Pregenerated sensors for STXBP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004626Ensembl transcript IDs: ENSMUST00000004745.9, ENSMUST00000159370.8, ENSMUST00000159888.8, ENSMUST00000159911.8, ENSMUST00000160708.8, ENSMUST00000162867.8
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCGTGTTTTCTCTGGGCCCTCGCCCAGACTGGGAGTGTCTGCCTTaGAGGCGTTCAGCTTGGCCAGGACAGCATGGGCCAGCTGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: SVFSLGPRPDWECLP*RRSAWPGQHGPAGL Trigger: CAGCCCAGCTGGCCCATGCTGTCCTGGCCAAGCTGAACGCCTTCAAGGCAGACACTCCCAGTCTGGGCGAGGGCCCAGAGAAAACACGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159888.8 |
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| 3UTR CCA 90 bp | GTTCAGCTTGGCCAGGACAGCATGGGCCAGCTGGGCTGTGTCTTCTaGACCCTTGCGGTATCGGATGGATGGGTATTCCTGAAGAGTGGC | + |
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Preference number: 1 (lower is better) Translates to: VQLGQDSMGQLGCVF*TLAVSDGWVFLKSG Trigger: GCCACTCTTCAGGAATACCCATCCATCCGATACCGCAAGGGTCCAGAAGACACAGCCCAGCTGGCCCATGCTGTCCTGGCCAAGCTGAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159888.8 |
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| 3UTR CCA 90 bp | TCTGCCTTGAAGGCGTTCAGCTTGGCCAGGACAGCATGGGCCAGCTaGGCTGTGTCTTCTGGACCCTTGCGGTATCGGATGGATGGGTAT | + |
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Preference number: 1 (lower is better) Translates to: SALKAFSLARTAWAS*AVSSGPLRYRMDGY Trigger: ATACCCATCCATCCGATACCGCAAGGGTCCAGAAGACACAGCCCAGCTGGCCCATGCTGTCCTGGCCAAGCTGAACGCCTTCAAGGCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159888.8 |
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| 3UTR CCA 90 bp | CTTCTGGACCCTTGCGGTATCGGATGGATGGGTATTCCTGAAGAGTaGCACACAGTGTGGCTATCTGCTGGGCCAGTGCATCGAGCTGCC | + |
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Preference number: 1 (lower is better) Translates to: LLDPCGIGWMGIPEE*HTVWLSAGPVHRAA Trigger: GGCAGCTCGATGCACTGGCCCAGCAGATAGCCACACTGTGTGCCACTCTTCAGGAATACCCATCCATCCGATACCGCAAGGGTCCAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159888.8 ENSMUST00000162867.8 |
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| 3UTR TCA 90 bp | GCTGTGTCTTCTGGACCCTTGCGGTATCGGATGGATGGGTATTCCTaGAGAGTGGCACACAGTGTGGCTATCTGCTGGGCCAGTGCATCG | + |
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Preference number: 1 (lower is better) Translates to: AVSSGPLRYRMDGYS*RVAHSVAICWASAS Trigger: CGATGCACTGGCCCAGCAGATAGCCACACTGTGTGCCACTCTTCAGGAATACCCATCCATCCGATACCGCAAGGGTCCAGAAGACACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159888.8 ENSMUST00000162867.8 |
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| 3UTR CCA 90 bp | CATGGGCCAGCTGGGCTGTGTCTTCTGGACCCTTGCGGTATCGGATaGATGGGTATTCCTGAAGAGTGGCACACAGTGTGGCTATCTGCT | + |
|
Preference number: 1 (lower is better) Translates to: HGPAGLCLLDPCGIG*MGIPEEWHTVWLSA Trigger: AGCAGATAGCCACACTGTGTGCCACTCTTCAGGAATACCCATCCATCCGATACCGCAAGGGTCCAGAAGACACAGCCCAGCTGGCCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159888.8 ENSMUST00000162867.8 |
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| 3UTR TCA 90 bp | CGCAGGGGGAGGTCTGGCTCAATACAGCTCCCTCTGGGAAGAAAATaGGGTGAGCCCTGGTGGGAAGACAGAAGGGAAGCGTTTATTTCT | + |
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Preference number: 1 (lower is better) Translates to: RRGRSGSIQLPLGRK*GEPWWEDRREAFIS Trigger: AGAAATAAACGCTTCCCTTCTGTCTTCCCACCAGGGCTCACCTCATTTTCTTCCCAGAGGGAGCTGTATTGAGCCAGACCTCCCCCTGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| 3UTR TCA 90 bp | GGGGAGGTCTGGCTCAATACAGCTCCCTCTGGGAAGAAAATGAGGTaGGCCCTGGTGGGAAGACAGAAGGGAAGCGTTTATTTCTCTGGA | + |
|
Preference number: 1 (lower is better) Translates to: GEVWLNTAPSGKKMR*ALVGRQKGSVYFSG Trigger: TCCAGAGAAATAAACGCTTCCCTTCTGTCTTCCCACCAGGGCTCACCTCATTTTCTTCCCAGAGGGAGCTGTATTGAGCCAGACCTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| 3UTR CCA 90 bp | GCATGTGTCAGTGAAGAAGATATGGGCTGCTTTGTAGGTGAAGGTTaGTGTTCCCTGGAAGTCCGCAATCAGGGCCTGAACCGACTTCTC | + |
|
Preference number: 1 (lower is better) Translates to: ACVSEEDMGCFVGEG*CSLEVRNQGLNRLL Trigger: GAGAAGTCGGTTCAGGCCCTGATTGCGGACTTCCAGGGAACACCAACCTTCACCTACAAAGCAGCCCATATCTTCTTCACTGACACATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159888.8 ENSMUST00000162867.8 |
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| 3UTR GCA 90 bp | ACTGAACAAGGGCTCAGGGCATGTGTCAGTGAAGAAGATATGGGCTaGTTTGTAGGTGAAGGTTGGTGTTCCCTGGAAGTCCGCAATCAG | + |
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Preference number: 1 (lower is better) Translates to: TEQGLRACVSEEDMG*FVGEGWCSLEVRNQ Trigger: CTGATTGCGGACTTCCAGGGAACACCAACCTTCACCTACAAAGCAGCCCATATCTTCTTCACTGACACATGCCCTGAGCCCTTGTTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159888.8 ENSMUST00000162867.8 |
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| 3UTR GCA 90 bp | AATCAGGGCCTGAACCGACTTCTCCGTGGGACTCAGCAAATAAATTaGCTCCAAGCTGGGAATGGGTTCTCTCCGTTTGTTGATGTCTTC | + |
|
Preference number: 1 (lower is better) Translates to: NQGLNRLLRGTQQIN*LQAGNGFSPFVDVF Trigger: GAAGACATCAACAAACGGAGAGAACCCATTCCCAGCTTGGAGGCAATTTATTTGCTGAGTCCCACGGAGAAGTCGGTTCAGGCCCTGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159888.8 |
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| 3UTR TCA 90 bp | ACAACCATTTATAACTCTGGTTCCAGGGGATCCCACACCCTATTCTaGCCTCTACAGGCACTGATACTTATGATGCATAAACATACATAC | + |
|
Preference number: 1 (lower is better) Translates to: TTIYNSGSRGSHTLF*PLQALILMMHKHTY Trigger: GTATGTATGTTTATGCATCATAAGTATCAGTGCCTGTAGAGGTCAGAATAGGGTGTGGGATCCCCTGGAACCAGAGTTATAAATGGTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| 3UTR CAA 90 bp | GAGCGTGTTTTCTCTGGGCCCTCGCCCAGACTGGGAGTGTCTGCCTaGAAGGCGTTCAGCTTGGCCAGGACAGCATGGGCCAGCTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: ERVFSGPSPRLGVSA*KAFSLARTAWASWA Trigger: AGCCCAGCTGGCCCATGCTGTCCTGGCCAAGCTGAACGCCTTCAAGGCAGACACTCCCAGTCTGGGCGAGGGCCCAGAGAAAACACGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159888.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGCTGGGCTGTGTCTTCTGGACCCTTGCGGTATCGGATGGATGGGTATTCCTTATCTGCTGGGCCAGTaGATCGAGCTGCCGCCCCCG | + |
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Preference number: 2 (lower is better) Translates to: PAGLCLLDPCGIGWMGIPYLLGQ*IELPPP Trigger: CGGGGGCGGCAGCTCGATGCACTGGCCCAGCAGATA...AGGAATACCCATCCATCCGATACCGCAAGGGTCCAGAAGACACAGCCCAGCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159888.8 ENSMUST00000162867.8 |
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| 3UTR-3UTR CCA 90 bp | CATGGGCCAGCTGGGCTGTGTCTTCTGGACCCTTGCGGTATCGGATGGATGGGTTTTGTAGGTGAAGGTTaGTGTTCCCTGGAAGTCCGC | + |
|
Preference number: 2 (lower is better) Translates to: HGPAGLCLLDPCGIGWMGFVGEG*CSLEVR Trigger: GCGGACTTCCAGGGAACACCAACCTTCACCTACAAA...ACCCATCCATCCGATACCGCAAGGGTCCAGAAGACACAGCCCAGCTGGCCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159888.8 ENSMUST00000162867.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTCGCCCAGACTGGGAGTGTCTGCCTTGAAGGCGTTCAGCTTGGCCAGGACAGGGAGGAAGGCAAGGTaGATCTCTTTCAATGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: PSPRLGVSALKAFSLARTGRKAR*ISFNVF Trigger: GAAGACATTGAAAGAGATCCACCTTGCCTTCCTCCC...TGTCCTGGCCAAGCTGAACGCCTTCAAGGCAGACACTCCCAGTCTGGGCGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159888.8 |
