preference number: 5 (lower is better)
Translates to: VCPLPPNSPLRKPLF*ASGVSMGVNKSPNM
Trigger: CATGTTAGGCGATTTGTTTACTCCCATAGAGACACCAGAAGCCCAAAATAGAGGCTTTCTCAAGGGACTATTTGGTGGAAGTGGACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp TCCATTCCACATGGGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGCGCACCACTTTCATGTaGGCAGTAACAGTCAACACC +
Preference number: 5 (lower is better)
Translates to: SIPHGERQIRPLSWDFNRRTTFM*AVTVNT
Trigger: GGTGTTGACTGTTACTGCCAACATGAAAGTGGTGCG...CCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCCCATGTGGAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp GGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTAATTTCTGGATAAGTTaGTGCTCCGAGGTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: GKDKFGHYLGILTGVPAFNFWIS*CSEVPS
Trigger: GCTTGGAACCTCGGAGCACAAACTTATCCAGAAATT...AAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp GGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCCCAGCGATTTACTTTaGAAACGTCAGCACTGGAAA +
Preference number: 5 (lower is better)
Translates to: GKDKFGHYLGILTGVPAFPSDLL*KRQHWK
Trigger: TTTCCAGTGCTGACGTTTCAAAAGTAAATCGCTGGG...AAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS GCA 90 bp TGTTCCATCAGCATGACCAGTAATAATAATTTCTGGATAAGTTTGTaGTCCGAGGTTCCAAGCTCCTCCACTGACTGGCCATTCCTTATT +
Preference number: 5 (lower is better)
Translates to: CSISMTSNNNFWISL*SEVPSSSTDWPFLI
Trigger: AATAAGGAATGGCCAGTCAGTGGAGGAGCTTGGAACCTCGGAGCACAAACTTATCCAGAAATTATTATTACTGGTCATGCTGATGGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS GCA 90 bp TCTGCACAGCAAAGGGATCTTCCTCTACAAGTTCACACGTCTGTTTaGCTTCTCCTGCCTTCTGCTTTTCAAACACTTTGGAAGTTTTTA +
Preference number: 5 (lower is better)
Translates to: SAQQRDLPLQVHTSV*LLLPSAFQTLWKFL
Trigger: TAAAAACTTCCAAAGTGTTTGAAAAGCAGAAGGCAGGAGAAGGCAAACAGACGTGTGAACTTGTAGAGGAAGATCCCTTTGCTGTGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS CCA 90 bp CACACGTCTGTTTGCCTTCTCCTGCCTTCTGCTTTTCAAACACTTTaGAAGTTTTTAGCTTGTACAACATCTGCAGTGTCATTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: HTSVCLLLPSAFQTL*KFLACTTSAVSLLK
Trigger: CTTCAGCAATGACACTGCAGATGTTGTACAAGCTAAAAACTTCCAAAGTGTTTGAAAAGCAGAAGGCAGGAGAAGGCAAACAGACGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp TCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAAATGACATGCCACGCACCACTTTCATGTaGGCAGTAACAGTCAACACC +
Preference number: 5 (lower is better)
Translates to: SKGLPIVSKHEFLANDMPRTTFM*AVTVNT
Trigger: GGTGTTGACTGTTACTGCCAACATGAAAGTGGTGCG...TGGCATGTCATTTGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp CGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATTTGGAAGTTTTTAGCTaGTACAACATCTGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: RPLSWDFNRGSSLSVVQHLEVFS*YNICSV
Trigger: GACACTGCAGATGTTGTACAAGCTAAAAACTTCCAA...ATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp CATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTTTCCAGAAAGACTCCTaGAAGGAGGAAGTTGAGAGG +
Preference number: 5 (lower is better)
Translates to: HYLGILTGVPAFLLYSIFFQKDS*KEEVER
Trigger: CCTCTCAACTTCCTCCTTCAAGGAGTCTTTCTGGAA...AAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp CAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTATCTGAGAGGTTGGACTaGTGCAGTGTCCATTTACAT +
Preference number: 5 (lower is better)
Translates to: QIRPLSWDFNRGSSLSVVSERLD*CSVHLH
Trigger: ATGTAAATGGACACTGCACAAGTCCAACCTCTCAGA...TACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS TCA 90 bp GGGCTTGTTTCTGGCTCAGGAGTAATAATGTCTTCAACATCACACTaGAGTCGTACCTCTAGTGACACTATTTCTGTTGTGACTTCATGT +
