Pregenerated sensors for STXBP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027882Ensembl transcript IDs: ENSMUST00000102621.11, ENSMUST00000106596.4, ENSMUST00000138552.6, ENSMUST00000196679.5
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTTTGTTTTACAACGAGGGCGAAGGGGCTGGAGCAGTTACAACCGTaGTGCTCGTGCACAGGACCTGTTCAGTTCCCAGGCACCCACATG | + |
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Preference number: 1 (lower is better) Translates to: VCFTTRAKGLEQLQP*CSCTGPVQFPGTHM Trigger: CATGTGGGTGCCTGGGAACTGAACAGGTCCTGTGCACGAGCAGCACGGTTGTAACTGCTCCAGCCCCTTCGCCCTCGTTGTAAAACAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106596.4 ENSMUST00000138552.6 |
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| 3UTR CCA 90 bp | GTCAAGAATGCATTCTCAGAGCTCAGGCCTGTAATCCTACTATTTTaGAGGCTTAACCAGGAGTTGGTGAGTTCAAGGCCAGCCTGGACT | + |
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Preference number: 1 (lower is better) Translates to: VKNAFSELRPVILLF*RLNQELVSSRPAWT Trigger: AGTCCAGGCTGGCCTTGAACTCACCAACTCCTGGTTAAGCCTCCAAAATAGTAGGATTACAGGCCTGAGCTCTGAGAATGCATTCTTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138552.6 |
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| 3UTR GCA 90 bp | ATATCTAATAGAGTTAACAGTGGGAGTCAAAAACAGCGTCAAGAATaGATTCTCAGAGCTCAGGCCTGTAATCCTACTATTTTGGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: ISNRVNSGSQKQRQE*ILRAQACNPTILEA Trigger: AGCCTCCAAAATAGTAGGATTACAGGCCTGAGCTCTGAGAATGCATTCTTGACGCTGTTTTTGACTCCCACTGTTAACTCTATTAGATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138552.6 |
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| 3UTR-3UTR TCA 90 bp | TTATCCAGAGGGACCCAGCACCACAATGGGGATGAGAGACCCTTACTAAGGCCTCCAACAGGAGCTATGTaGATCTCAAATGCTGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: LSRGTQHHNGDERPLLRPPTGAM*ISNAAK Trigger: CTTTGCAGCATTTGAGATTCACATAGCTCCTGTTGG...AGGCCTTAGTAAGGGTCTCTCATCCCCATTGTGGTGCTGGGTCCCTCTGGATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138552.6 |
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| 3UTR CAA 90 bp | GAGCTCAGGCCTGTAATCCTACTATTTTGGAGGCTTAACCAGGAGTaGGTGAGTTCAAGGCCAGCCTGGACTATAAACAGTCATTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: ELRPVILLFWRLNQE*VSSRPAWTINSHFQ Trigger: CTGGAAATGACTGTTTATAGTCCAGGCTGGCCTTGAACTCACCAACTCCTGGTTAAGCCTCCAAAATAGTAGGATTACAGGCCTGAGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138552.6 |
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| 3UTR-3UTR TCA 90 bp | AATAGAGTTAACAGTGGGAGTCAAAAACAGCGTCAAGAATGCATTCTCAGAGCTGCACCACAATGGGGATaGGAGACCCTTACTAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: NRVNSGSQKQRQECILRAAPQWG*ETLTKA Trigger: GGCCTTAGTAAGGGTCTCTCATCCCCATTGTGGTGC...AGCTCTGAGAATGCATTCTTGACGCTGTTTTTGACTCCCACTGTTAACTCTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138552.6 |
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| 3UTR GCA 72 bp | ACGAGGGCGAAGGGGCTGGAGCAGTTACAACCGTGCTaGTCGTGCACAGGACCTGTTCAGTTCCCAGGCACC | + |
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Preference number: 3 (lower is better) Translates to: TRAKGLEQLQPC*SCTGPVQFPGT Trigger: GGTGCCTGGGAACTGAACAGGTCCTGTGCACGAGCAGCACGGTTGTAACTGCTCCAGCCCCTTCGCCCTCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106596.4 ENSMUST00000138552.6 |
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| 3UTR GCA 72 bp | ACAACGAGGGCGAAGGGGCTGGAGCAGTTACAACCGTaGTGCTCGTGCACAGGACCTGTTCAGTTCCCAGGC | + |
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Preference number: 3 (lower is better) Translates to: TTRAKGLEQLQP*CSCTGPVQFPG Trigger: GCCTGGGAACTGAACAGGTCCTGTGCACGAGCAGCACGGTTGTAACTGCTCCAGCCCCTTCGCCCTCGTTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106596.4 ENSMUST00000138552.6 |
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| 3UTR TCA 72 bp | GAGATCCATCTCCTCCTGCCTCCCAAGAGCTGGAATTaGAGGCTTGCCGGAGTCACATGCTCAGCTTTTAGG | + |
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Preference number: 3 (lower is better) Translates to: EIHLLLPPKSWN*RLAGVTCSAFR Trigger: CCTAAAAGCTGAGCATGTGACTCCGGCAAGCCTTCAATTCCAGCTCTTGGGAGGCAGGAGGAGATGGATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138552.6 |
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| 3UTR CCA 72 bp | GCATTCTCAGAGCTCAGGCCTGTAATCCTACTATTTTaGAGGCTTAACCAGGAGTTGGTGAGTTCAAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: AFSELRPVILLF*RLNQELVSSRP Trigger: TGGCCTTGAACTCACCAACTCCTGGTTAAGCCTCCAAAATAGTAGGATTACAGGCCTGAGCTCTGAGAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138552.6 |
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| 3UTR CCA 72 bp | TGTGTCTCTAGTTCCAGAGGATATGTTGTCCTCATCTaGCTTTCATGGGCACCAAGCACGTATACAATGCAC | + |
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Preference number: 3 (lower is better) Translates to: CVSSSRGYVVLI*LSWAPSTYTMH Trigger: GTGCATTGTATACGTGCTTGGTGCCCATGAAAGCCAGATGAGGACAACATATCCTCTGGAACTAGAGACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138552.6 |
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| 3UTR CCA 72 bp | AGTTCCAGAGGATATGTTGTCCTCATCTGGCTTTCATaGGCACCAAGCACGTATACAATGCACATACGTTAC | + |