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| 3UTR-3UTR TCA 90 bp | GGGTTGCAGCCCTGGCAACCCCTAATCTGCACCTCTCTATCTCCTCTGCCAAAAGGGAAGAAAATGAGGTaGGCCCTGGTGGGAAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: GLQPWQPLICTSLSPLPKGKKMR*ALVGRQ Trigger: CTGTCTTCCCACCAGGGCTCACCTCATTTTCTTCCC...TTTTGGCAGAGGAGATAGAGAGGTGCAGATTAGGGGTTGCCAGGGCTGCAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| 3UTR-3UTR GCA 90 bp | CCCTCGCCCAGACTGGGAGTGTCTGCCTTGAAGGCGTTCAGCTTGGCCAGGACAGAAGAAGATATGGGCTaGTTTGTAGGTGAAGGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: PSPRLGVSALKAFSLARTEEDMG*FVGEGW Trigger: CCAACCTTCACCTACAAAGCAGCCCATATCTTCTTC...TGTCCTGGCCAAGCTGAACGCCTTCAAGGCAGACACTCCCAGTCTGGGCGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159888.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGCCAGCTGGGCTGTGTCTTCTGGACCCTTGCGGTATCGGATGGATGGGTATCTCCCCTGCTCGGAATaGACAGTAAAGGTTGTAGGT | + |
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Preference number: 2 (lower is better) Translates to: WASWAVSSGPLRYRMDGYLPCSE*TVKVVG Trigger: ACCTACAACCTTTACTGTCCATTCCGAGCAGGGGAG...ATACCCATCCATCCGATACCGCAAGGGTCCAGAAGACACAGCCCAGCTGGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159888.8 ENSMUST00000162867.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGAGCAGTCAGTGCTCTTACCCGCTGAGCCATCTCACCAGCCCCAAGTTTGCTGCCAAAATCAGGCCTaGGTTTGGATGGAGGACCCA | + |
|
Preference number: 2 (lower is better) Translates to: EEQSVLLPAEPSHQPQVCCQNQA*VWMEDP Trigger: TGGGTCCTCCATCCAAACCCAGGCCTGATTTTGGCA...GCAAACTTGGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACTGACTGCTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGGTATTCCTGAAGAGTGGCACACAGTGTGGCTATCTGCTGGGCCAGTGCATTTTGTAGGTGAAGGTTaGTGTTCCCTGGAAGTCCGC | + |
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Preference number: 2 (lower is better) Translates to: MGIPEEWHTVWLSAGPVHFVGEG*CSLEVR Trigger: GCGGACTTCCAGGGAACACCAACCTTCACCTACAAA...ATGCACTGGCCCAGCAGATAGCCACACTGTGTGCCACTCTTCAGGAATACCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159888.8 ENSMUST00000162867.8 |
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| 3UTR CAA 90 bp | GATGTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTACCCGCT | + |
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Preference number: 2 (lower is better) Translates to: DVITDGCEPPCGCWD*NSGPLEEQSVLLPA Trigger: AGCGGGTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| 3UTR-3UTR GCA 90 bp | ATTGGGGATTCAAGTTCTACTTGCAGTAGCTCCTGGGAGGTTCCGGGGAAGAGTAATGAAAGCTACAGATaGTTCTGGGGGCCGGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: IGDSSSTCSSSWEVPGKSNESYR*FWGPGK Trigger: TTTCCCCGGCCCCCAGAAGCATCTGTAGCTTTCATT...ACTCTTCCCCGGAACCTCCCAGGAGCTACTGCAAGTAGAACTTGAATCCCCAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| 3UTR-3UTR CCA 90 bp | ATTCCTGAAGAGTGGCACACAGTGTGGCTATCTGCTGGGCCAGTGCATCGAGCTGAACCGACTTCTCCGTaGGACTCAGCAAATAAATTG | + |
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Preference number: 2 (lower is better) Translates to: IPEEWHTVWLSAGPVHRAEPTSP*DSANKL Trigger: CAATTTATTTGCTGAGTCCCACGGAGAAGTCGGTTC...AGCTCGATGCACTGGCCCAGCAGATAGCCACACTGTGTGCCACTCTTCAGGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159888.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGGGATCCCACACCCTATTCTGACCTCTACAGGCACTGATACTTATGATGCAAAGCGTTTATTTCTCTaGAATAGGAGAGGGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: QGIPHPILTSTGTDTYDAKRLFL*NRRGQR Trigger: CCTCTGCCCTCTCCTATTCCAGAGAAATAAACGCTT...TGCATCATAAGTATCAGTGCCTGTAGAGGTCAGAATAGGGTGTGGGATCCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| 3UTR-3UTR TCA 90 bp | ATCATATGTAAGTACACTGTAACTGTCTTCAGACACACCAGAAGAGGACGTCAGACTTCAAGCCAATACTaGCCCTACAGCCCAGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: IICKYTVTVFRHTRRGRQTSSQY*PYSPGS Trigger: AGAACCTGGGCTGTAGGGTCAGTATTGGCTTGAAGT...CTGACGTCCTCTTCTGGTGTGTCTGAAGACAGTTACAGTGTACTTACATATGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAGGTCTACTCTATTTCCGTTTCTATTTCTGGTGCTGGAGATGCATCAGTGGCAATACAGCTCCCTCTaGGAAGAAAATGAGGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: FRSTLFPFLFLVLEMHQWQYSSL*EENEVS Trigger: GCTCACCTCATTTTCTTCCCAGAGGGAGCTGTATTG...CCACTGATGCATCTCCAGCACCAGAAATAGAAACGGAAATAGAGTAGACCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| 3UTR-3UTR GCA 90 bp | TTTATCATATGTAAGTACACTGTAACTGTCTTCAGACACACCAGAAGAGGACGTCGTTTCTATTTCTGGTaGTGGAGATGCATCAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: FIICKYTVTVFRHTRRGRRFYFW*WRCISG Trigger: CCCACTGATGCATCTCCAGCACCAGAAATAGAAACG...ACGTCCTCTTCTGGTGTGTCTGAAGACAGTTACAGTGTACTTACATATGATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| 3UTR TCA 72 bp | TCTCTGGGCCCTCGCCCAGACTGGGAGTGTCTGCCTTaGAGGCGTTCAGCTTGGCCAGGACAGCATGGGCCA | + |
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Preference number: 3 (lower is better) Translates to: SLGPRPDWECLP*RRSAWPGQHGP Trigger: TGGCCCATGCTGTCCTGGCCAAGCTGAACGCCTTCAAGGCAGACACTCCCAGTCTGGGCGAGGGCCCAGAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159888.8 |
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| 3UTR GCA 72 bp | TGTTTTCTCTGGGCCCTCGCCCAGACTGGGAGTGTCTaGCTTGAAGGCGTTCAGCTTGGCCAGGACAGCATG | + |
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Preference number: 3 (lower is better) Translates to: CFLWALAQTGSV*LEGVQLGQDSM Trigger: CATGCTGTCCTGGCCAAGCTGAACGCCTTCAAGGCAGACACTCCCAGTCTGGGCGAGGGCCCAGAGAAAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159888.8 |
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| 3UTR CCA 72 bp | GGATGGATGGGTATTCCTGAAGAGTGGCACACAGTGTaGCTATCTGCTGGGCCAGTGCATCGAGCTGCCGCC | + |
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Preference number: 3 (lower is better) Translates to: GWMGIPEEWHTV*LSAGPVHRAAA Trigger: GGCGGCAGCTCGATGCACTGGCCCAGCAGATAGCCACACTGTGTGCCACTCTTCAGGAATACCCATCCATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159888.8 ENSMUST00000162867.8 |
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| 3UTR TCA 72 bp | TCTGGACCCTTGCGGTATCGGATGGATGGGTATTCCTaGAGAGTGGCACACAGTGTGGCTATCTGCTGGGCC | + |
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Preference number: 3 (lower is better) Translates to: SGPLRYRMDGYS*RVAHSVAICWA Trigger: GGCCCAGCAGATAGCCACACTGTGTGCCACTCTTCAGGAATACCCATCCATCCGATACCGCAAGGGTCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159888.8 ENSMUST00000162867.8 |
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| 3UTR CCA 72 bp | AACGCAGGGGGAGGTCTGGCTCAATACAGCTCCCTCTaGGAAGAAAATGAGGTGAGCCCTGGTGGGAAGACA | + |
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Preference number: 3 (lower is better) Translates to: NAGGGLAQYSSL*EENEVSPGGKT Trigger: TGTCTTCCCACCAGGGCTCACCTCATTTTCTTCCCAGAGGGAGCTGTATTGAGCCAGACCTCCCCCTGCGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| 3UTR CCA 72 bp | CCTCTCTATCTCCTCTGCCAAAATCAGGCCTGGGTTTaGATGGAGGACCCAGCAAGAGAGCCAGTGCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: PLYLLCQNQAWV*MEDPAREPVPP Trigger: AGGAGGCACTGGCTCTCTTGCTGGGTCCTCCATCCAAACCCAGGCCTGATTTTGGCAGAGGAGATAGAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| 3UTR CCA 72 bp | CCTTGCGGTATCGGATGGATGGGTATTCCTGAAGAGTaGCACACAGTGTGGCTATCTGCTGGGCCAGTGCAT | + |
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Preference number: 3 (lower is better) Translates to: PCGIGWMGIPEE*HTVWLSAGPVH Trigger: ATGCACTGGCCCAGCAGATAGCCACACTGTGTGCCACTCTTCAGGAATACCCATCCATCCGATACCGCAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159888.8 ENSMUST00000162867.8 |