Preference number: 5 (lower is better)
Translates to: GLVSGSGVIMSSTSH*SRTSSDTISVVTSC
Trigger: ACATGAAGTCACAACAGAAATAGTGTCACTAGAGGTACGACTTCAGTGTGATGTTGAAGACATTATTACTCCTGAGCCAGAAACAAGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS GCA 90 bp TTTTCATCTGTGTTGTTTGGATCTCTCCATACTTCGTATGGAGGCTaGATTAAACTGCCAGTTCTGTCCATGCAGGAAAATGTTAGCACT +
Preference number: 5 (lower is better)
Translates to: FSSVLFGSLHTSYGG*IKLPVLSMQENVST
Trigger: AGTGCTAACATTTTCCTGCATGGACAGAACTGGCAGTTTAATGCAGCCTCCATACGAAGTATGGAGAGATCCAAACAACACAGATGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp GGGAAAGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTGAGAGTTCAATTGCCTaGTTCCACATGATGACATAT +
Preference number: 5 (lower is better)
Translates to: GKDKFGHYLGILTGVPAFESSIA*FHMMTY
Trigger: ATATGTCATCATGTGGAACAAGGCAATTGAACTCTC...AAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCTTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp TCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTGCCTTAACAGCATAGGGTTCTaGAAATTCATTTGGATAGGG +
Preference number: 5 (lower is better)
Translates to: SWDFNRGSSLSVVQHLCLNSIGF*KFIWIG
Trigger: CCCTATCCAAATGAATTTCAAGAACCCTATGCTGTT...AAGGCAAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp TCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTGCCTTGATTGGAAAATTGGTTaGTGTCAGGTCAACTACGAT +
Preference number: 5 (lower is better)
Translates to: SWDFNRGSSLSVVQHLCLDWKIG*CQVNYD
Trigger: ATCGTAGTTGACCTGACACAAACCAATTTTCCAATC...AAGGCAAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp CATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTGAGAAAGCCTCTATTTaGGGCTTCTGGTGTCTCTAT +
Preference number: 5 (lower is better)
Translates to: HYLGILTGVPAFLLYSIFEKASI*GFWCLY
Trigger: ATAGAGACACCAGAAGCCCAAAATAGAGGCTTTCTC...AAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp AGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGATTGGAAAATTGGTTaGTGTCAGGTCAACTACGAT +
Preference number: 5 (lower is better)
Translates to: RQIRPLSWDFNRGSSLSVDWKIG*CQVNYD
Trigger: ATCGTAGTTGACCTGACACAAACCAATTTTCCAATC...AACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp TCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAAATGACATGCCAAATTTCTGGATAAGTTaGTGCTCCGAGGTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: SKGLPIVSKHEFLANDMPNFWIS*CSEVPS
Trigger: GCTTGGAACCTCGGAGCACAAACTTATCCAGAAATT...TGGCATGTCATTTGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp AGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTTTTCATCTGTGTTGTTaGGATCTCTCCATACTTCGT +
Preference number: 5 (lower is better)
Translates to: RQIRPLSWDFNRGSSLSVFHLCC*DLSILR
Trigger: ACGAAGTATGGAGAGATCCAAACAACACAGATGAAA...AACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp GCTATTTTGATTCCTTTCAGTTGGGTAGGGCAAATACACTTAAAACGCATTGATGGCAGTGAGAAGACTTaGGCTTGTTTTTCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: AILIPFSWVGQIHLKRIDGSEKT*ACFSEQ
Trigger: CTGCTCAGAAAAACAAGCCAAAGTCTTCTCACTGCC...ATCAATGCGTTTTAAGTGTATTTGCCCTACCCAACTGAAAGGAATCAAAATAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp TCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAAATGACATGCCAGAGAAAGCCTCTATTTaGGGCTTCTGGTGTCTCTAT +
Preference number: 5 (lower is better)
Translates to: SKGLPIVSKHEFLANDMPEKASI*GFWCLY