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Preference number: 3 (lower is better) Translates to: SSRGYVVLIWLS*APSTYTMHIRY Trigger: GTAACGTATGTGCATTGTATACGTGCTTGGTGCCCATGAAAGCCAGATGAGGACAACATATCCTCTGGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138552.6 |
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| 3UTR GCA 72 bp | AGAGTTAACAGTGGGAGTCAAAAACAGCGTCAAGAATaGATTCTCAGAGCTCAGGCCTGTAATCCTACTATT | + |
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Preference number: 3 (lower is better) Translates to: RVNSGSQKQRQE*ILRAQACNPTI Trigger: AATAGTAGGATTACAGGCCTGAGCTCTGAGAATGCATTCTTGACGCTGTTTTTGACTCCCACTGTTAACTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138552.6 |
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| CDS-3UTR TCA 90 bp | GGGCGAAGGGGCTGGAGCAGTTACAACCGTGCTGCTCGTGCACAGGACCTGTTCTCCAATACCCTCTTCTaGGAGCCTCCATGGGCACCT | + |
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Preference number: 4 (lower is better) Translates to: GRRGWSSYNRAARAQDLFSNTLF*EPPWAP Trigger: AGGTGCCCATGGAGGCTCTCAGAAGAGGGTATTGGA...GAACAGGTCCTGTGCACGAGCAGCACGGTTGTAACTGCTCCAGCCCCTTCGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138552.6 |
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| CDS-3UTR GCA 90 bp | CAGGACCTGTTCAGTTCCCAGGCACCCACATGGCAGCTCACGCTGGCCTCTAACGCCTCCATGGGCACCTaGACACACGTGTGCACATAC | + |
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Preference number: 4 (lower is better) Translates to: QDLFSSQAPTWQLTLASNASMGT*THVCTY Trigger: GTATGTGCACACGTGTGTGCAGGTGCCCATGGAGGC...GTTAGAGGCCAGCGTGAGCTGCCATGTGGGTGCCTGGGAACTGAACAGGTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138552.6 |
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| CDS-3UTR TCA 90 bp | CCGTGCTGCTCGTGCACAGGACCTGTTCAGTTCCCAGGCACCCACATGGCAGCTTCCAATACCCTCTTCTaGGAGCCTCCATGGGCACTT | + |
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Preference number: 4 (lower is better) Translates to: PCCSCTGPVQFPGTHMAASNTLF*EPPWAL Trigger: AAGTGCCCATGGAGGCTCTCAGAAGAGGGTATTGGA...AGCTGCCATGTGGGTGCCTGGGAACTGAACAGGTCCTGTGCACGAGCAGCACGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106596.4 |
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| CDS-3UTR TCA 90 bp | CACAGGACCTGTTCAGTTCCCAGGCACCCACATGGCAGCTCACGCTGGCCTCTAAATGAGTCTTGCACATaGAAAGCACGCACTCTACCA | + |
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Preference number: 4 (lower is better) Translates to: HRTCSVPRHPHGSSRWPLNESCT*KARTLP Trigger: TGGTAGAGTGCGTGCTTTTCATGTGCAAGACTCATT...TAGAGGCCAGCGTGAGCTGCCATGTGGGTGCCTGGGAACTGAACAGGTCCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138552.6 |
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| CDS-3UTR TCA 90 bp | CCGTGCTGCTCGTGCACAGGACCTGTTCAGTTCCCAGGCACCCACATGGCAGCTGAGCTTTCATTTGTCTaGCAGGTTCACGATTCTTAT | + |
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Preference number: 4 (lower is better) Translates to: PCCSCTGPVQFPGTHMAAELSFV*QVHDSY Trigger: ATAAGAATCGTGAACCTGTCAGACAAATGAAAGCTC...AGCTGCCATGTGGGTGCCTGGGAACTGAACAGGTCCTGTGCACGAGCAGCACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106596.4 ENSMUST00000138552.6 |
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| CDS-3UTR CCA 90 bp | CAGGACCTGTTCAGTTCCCAGGCACCCACATGGCAGCTCACGCTGGCCTCTAACCTCCATGGGCACTTTTaGTGTTGGAGAGATGAAATA | + |
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Preference number: 4 (lower is better) Translates to: QDLFSSQAPTWQLTLASNLHGHF*CWRDEI Trigger: TATTTCATCTCTCCAACACCAAAAGTGCCCATGGAG...GTTAGAGGCCAGCGTGAGCTGCCATGTGGGTGCCTGGGAACTGAACAGGTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106596.4 |
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| CDS-3UTR TCA 90 bp | CAGGACCTGTTCAGTTCCCAGGCACCCACATGGCAGCTCACGCTGGCCTCTAACGAGCTTTCATTTGTCTaGCAGGTTCACGATTCTTAT | + |
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Preference number: 4 (lower is better) Translates to: QDLFSSQAPTWQLTLASNELSFV*QVHDSY Trigger: ATAAGAATCGTGAACCTGTCAGACAAATGAAAGCTC...GTTAGAGGCCAGCGTGAGCTGCCATGTGGGTGCCTGGGAACTGAACAGGTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106596.4 ENSMUST00000138552.6 |
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| CDS-3UTR CCA 90 bp | GGCTGGAGCAGTTACAACCGTGCTGCTCGTGCACAGGACCTGTTCAGTTCCCAGGGGCACTTTTGGTGTTaGAGAGATGAAATAAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GWSSYNRAARAQDLFSSQGHFWC*RDEIKS Trigger: GCTCTTTATTTCATCTCTCCAACACCAAAAGTGCCC...CTGGGAACTGAACAGGTCCTGTGCACGAGCAGCACGGTTGTAACTGCTCCAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106596.4 |
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| CDS-3UTR CCA 90 bp | GCTGCTCGTGCACAGGACCTGTTCAGTTCCCAGGCACCCACATGGCAGCTCACGGGGAATACTCACTTTTaGTGTTGGAGAGATGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: AARAQDLFSSQAPTWQLTGNTHF*CWRDEI Trigger: TATTTCATCTCTCCAACACCAAAAGTGAGTATTCCC...CGTGAGCTGCCATGTGGGTGCCTGGGAACTGAACAGGTCCTGTGCACGAGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138552.6 |
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| CDS-3UTR TCA 90 bp | GAAGGGGCTGGAGCAGTTACAACCGTGCTGCTCGTGCACAGGACCTGTTCAGTTATTACAAGCGTTCAATaGGTCTTGCACATGAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: EGAGAVTTVLLVHRTCSVITSVQ*VLHMKS Trigger: GCTTTTCATGTGCAAGACTCATTGAACGCTTGTAAT...AACTGAACAGGTCCTGTGCACGAGCAGCACGGTTGTAACTGCTCCAGCCCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138552.6 |
