Pregenerated sensors for STX8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020903Ensembl transcript IDs: ENSMUST00000021285.14, ENSMUST00000021286.11, ENSMUST00000108675.2
Found 194 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGGGCATGCCTGGCTGCTTTGGATGGTGCGGGGAAAGCCATCTTTaGGGAAGACTGCCTGGGGATGAGTCTCCCTGCCTGCAGTGCCCA | + |
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Preference number: 1 (lower is better) Translates to: LGMPGCFGWCGESHL*GRLPGDESPCLQCP Trigger: TGGGCACTGCAGGCAGGGAGACTCATCCCCAGGCAGTCTTCCTCAAAGATGGCTTTCCCCGCACCATCCAAAGCAGCCAGGCATGCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR GCA 90 bp | CTGGCTGCTTTGGATGGTGCGGGGAAAGCCATCTTTGAGGAAGACTaGCTGGGGATGAGTCTCCCTGCCTGCAGTGCCCACGGTCCTCAC | + |
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Preference number: 1 (lower is better) Translates to: LAALDGAGKAIFEED*LGMSLPACSAHGPH Trigger: GTGAGGACCGTGGGCACTGCAGGCAGGGAGACTCATCCCCAGGCAGTCTTCCTCAAAGATGGCTTTCCCCGCACCATCCAAAGCAGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR CCA 90 bp | CACTCTACAGGAGCTGTCCCCTGGGCTTTGAAGCAGCAGGCTCTCTaGTACACCCCACTCAGCTGGGCATGCCTGGCTGCTTTGGATGGT | + |
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Preference number: 1 (lower is better) Translates to: HSTGAVPWALKQQAL*YTPLSWACLAALDG Trigger: ACCATCCAAAGCAGCCAGGCATGCCCAGCTGAGTGGGGTGTACCAGAGAGCCTGCTGCTTCAAAGCCCAGGGGACAGCTCCTGTAGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR GCA 90 bp | TGCCCACGGTCCTCACACCATGAACCTCTCAGGCAGCTTTCCTCCTaGGCTCCCCTGCCCATGGTATACAGAAGGGAAGGAACTTGTCCG | + |
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Preference number: 1 (lower is better) Translates to: CPRSSHHEPLRQLSS*APLPMVYRREGTCP Trigger: CGGACAAGTTCCTTCCCTTCTGTATACCATGGGCAGGGGAGCGCAGGAGGAAAGCTGCCTGAGAGGTTCATGGTGTGAGGACCGTGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR GCA 90 bp | GGACACTTCACTGCTGGCCTGAGAGCTCCCAGAAACCCTTTGCTGTaGCACAGAGACCCCATTGCTGTCCTGCCTGTCTGCATTCTGGTA | + |
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Preference number: 1 (lower is better) Translates to: GHFTAGLRAPRNPLL*HRDPIAVLPVCILV Trigger: TACCAGAATGCAGACAGGCAGGACAGCAATGGGGTCTCTGTGGCACAGCAAAGGGTTTCTGGGAGCTCTCAGGCCAGCAGTGAAGTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR GCA 90 bp | GAGGCCAGGGTAAGTAGTTCAGCCAGAACTCGAGCTGAGGTGATGTaGTCTCGAGATGGACACTTCACTGCTGGCCTGAGAGCTCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: EARVSSSARTRAEVM*SRDGHFTAGLRAPR Trigger: TCTGGGAGCTCTCAGGCCAGCAGTGAAGTGTCCATCTCGAGAGCACATCACCTCAGCTCGAGTTCTGGCTGAACTACTTACCCTGGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR GCA 90 bp | GGTCACTGGTTCCAGAACGCTCACAGCAGGTCACTGGTTCCAGAATaGTCACAGCAGGTCACTGGTTCCAGAACGCTCACAGCAGGTCAC | + |