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| 3UTR CCA 72 bp | TCTGCACCTCTCTATCTCCTCTGCCAAAATCAGGCCTaGGTTTGGATGGAGGACCCAGCAAGAGAGCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: SAPLYLLCQNQA*VWMEDPAREPV Trigger: CACTGGCTCTCTTGCTGGGTCCTCCATCCAAACCCAGGCCTGATTTTGGCAGAGGAGATAGAGAGGTGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| 3UTR CCA 72 bp | TGCTCGGAATGGACAGTAAAGGTTGTAGGTGCTATGTaGGGCATCCAGAGAGAACACCTGGGCCTCATAGGG | + |
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Preference number: 3 (lower is better) Translates to: CSEWTVKVVGAM*GIQREHLGLIG Trigger: CCCTATGAGGCCCAGGTGTTCTCTCTGGATGCCCCACATAGCACCTACAACCTTTACTGTCCATTCCGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159888.8 ENSMUST00000162867.8 |
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| 3UTR CCA 72 bp | GGCTGTGTCTTCTGGACCCTTGCGGTATCGGATGGATaGGTATTCCTGAAGAGTGGCACACAGTGTGGCTAT | + |
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Preference number: 3 (lower is better) Translates to: GCVFWTLAVSDG*VFLKSGTQCGY Trigger: ATAGCCACACTGTGTGCCACTCTTCAGGAATACCCATCCATCCGATACCGCAAGGGTCCAGAAGACACAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159888.8 ENSMUST00000162867.8 |
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| 3UTR CCA 72 bp | TCTATCTCCTCTGCCAAAATCAGGCCTGGGTTTGGATaGAGGACCCAGCAAGAGAGCCAGTGCCTCCTAAAC | + |
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Preference number: 3 (lower is better) Translates to: SISSAKIRPGFG*RTQQESQCLLN Trigger: GTTTAGGAGGCACTGGCTCTCTTGCTGGGTCCTCCATCCAAACCCAGGCCTGATTTTGGCAGAGGAGATAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| 3UTR GCA 72 bp | GGGCTCAGGGCATGTGTCAGTGAAGAAGATATGGGCTaGTTTGTAGGTGAAGGTTGGTGTTCCCTGGAAGTC | + |
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Preference number: 3 (lower is better) Translates to: GLRACVSEEDMG*FVGEGWCSLEV Trigger: GACTTCCAGGGAACACCAACCTTCACCTACAAAGCAGCCCATATCTTCTTCACTGACACATGCCCTGAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159888.8 ENSMUST00000162867.8 |
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| 3UTR GCA 72 bp | GCTCTGATTGCTGGAATTGGGGATTCAAGTTCTACTTaGAGTAGCTCCTGGGAGGTTCCGGGGAAGAGTCAG | + |
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Preference number: 3 (lower is better) Translates to: ALIAGIGDSSST*SSSWEVPGKSQ Trigger: CTGACTCTTCCCCGGAACCTCCCAGGAGCTACTGCAAGTAGAACTTGAATCCCCAATTCCAGCAATCAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| 3UTR CCA 72 bp | AGTGAAGAAGATATGGGCTGCTTTGTAGGTGAAGGTTaGTGTTCCCTGGAAGTCCGCAATCAGGGCCTGAAC | + |
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Preference number: 3 (lower is better) Translates to: SEEDMGCFVGEG*CSLEVRNQGLN Trigger: GTTCAGGCCCTGATTGCGGACTTCCAGGGAACACCAACCTTCACCTACAAAGCAGCCCATATCTTCTTCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159888.8 ENSMUST00000162867.8 |
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| 3UTR CCA 72 bp | GGAATTGGGGATTCAAGTTCTACTTGCAGTAGCTCCTaGGAGGTTCCGGGGAAGAGTCAGGATTCAGGTCTA | + |
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Preference number: 3 (lower is better) Translates to: GIGDSSSTCSSS*EVPGKSQDSGL Trigger: TAGACCTGAATCCTGACTCTTCCCCGGAACCTCCCAGGAGCTACTGCAAGTAGAACTTGAATCCCCAATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| 3UTR GCA 72 bp | CTCTTACCCGCTGAGCCATCTCACCAGCCCCAAGTTTaGTGTATTTTAAATGCTAGCTCTGATTGCTGGAAT | + |
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Preference number: 3 (lower is better) Translates to: LLPAEPSHQPQV*CILNASSDCWN Trigger: ATTCCAGCAATCAGAGCTAGCATTTAAAATACAGCAAACTTGGGGCTGGTGAGATGGCTCAGCGGGTAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| 3UTR CAA 72 bp | TTCTCTGGGCCCTCGCCCAGACTGGGAGTGTCTGCCTaGAAGGCGTTCAGCTTGGCCAGGACAGCATGGGCC | + |
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Preference number: 4 (lower is better) Translates to: FSGPSPRLGVSA*KAFSLARTAWA Trigger: GGCCCATGCTGTCCTGGCCAAGCTGAACGCCTTCAAGGCAGACACTCCCAGTCTGGGCGAGGGCCCAGAGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159888.8 |
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| CDS-3UTR TCA 90 bp | TGGAGGACCCAGCAAGAGAGCCAGTGCCTCCTAAACTTCAAGCCAATACTGACCAGCCCGCGGAGTTGGTaGCAGTGCCGCCCAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: WRTQQESQCLLNFKPILTSPRSW*QCRPAA Trigger: AGCAGCTGGGCGGCACTGTCACCAACTCCGCGGGCT...GGTCAGTATTGGCTTGAAGTTTAGGAGGCACTGGCTCTCTTGCTGGGTCCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| CDS-3UTR CCA 90 bp | GGGTTGCAGCCCTGGCAACCCCTAATCTGCACCTCTCTATCTCCTCTGCCAAAAACAGCATGGGCCAGCTaGGCTGTGTCTTCTGGACCC | + |
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Preference number: 4 (lower is better) Translates to: GLQPWQPLICTSLSPLPKTAWAS*AVSSGP Trigger: GGGTCCAGAAGACACAGCCCAGCTGGCCCATGCTGT...TTTTGGCAGAGGAGATAGAGAGGTGCAGATTAGGGGTTGCCAGGGCTGCAACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| CDS-3UTR CCA 90 bp | GGGTTGCAGCCCTGGCAACCCCTAATCTGCACCTCTCTATCTCCTCTGCCAAAAGAGACAGCTGGTAGGTaGGCTCCATGCGCTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLQPWQPLICTSLSPLPKETAGR*APCALS Trigger: GGAGAGAGCGCATGGAGCCCACCTACCAGCTGTCTC...TTTTGGCAGAGGAGATAGAGAGGTGCAGATTAGGGGTTGCCAGGGCTGCAACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR GCA 90 bp | ACAGTGAAAACGCAGGGGGAGGTCTGGCTCAATACAGCTCCCTCTGGGAAGAAAGGTCCTGCTCCACACTaGACAGCTTCTCCACCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TVKTQGEVWLNTAPSGKKGPAPH*TASPPS Trigger: GCTCGGTGGAGAAGCTGTGCAGTGTGGAGCAGGACC...TTTCTTCCCAGAGGGAGCTGTATTGAGCCAGACCTCCCCCTGCGTTTTCACTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR GCA 90 bp | GAAGAGCAGTCAGTGCTCTTACCCGCTGAGCCATCTCACCAGCCCCAAGTTTGCAGGCTGCTGTACGACTaGACGTTGGCATGCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: EEQSVLLPAEPSHQPQVCRLLYD*TLACWI Trigger: GATCCAGCATGCCAACGTGCAGTCGTACAGCAGCCT...GCAAACTTGGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACTGACTGCTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR CCA 90 bp | TTGGAAGAGCAGTCAGTGCTCTTACCCGCTGAGCCATCTCACCAGCCCCAAGTTGATCTTGTCGTAGGGTaGCACCGAGGCATCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LEEQSVLLPAEPSHQPQVDLVVG*HRGIQQ Trigger: CTGCTGGATGCCTCGGTGCCACCCTACGACAAGATC...AACTTGGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACTGACTGCTCTTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| 3UTR CAA 72 bp | ACCTCTCTATCTCCTCTGCCAAAATCAGGCCTGGGTTaGGATGGAGGACCCAGCAAGAGAGCCAGTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TSLSPLPKSGLG*DGGPSKRASAS Trigger: GGAGGCACTGGCTCTCTTGCTGGGTCCTCCATCCAAACCCAGGCCTGATTTTGGCAGAGGAGATAGAGAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR CCA 90 bp | GGGCAGGACAGTGAAAACGCAGGGGGAGGTCTGGCTCAATACAGCTCCCTCTGGACTCACTCAGCCCTGTaGTCTCATACCTGTATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GQDSENAGGGLAQYSSLWTHSAL*SHTCMC Trigger: ACACATACAGGTATGAGACCACAGGGCTGAGTGAGT...CCAGAGGGAGCTGTATTGAGCCAGACCTCCCCCTGCGTTTTCACTGTCCTGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR CCA 90 bp | GGTTGCTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTACCCCTGCATCAGAGCCCATaGCCAGGTCCTGCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GCWDLNSGPLEEQSVLLPLHQSP*PGPAPH Trigger: GTGTGGAGCAGGACCTGGCCATGGGCTCTGATGCAG...GGGTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR CCA 90 bp | TTGGAAGAGCAGTCAGTGCTCTTACCCGCTGAGCCATCTCACCAGCCCCAAGTTTGCACGTTGGCATGCTaGATCAGCTTGGCCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LEEQSVLLPAEPSHQPQVCTLAC*ISLARF Trigger: GAACCTGGCCAAGCTGATCCAGCATGCCAACGTGCA...AACTTGGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACTGACTGCTCTTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| 3UTR CAA 72 bp | ATTGCCTCCAAGCTGGGAATGGGTTCTCTCCGTTTGTaGATGTCTTCCACGATGGTGATGCCCTCCGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IASKLGMGSLRL*MSSTMVMPSAR Trigger: CCTGGCGGAGGGCATCACCATCGTGGAAGACATCAACAAACGGAGAGAACCCATTCCCAGCTTGGAGGCAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159888.8 |