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| CDS-3UTR CCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTAGGAGGAGCACCAGCATaGAGTCCTTCACCCGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLGGAPA*SPSPAG Trigger: GCCAGCGGGTGAAGGACTCCATGCTGGTGCTCCTCC...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS-3UTR CCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTAGGGATGGGGGAACAATaGGAACACCAAGGTGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLGMGEQ*EHQGGS Trigger: GGAGCCACCTTGGTGTTCCCATTGTTCCCCCATCCC...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS-3UTR CCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTAGCCATTCCACACTGCTaGGCACCGGGAACAATACGG | + |
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Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLAIPHC*APGTIR Trigger: CCGTATTGTTCCCGGTGCCCAGCAGTGTGGAATGGC...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS-3UTR TCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTACAGCCATTGCCTCCATaGCCACTTCTTTCCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLQPLPP*PLLSCW Trigger: CCAGCAGGAAAGAAGTGGTCATGGAGGCAATGGCTG...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS-3UTR CCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTAGAGTCCTTCACCCGCTaGCCTTCAGCATCTGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLESFTR*PSASVP Trigger: TGGAACAGATGCTGAAGGCCAGCGGGTGAAGGACTC...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| 3UTR CAA 72 bp | CCTGTAATCCTACTATTTTGGAGGCTTAACCAGGAGTaGGTGAGTTCAAGGCCAGCCTGGACTATAAACAGT | + |
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Preference number: 4 (lower is better) Translates to: PVILLFWRLNQE*VSSRPAWTINS Trigger: ACTGTTTATAGTCCAGGCTGGCCTTGAACTCACCAACTCCTGGTTAAGCCTCCAAAATAGTAGGATTACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138552.6 |
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| CDS-3UTR GCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTACTCAGTGGTTTGGCTTaGTGGGATGGGGGAACAATG | + |
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Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLLSGLA*WDGGTM Trigger: CATTGTTCCCCCATCCCAGCAAGCCAAACCACTGAG...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS-3UTR CCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTAGTTCATGCAGGACAGTaGACACAGGGTCAAAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLVHAGQ*TQGQSH Trigger: GTGGCTTTGACCCTGTGTCCACTGTCCTGCATGAAC...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS-3UTR CCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTATTTGTTGAGCAGCACTaGGAGGAGCACCAGCATGGA | + |
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Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLFVEQH*EEHQHG Trigger: TCCATGCTGGTGCTCCTCCCAGTGCTGCTCAACAAA...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS-3UTR CCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTATTTGGCTTGCTGGGATaGGGGAACAATGGGAACACC | + |
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Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLFGLLG*GNNGNT Trigger: GGTGTTCCCATTGTTCCCCCATCCCAGCAAGCCAAA...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS-3UTR CCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTAAGTGGTTTGGCTTGCTaGGATGGGGGAACAATGGGA | + |
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Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLSGLAC*DGGTMG Trigger: TCCCATTGTTCCCCCATCCCAGCAAGCCAAACCACT...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS-3UTR CCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTACCTTTCTCAGTGGTTTaGCTTGCTGGGATGGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLPFSVV*LAGMGE Trigger: TTCCCCCATCCCAGCAAGCCAAACCACTGAGAAAGG...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS-3UTR CCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTACCGATCCTTTCTCAGTaGTTTGGCTTGCTGGGATGG | + |
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Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLPILSQ*FGLLGW Trigger: CCATCCCAGCAAGCCAAACCACTGAGAAAGGATCGG...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS-3UTR TCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTATGTCATGGTTTTTGTTaGGCAGCACTGGGAGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLCHGFC*AALGGA Trigger: TGCTCCTCCCAGTGCTGCTCAACAAAAACCATGACA...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS-3UTR GCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTACACACTGTCACAATCTaGTCAGCCATTGCCTCCATG | + |