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Preference number: 1 (lower is better) Translates to: GHWFQNAHSRSLVPE*SQQVTGSRTLTAGH Trigger: GTGACCTGCTGTGAGCGTTCTGGAACCAGTGACCTGCTGTGAGCATTCTGGAACCAGTGACCTGCTGTGAGCGTTCTGGAACCAGTGACC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR TCA 90 bp | GCAGACATGGGCCAGTGTCTTCCTGAAAAGGGCTTTCAGTGCAACTaGGCCAGGCCTTCGTGGCTCTGGTTCAAAGTGTCCCACGAGTTG | + |
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Preference number: 1 (lower is better) Translates to: ADMGQCLPEKGFQCN*ARPSWLWFKVSHEL Trigger: CAACTCGTGGGACACTTTGAACCAGAGCCACGAAGGCCTGGCTCAGTTGCACTGAAAGCCCTTTTCAGGAAGACACTGGCCCATGTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR TCA 90 bp | TGGTATACAGAAGGGAAGGAACTTGTCCGGGGTCACACAATGCCCTaGCTGGGCCTAGAGCCCATTCGGCCAGAAGAACAGAAGCCACTG | + |
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Preference number: 1 (lower is better) Translates to: WYTEGKELVRGHTMP*LGLEPIRPEEQKPL Trigger: CAGTGGCTTCTGTTCTTCTGGCCGAATGGGCTCTAGGCCCAGTCAGGGCATTGTGTGACCCCGGACAAGTTCCTTCCCTTCTGTATACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR GCA 90 bp | ATGGCTTCAGAGCCAGTGGAGAGGCTGGACGGAGGCAGCACTTCCTaGTTTATAACCAGGCTTTCCTCTGACTGCTCCCTCCCTCAAGAT | + |
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Preference number: 1 (lower is better) Translates to: MASEPVERLDGGSTS*FITRLSSDCSLPQD Trigger: ATCTTGAGGGAGGGAGCAGTCAGAGGAAAGCCTGGTTATAAAGCAGGAAGTGCTGCCTCCGTCCAGCCTCTCCACTGGCTCTGAAGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR GCA 90 bp | GCATGCAGAGTCCTGATGCCATCCCCAGCACCACACAAAACTGGGTaGACCGGAGTATGCCTTTACCTGAGTTCTCAGGATGTGAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: ACRVLMPSPAPHKTG*TGVCLYLSSQDVRA Trigger: TGCCCTCACATCCTGAGAACTCAGGTAAAGGCATACTCCGGTGCACCCAGTTTTGTGTGGTGCTGGGGATGGCATCAGGACTCTGCATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108675.2 |
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| 3UTR TCA 90 bp | AGAAGAACAGAAGCCACTGTGTGCAGACATGGGCCAGTGTCTTCCTaGAAAGGGCTTTCAGTGCAACTGAGCCAGGCCTTCGTGGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: RRTEATVCRHGPVSS*KGLSVQLSQAFVAL Trigger: CAGAGCCACGAAGGCCTGGCTCAGTTGCACTGAAAGCCCTTTTCAGGAAGACACTGGCCCATGTCTGCACACAGTGGCTTCTGTTCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR GCA 90 bp | GGTCACTGGTTCCAGAATGCTCACAGCAGGTCACTGGTTCCAGAATaGTCACAGCAGGTCACTGGTTCCAGAATGCTCACAGCAGGTCAC | + |
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Preference number: 1 (lower is better) Translates to: GHWFQNAHSRSLVPE*SQQVTGSRMLTAGH Trigger: GTGACCTGCTGTGAGCATTCTGGAACCAGTGACCTGCTGTGAGCATTCTGGAACCAGTGACCTGCTGTGAGCATTCTGGAACCAGTGACC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR GCA 90 bp | CTGATGCCATCCCCAGCACCACACAAAACTGGGTGCACCGGAGTATaGCTTTACCTGAGTTCTCAGGATGTGAGGGCAGAGGTTTGGCTA | + |
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Preference number: 1 (lower is better) Translates to: LMPSPAPHKTGCTGV*LYLSSQDVRAEVWL Trigger: TAGCCAAACCTCTGCCCTCACATCCTGAGAACTCAGGTAAAGGCATACTCCGGTGCACCCAGTTTTGTGTGGTGCTGGGGATGGCATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108675.2 |