Trigger: ATAGAGACACCAGAAGCCCAAAATAGAGGCTTTCTC...TGGCATGTCATTTGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp TGTACAGGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCCCACGCATGCAAAAGTaGTCTGCAATGAACTGCCTG +
Preference number: 5 (lower is better)
Translates to: CTGNFKSKGLPIVSKHEFPRMQK*SAMNCL
Trigger: CAGGCAGTTCATTGCAGACAACTTTTGCATGCGTGG...GAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCCTGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp TCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAAATGACATGCCACCCAGCGATTTACTTTaGAAACGTCAGCACTGGAAA +
Preference number: 5 (lower is better)
Translates to: SKGLPIVSKHEFLANDMPPSDLL*KRQHWK
Trigger: TTTCCAGTGCTGACGTTTCAAAAGTAAATCGCTGGG...TGGCATGTCATTTGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp AGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTTCTTGAAATTCATTaGGATAGGGCGTTTCACATA +
Preference number: 5 (lower is better)
Translates to: RQIRPLSWDFNRGSSLSVVLEIH*DRAFHI
Trigger: TATGTGAAACGCCCTATCCAAATGAATTTCAAGAAC...AACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp TCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAAATGACATGCCAACATCTGCAGTGTCATaGCTGAAGCATCCCAAAATT +
Preference number: 5 (lower is better)
Translates to: SKGLPIVSKHEFLANDMPTSAVS*LKHPKI
Trigger: AATTTTGGGATGCTTCAGCAATGACACTGCAGATGT...TGGCATGTCATTTGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp TGTACAGGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTCCAGAAAGACTCCTaGAAGGAGGAAGTTGAGAGG +
Preference number: 5 (lower is better)
Translates to: CTGNFKSKGLPIVSKHEFFQKDS*KEEVER
Trigger: CCTCTCAACTTCCTCCTTCAAGGAGTCTTTCTGGAA...GAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCCTGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp CATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTTTTCATCTGTGTTGTTaGGATCTCTCCATACTTCGT +
Preference number: 5 (lower is better)
Translates to: HYLGILTGVPAFLLYSIFFHLCC*DLSILR
Trigger: ACGAAGTATGGAGAGATCCAAACAACACAGATGAAA...AAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp AGACAAATTCGGCCATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTTCATTTTCATCTGTGTaGTTTGGATCTCTCCATACT +
Preference number: 5 (lower is better)
Translates to: RQIRPLSWDFNRGSSLSVSFSSV*FGSLHT
Trigger: AGTATGGAGAGATCCAAACAACACAGATGAAAATGA...AACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATGGCCGAATTTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp TCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAAATGACATGCCAGAGAGTTCAATTGCCTaGTTCCACATGATGACATAT +
Preference number: 5 (lower is better)
Translates to: SKGLPIVSKHEFLANDMPESSIA*FHMMTY
Trigger: ATATGTCATCATGTGGAACAAGGCAATTGAACTCTC...TGGCATGTCATTTGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp CATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTGTTCTTGAAATTCATTaGGATAGGGCGTTTCACATA +
Preference number: 5 (lower is better)
Translates to: HYLGILTGVPAFLLYSIFVLEIH*DRAFHI
Trigger: TATGTGAAACGCCCTATCCAAATGAATTTCAAGAAC...AAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp CATTATCTTGGGATTTTAACAGGGGTTCCAGCCTTTCTGTTGTACAGCATCTTTTCAAAGATTGGAAAATaGGTTTGTGTCAGGTCAACT +
Preference number: 5 (lower is better)
Translates to: HYLGILTGVPAFLLYSIFSKIGK*VCVRST
Trigger: AGTTGACCTGACACAAACCAATTTTCCAATCTTTGA...AAAGATGCTGTACAACAGAAAGGCTGGAACCCCTGTTAAAATCCCAAGATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp TGTACAGGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCACATCTGCAGTGTCATaGCTGAAGCATCCCAAAATT +