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Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLHTVTI*SAIASM Trigger: CATGGAGGCAATGGCTGAGCAGATTGTGACAGTGTG...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS-3UTR CCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTATTAGTTCTGGGTTTCTaGCGAGCACTCACAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLLVLGF*RALTAP Trigger: TGGAGCTGTGAGTGCTCGCCAGAAACCCAGAACTAA...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS-3UTR TCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTATCATATGCCATTGCCTaGAAGGTCAGTTCATGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLSYAIA*KVSSCR Trigger: CCTGCATGAACTGACCTTTCAGGCAATGGCATATGA...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS-3UTR TCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTAGTCCATCGAGAAAGCTaGAAAGTCTCTTCTGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLVHRES*KVSSAD Trigger: GTCTGCAGAAGAGACTTTTCAGCTTTCTCGATGGAC...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS-3UTR GCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTAATCTGCTTTCGGAAGTaGGGCATCTTTTTCATCAGC | + |
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Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLICFRK*GIFFIS Trigger: GCTGATGAAAAAGATGCCGCACTTCCGAAAGCAGAT...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS-3UTR CCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTAGGTTTTCATCCAGAGTaGCACACACTGTCACAATCT | + |
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Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLGFHPE*HTLSQS Trigger: AGATTGTGACAGTGTGTGCCACTCTGGATGAAAACC...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS-3UTR CCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTAATGGGAACACCAAGGTaGCTCCAGTTACGAATCATA | + |
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Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLMGTPR*LQLRII Trigger: TATGATTCGTAACTGGAGCCACCTTGGTGTTCCCAT...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS-3UTR TCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTAAAAAATAATCAGCCTTaGCCCATTTTTCCGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLKNNQP*PIFPVQ Trigger: CTGGACCGGAAAAATGGGTCAAGGCTGATTATTTTT...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS-3UTR GCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTATTTCTCAACCAGCTGTaGAAGCTTACTGGCATTATC | + |
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Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLFLNQL*KLTGII Trigger: GATAATGCCAGTAAGCTTGCACAGCTGGTTGAGAAA...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS-3UTR GCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTAGGTCCTGCTCAGTTTTaGAGAGCTTCTCAATATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLGPAQF*RASQYS Trigger: TGAATATTGAGAAGCTCTGCAAAACTGAGCAGGACC...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS-3UTR CCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTAGGCGTTACTAGGGTCTaGACTGTAACAGTAATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLGVTRV*TVTVIE Trigger: TTCTATTACTGTTACAGTCCAGACCCTAGTAACGCC...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS-3UTR CCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTAGCTGTGCAAGCTTACTaGCATTATCTAGAGGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLAVQAY*HYLEVY Trigger: GTAAACCTCTAGATAATGCCAGTAAGCTTGCACAGC...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS-3UTR CCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTATTGTCGCAGTTGTCATaGTTTTTGTTGAGCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLLSQLS*FLLSST Trigger: AGTGCTGCTCAACAAAAACCATGACAACTGCGACAA...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS-3UTR CCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTACATCCAGGAGCTTTCTaGGTGTTAAAATATGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLHPGAF*VLKYVW Trigger: CCACACATATTTTAACACCCAGAAAGCTCCTGGATG...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS-3UTR TCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTAGAGCTTTCATTTGTCTaGCAGGTTCACGATTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLELSFV*QVHDSY Trigger: ATAAGAATCGTGAACCTGTCAGACAAATGAAAGCTC...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS-3UTR TCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTAATTAAGAGCTGGGACTaGGTTTTACCCTTTATTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLIKSWD*VLPFIR Trigger: CCTAATAAAGGGTAAAACTCAGTCCCAGCTCTTAAT...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS-3UTR GCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTAGTAACAGTAATAGAATaGGTCCGGTACATCAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLVTVIE*VRYIKS Trigger: ACTCTTGATGTACCGGACGCATTCTATTACTGTTAC...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS-3UTR CCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTAATCTTTTTCATCAGCTaGGTAAGAGCGCTAAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLIFFIS*VRALSD Trigger: ATCACTTAGCGCTCTTACCCAGCTGATGAAAAAGAT...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS-3UTR CCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTATCAGCTAAGTTAAGATaGACTACTTGCTTCGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLSAKLR*TTCFEI Trigger: GATCTCGAAGCAAGTAGTCCATCTTAACTTAGCTGA...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS-3UTR TCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTACTTACATCTTCTTATTaGCTTGGAGCAAGATGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLLTSSY*LGARCF Trigger: AAAGCATCTTGCTCCAAGTCAATAAGAAGATGTAAG...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS-3UTR CCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTATACAGATTTTGGTGTTaGAGAGATGAAATAAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLYRFWC*RDEIKS Trigger: GCTCTTTATTTCATCTCTCCAACACCAAAATCTGTA...