||
| CDS-3UTR TCA 90 bp | TGGAGGACCCAGCAAGAGAGCCAGTGCCTCCTAAACTTCAAGCCAATACTGACCGGGCTGCTTTGTAGGTaGAGGTTGGTGTTCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WRTQQESQCLLNFKPILTGLLCR*RLVFPG Trigger: TCCAGGGAACACCAACCTTCACCTACAAAGCAGCCC...GGTCAGTATTGGCTTGAAGTTTAGGAGGCACTGGCTCTCTTGCTGGGTCCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR TCA 90 bp | GAAGAGCAGTCAGTGCTCTTACCCGCTGAGCCATCTCACCAGCCCCAAGTTTGCATGGATGGGTATTCCTaGAGAGTGGCACACAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: EEQSVLLPAEPSHQPQVCMDGYS*RVAHSV Trigger: CACACTGTGTGCCACTCTTCAGGAATACCCATCCAT...GCAAACTTGGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACTGACTGCTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR TCA 90 bp | ATCTGCACCTCTCTATCTCCTCTGCCAAAATCAGGCCTGGGTTTGGATGGAGGATGGGAGTGTCTGCCTTaGAGGCGTTCAGCTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ICTSLSPLPKSGLGLDGGWECLP*RRSAWP Trigger: TGGCCAAGCTGAACGCCTTCAAGGCAGACACTCCCA...TCCTCCATCCAAACCCAGGCCTGATTTTGGCAGAGGAGATAGAGAGGTGCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR TCA 90 bp | GGGTTGCAGCCCTGGCAACCCCTAATCTGCACCTCTCTATCTCCTCTGCCAAAACTGCCCGGTCCATTATaGGTAGCTGTGAGCGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GLQPWQPLICTSLSPLPKLPGPL*VAVSVF Trigger: AAACACGCTCACAGCTACTCATAATGGACCGGGCAG...TTTTGGCAGAGGAGATAGAGAGGTGCAGATTAGGGGTTGCCAGGGCTGCAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR TCA 90 bp | TTGGAAGAGCAGTCAGTGCTCTTACCCGCTGAGCCATCTCACCAGCCCCAAGTTTGTGGGACAGGTCTTTaGTGTTGGCCTTGTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LEEQSVLLPAEPSHQPQVCGTGL*CWPCLW Trigger: CCACAGACAAGGCCAACATCAAAGACCTGTCCCACA...AACTTGGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACTGACTGCTCTTCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR GCA 90 bp | GGGCAGGACAGTGAAAACGCAGGGGGAGGTCTGGCTCAATACAGCTCCCTCTGGGAAGAAGATATGGGCTaGTTTGTAGGTGAAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GQDSENAGGGLAQYSSLWEEDMG*FVGEGW Trigger: CCAACCTTCACCTACAAAGCAGCCCATATCTTCTTC...CCAGAGGGAGCTGTATTGAGCCAGACCTCCCCCTGCGTTTTCACTGTCCTGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR GCA 90 bp | GTGAGCCCTGGTGGGAAGACAGAAGGGAAGCGTTTATTTCTCTGGAATAGGAGATGGGGACACGGGGTCTaGTGCCCGGTCCATTATGAG | + |
|
Preference number: 4 (lower is better) Translates to: VSPGGKTEGKRLFLWNRRWGHGV*CPVHYE Trigger: CTCATAATGGACCGGGCAGCAGACCCCGTGTCCCCA...TCTCCTATTCCAGAGAAATAAACGCTTCCCTTCTGTCTTCCCACCAGGGCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR CCA 90 bp | ATCTGCACCTCTCTATCTCCTCTGCCAAAATCAGGCCTGGGTTTGGATGGAGGAGAGTGGCACACAGTGTaGCTATCTGCTGGGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ICTSLSPLPKSGLGLDGGEWHTV*LSAGPV Trigger: CACTGGCCCAGCAGATAGCCACACTGTGTGCCACTC...TCCTCCATCCAAACCCAGGCCTGATTTTGGCAGAGGAGATAGAGAGGTGCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR CCA 90 bp | GGGTTGCAGCCCTGGCAACCCCTAATCTGCACCTCTCTATCTCCTCTGCCAAAACATGCTGGATCAGCTTaGCCAGGTTCTCCTCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLQPWQPLICTSLSPLPKHAGSA*PGSPHS Trigger: TGAGTGAGGAGAACCTGGCCAAGCTGATCCAGCATG...TTTTGGCAGAGGAGATAGAGAGGTGCAGATTAGGGGTTGCCAGGGCTGCAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR CCA 90 bp | GGGTTTGGATGGAGGACCCAGCAAGAGAGCCAGTGCCTCCTAAACTTCAAGCCATGTACGACTGCACGTTaGCATGCTGGATCAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GFGWRTQQESQCLLNFKPCTTAR*HAGSAW Trigger: CCAAGCTGATCCAGCATGCCAACGTGCAGTCGTACA...TGGCTTGAAGTTTAGGAGGCACTGGCTCTCTTGCTGGGTCCTCCATCCAAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGGACCCAGCAAGAGAGCCAGTGCCTCCTAAACTTCAAGCCAATACTGACCCACATCCTTGATGACTaGGGACCAGCGAGACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WRTQQESQCLLNFKPILTHILDD*GPARQL Trigger: CAGCTGTCTCGCTGGTCCCCAGTCATCAAGGATGTG...GGTCAGTATTGGCTTGAAGTTTAGGAGGCACTGGCTCTCTTGCTGGGTCCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| 3UTR CAA 72 bp | CCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTaGGAAGAGCAGTCAGTGCTCTTACCCGCTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PPCGCWDLNSGP*EEQSVLLPAEP Trigger: TGGCTCAGCGGGTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR GCA 90 bp | CAGGATTCAGGTCTACTCTATTTCCGTTTCTATTTCTGGTGCTGGAGATGCATCTATCTGCTGGGCCAGTaGATCGAGCTGCCGCCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QDSGLLYFRFYFWCWRCIYLLGQ*IELPPP Trigger: CGGGGGCGGCAGCTCGATGCACTGGCCCAGCAGATA...GATGCATCTCCAGCACCAGAAATAGAAACGGAAATAGAGTAGACCTGAATCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR GCA 90 bp | GAAGAGCAGTCAGTGCTCTTACCCGCTGAGCCATCTCACCAGCCCCAAGTTTGCCAGTCATCTGCCAAATaGAGGTGCGTAGAGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: EEQSVLLPAEPSHQPQVCQSSAK*RCVEYL Trigger: CAAGTACTCTACGCACCTGCATTTGGCAGATGACTG...GCAAACTTGGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACTGACTGCTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR GCA 90 bp | GAAGAGCAGTCAGTGCTCTTACCCGCTGAGCCATCTCACCAGCCCCAAGTTTGCCTTCATGCAGTCATCTaGCAAATGCAGGTGCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: EEQSVLLPAEPSHQPQVCLHAVI*QMQVRR Trigger: TCTACGCACCTGCATTTGGCAGATGACTGCATGAAG...GCAAACTTGGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACTGACTGCTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR GCA 90 bp | ACTCAAGAACCTTCATGGCTTCACACAACCATTTATAACTCTGGTTCCAGGGGAGCGAGCGCTGACAGCTaGCTGGGAGCTAGGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: TQEPSWLHTTIYNSGSRGASADS*LGARHR Trigger: CCTGTGCCTAGCTCCCAGGCAGCTGTCAGCGCTCGC...TCCCCTGGAACCAGAGTTATAAATGGTTGTGTGAAGCCATGAAGGTTCTTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCCTGGCAACCCCTAATCTGCACCTCTCTATCTCCTCTGCCAAAATCAGGCTTGTTTTTGTGCCAGTaGCCAAAGCGAGCGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: QPWQPLICTSLSPLPKSGLFLCQ*PKRALT Trigger: TGTCAGCGCTCGCTTTGGCCACTGGCACAAAAACAA...GCCTGATTTTGGCAGAGGAGATAGAGAGGTGCAGATTAGGGGTTGCCAGGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| 3UTR CAA 72 bp | ACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NSGPLEEQSVL Trigger: GAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR TCA 90 bp | TGGAGGACCCAGCAAGAGAGCCAGTGCCTCCTAAACTTCAAGCCAATACTGACCCAGGGCATGTGTCAGTaGAGAAGATATGGGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WRTQQESQCLLNFKPILTQGMCQ*RRYGLL Trigger: AAGCAGCCCATATCTTCTTCACTGACACATGCCCTG...GGTCAGTATTGGCTTGAAGTTTAGGAGGCACTGGCTCTCTTGCTGGGTCCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR CCA 90 bp | GGGTTTGGATGGAGGACCCAGCAAGAGAGCCAGTGCCTCCTAAACTTCAAGCCAGGGAGGAAGGCAAGGTaGATCTCTTTCAATGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GFGWRTQQESQCLLNFKPGRKAR*ISFNVF Trigger: GAAGACATTGAAAGAGATCCACCTTGCCTTCCTCCC...TGGCTTGAAGTTTAGGAGGCACTGGCTCTCTTGCTGGGTCCTCCATCCAAACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR CCA 90 bp | TCTATCTCCTCTGCCAAAATCAGGCCTGGGTTTGGATGGAGGACCCAGCAAGAGGTTGTAGGTGCTATGTaGGGCATCCAGAGAGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: SISSAKIRPGFGWRTQQEVVGAM*GIQREH Trigger: GTGTTCTCTCTGGATGCCCCACATAGCACCTACAAC...CTCTTGCTGGGTCCTCCATCCAAACCCAGGCCTGATTTTGGCAGAGGAGATAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGGACCCAGCAAGAGAGCCAGTGCCTCCTAAACTTCAAGCCAATACTGACCTGTTGGCCTTGTCTGTaGTCAGCCTCTTACTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: WRTQQESQCLLNFKPILTCWPCL*SASYSH Trigger: GTGAGAGTAAGAGGCTGACCACAGACAAGGCCAACA...GGTCAGTATTGGCTTGAAGTTTAGGAGGCACTGGCTCTCTTGCTGGGTCCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR CCA 90 bp | ATCTGCACCTCTCTATCTCCTCTGCCAAAATCAGGCCTGGGTTTGGATGGAGGACCCTCATTTCCGACATaGCGACACCACCCACAATGT | + |