Preference number: 5 (lower is better)
Translates to: CTGNFKSKGLPIVSKHEFTSAVS*LKHPKI
Trigger: AATTTTGGGATGCTTCAGCAATGACACTGCAGATGT...GAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCCTGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp TCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTAGCAAATGACATGCCATCATTTTCATCTGTGTaGTTTGGATCTCTCCATACT +
Preference number: 5 (lower is better)
Translates to: SKGLPIVSKHEFLANDMPSFSSV*FGSLHT
Trigger: AGTATGGAGAGATCCAAACAACACAGATGAAAATGA...TGGCATGTCATTTGCTAAGAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp TGTACAGGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCAACAGCATAGGGTTCTaGAAATTCATTTGGATAGGG +
Preference number: 5 (lower is better)
Translates to: CTGNFKSKGLPIVSKHEFNSIGF*KFIWIG
Trigger: CCCTATCCAAATGAATTTCAAGAACCCTATGCTGTT...GAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCCTGTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp TGTACAGGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTTGGAAGTTTTTAGCTaGTACAACATCTGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: CTGNFKSKGLPIVSKHEFLEVFS*YNICSV
Trigger: GACACTGCAGATGTTGTACAAGCTAAAAACTTCCAA...GAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCCTGTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS-3UTR CAA 90 bp TGTACAGGAAATTTCAAATCAAAAGGACTCCCCATAGTTTCCAAACATGAATTCTCAAAGATTGGAAAATaGGTTTGTGTCAGGTCAACT +
Preference number: 5 (lower is better)
Translates to: CTGNFKSKGLPIVSKHEFSKIGK*VCVRST
Trigger: AGTTGACCTGACACAAACCAATTTTCCAATCTTTGA...GAATTCATGTTTGGAAACTATGGGGAGTCCTTTTGATTTGAAATTTCCTGTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS GCA 72 bp ATGCCCGCAGTCTTCTCTTCCAGCTCGCCCAGACGCTaGCCTCTCTCATCAAGTGCAATCCGGGCTCGGGTC +
Preference number: 6 (lower is better)
Translates to: MPAVFSSSSPRR*PLSSSAIRARV
Trigger: GACCCGAGCCCGGATTGCACTTGATGAGAGAGGGCAGCGTCTGGGCGAGCTGGAAGAGAAGACTGCGGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS GCA 72 bp GATGGACAGAGCCACTTCCAGCCCCACCACTGTTACTaGCACTGCTGCTACCACTGCCAGGGGAAGAGGCAG +
Preference number: 6 (lower is better)
Translates to: DGQSHFQPHHCY*HCCYHCQGKRQ
Trigger: CTGCCTCTTCCCCTGGCAGTGGTAGCAGCAGTGGCAGTAACAGTGGTGGGGCTGGAAGTGGCTCTGTCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000114775.8
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS CCA 72 bp CCCGCCAGCAGCACCTTTCATCCCTTCTATACTACCTaGCCCAGGGATGTGCTGTGCGAGGCTTCGGGATGC +
Preference number: 6 (lower is better)
Translates to: PASSTFHPFYTT*PRDVLCEASGC
Trigger: GCATCCCGAAGCCTCGCACAGCACATCCCTGGGCCAGGTAGTATAGAAGGGATGAAAGGTGCTGCTGGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS GCA 72 bp CAGAGCCACTTCCAGCCCCACCACTGTTACTGCCACTaGTGCTACCACTGCCAGGGGAAGAGGCAGTTAAGC +
Preference number: 6 (lower is better)
Translates to: QSHFQPHHCYCH*CYHCQGKRQLS
Trigger: GCTTAACTGCCTCTTCCCCTGGCAGTGGTAGCAGCAGTGGCAGTAACAGTGGTGGGGCTGGAAGTGGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000114775.8
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS GCA 72 bp GTGCGTGCTTGGAAAACGCTTCTGCGCTGGTCATCATaGCCGCAGTCTTCTCTTCCAGCTCGCCCAGACGCT +
Preference number: 6 (lower is better)
Translates to: VRAWKTLLRWSS*PQSSLPARPDA
Trigger: AGCGTCTGGGCGAGCTGGAAGAGAAGACTGCGGGCATGATGACCAGCGCAGAAGCGTTTTCCAAGCACGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS GCA 72 bp CCTTTCATCCCTTCTATACTACCTGGCCCAGGGATGTaGTGTGCGAGGCTTCGGGATGCTTTTCCTGCTGAG +
Preference number: 6 (lower is better)