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS-3UTR CCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTAAACCTGAGATTCCTGTaGAATGAAGGAAATGTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLNLRFL*NEGNVY Trigger: ATAAACATTTCCTTCATTCCACAGGAATCTCAGGTT...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS-3UTR CCA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTATCTATCTTTACATTGTaGATCAGTCTGTCCAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLSIFTL*ISLSRF Trigger: AAATCTGGACAGACTGATCCACAATGTAAAGATAGA...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS CCA 90 bp | TGCCCGTATTTTGTCGCAGTTGTCATGGTTTTTGTTGAGCAGCACTaGGAGGAGCACCAGCATGGAGTCCTTCACCCGCTGGCCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CPYFVAVVMVFVEQH*EEHQHGVLHPLAFS Trigger: GCTGAAGGCCAGCGGGTGAAGGACTCCATGCTGGTGCTCCTCCCAGTGCTGCTCAACAAAAACCATGACAACTGCGACAAAATACGGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS-3UTR CAA 90 bp | CGTGCACAGGACCTGTTCAGTTCCCAGGCACCCACATGGCAGCTCACGCTGGCCAGAAGGTCTGTCATTTaGCAGCATGACGACAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: RAQDLFSSQAPTWQLTLARRSVI*QHDDKS Trigger: ACTTTTGTCGTCATGCTGCAAAATGACAGACCTTCT...GGCCAGCGTGAGCTGCCATGTGGGTGCCTGGGAACTGAACAGGTCCTGTGCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106596.4 ENSMUST00000138552.6 |
||
| CDS TCA 90 bp | AGAGCAGGACTGCCCGTATTTTGTCGCAGTTGTCATGGTTTTTGTTaGGCAGCACTGGGAGGAGCACCAGCATGGAGTCCTTCACCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: RAGLPVFCRSCHGFC*AALGGAPAWSPSPA Trigger: AGCGGGTGAAGGACTCCATGCTGGTGCTCCTCCCAGTGCTGCTCAACAAAAACCATGACAACTGCGACAAAATACGGGCAGTCCTGCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS GCA 90 bp | GTTTTCATCCAGAGTGGCACACACTGTCACAATCTGCTCAGCCATTaGCTCCATGACCACTTCTTTCCTGCTGGCGTTACTAGGGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VFIQSGTHCHNLLSH*LHDHFFPAGVTRVW Trigger: CCAGACCCTAGTAACGCCAGCAGGAAAGAAGTGGTCATGGAGGCAATGGCTGAGCAGATTGTGACAGTGTGTGCCACTCTGGATGAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102621.11 ENSMUST00000196679.5 |
||
| CDS GCA 90 bp | CTCACTCCAGGGTTTTCATCCAGAGTGGCACACACTGTCACAATCTaGTCAGCCATTGCCTCCATGACCACTTCTTTCCTGCTGGCGTTA | + |
|
Preference number: 5 (lower is better) Translates to: LTPGFSSRVAHTVTI*SAIASMTTSFLLAL Trigger: TAACGCCAGCAGGAAAGAAGTGGTCATGGAGGCAATGGCTGAGCAGATTGTGACAGTGTGTGCCACTCTGGATGAAAACCCTGGAGTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102621.11 ENSMUST00000196679.5 |
||
| CDS GCA 90 bp | CAGCATGGAGTCCTTCACCCGCTGGCCTTCAGCATCTGTTCCAAGTaGCAGGTCCTGCTCAGTTTTGCAGAGCTTCTCAATATTCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QHGVLHPLAFSICSK*QVLLSFAELLNIQL Trigger: AAGCTGAATATTGAGAAGCTCTGCAAAACTGAGCAGGACCTGGCACTTGGAACAGATGCTGAAGGCCAGCGGGTGAAGGACTCCATGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS CCA 90 bp | TCGAGAAAGCTGAAAAGTCTCTTCTGCAGACCGATCCTTTCTCAGTaGTTTGGCTTGCTGGGATGGGGGAACAATGGGAACACCAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SRKLKSLFCRPILSQ*FGLLGWGNNGNTKV Trigger: CACCTTGGTGTTCCCATTGTTCCCCCATCCCAGCAAGCCAAACCACTGAGAAAGGATCGGTCTGCAGAAGAGACTTTTCAGCTTTCTCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS-3UTR CAA 90 bp | TGCTGCTCGTGCACAGGACCTGTTCAGTTCCCAGGCACCCACATGGCAGCTCACATAAAGAGCTTTCATTaGTCTGACAGGTTCACGATT | + |
|
Preference number: 5 (lower is better) Translates to: CCSCTGPVQFPGTHMAAHIKSFH*SDRFTI Trigger: AATCGTGAACCTGTCAGACAAATGAAAGCTCTTTAT...GTGAGCTGCCATGTGGGTGCCTGGGAACTGAACAGGTCCTGTGCACGAGCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106596.4 ENSMUST00000138552.6 |
||
| CDS CCA 90 bp | ACCGATCCTTTCTCAGTGGTTTGGCTTGCTGGGATGGGGGAACAATaGGAACACCAAGGTGGCTCCAGTTACGAATCATATCACTATCAT | + |
|
Preference number: 5 (lower is better) Translates to: TDPFSVVWLAGMGEQ*EHQGGSSYESYHYH Trigger: ATGATAGTGATATGATTCGTAACTGGAGCCACCTTGGTGTTCCCATTGTTCCCCCATCCCAGCAAGCCAAACCACTGAGAAAGGATCGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS-3UTR CAA 90 bp | TTATCCAGAGGGACCCAGCACCACAATGGGGATGAGAGACCCTTACTAAGGCCTAGAAGGTCTGTCATTTaGCAGCATGACGACAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LSRGTQHHNGDERPLLRPRRSVI*QHDDKS Trigger: ACTTTTGTCGTCATGCTGCAAAATGACAGACCTTCT...AGGCCTTAGTAAGGGTCTCTCATCCCCATTGTGGTGCTGGGTCCCTCTGGATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138552.6 |
||
| CDS CCA 90 bp | TGCTTCGAGATCTGCTTTCGGAAGTGCGGCATCTTTTTCATCAGCTaGGTAAGAGCGCTAAGTGATGTCTTCCCCTCTGTAGCTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: CFEICFRKCGIFFIS*VRALSDVFPSVAFF Trigger: AAAGAAAGCTACAGAGGGGAAGACATCACTTAGCGCTCTTACCCAGCTGATGAAAAAGATGCCGCACTTCCGAAAGCAGATCTCGAAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS GCA 90 bp | GCTAAGTTAAGATGGACTACTTGCTTCGAGATCTGCTTTCGGAAGTaGGGCATCTTTTTCATCAGCTGGGTAAGAGCGCTAAGTGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: AKLRWTTCFEICFRK*GIFFISWVRALSDV Trigger: GACATCACTTAGCGCTCTTACCCAGCTGATGAAAAAGATGCCGCACTTCCGAAAGCAGATCTCGAAGCAAGTAGTCCATCTTAACTTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS CCA 90 bp | CATTGCCTCCATGACCACTTCTTTCCTGCTGGCGTTACTAGGGTCTaGACTGTAACAGTAATAGAATGCGTCCGGTACATCAAGAGTATA | + |
|