|
Preference number: 4 (lower is better) Translates to: ICTSLSPLPKSGLGLDGGPSFPT*RHHPQC Trigger: ACATTGTGGGTGGTGTCGCCATGTCGGAAATGAGGG...TCCTCCATCCAAACCCAGGCCTGATTTTGGCAGAGGAGATAGAGAGGTGCAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR TCA 90 bp | ATCTGCACCTCTCTATCTCCTCTGCCAAAATCAGGCCTGGGTTTGGATGGAGGATCTCCACCGAGCCCTTaGAATGCTTCATGCAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ICTSLSPLPKSGLGLDGGSPPSP*NASCSH Trigger: ATGACTGCATGAAGCATTTCAAGGGCTCGGTGGAGA...TCCTCCATCCAAACCCAGGCCTGATTTTGGCAGAGGAGATAGAGAGGTGCAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR GCA 90 bp | TTGGAAGAGCAGTCAGTGCTCTTACCCGCTGAGCCATCTCACCAGCCCCAAGTTCTTCTTGGAAACATCTaGTATGTGCATGTGCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LEEQSVLLPAEPSHQPQVLLGNI*YVHVPK Trigger: CTTCGGCACATGCACATAGCAGATGTTTCCAAGAAG...AACTTGGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACTGACTGCTCTTCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTATCTCCTCTGCCAAAATCAGGCCTGGGTTTGGATGGAGGACCCAGCAAGTCTGCCAAATGCAGGTaGGTAGAGTACTTGTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLSPLPKSGLGLDGGPSKSAKCR*VEYLFS Trigger: GCTGAACAAGTACTCTACGCACCTGCATTTGGCAGA...CTTGCTGGGTCCTCCATCCAAACCCAGGCCTGATTTTGGCAGAGGAGATAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR GCA 90 bp | ATTGGGGATTCAAGTTCTACTTGCAGTAGCTCCTGGGAGGTTCCGGGGAAGAGTACCGAGCCCTTGAAATaGTTCATGCAGTCATCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: IGDSSSTCSSSWEVPGKSTEPLK*FMQSSA Trigger: GGCAGATGACTGCATGAAGCATTTCAAGGGCTCGGT...ACTCTTCCCCGGAACCTCCCAGGAGCTACTGCAAGTAGAACTTGAATCCCCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR CCA 90 bp | ATCGGATGGATGGGTATTCCTGAAGAGTGGCACACAGTGTGGCTATCTGCTGGGAAATTGCCTCCAAGCTaGGAATGGGTTCTCTCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: IGWMGIPEEWHTVWLSAGKLPPS*EWVLSV Trigger: AACGGAGAGAACCCATTCCCAGCTTGGAGGCAATTT...CCCAGCAGATAGCCACACTGTGTGCCACTCTTCAGGAATACCCATCCATCCGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162867.8 |
||
| CDS-3UTR CCA 90 bp | TTGCAGCCCTGGCAACCCCTAATCTGCACCTCTCTATCTCCTCTGCCAAAATCATTTGTAGGTGAAGGTTaGTGTTCCCTGGAAGTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LQPWQPLICTSLSPLPKSFVGEG*CSLEVR Trigger: GCGGACTTCCAGGGAACACCAACCTTCACCTACAAA...TGATTTTGGCAGAGGAGATAGAGAGGTGCAGATTAGGGGTTGCCAGGGCTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTATCTCCTCTGCCAAAATCAGGCCTGGGTTTGGATGGAGGACCCAGCAAGGGTATTCCTGAAGAGTaGCACACAGTGTGGCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSPLPKSGLGLDGGPSKGIPEE*HTVWLS Trigger: AGATAGCCACACTGTGTGCCACTCTTCAGGAATACC...CTTGCTGGGTCCTCCATCCAAACCCAGGCCTGATTTTGGCAGAGGAGATAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTGAAAACGCAGGGGGAGGTCTGGCTCAATACAGCTCCCTCTGGGAAGAAAATCGAGGAAGCGGGTTaGAGTAAGGATGTGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TVKTQGEVWLNTAPSGKKIEEAG*SKDVRR Trigger: TCTTCTCACATCCTTACTCCAACCCGCTTCCTCGAT...TTTCTTCCCAGAGGGAGCTGTATTGAGCCAGACCTCCCCCTGCGTTTTCACTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR GCA 90 bp | AGACTCAAGAACCTTCATGGCTTCACACAACCATTTATAACTCTGGTTCCAGGGGACTGCACGTTGGCATaGTGGATCAGCTTGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLKNLHGFTQPFITLVPGDCTLA*WISLAR Trigger: CCTGGCCAAGCTGATCCAGCATGCCAACGTGCAGTC...CCCTGGAACCAGAGTTATAAATGGTTGTGTGAAGCCATGAAGGTTCTTGAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR TCA 90 bp | AGGACGTCAGATGTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTCTTCAGGAGTTCTGTaGCCTTCTTGGAAACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RTSDVITDGCEPPCGCWDSSGVL*PSWKHL Trigger: CAGATGTTTCCAAGAAGGTCACAGAACTCCTGAAGA...ATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGACATCTGACGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR TCA 90 bp | ATTGGGGATTCAAGTTCTACTTGCAGTAGCTCCTGGGAGGTTCCGGGGAAGAGTTTGTTCAGCTCCTTCTaGTACTGTGGCATCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IGDSSSTCSSSWEVPGKSLFSSF*YCGIFF Trigger: GAAAAAGATGCCACAGTATCAGAAGGAGCTGAACAA...ACTCTTCCCCGGAACCTCCCAGGAGCTACTGCAAGTAGAACTTGAATCCCCAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR GCA 90 bp | CAGGATTCAGGTCTACTCTATTTCCGTTTCTATTTCTGGTGCTGGAGATGCATCCCAGCTTTGTTTTTGTaGCAGTGGCCAAAGCGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QDSGLLYFRFYFWCWRCIPALFL*QWPKRA Trigger: CGCTCGCTTTGGCCACTGGCACAAAAACAAAGCTGG...GATGCATCTCCAGCACCAGAAATAGAAACGGAAATAGAGTAGACCTGAATCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGGATCCCACACCCTATTCTGACCTCTACAGGCACTGATACTTATGATGCAGAACCGACTTCTCCGTaGGACTCAGCAAATAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: QGIPHPILTSTGTDTYDAEPTSP*DSANKL Trigger: CAATTTATTTGCTGAGTCCCACGGAGAAGTCGGTTC...TGCATCATAAGTATCAGTGCCTGTAGAGGTCAGAATAGGGTGTGGGATCCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTATCTCCTCTGCCAAAATCAGGCCTGGGTTTGGATGGAGGACCCAGCAAGATCTTTTTCAGGATGTaGGACAGGTCTTTGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLSPLPKSGLGLDGGPSKIFFRM*DRSLML Trigger: CAACATCAAAGACCTGTCCCACATCCTGAAAAAGAT...CTTGCTGGGTCCTCCATCCAAACCCAGGCCTGATTTTGGCAGAGGAGATAGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| CDS-3UTR CCA 90 bp | ACTCAAGAACCTTCATGGCTTCACACAACCATTTATAACTCTGGTTCCAGGGGACTCCCCTGCTCGGAATaGACAGTAAAGGTTGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TQEPSWLHTTIYNSGSRGLPCSE*TVKVVG Trigger: ACCTACAACCTTTACTGTCCATTCCGAGCAGGGGAG...TCCCCTGGAACCAGAGTTATAAATGGTTGTGTGAAGCCATGAAGGTTCTTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| CDS-3UTR CCA 90 bp | AGACTCAAGAACCTTCATGGCTTCACACAACCATTTATAACTCTGGTTCCAGGGAAATTGCCTCCAAGCTaGGAATGGGTTCTCTCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: RLKNLHGFTQPFITLVPGKLPPS*EWVLSV Trigger: AACGGAGAGAACCCATTCCCAGCTTGGAGGCAATTT...CCCTGGAACCAGAGTTATAAATGGTTGTGTGAAGCCATGAAGGTTCTTGAGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| CDS-3UTR TCA 90 bp | TTTATCATATGTAAGTACACTGTAACTGTCTTCAGACACACCAGAAGAGGACGTGTTGGAGTAAGGATGTaGGAAGAGCCTATGAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: FIICKYTVTVFRHTRRGRVGVRM*EEPMST Trigger: GGTGCTCATAGGCTCTTCTCACATCCTTACTCCAAC...ACGTCCTCTTCTGGTGTGTCTGAAGACAGTTACAGTGTACTTACATATGATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| CDS-3UTR TCA 90 bp | TTATTTATCATATGTAAGTACACTGTAACTGTCTTCAGACACACCAGAAGAGGAACACCCTCCAGCTTCTaGTCCAGTGTCTTGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LFIICKYTVTVFRHTRRGTPSSF*SSVLRS Trigger: TGACCTCAAGACACTGGATCAGAAGCTGGAGGGTGT...TCCTCTTCTGGTGTGTCTGAAGACAGTTACAGTGTACTTACATATGATAAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| CDS GCA 90 bp | CTAGAGGTCCCTGAGCCCGCGGAGTTGGTGACAGTGCCGCCCAGCTaGTCCAGATTCCGGATGAGGCTGCTGTACGACTGCACGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LEVPEPAELVTVPPS*SRFRMRLLYDCTLA Trigger: TGCCAACGTGCAGTCGTACAGCAGCCTCATCCGGAATCTGGAGCAGCTGGGCGGCACTGTCACCAACTCCGCGGGCTCAGGGACCTCTAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000160708.8 |