Translates to: PFIPSILPGPGM*CARLRDAFPAE
Trigger: CTCAGCAGGAAAAGCATCCCGAAGCCTCGCACAGCACATCCCTGGGCCAGGTAGTATAGAAGGGATGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS CCA 72 bp CTCGCACTGACCAACGCGCCCTCATTGATGAGGAATTaGAGCTGCAAGACAGCCGCACCACTTTCATGTTGG +
Preference number: 6 (lower is better)
Translates to: LALTNAPSLMRN*SCKTAAPLSCW
Trigger: CCAACATGAAAGTGGTGCGGCTGTCTTGCAGCTCCAATTCCTCATCAATGAGGGCGCGTTGGTCAGTGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000114775.8
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS CCA 72 bp TTAGCTCATGTGCGTGCTTGGAAAACGCTTCTGCGCTaGTCATCATGCCCGCAGTCTTCTCTTCCAGCTCGC +
Preference number: 6 (lower is better)
Translates to: LAHVRAWKTLLR*SSCPQSSLPAR
Trigger: GCGAGCTGGAAGAGAAGACTGCGGGCATGATGACCAGCGCAGAAGCGTTTTCCAAGCACGCACATGAGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS TCA 72 bp GATGTGCTGTGCGAGGCTTCGGGATGCTTTTCCTGCTaGGGCTTCCCCGAAGAGTTCTTCTCTGTCGAATGT +
Preference number: 6 (lower is better)
Translates to: DVLCEASGCFSC*GFPEEFFSVEC
Trigger: ACATTCGACAGAGAAGAACTCTTCGGGGAAGCCTCAGCAGGAAAAGCATCCCGAAGCCTCGCACAGCACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS GCA 72 bp GGACTATCATTCAGCTCTGTTAAGCCTGCAATGAACTaGCTGTTCTTTCGAGGAGACCGGGGCTGTCGCTGG +
Preference number: 6 (lower is better)
Translates to: GLSFSSVKPAMN*LFFRGDRGCRW
Trigger: CCAGCGACAGCCCCGGTCTCCTCGAAAGAACAGGCAGTTCATTGCAGGCTTAACAGAGCTGAATGATAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114780.8
ENSMUST00000114782.8
CDS GCA 72 bp GGCCAGGCAGGCACTGTTGCACATGACCACCACATCTaGTTGCAATATGAACGACGTCTCGGTGATGTTGTG +
Preference number: 6 (lower is better)
Translates to: GQAGTVAHDHHI*LQYERRLGDVV
Trigger: CACAACATCACCGAGACGTCGTTCATATTGCAAGCAGATGTGGTGGTCATGTGCAACAGTGCCTGCCTGGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS CCA 72 bp AACAAGATCTGCTTGATAGCCCGGCGGCATTCGTACTaGCCGTGTTTTAACACTGAGGCACGGGATGCTGTC +
Preference number: 6 (lower is better)
Translates to: NKICLIARRHSY*PCFNTEARDAV
Trigger: GACAGCATCCCGTGCCTCAGTGTTAAAACACGGCCAGTACGAATGCCGCCGGGCTATCAAGCAGATCTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS CAA 90 bp GCCTGTTCTTTCGAGGAGACCGGGGCTGTCGCTGGTACAGGTCACTaGATCTATAGAGGTCAATGGTCCCCATGCTTAATAGCACTGTCT +
Preference number: 6 (lower is better)
Translates to: ACSFEETGAVAGTGH*IYRGQWSPCLIALS
Trigger: AGACAGTGCTATTAAGCATGGGGACCATTGACCTCTATAGATCAAGTGACCTGTACCAGCGACAGCCCCGGTCTCCTCGAAAGAACAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS CAA 90 bp CACTGGAAAGACGTTTTCCAGAACTGCAACTCTGAGAGGTTGGACTaGTGCAGTGTCCATTTACATGGTCTGAGGTGGGGGACTTGCAGC +
Preference number: 6 (lower is better)
Translates to: HWKDVFQNCNSERLD*CSVHLHGLRWGTCS
Trigger: GCTGCAAGTCCCCCACCTCAGACCATGTAAATGGACACTGCACAAGTCCAACCTCTCAGAGTTGCAGTTCTGGAAAACGTCTTTCCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS CAA 90 bp CGTCAGCACTGGAAAGACGTTTTCCAGAACTGCAACTCTGAGAGGTaGGACTTGTGCAGTGTCCATTTACATGGTCTGAGGTGGGGGACT +
Preference number: 6 (lower is better)
Translates to: RQHWKDVFQNCNSER*DLCSVHLHGLRWGT
Trigger: AGTCCCCCACCTCAGACCATGTAAATGGACACTGCACAAGTCCAACCTCTCAGAGTTGCAGTTCTGGAAAACGTCTTTCCAGTGCTGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS TCA 72 bp AGAATGGCCGGCCTTTTCTGTCTCAGATTCCACAAATaGAGCGTGTCATCTGAACTCGCACTGACCAACGCG +
Preference number: 6 (lower is better)
Translates to: RMAGLFCLRFHK*SVSSELALTNA
Trigger: CGCGTTGGTCAGTGCGAGTTCAGATGACACGCTTCATTTGTGGAATCTGAGACAGAAAAGGCCGGCCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000114775.8