Preference number: 5 (lower is better) Translates to: HCLHDHFFPAGVTRV*TVTVIECVRYIKSI Trigger: TATACTCTTGATGTACCGGACGCATTCTATTACTGTTACAGTCCAGACCCTAGTAACGCCAGCAGGAAAGAAGTGGTCATGGAGGCAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102621.11 ENSMUST00000196679.5 |
||
| CDS CCA 90 bp | AGTGGTTTGGCTTGCTGGGATGGGGGAACAATGGGAACACCAAGGTaGCTCCAGTTACGAATCATATCACTATCATCTTCTATCTTTACA | + |
|
Preference number: 5 (lower is better) Translates to: SGLACWDGGTMGTPR*LQLRIISLSSSIFT Trigger: TGTAAAGATAGAAGATGATAGTGATATGATTCGTAACTGGAGCCACCTTGGTGTTCCCATTGTTCCCCCATCCCAGCAAGCCAAACCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS TCA 90 bp | GCATCCTCCATGATATCTTTGATAAAAGGTGTCCATCGAGAAAGCTaGAAAGTCTCTTCTGCAGACCGATCCTTTCTCAGTGGTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ASSMISLIKGVHRES*KVSSADRSFLSGLA Trigger: AGCCAAACCACTGAGAAAGGATCGGTCTGCAGAAGAGACTTTTCAGCTTTCTCGATGGACACCTTTTATCAAAGATATCATGGAGGATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS GCA 90 bp | TTTCCTGCTGGCGTTACTAGGGTCTGGACTGTAACAGTAATAGAATaGGTCCGGTACATCAAGAGTATAAACCTGAGATTCCTGTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: FPAGVTRVWTVTVIE*VRYIKSINLRFLWN Trigger: ATTCCACAGGAATCTCAGGTTTATACTCTTGATGTACCGGACGCATTCTATTACTGTTACAGTCCAGACCCTAGTAACGCCAGCAGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102621.11 ENSMUST00000196679.5 |
||
| CDS-3UTR CAA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTATCTCAGTGGTTTGGCTaGCTGGGATGGGGGAACAAT | + |
|
Preference number: 5 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLSQWFG*LGWGNN Trigger: ATTGTTCCCCCATCCCAGCAAGCCAAACCACTGAGA...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS-3UTR CAA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTATTGTCATGGTTTTTGTaGAGCAGCACTGGGAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLLSWFL*SSTGRS Trigger: GCTCCTCCCAGTGCTGCTCAACAAAAACCATGACAA...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS CCA 90 bp | TGTAGTAGTCTTCAAGCTTTTTCTCAACCAGCTGTGCAAGCTTACTaGCATTATCTAGAGGTTTACTCTTGTACCTCACTCCAGGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: CSSLQAFSQPAVQAY*HYLEVYSCTSLQGF Trigger: AAAACCCTGGAGTGAGGTACAAGAGTAAACCTCTAGATAATGCCAGTAAGCTTGCACAGCTGGTTGAGAAAAAGCTTGAAGACTACTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102621.11 ENSMUST00000196679.5 |
||
| CDS-3UTR CAA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTAAGAAGGTCTGTCATTTaGCAGCATGACGACAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLRRSVI*QHDDKS Trigger: ACTTTTGTCGTCATGCTGCAAAATGACAGACCTTCT...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS CCA 90 bp | CTCCAGTTACGAATCATATCACTATCATCTTCTATCTTTACATTGTaGATCAGTCTGTCCAGATTTTCTTCAGTGGTTCCATTAATCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LQLRIISLSSSIFTL*ISLSRFSSVVPLIP Trigger: CGGGATTAATGGAACCACTGAAGAAAATCTGGACAGACTGATCCACAATGTAAAGATAGAAGATGATAGTGATATGATTCGTAACTGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS-3UTR CAA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTACCTTACATCTTCTTATaGACTTGGAGCAAGATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLPYIFL*TWSKML Trigger: AAGCATCTTGCTCCAAGTCAATAAGAAGATGTAAGG...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS-3UTR CAA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTATCTTCTATCTTTACATaGTGGATCAGTCTGTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLSSIFT*WISLSR Trigger: TCTGGACAGACTGATCCACAATGTAAAGATAGAAGA...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS-3UTR CAA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTATCCTCCATGATATCTTaGATAAAAGGTGTCCATCGA | + |
|
Preference number: 5 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLSSMIS*IKGVHR Trigger: TCGATGGACACCTTTTATCAAAGATATCATGGAGGA...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS-3UTR CAA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTAATAAAGAGCTTTCATTaGTCTGACAGGTTCACGATT | + |
|
Preference number: 5 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLIKSFH*SDRFTI Trigger: AATCGTGAACCTGTCAGACAAATGAAAGCTCTTTAT...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS-3UTR CAA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTACAAGATGCTTTAATCTaGTTAAAGAGACTGTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLQDALI*LKRLSG Trigger: TCCTGACAGTCTCTTTAACAAGATTAAAGCATCTTG...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS-3UTR CAA 90 bp | CTGATTAGAAAGCCCTGTAGTGTCAGATCTTGTACAAAGCAGCAACAGTATTTACATCTTCTTATTGACTaGGAGCAAGATGCTTTAATC | + |
|
Preference number: 5 (lower is better) Translates to: LIRKPCSVRSCTKQQQYLHLLID*EQDALI Trigger: GATTAAAGCATCTTGCTCCAAGTCAATAAGAAGATG...TAAATACTGTTGCTGCTTTGTACAAGATCTGACACTACAGGGCTTTCTAATCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS GCA 72 bp | CTGGCGAGCACTCACAGCTCCAGAGCCATTCCACACTaGTGGGCACCGGGAACAATACGGCCACTCTTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LASTHSSRAIPH*WAPGTIRPLFG Trigger: TCCAAAGAGTGGCCGTATTGTTCCCGGTGCCCAGCAGTGTGGAATGGCTCTGGAGCTGTGAGTGCTCGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS CCA 72 bp | GCGAGCACTCACAGCTCCAGAGCCATTCCACACTGCTaGGCACCGGGAACAATACGGCCACTCTTTGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: ASTHSSRAIPHC*APGTIRPLFGI Trigger: GATTCCAAAGAGTGGCCGTATTGTTCCCGGTGCCCAGCAGTGTGGAATGGCTCTGGAGCTGTGAGTGCTCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS GCA 72 bp | ATAAGCTTTGGAATTTCCTCCAACACAACCGCGATGTaGCGGTGTCGAACCCGCACCCACAGGTCGTCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ISFGISSNTTAM*RCRTRTHRSSS Trigger: AGACGACGACCTGTGGGTGCGGGTTCGACACCGGCACATCGCGGTTGTGTTGGAGGAAATTCCAAAGCTTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS CCA 72 bp | TCTGCAGACCGATCCTTTCTCAGTGGTTTGGCTTGCTaGGATGGGGGAACAATGGGAACACCAAGGTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SADRSFLSGLAC*DGGTMGTPRWL Trigger: GAGCCACCTTGGTGTTCCCATTGTTCCCCCATCCCAGCAAGCCAAACCACTGAGAAAGGATCGGTCTGCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