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| CDS CCA 90 bp | CTAGGCCCAGCCCGGGCCTCTACTCCAGCTTTGTTTTTGTGCCAGTaGCCAAAGCGAGCGCTGACAGCTGCCTGGGAGCTAGGCACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LGPARASTPALFLCQ*PKRALTAAWELGTG Trigger: CCCTGTGCCTAGCTCCCAGGCAGCTGTCAGCGCTCGCTTTGGCCACTGGCACAAAAACAAAGCTGGAGTAGAGGCCCGGGCTGGGCCTAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| CDS GCA 90 bp | ATGAGCCTAGGCCCAGCCCGGGCCTCTACTCCAGCTTTGTTTTTGTaGCAGTGGCCAAAGCGAGCGCTGACAGCTGCCTGGGAGCTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: MSLGPARASTPALFL*QWPKRALTAAWELG Trigger: GCCTAGCTCCCAGGCAGCTGTCAGCGCTCGCTTTGGCCACTGGCACAAAAACAAAGCTGGAGTAGAGGCCCGGGCTGGGCCTAGGCTCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| CDS CCA 90 bp | CTAGGCCCAGCCCGGGCCTCTACTCCAGCTTTGTTTTTGTGCCAGTaGCCAAAGCGAGCGCTGCTGACAGCTGCCTGGGAGCTAGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: LGPARASTPALFLCQ*PKRALLTAAWELGT Trigger: TGTGCCTAGCTCCCAGGCAGCTGTCAGCAGCGCTCGCTTTGGCCACTGGCACAAAAACAAAGCTGGAGTAGAGGCCCGGGCTGGGCCTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000159370.8 |
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| CDS-3UTR CAA 90 bp | GGGTTGCAGCCCTGGCAACCCCTAATCTGCACCTCTCTATCTCCTCTGCCAAAACCTGAGCCCGCGGAGTaGGTGACAGTGCCGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GLQPWQPLICTSLSPLPKPEPAE*VTVPPS Trigger: GCTGGGCGGCACTGTCACCAACTCCGCGGGCTCAGG...TTTTGGCAGAGGAGATAGAGAGGTGCAGATTAGGGGTTGCCAGGGCTGCAACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| CDS GCA 90 bp | GTGCCGCCCAGCTGCTCCAGATTCCGGATGAGGCTGCTGTACGACTaGACGTTGGCATGCTGGATCAGCTTGGCCAGGTTCTCCTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: VPPSCSRFRMRLLYD*TLACWISLARFSSL Trigger: GAGTGAGGAGAACCTGGCCAAGCTGATCCAGCATGCCAACGTGCAGTCGTACAGCAGCCTCATCCGGAATCTGGAGCAGCTGGGCGGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000160708.8 |
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| CDS GCA 90 bp | ATGAGCCTAGGCCCAGCCCGGGCCTCTACTCCAGCTTTGTTTTTGTaGCAGTGGCCAAAGCGAGCGCTGCTGACAGCTGCCTGGGAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: MSLGPARASTPALFL*QWPKRALLTAAWEL Trigger: TAGCTCCCAGGCAGCTGTCAGCAGCGCTCGCTTTGGCCACTGGCACAAAAACAAAGCTGGAGTAGAGGCCCGGGCTGGGCCTAGGCTCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000159370.8 |
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| CDS CCA 90 bp | TTGTTTTTGTGCCAGTGGCCAAAGCGAGCGCTGCTGACAGCTGCCTaGGAGCTAGGCACAGGGGCAGGGTCAGACACAAAGGGCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LFLCQWPKRALLTAA*ELGTGAGSDTKGHS Trigger: GCTGTGGCCCTTTGTGTCTGACCCTGCCCCTGTGCCTAGCTCCCAGGCAGCTGTCAGCAGCGCTCGCTTTGGCCACTGGCACAAAAACAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000159370.8 |
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| CDS CCA 90 bp | CCGCAGAAGGATGTAGAGCAACAGAACCCGGATCTTGTCGTAGGGTaGCACCGAGGCATCCAGCAGCACCGGGACAATCAGCTTCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: PQKDVEQQNPDLVVG*HRGIQQHRDNQLHG Trigger: GCCATGAAGCTGATTGTCCCGGTGCTGCTGGATGCCTCGGTGCCACCCTACGACAAGATCCGGGTTCTGTTGCTCTACATCCTTCTGCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000160708.8 |
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| CDS CCA 90 bp | TCCAGATTCCGGATGAGGCTGCTGTACGACTGCACGTTGGCATGCTaGATCAGCTTGGCCAGGTTCTCCTCACTCACCCCATTCCGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SRFRMRLLYDCTLAC*ISLARFSSLTPFRR Trigger: TCTGCGGAATGGGGTGAGTGAGGAGAACCTGGCCAAGCTGATCCAGCATGCCAACGTGCAGTCGTACAGCAGCCTCATCCGGAATCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000160708.8 |
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| CDS-3UTR CAA 90 bp | GGGCAGGACAGTGAAAACGCAGGGGGAGGTCTGGCTCAATACAGCTCCCTCTGGGCCTCTACTCCAGCTTaGTTTTTGTGCCAGTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GQDSENAGGGLAQYSSLWASTPA*FLCQWP Trigger: TGGCCACTGGCACAAAAACAAAGCTGGAGTAGAGGC...CCAGAGGGAGCTGTATTGAGCCAGACCTCCCCCTGCGTTTTCACTGTCCTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| CDS-3UTR CAA 90 bp | AGGACGTCAGATGTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATATGAGCACCTCCCACTaGCCCTCAGTGGCCCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RTSDVITDGCEPPCGCWDMSTSH*PSVALV Trigger: GACCAGGGCCACTGAGGGCAAGTGGGAGGTGCTCAT...ATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGACATCTGACGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| CDS TCA 90 bp | TGTCCTGTTCGATGTCCAGAAGATCATAGGCCATGGCTTGGAACGTaGGTTCGTGTAATAGTGGGGACACGGGGTCTGCTGCCCGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CPVRCPEDHRPWLGT*VRVIVGTRGLLPGP Trigger: TGGACCGGGCAGCAGACCCCGTGTCCCCACTATTACACGAACTCACGTTCCAAGCCATGGCCTATGATCTTCTGGACATCGAACAGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000160708.8 |
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| CDS CCA 90 bp | CTCCAGCTTCTGATCCAGTGTCTTGAGGTCATCGAGGAAGCGGGTTaGAGTAAGGATGTGAGAAGAGCCTATGAGCACCTCCCACTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LQLLIQCLEVIEEAG*SKDVRRAYEHLPLA Trigger: GGCAAGTGGGAGGTGCTCATAGGCTCTTCTCACATCCTTACTCCAACCCGCTTCCTCGATGACCTCAAGACACTGGATCAGAAGCTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004745.9 ENSMUST00000159370.8 ENSMUST00000160708.8 |
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| CDS-3UTR CAA 90 bp | TCTCTATCTCCTCTGCCAAAATCAGGCCTGGGTTTGGATGGAGGACCCAGCAAGCTGTACGACTGCACGTaGGCATGCTGGATCAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLSPLPKSGLGLDGGPSKLYDCT*ACWISL Trigger: CAAGCTGATCCAGCATGCCAACGTGCAGTCGTACAG...CTTGCTGGGTCCTCCATCCAAACCCAGGCCTGATTTTGGCAGAGGAGATAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| CDS GCA 90 bp | AGGTCCTGCTCCACACTGCACAGCTTCTCCACCGAGCCCTTGAAATaGTTCATGCAGTCATCTGCCAAATGCAGGTGCGTAGAGTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: RSCSTLHSFSTEPLK*FMQSSAKCRCVEYL Trigger: CAAGTACTCTACGCACCTGCATTTGGCAGATGACTGCATGAAGCATTTCAAGGGCTCGGTGGAGAAGCTGTGCAGTGTGGAGCAGGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000160708.8 |
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| CDS-3UTR CAA 90 bp | GGGTTGCAGCCCTGGCAACCCCTAATCTGCACCTCTCTATCTCCTCTGCCAAAATCTTTGATGTTGGCCTaGTCTGTGGTCAGCCTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: GLQPWQPLICTSLSPLPKSLMLA*SVVSLL Trigger: TAAGAGGCTGACCACAGACAAGGCCAACATCAAAGA...TTTTGGCAGAGGAGATAGAGAGGTGCAGATTAGGGGTTGCCAGGGCTGCAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| CDS-3UTR CAA 90 bp | ACAGTGAAAACGCAGGGGGAGGTCTGGCTCAATACAGCTCCCTCTGGGAAGAAAATGTGGGACAGGTCTTaGATGTTGGCCTTGTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TVKTQGEVWLNTAPSGKKMWDRS*MLALSV Trigger: CACAGACAAGGCCAACATCAAAGACCTGTCCCACAT...TTTCTTCCCAGAGGGAGCTGTATTGAGCCAGACCTCCCCCTGCGTTTTCACTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| CDS-3UTR CAA 90 bp | ACAGTGAAAACGCAGGGGGAGGTCTGGCTCAATACAGCTCCCTCTGGGAAGAAAATGGGTTCTCTCCGTTaGTTGATGTCTTCCACGATG | + |
|
Preference number: 5 (lower is better) Translates to: TVKTQGEVWLNTAPSGKKMGSLR*LMSSTM Trigger: CATCGTGGAAGACATCAACAAACGGAGAGAACCCAT...TTTCTTCCCAGAGGGAGCTGTATTGAGCCAGACCTCCCCCTGCGTTTTCACTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| CDS-3UTR CAA 90 bp | CAGGATTCAGGTCTACTCTATTTCCGTTTCTATTTCTGGTGCTGGAGATGCATCCTGGGAGTGTCTGCCTaGAAGGCGTTCAGCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QDSGLLYFRFYFWCWRCILGVSA*KAFSLA Trigger: GGCCAAGCTGAACGCCTTCAAGGCAGACACTCCCAG...GATGCATCTCCAGCACCAGAAATAGAAACGGAAATAGAGTAGACCTGAATCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| CDS GCA 90 bp | GCACAGCTTCTCCACCGAGCCCTTGAAATGCTTCATGCAGTCATCTaGCAAATGCAGGTGCGTAGAGTACTTGTTCAGCTCCTTCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: AQLLHRALEMLHAVI*QMQVRRVLVQLLLI Trigger: TATCAGAAGGAGCTGAACAAGTACTCTACGCACCTGCATTTGGCAGATGACTGCATGAAGCATTTCAAGGGCTCGGTGGAGAAGCTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000160708.8 |