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS TCA 72 bp GAACTGGACTATCATTCAGCTCTGTTAAGCCTGCAATaGACTGCCTGTTCTTTCGAGGAGACCGGGGCTGTC +
Preference number: 6 (lower is better)
Translates to: ELDYHSALLSLQ*TACSFEETGAV
Trigger: GACAGCCCCGGTCTCCTCGAAAGAACAGGCAGTTCATTGCAGGCTTAACAGAGCTGAATGATAGTCCAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114780.8
ENSMUST00000114782.8
CDS CAA 72 bp GAATTGGAGCTGCAAGACAGCCGCACCACTTTCATGTaGGCAGTAACAGTCAACACCAGGCCTCCCAAGTAT +
Preference number: 6 (lower is better)
Translates to: ELELQDSRTTFM*AVTVNTRPPKY
Trigger: ATACTTGGGAGGCCTGGTGTTGACTGTTACTGCCAACATGAAAGTGGTGCGGCTGTCTTGCAGCTCCAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000114775.8
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS CAA 72 bp TTCGAGGAGACCGGGGCTGTCGCTGGTACAGGTCACTaGATCTATAGAGGTCAATGGTCCCCATGCTTAATA +
Preference number: 6 (lower is better)
Translates to: FEETGAVAGTGH*IYRGQWSPCLI
Trigger: TATTAAGCATGGGGACCATTGACCTCTATAGATCAAGTGACCTGTACCAGCGACAGCCCCGGTCTCCTCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS CAA 72 bp CAGGCAGGCACTGTTGCACATGACCACCACATCTGCTaGCAATATGAACGACGTCTCGGTGATGTTGTGAAC +
Preference number: 6 (lower is better)
Translates to: QAGTVAHDHHIC*QYERRLGDVVN
Trigger: GTTCACAACATCACCGAGACGTCGTTCATATTGCAAGCAGATGTGGTGGTCATGTGCAACAGTGCCTGCCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS CAA 72 bp TGCCCATTTGCACAAAAGCAGGCCAGGCAGGCACTGTaGCACATGACCACCACATCTGCTTGCAATATGAAC +
Preference number: 6 (lower is better)
Translates to: CPFAQKQARQAL*HMTTTSACNMN
Trigger: GTTCATATTGCAAGCAGATGTGGTGGTCATGTGCAACAGTGCCTGCCTGGCCTGCTTTTGTGCAAATGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS CAA 72 bp GACGTTTTCCAGAACTGCAACTCTGAGAGGTTGGACTaGTGCAGTGTCCATTTACATGGTCTGAGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: DVFQNCNSERLD*CSVHLHGLRWG
Trigger: CCCCCACCTCAGACCATGTAAATGGACACTGCACAAGTCCAACCTCTCAGAGTTGCAGTTCTGGAAAACGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS CAA 90 bp AAAGCAGGCCAGGCAGGCACTGTTGCACATGACCACCACATCTGCTaGCAATATGAACGACGTCTCGGTGATGTTGTGAACATAAAGGCA +
Preference number: 6 (lower is better)
Translates to: KAGQAGTVAHDHHIC*QYERRLGDVVNIKA
Trigger: TGCCTTTATGTTCACAACATCACCGAGACGTCGTTCATATTGCAAGCAGATGTGGTGGTCATGTGCAACAGTGCCTGCCTGGCCTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS CAA 90 bp ATCATGATATGCCCATTTGCACAAAAGCAGGCCAGGCAGGCACTGTaGCACATGACCACCACATCTGCTTGCAATATGAACGACGTCTCG +
Preference number: 6 (lower is better)
Translates to: IMICPFAQKQARQAL*HMTTTSACNMNDVS
Trigger: CGAGACGTCGTTCATATTGCAAGCAGATGTGGTGGTCATGTGCAACAGTGCCTGCCTGGCCTGCTTTTGTGCAAATGGGCATATCATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS GCA 72 bp GTTTTCCAGAACTGCAACTCTGAGAGGTTGGACTTGTaGAGTGTCCATTTACATGGTCTGAGGTGGGGGACT +
Preference number: 6 (lower is better)
Translates to: VFQNCNSERLDL*SVHLHGLRWGT
Trigger: AGTCCCCCACCTCAGACCATGTAAATGGACACTGCACAAGTCCAACCTCTCAGAGTTGCAGTTCTGGAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS CCA 72 bp TATCCTTATACTTCAGCATTAGCTCATGTGCGTGCTTaGAAAACGCTTCTGCGCTGGTCATCATGCCCGCAG +
Preference number: 6 (lower is better)
Translates to: YPYTSALAHVRA*KTLLRWSSCPQ
Trigger: CTGCGGGCATGATGACCAGCGCAGAAGCGTTTTCCAAGCACGCACATGAGCTAATGCTGAAGTATAAGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS CAA 90 bp ATTGATGAGGAATTGGAGCTGCAAGACAGCCGCACCACTTTCATGTaGGCAGTAACAGTCAACACCAGGCCTCCCAAGTATTCGTATAGC +