||
| CDS GCA 72 bp | TCTTCTGCAGACCGATCCTTTCTCAGTGGTTTGGCTTaGTGGGATGGGGGAACAATGGGAACACCAAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: SSADRSFLSGLA*WDGGTMGTPRW Trigger: CCACCTTGGTGTTCCCATTGTTCCCCCATCCCAGCAAGCCAAACCACTGAGAAAGGATCGGTCTGCAGAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS CCA 72 bp | TTTGTCGCAGTTGTCATGGTTTTTGTTGAGCAGCACTaGGAGGAGCACCAGCATGGAGTCCTTCACCCGCTG | + |
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Preference number: 6 (lower is better) Translates to: FVAVVMVFVEQH*EEHQHGVLHPL Trigger: CAGCGGGTGAAGGACTCCATGCTGGTGCTCCTCCCAGTGCTGCTCAACAAAAACCATGACAACTGCGACAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS CAA 72 bp | CTCTTCTGCAGACCGATCCTTTCTCAGTGGTTTGGCTaGCTGGGATGGGGGAACAATGGGAACACCAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: LFCRPILSQWFG*LGWGNNGNTKV Trigger: CACCTTGGTGTTCCCATTGTTCCCCCATCCCAGCAAGCCAAACCACTGAGAAAGGATCGGTCTGCAGAAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS CAA 72 bp | ACTGCCCGTATTTTGTCGCAGTTGTCATGGTTTTTGTaGAGCAGCACTGGGAGGAGCACCAGCATGGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: TARILSQLSWFL*SSTGRSTSMES Trigger: GGACTCCATGCTGGTGCTCCTCCCAGTGCTGCTCAACAAAAACCATGACAACTGCGACAAAATACGGGCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS GCA 72 bp | GGGTTTTCATCCAGAGTGGCACACACTGTCACAATCTaGTCAGCCATTGCCTCCATGACCACTTCTTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: GFSSRVAHTVTI*SAIASMTTSFL Trigger: CAGGAAAGAAGTGGTCATGGAGGCAATGGCTGAGCAGATTGTGACAGTGTGTGCCACTCTGGATGAAAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102621.11 ENSMUST00000196679.5 |
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| CDS CCA 72 bp | AAGTCTCTTCTGCAGACCGATCCTTTCTCAGTGGTTTaGCTTGCTGGGATGGGGGAACAATGGGAACACCAA | + |
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Preference number: 6 (lower is better) Translates to: KSLLQTDPFSVV*LAGMGEQWEHQ Trigger: TTGGTGTTCCCATTGTTCCCCCATCCCAGCAAGCCAAACCACTGAGAAAGGATCGGTCTGCAGAAGAGACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS CCA 72 bp | CTGAAAAGTCTCTTCTGCAGACCGATCCTTTCTCAGTaGTTTGGCTTGCTGGGATGGGGGAACAATGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: LKSLFCRPILSQ*FGLLGWGNNGN Trigger: GTTCCCATTGTTCCCCCATCCCAGCAAGCCAAACCACTGAGAAAGGATCGGTCTGCAGAAGAGACTTTTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS CAA 72 bp | AAAGTCTCTTCTGCAGACCGATCCTTTCTCAGTGGTTaGGCTTGCTGGGATGGGGGAACAATGGGAACACCA | + |
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Preference number: 6 (lower is better) Translates to: KVSSADRSFLSG*ACWDGGTMGTP Trigger: TGGTGTTCCCATTGTTCCCCCATCCCAGCAAGCCAAACCACTGAGAAAGGATCGGTCTGCAGAAGAGACTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS CCA 72 bp | TTCTCAGTGGTTTGGCTTGCTGGGATGGGGGAACAATaGGAACACCAAGGTGGCTCCAGTTACGAATCATAT | + |
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Preference number: 6 (lower is better) Translates to: FSVVWLAGMGEQ*EHQGGSSYESY Trigger: ATATGATTCGTAACTGGAGCCACCTTGGTGTTCCCATTGTTCCCCCATCCCAGCAAGCCAAACCACTGAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS CCA 72 bp | ATCTGCTTTCGGAAGTGCGGCATCTTTTTCATCAGCTaGGTAAGAGCGCTAAGTGATGTCTTCCCCTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: ICFRKCGIFFIS*VRALSDVFPSV Trigger: TACAGAGGGGAAGACATCACTTAGCGCTCTTACCCAGCTGATGAAAAAGATGCCGCACTTCCGAAAGCAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS CCA 72 bp | GCTTGCTGGGATGGGGGAACAATGGGAACACCAAGGTaGCTCCAGTTACGAATCATATCACTATCATCTTCT | + |
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Preference number: 6 (lower is better) Translates to: ACWDGGTMGTPR*LQLRIISLSSS Trigger: AGAAGATGATAGTGATATGATTCGTAACTGGAGCCACCTTGGTGTTCCCATTGTTCCCCCATCCCAGCAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS GCA 72 bp | AAAAGGTGTCCATCGAGAAAGCTGAAAAGTCTCTTCTaGAGACCGATCCTTTCTCAGTGGTTTGGCTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: KRCPSRKLKSLF*RPILSQWFGLL Trigger: CAGCAAGCCAAACCACTGAGAAAGGATCGGTCTGCAGAAGAGACTTTTCAGCTTTCTCGATGGACACCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS TCA 72 bp | TCATTCTCAATTGGTAGTAGATCATATGCCATTGCCTaGAAGGTCAGTTCATGCAGGACAGTGGACACAGGG | + |
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Preference number: 6 (lower is better) Translates to: SFSIGSRSYAIA*KVSSCRTVDTG Trigger: CCCTGTGTCCACTGTCCTGCATGAACTGACCTTTCAGGCAATGGCATATGATCTACTACCAATTGAGAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS CAA 72 bp | TGTGCAAGCTTACTGGCATTATCTAGAGGTTTACTCTaGTACCTCACTCCAGGGTTTTCATCCAGAGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: CASLLALSRGLL*YLTPGFSSRVA Trigger: TGCCACTCTGGATGAAAACCCTGGAGTGAGGTACAAGAGTAAACCTCTAGATAATGCCAGTAAGCTTGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102621.11 ENSMUST00000196679.5 |