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| CDS-3UTR CAA 90 bp | CTTGCGGTATCGGATGGATGGGTATTCCTGAAGAGTGGCACACAGTGTGGCTATATGGGTTCTCTCCGTTaGTTGATGTCTTCCACGACT | + |
|
Preference number: 5 (lower is better) Translates to: LAVSDGWVFLKSGTQCGYMGSLR*LMSSTT Trigger: AGTCGTGGAAGACATCAACAAACGGAGAGAACCCAT...ATAGCCACACTGTGTGCCACTCTTCAGGAATACCCATCCATCCGATACCGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162867.8 |
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| CDS TCA 90 bp | GCAAATAAATTGCCTCCAAGCTGGGAATGGGTTCTCTCCGTTTGTTaGTGTCTTCCACGACTCAGATTCATCCACTCACTGGTGATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ANKLPPSWEWVLSVC*CLPRLRFIHSLVMP Trigger: GGGCATCACCAGTGAGTGGATGAATCTGAGTCGTGGAAGACATCAACAAACGGAGAGAACCCATTCCCAGCTTGGAGGCAATTTATTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159911.8 |
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| CDS GCA 90 bp | TTCAGGAGTTCTGTGACCTTCTTGGAAACATCTGCTATGTGCATGTaGCGAAGTTCCACCCACAGGTCATCATCTTCATCCAGGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: FRSSVTFLETSAMCM*RSSTHRSSSSSRRT Trigger: TGTCCTCCTGGATGAAGATGATGACCTGTGGGTGGAACTTCGGCACATGCACATAGCAGATGTTTCCAAGAAGGTCACAGAACTCCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000160708.8 |
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| CDS GCA 90 bp | ACTGGGGAGGAGAGATTACTTCTCCGTGGGACTCAGCAAATAAATTaGCTCCAAGCTGGGAATGGGTTCTCTCCGTTTGTTGATGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TGEERLLLRGTQQIN*LQAGNGFSPFVDVF Trigger: GAAGACATCAACAAACGGAGAGAACCCATTCCCAGCTTGGAGGCAATTTATTTGCTGAGTCCCACGGAGAAGTAATCTCTCCTCCCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159911.8 |
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| CDS-3UTR CAA 90 bp | AGCTGTTCTCACAGCAGACTCAAGAACCTTCATGGCTTCACACAACCATTTATAGCATGCTGGATCAGCTaGGCCAGGTTCTCCTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: SCSHSRLKNLHGFTQPFIACWIS*ARFSSL Trigger: GAGTGAGGAGAACCTGGCCAAGCTGATCCAGCATGC...TATAAATGGTTGTGTGAAGCCATGAAGGTTCTTGAGTCTGCTGTGAGAACAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| CDS TCA 90 bp | CCGTTTGTTGATGTCTTCCACGACTCAGATTCATCCACTCACTGGTaGTGCCCTCCGCCAGGATATCTGACATTTTACAACAGGATGACA | + |
|
Preference number: 5 (lower is better) Translates to: PFVDVFHDSDSSTHW*CPPPGYLTFYNRMT Trigger: TGTCATCCTGTTGTAAAATGTCAGATATCCTGGCGGAGGGCATCACCAGTGAGTGGATGAATCTGAGTCGTGGAAGACATCAACAAACGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159911.8 |
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| CDS GCA 90 bp | AATGTCTTCAGGAGTTCTGTGACCTTCTTGGAAACATCTGCTATGTaGATGTGCCGAAGTTCCACCCACAGGTCATCATCTTCATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NVFRSSVTFLETSAM*MCRSSTHRSSSSSR Trigger: CCTGGATGAAGATGATGACCTGTGGGTGGAACTTCGGCACATGCACATAGCAGATGTTTCCAAGAAGGTCACAGAACTCCTGAAGACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000160708.8 |
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| CDS GCA 90 bp | CTCACAGAATGTCTTCAGGAGTTCTGTGACCTTCTTGGAAACATCTaGTATGTGCATGTGCCGAAGTTCCACCCACAGGTCATCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LTECLQEFCDLLGNI*YVHVPKFHPQVIIF Trigger: GAAGATGATGACCTGTGGGTGGAACTTCGGCACATGCACATAGCAGATGTTTCCAAGAAGGTCACAGAACTCCTGAAGACATTCTGTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000160708.8 |
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| CDS-3UTR CAA 90 bp | CAGGATTCAGGTCTACTCTATTTCCGTTTCTATTTCTGGTGCTGGAGATGCATCTTCTCCACCGAGCCCTaGAAATGCTTCATGCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QDSGLLYFRFYFWCWRCIFSTEP*KCFMQS Trigger: TGACTGCATGAAGCATTTCAAGGGCTCGGTGGAGAA...GATGCATCTCCAGCACCAGAAATAGAAACGGAAATAGAGTAGACCTGAATCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| CDS-3UTR CAA 90 bp | ATCATATGTAAGTACACTGTAACTGTCTTCAGACACACCAGAAGAGGACGTCAGAGCTTCATGGCGTCCTaGATCTTCTCACCCTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: IICKYTVTVFRHTRRGRQSFMAS*IFSPSA Trigger: TGCAGAGGGTGAGAAGATCAAGGACGCCATGAAGCT...CTGACGTCCTCTTCTGGTGTGTCTGAAGACAGTTACAGTGTACTTACATATGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| CDS GCA 72 bp | GGCCCAGCCCGGGCCTCTACTCCAGCTTTGTTTTTGTaGCAGTGGCCAAAGCGAGCGCTGCTGACAGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GPARASTPALFL*QWPKRALLTAA Trigger: GGCAGCTGTCAGCAGCGCTCGCTTTGGCCACTGGCACAAAAACAAAGCTGGAGTAGAGGCCCGGGCTGGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000159370.8 |
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| CDS GCA 72 bp | GGCCCAGCCCGGGCCTCTACTCCAGCTTTGTTTTTGTaGCAGTGGCCAAAGCGAGCGCTGACAGCTGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GPARASTPALFL*QWPKRALTAAW Trigger: CCAGGCAGCTGTCAGCGCTCGCTTTGGCCACTGGCACAAAAACAAAGCTGGAGTAGAGGCCCGGGCTGGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| CDS CCA 72 bp | GCCCGGGCCTCTACTCCAGCTTTGTTTTTGTGCCAGTaGCCAAAGCGAGCGCTGCTGACAGCTGCCTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ARASTPALFLCQ*PKRALLTAAWE Trigger: CTCCCAGGCAGCTGTCAGCAGCGCTCGCTTTGGCCACTGGCACAAAAACAAAGCTGGAGTAGAGGCCCGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000159370.8 |
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| CDS CAA 72 bp | CTAGGCCCAGCCCGGGCCTCTACTCCAGCTTTGTTTTaGTGCCAGTGGCCAAAGCGAGCGCTGACAGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LGPARASTPALF*CQWPKRALTAA Trigger: GGCAGCTGTCAGCGCTCGCTTTGGCCACTGGCACAAAAACAAAGCTGGAGTAGAGGCCCGGGCTGGGCCTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
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| CDS CCA 72 bp | GCCCGGGCCTCTACTCCAGCTTTGTTTTTGTGCCAGTaGCCAAAGCGAGCGCTGACAGCTGCCTGGGAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: ARASTPALFLCQ*PKRALTAAWEL Trigger: TAGCTCCCAGGCAGCTGTCAGCGCTCGCTTTGGCCACTGGCACAAAAACAAAGCTGGAGTAGAGGCCCGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS CAA 72 bp | CTAGGCCCAGCCCGGGCCTCTACTCCAGCTTTGTTTTaGTGCCAGTGGCCAAAGCGAGCGCTGCTGACAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LGPARASTPALF*CQWPKRALLTA Trigger: AGCTGTCAGCAGCGCTCGCTTTGGCCACTGGCACAAAAACAAAGCTGGAGTAGAGGCCCGGGCTGGGCCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000159370.8 |
||
| CDS CAA 90 bp | CCCAGCTGCTCCAGATTCCGGATGAGGCTGCTGTACGACTGCACGTaGGCATGCTGGATCAGCTTGGCCAGGTTCTCCTCACTCACCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PSCSRFRMRLLYDCT*ACWISLARFSSLTP Trigger: TGGGGTGAGTGAGGAGAACCTGGCCAAGCTGATCCAGCATGCCAACGTGCAGTCGTACAGCAGCCTCATCCGGAATCTGGAGCAGCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000160708.8 |
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| CDS CAA 90 bp | ATGTACACGATGAGCCTAGGCCCAGCCCGGGCCTCTACTCCAGCTTaGTTTTTGTGCCAGTGGCCAAAGCGAGCGCTGCTGACAGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: MYTMSLGPARASTPA*FLCQWPKRALLTAA Trigger: GGCAGCTGTCAGCAGCGCTCGCTTTGGCCACTGGCACAAAAACAAAGCTGGAGTAGAGGCCCGGGCTGGGCCTAGGCTCATCGTGTACAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000159370.8 |
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| CDS CAA 90 bp | ATGTACACGATGAGCCTAGGCCCAGCCCGGGCCTCTACTCCAGCTTaGTTTTTGTGCCAGTGGCCAAAGCGAGCGCTGACAGCTGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: MYTMSLGPARASTPA*FLCQWPKRALTAAW Trigger: CCAGGCAGCTGTCAGCGCTCGCTTTGGCCACTGGCACAAAAACAAAGCTGGAGTAGAGGCCCGGGCTGGGCCTAGGCTCATCGTGTACAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160708.8 |