Preference number: 6 (lower is better)
Translates to: IDEELELQDSRTTFM*AVTVNTRPPKYSYS
Trigger: GCTATACGAATACTTGGGAGGCCTGGTGTTGACTGTTACTGCCAACATGAAAGTGGTGCGGCTGTCTTGCAGCTCCAATTCCTCATCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000114775.8
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS CAA 72 bp TTATCCTTATACTTCAGCATTAGCTCATGTGCGTGCTaGGAAAACGCTTCTGCGCTGGTCATCATGCCCGCA +
Preference number: 6 (lower is better)
Translates to: LSLYFSISSCAC*ENASALVIMPA
Trigger: TGCGGGCATGATGACCAGCGCAGAAGCGTTTTCCAAGCACGCACATGAGCTAATGCTGAAGTATAAGGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS TCA 72 bp CCCATGCCGAACTGTCTTGCAAATCTGGAAATAGTCTaGAGTCAGGCTTTCCTGAATTTCCTCTCTCGGAAG +
Preference number: 6 (lower is better)
Translates to: PMPNCLANLEIV*SQAFLNFLSRK
Trigger: CTTCCGAGAGAGGAAATTCAGGAAAGCCTGACTTCAGACTATTTCCAGATTTGCAAGACAGTTCGGCATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000114775.8
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS TCA 72 bp CTTGGGCTATCACTTAAATGTACAACTGGGCCTGGATaGGTCTTGGTGGAGAGTTCAATTGCCTTGTTCCAC +
Preference number: 6 (lower is better)
Translates to: LGLSLKCTTGPG*VLVESSIALFH
Trigger: GTGGAACAAGGCAATTGAACTCTCCACCAAGACTCATCCAGGCCCAGTTGTACATTTAAGTGATAGCCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000114775.8
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS TCA 72 bp CAATGGTCCCCATGCTTAATAGCACTGTCTTCTGTATaGAATCCACCACAACCAGCCCAGTGCAGTTTCCAA +
Preference number: 6 (lower is better)
Translates to: QWSPCLIALSSV*NPPQPAQCSFQ
Trigger: TTGGAAACTGCACTGGGCTGGTTGTGGTGGATTTCATACAGAAGACAGTGCTATTAAGCATGGGGACCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS TCA 72 bp TCAGCACTGGAAAGACGTTTTCCAGAACTGCAACTCTaGGAGGTTGGACTTGTGCAGTGTCCATTTACATGG +
Preference number: 6 (lower is better)
Translates to: SALERRFPELQL*EVGLVQCPFTW
Trigger: CCATGTAAATGGACACTGCACAAGTCCAACCTCTCAGAGTTGCAGTTCTGGAAAACGTCTTTCCAGTGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS GCA 72 bp CGTATGGAGGCTGCATTAAACTGCCAGTTCTGTCCATaGAGGAAAATGTTAGCACTGCTCCTTTCAGTGAGA +
Preference number: 6 (lower is better)
Translates to: RMEAALNCQFCP*RKMLALLLSVR
Trigger: TCTCACTGAAAGGAGCAGTGCTAACATTTTCCTGCATGGACAGAACTGGCAGTTTAATGCAGCCTCCATACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS CAA 72 bp TGGAAAGACGTTTTCCAGAACTGCAACTCTGAGAGGTaGGACTTGTGCAGTGTCCATTTACATGGTCTGAGG +
Preference number: 6 (lower is better)
Translates to: WKDVFQNCNSER*DLCSVHLHGLR
Trigger: CCTCAGACCATGTAAATGGACACTGCACAAGTCCAACCTCTCAGAGTTGCAGTTCTGGAAAACGTCTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS TCA 72 bp CCCAGTGCAGTTTCCAAATGCCACTATTCCATATGCTaGGCTTATAGAAAGGCTGGTAATTTGCTGAGGAGG +
Preference number: 6 (lower is better)
Translates to: PSAVSKCHYSIC*AYRKAGNLLRR
Trigger: CCTCCTCAGCAAATTACCAGCCTTTCTATAAGCTCAGCATATGGAATAGTGGCATTTGGAAACTGCACTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS TCA 72 bp TGTCGAATGTCTGTCCACTTCCACCAAATAGTCCCTTaGGAAAGCCTCTATTTTGGGCTTCTGGTGTCTCTA +
Preference number: 6 (lower is better)
Translates to: CRMSVHFHQIVP*ESLYFGLLVSL
Trigger: TAGAGACACCAGAAGCCCAAAATAGAGGCTTTCTCAAGGGACTATTTGGTGGAAGTGGACAGACATTCGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS CAA 90 bp CCACAGTGCCATTCTCGTAACCTATTAACAGTTTTCCTTCATCTCTaGGGCTATCACTTAAATGTACAACTGGGCCTGGATGAGTCTTGG +
Preference number: 6 (lower is better)
Translates to: PQCHSRNLLTVFLHL*GYHLNVQLGLDESW