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| CDS GCA 72 bp | GGCGTTACTAGGGTCTGGACTGTAACAGTAATAGAATaGGTCCGGTACATCAAGAGTATAAACCTGAGATTC | + |
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Preference number: 6 (lower is better) Translates to: GVTRVWTVTVIE*VRYIKSINLRF Trigger: GAATCTCAGGTTTATACTCTTGATGTACCGGACGCATTCTATTACTGTTACAGTCCAGACCCTAGTAACGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102621.11 ENSMUST00000196679.5 |
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| CDS GCA 72 bp | TTCATGCAGTCTTCAGCTAAGTTAAGATGGACTACTTaGTTCGAGATCTGCTTTCGGAAGTGCGGCATCTTT | + |
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Preference number: 6 (lower is better) Translates to: FMQSSAKLRWTT*FEICFRKCGIF Trigger: AAAGATGCCGCACTTCCGAAAGCAGATCTCGAAGCAAGTAGTCCATCTTAACTTAGCTGAAGACTGCATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS CCA 72 bp | CCAATACCCTCTTCTGAGAGCCTCCATGGGCACTTTTaGTGTTGGAGAGATGAAATAAAGAGCTTTCATTTG | + |
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Preference number: 6 (lower is better) Translates to: PIPSSESLHGHF*CWRDEIKSFHL Trigger: CAAATGAAAGCTCTTTATTTCATCTCTCCAACACCAAAAGTGCCCATGGAGGCTCTCAGAAGAGGGTATTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106596.4 |
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| CDS CAA 90 bp | CCCTCCTCTAGAAGGTCTGTCATTTTGCAGCATGACGACAAAAGTTaGGTGGTAAACTCATCTAACAGCATTATCTTCCATTCGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: PSSRRSVILQHDDKS*VVNSSNSIIFHSPS Trigger: AGAAGGCGAATGGAAGATAATGCTGTTAGATGAGTTTACCACCAAACTTTTGTCGTCATGCTGCAAAATGACAGACCTTCTAGAGGAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000102621.11 ENSMUST00000106596.4 ENSMUST00000138552.6 ENSMUST00000196679.5 |
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| CDS CCA 72 bp | CTTCAAGCTTTTTCTCAACCAGCTGTGCAAGCTTACTaGCATTATCTAGAGGTTTACTCTTGTACCTCACTC | + |
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Preference number: 6 (lower is better) Translates to: LQAFSQPAVQAY*HYLEVYSCTSL Trigger: GAGTGAGGTACAAGAGTAAACCTCTAGATAATGCCAGTAAGCTTGCACAGCTGGTTGAGAAAAAGCTTGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102621.11 ENSMUST00000196679.5 |
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| CDS CAA 72 bp | TTCTCAGTTATGCCCTCCTCTAGAAGGTCTGTCATTTaGCAGCATGACGACAAAAGTTTGGTGGTAAACTCA | + |
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Preference number: 6 (lower is better) Translates to: FSVMPSSRRSVI*QHDDKSLVVNS Trigger: TGAGTTTACCACCAAACTTTTGTCGTCATGCTGCAAAATGACAGACCTTCTAGAGGAGGGCATAACTGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196679.5 |
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| CDS CAA 72 bp | ATAACAGTTATGCCCTCCTCTAGAAGGTCTGTCATTTaGCAGCATGACGACAAAAGTTTGGTGGTAAACTCA | + |
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Preference number: 6 (lower is better) Translates to: ITVMPSSRRSVI*QHDDKSLVVNS Trigger: TGAGTTTACCACCAAACTTTTGTCGTCATGCTGCAAAATGACAGACCTTCTAGAGGAGGGCATAACTGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102621.11 ENSMUST00000106596.4 ENSMUST00000138552.6 |
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| CDS TCA 72 bp | ATGATATCTTTGATAAAAGGTGTCCATCGAGAAAGCTaGAAAGTCTCTTCTGCAGACCGATCCTTTCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: MISLIKGVHRES*KVSSADRSFLS Trigger: ACTGAGAAAGGATCGGTCTGCAGAAGAGACTTTTCAGCTTTCTCGATGGACACCTTTTATCAAAGATATCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS CCA 72 bp | TTAAACTTATTCATGCAGTCTTCAGCTAAGTTAAGATaGACTACTTGCTTCGAGATCTGCTTTCGGAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: LNLFMQSSAKLR*TTCFEICFRKC Trigger: GCACTTCCGAAAGCAGATCTCGAAGCAAGTAGTCCATCTTAACTTAGCTGAAGACTGCATGAATAAGTTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS CAA 72 bp | AGAAGGTCTGTCATTTTGCAGCATGACGACAAAAGTTaGGTGGTAAACTCATCTAACAGCATTATCTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: RRSVILQHDDKS*VVNSSNSIIFH Trigger: ATGGAAGATAATGCTGTTAGATGAGTTTACCACCAAACTTTTGTCGTCATGCTGCAAAATGACAGACCTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000102621.11 ENSMUST00000106596.4 ENSMUST00000138552.6 ENSMUST00000196679.5 |
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| CDS CCA 72 bp | CGAATCATATCACTATCATCTTCTATCTTTACATTGTaGATCAGTCTGTCCAGATTTTCTTCAGTGGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: RIISLSSSIFTL*ISLSRFSSVVP Trigger: TGGAACCACTGAAGAAAATCTGGACAGACTGATCCACAATGTAAAGATAGAAGATGATAGTGATATGATTCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102621.11 |
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| CDS CAA 90 bp | CATGGGCACTTTTGGTGTTGGAGAGATGAAATAAAGAGCTTTCATTaGTCTGACAGGTTCACGATTCTTATAAATATTCTCTATAACAGT | + |
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Preference number: 6 (lower is better) Translates to: HGHFWCWRDEIKSFH*SDRFTILINILYNS Trigger: ACTGTTATAGAGAATATTTATAAGAATCGTGAACCTGTCAGACAAATGAAAGCTCTTTATTTCATCTCTCCAACACCAAAAGTGCCCATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106596.4 |
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