||
| CDS GCA 72 bp | AGCTGCTCCAGATTCCGGATGAGGCTGCTGTACGACTaGACGTTGGCATGCTGGATCAGCTTGGCCAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SCSRFRMRLLYD*TLACWISLARF Trigger: GAACCTGGCCAAGCTGATCCAGCATGCCAACGTGCAGTCGTACAGCAGCCTCATCCGGAATCTGGAGCAGCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000160708.8 |
||
| CDS CCA 72 bp | GATGTAGAGCAACAGAACCCGGATCTTGTCGTAGGGTaGCACCGAGGCATCCAGCAGCACCGGGACAATCAG | + |
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Preference number: 6 (lower is better) Translates to: DVEQQNPDLVVG*HRGIQQHRDNQ Trigger: CTGATTGTCCCGGTGCTGCTGGATGCCTCGGTGCCACCCTACGACAAGATCCGGGTTCTGTTGCTCTACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000160708.8 |
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| CDS CAA 72 bp | CTGCTGTACGACTGCACGTTGGCATGCTGGATCAGCTaGGCCAGGTTCTCCTCACTCACCCCATTCCGCAGA | + |
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Preference number: 6 (lower is better) Translates to: LLYDCTLACWIS*ARFSSLTPFRR Trigger: TCTGCGGAATGGGGTGAGTGAGGAGAACCTGGCCAAGCTGATCCAGCATGCCAACGTGCAGTCGTACAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000160708.8 |
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| CDS TCA 72 bp | AAGGTTGGTGTTCCCTGGAAGTCCGCAATCAGGGCCTaGACCGACTGGGGAGGAGAGATTACTTCTCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: KVGVPWKSAIRA*TDWGGEITSPW Trigger: CCACGGAGAAGTAATCTCTCCTCCCCAGTCGGTTCAGGCCCTGATTGCGGACTTCCAGGGAACACCAACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159911.8 |
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| CDS CCA 72 bp | GGAGGACAGCCTTCTCCCGGGACTCACTCAGCCCTGTaGTCTCATACCTGTATGTGTCCTGTTCGATGTCCA | + |
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Preference number: 6 (lower is better) Translates to: GGQPSPGTHSAL*SHTCMCPVRCP Trigger: TGGACATCGAACAGGACACATACAGGTATGAGACCACAGGGCTGAGTGAGTCCCGGGAGAAGGCTGTCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000160708.8 |
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| CDS CAA 90 bp | ATGGCCAGGTCCTGCTCCACACTGCACAGCTTCTCCACCGAGCCCTaGAAATGCTTCATGCAGTCATCTGCCAAATGCAGGTGCGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: MARSCSTLHSFSTEP*KCFMQSSAKCRCVE Trigger: CTCTACGCACCTGCATTTGGCAGATGACTGCATGAAGCATTTCAAGGGCTCGGTGGAGAAGCTGTGCAGTGTGGAGCAGGACCTGGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000160708.8 |
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| CDS TCA 72 bp | CGATGTCCAGAAGATCATAGGCCATGGCTTGGAACGTaGGTTCGTGTAATAGTGGGGACACGGGGTCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: RCPEDHRPWLGT*VRVIVGTRGLL Trigger: CAGCAGACCCCGTGTCCCCACTATTACACGAACTCACGTTCCAAGCCATGGCCTATGATCTTCTGGACATCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000160708.8 |
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| CDS TCA 72 bp | CCTGCTCCACACTGCACAGCTTCTCCACCGAGCCCTTaGAATGCTTCATGCAGTCATCTGCCAAATGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: PAPHCTASPPSP*NASCSHLPNAG Trigger: ACCTGCATTTGGCAGATGACTGCATGAAGCATTTCAAGGGCTCGGTGGAGAAGCTGTGCAGTGTGGAGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000160708.8 |
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| CDS CAA 72 bp | TCCTGCTCCACACTGCACAGCTTCTCCACCGAGCCCTaGAAATGCTTCATGCAGTCATCTGCCAAATGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SCSTLHSFSTEP*KCFMQSSAKCR Trigger: CCTGCATTTGGCAGATGACTGCATGAAGCATTTCAAGGGCTCGGTGGAGAAGCTGTGCAGTGTGGAGCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000160708.8 |
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| CDS GCA 72 bp | TCCACACTGCACAGCTTCTCCACCGAGCCCTTGAAATaGTTCATGCAGTCATCTGCCAAATGCAGGTGCGTA | + |
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Preference number: 6 (lower is better) Translates to: STLHSFSTEPLK*FMQSSAKCRCV Trigger: TACGCACCTGCATTTGGCAGATGACTGCATGAAGCATTTCAAGGGCTCGGTGGAGAAGCTGTGCAGTGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000160708.8 |
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| CDS CCA 72 bp | CTGATCCAGTGTCTTGAGGTCATCGAGGAAGCGGGTTaGAGTAAGGATGTGAGAAGAGCCTATGAGCACCTC | + |
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Preference number: 6 (lower is better) Translates to: LIQCLEVIEEAG*SKDVRRAYEHL Trigger: GAGGTGCTCATAGGCTCTTCTCACATCCTTACTCCAACCCGCTTCCTCGATGACCTCAAGACACTGGATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004745.9 ENSMUST00000159370.8 ENSMUST00000160708.8 |
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| CDS TCA 72 bp | TTGCCTCCAAGCTGGGAATGGGTTCTCTCCGTTTGTTaGTGTCTTCCACGACTTCCACTCGCCATCCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LPPSWEWVLSVC*CLPRLPLAILL Trigger: AAGAAGGATGGCGAGTGGAAGTCGTGGAAGACATCAACAAACGGAGAGAACCCATTCCCAGCTTGGAGGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162867.8 |
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| CDS GCA 72 bp | CTCCACCGAGCCCTTGAAATGCTTCATGCAGTCATCTaGCAAATGCAGGTGCGTAGAGTACTTGTTCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: LHRALEMLHAVI*QMQVRRVLVQL Trigger: GAGCTGAACAAGTACTCTACGCACCTGCATTTGGCAGATGACTGCATGAAGCATTTCAAGGGCTCGGTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000160708.8 |
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| CDS CAA 72 bp | ATTGCCTCCAAGCTGGGAATGGGTTCTCTCCGTTTGTaGATGTCTTCCACGACTTCCACTCGCCATCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: IASKLGMGSLRL*MSSTTSTRHPS Trigger: AGAAGGATGGCGAGTGGAAGTCGTGGAAGACATCAACAAACGGAGAGAACCCATTCCCAGCTTGGAGGCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162867.8 |
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| CDS GCA 72 bp | TGTCTTCAGGAGTTCTGTGACCTTCTTGGAAACATCTaGTATGTGCATGTGCCGAAGTTCCACCCACAGGTC | + |
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Preference number: 6 (lower is better) Translates to: CLQEFCDLLGNI*YVHVPKFHPQV Trigger: GACCTGTGGGTGGAACTTCGGCACATGCACATAGCAGATGTTTCCAAGAAGGTCACAGAACTCCTGAAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000160708.8 |
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| CDS GCA 72 bp | TCTGTGACCTTCTTGGAAACATCTGCTATGTGCATGTaGCGAAGTTCCACCCACAGGTCATCATCTTCATCC | + |
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Preference number: 6 (lower is better) Translates to: SVTFLETSAMCM*RSSTHRSSSSS Trigger: GGATGAAGATGATGACCTGTGGGTGGAACTTCGGCACATGCACATAGCAGATGTTTCCAAGAAGGTCACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000160708.8 |
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| CDS GCA 72 bp | AGGAGTTCTGTGACCTTCTTGGAAACATCTGCTATGTaGATGTGCCGAAGTTCCACCCACAGGTCATCATCT | + |
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Preference number: 6 (lower is better) Translates to: RSSVTFLETSAM*MCRSSTHRSSS Trigger: AGATGATGACCTGTGGGTGGAACTTCGGCACATGCACATAGCAGATGTTTCCAAGAAGGTCACAGAACTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004745.9 ENSMUST00000160708.8 |
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| CDS CAA 72 bp | ATTGCCTCCAAGCTGGGAATGGGTTCTCTCCGTTTGTaGATGTCTTCCACGACTCAGATTCATCCACTCACT | + |
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Preference number: 6 (lower is better) Translates to: IASKLGMGSLRL*MSSTTQIHPLT Trigger: AGTGAGTGGATGAATCTGAGTCGTGGAAGACATCAACAAACGGAGAGAACCCATTCCCAGCTTGGAGGCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159911.8 |
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