Trigger: CCAAGACTCATCCAGGCCCAGTTGTACATTTAAGTGATAGCCCAAGAGATGAAGGAAAACTGTTAATAGGTTACGAGAATGGCACTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000114775.8
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS TCA 72 bp ACTAGACACAGTATTAGTGCTTCCAGAAAGACTCCTTaGAGGAGGAAGTTGAGAGGAGAGATCTGGAAATGG +
Preference number: 6 (lower is better)
Translates to: TRHSISASRKTP*RRKLRGEIWKW
Trigger: CCATTTCCAGATCTCTCCTCTCAACTTCCTCCTTCAAGGAGTCTTTCTGGAAGCACTAATACTGTGTCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS GCA 72 bp GTGTTGTTTGGATCTCTCCATACTTCGTATGGAGGCTaGATTAAACTGCCAGTTCTGTCCATGCAGGAAAAT +
Preference number: 6 (lower is better)
Translates to: VLFGSLHTSYGG*IKLPVLSMQEN
Trigger: ATTTTCCTGCATGGACAGAACTGGCAGTTTAATGCAGCCTCCATACGAAGTATGGAGAGATCCAAACAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS CCA 72 bp TTGAGAGGAGAGATCTGGAAATGGAGGGCTTGTTTCTaGCTCAGGAGTAATAATGTCTTCAACATCACACTG +
Preference number: 6 (lower is better)
Translates to: LRGEIWKWRACF*LRSNNVFNITL
Trigger: CAGTGTGATGTTGAAGACATTATTACTCCTGAGCCAGAAACAAGCCCTCCATTTCCAGATCTCTCCTCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS CCA 72 bp CTTCCACCAAATAGTCCCTTGAGAAAGCCTCTATTTTaGGCTTCTGGTGTCTCTATGGGAGTAAACAAATCG +
Preference number: 6 (lower is better)
Translates to: LPPNSPLRKPLF*ASGVSMGVNKS
Trigger: CGATTTGTTTACTCCCATAGAGACACCAGAAGCCCAAAATAGAGGCTTTCTCAAGGGACTATTTGGTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS CAA 90 bp TCACACGTCTGTTTGCCTTCTCCTGCCTTCTGCTTTTCAAACACTTaGGAAGTTTTTAGCTTGTACAACATCTGCAGTGTCATTGCTGAA +
Preference number: 6 (lower is better)
Translates to: SHVCLPSPAFCFSNT*EVFSLYNICSVIAE
Trigger: TTCAGCAATGACACTGCAGATGTTGTACAAGCTAAAAACTTCCAAAGTGTTTGAAAAGCAGAAGGCAGGAGAAGGCAAACAGACGTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS TCA 72 bp TCTGGCTCAGGAGTAATAATGTCTTCAACATCACACTaGAGTCGTACCTCTAGTGACACTATTTCTGTTGTG +
Preference number: 6 (lower is better)
Translates to: SGSGVIMSSTSH*SRTSSDTISVV
Trigger: CACAACAGAAATAGTGTCACTAGAGGTACGACTTCAGTGTGATGTTGAAGACATTATTACTCCTGAGCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS TCA 72 bp GATTATCGTATACTGATGGTCTCCCATCTCTTGGGATaGAGACGAGTAGTTCATGACCAATTTCCTTTTCCA +
Preference number: 6 (lower is better)
Translates to: DYRILMVSHLLG*RRVVHDQFPFP
Trigger: TGGAAAAGGAAATTGGTCATGAACTACTCGTCTTCATCCCAAGAGATGGGAGACCATCAGTATACGATAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS CAA 72 bp GCCTTCTGCTTTTCAAACACTTTGGAAGTTTTTAGCTaGTACAACATCTGCAGTGTCATTGCTGAAGCATCC +
Preference number: 6 (lower is better)
Translates to: AFCFSNTLEVFS*YNICSVIAEAS
Trigger: GGATGCTTCAGCAATGACACTGCAGATGTTGTACAAGCTAAAAACTTCCAAAGTGTTTGAAAAGCAGAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS TCA 72 bp AGATTGGAAAATTGGTTTGTGTCAGGTCAACTACGATaGGATCTTTCTCTAGAAGTACAGCAACAGCATAGG +
Preference number: 6 (lower is better)
Translates to: RLENWFVSGQLR*DLSLEVQQQHR
Trigger: CCTATGCTGTTGCTGTACTTCTAGAGAAAGATCTCATCGTAGTTGACCTGACACAAACCAATTTTCCAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000114775.8
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8
CDS CAA 72 bp CCATGCATGATGGTTAAACTTGGTCTTCTGCAAGCTTaGTCATATGACAGCCCGCCAGAGAATATTATAAAT +
Preference number: 6 (lower is better)
Translates to: PCMMVKLGLLQA*SYDSPPENIIN
Trigger: ATTTATAATATTCTCTGGCGGGCTGTCATATGACAAAGCTTGCAGAAGACCAAGTTTAACCATCATGCATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000114775.8
ENSMUST00000114780.8
ENSMUST00000114781.8
ENSMUST00000114782.8
ENSMUST00000114787.8