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| 3UTR CCA 90 bp | TGCTCACAGCAGGTCACTGGTTCCAGAATGCTCACAGCAGGTCACTaGTTCCAGAATGCTCACAGCAGGTCACTGGTTCCAGAACGCTCA | + |
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Preference number: 1 (lower is better) Translates to: CSQQVTGSRMLTAGH*FQNAHSRSLVPERS Trigger: TGAGCGTTCTGGAACCAGTGACCTGCTGTGAGCATTCTGGAACCAGTGACCTGCTGTGAGCATTCTGGAACCAGTGACCTGCTGTGAGCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR CCA 90 bp | CGCTCACAGCAGGTCACTGGTTCCAGAATGCTCACAGCAGGTCACTaGTTCCAGAATGCTCACAGCAGGTCACTGGTTCCAGAATGCTCA | + |
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Preference number: 1 (lower is better) Translates to: RSQQVTGSRMLTAGH*FQNAHSRSLVPECS Trigger: TGAGCATTCTGGAACCAGTGACCTGCTGTGAGCATTCTGGAACCAGTGACCTGCTGTGAGCATTCTGGAACCAGTGACCTGCTGTGAGCG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR CCA 90 bp | GCTAGCATGCAGAGTCCTGATGCCATCCCCAGCACCACACAAAACTaGGTGCACCGGAGTATGCCTTTACCTGAGTTCTCAGGATGTGAG | + |
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Preference number: 1 (lower is better) Translates to: ASMQSPDAIPSTTQN*VHRSMPLPEFSGCE Trigger: CTCACATCCTGAGAACTCAGGTAAAGGCATACTCCGGTGCACCCAGTTTTGTGTGGTGCTGGGGATGGCATCAGGACTCTGCATGCTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108675.2 |
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| 3UTR CCA 90 bp | CAAGACATCCCAAGGAATGAGAGACTGCTCAGTCGGGGGAGCATTTaGCTAGCATGCAGAGTCCTGATGCCATCCCCAGCACCACACAAA | + |
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Preference number: 1 (lower is better) Translates to: QDIPRNERLLSRGSI*LACRVLMPSPAPHK Trigger: TTTGTGTGGTGCTGGGGATGGCATCAGGACTCTGCATGCTAGCCAAATGCTCCCCCGACTGAGCAGTCTCTCATTCCTTGGGATGTCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108675.2 |
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| 3UTR TCA 90 bp | GCTGGACGGAGGCAGCACTTCCTGCTTTATAACCAGGCTTTCCTCTaGCTGCTCCCTCCCTCAAGATCTAAGGCTGTGGGCTACTTAGAA | + |
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Preference number: 1 (lower is better) Translates to: AGRRQHFLLYNQAFL*LLPPSRSKAVGYLE Trigger: TTCTAAGTAGCCCACAGCCTTAGATCTTGAGGGAGGGAGCAGTCAGAGGAAAGCCTGGTTATAAAGCAGGAAGTGCTGCCTCCGTCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR TCA 90 bp | CCAACCTGGTCTACACAGAGTTCCAGATGTTCTAGGTCTACGCAGTaGGACCCTGGCTCAGAAAAGGAGGAGGACAGGGAGGTACAAAGC | + |
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Preference number: 1 (lower is better) Translates to: PTWSTQSSRCSRSTQ*DPGSEKEEDREVQS Trigger: GCTTTGTACCTCCCTGTCCTCCTCCTTTTCTGAGCCAGGGTCTCACTGCGTAGACCTAGAACATCTGGAACTCTGTGTAGACCAGGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021286.11 |
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| 3UTR GCA 90 bp | ACCAACAAAATCACTGACAGAAGACAGGGGACACAACTGGGCCAGTaGTCTAGGAAGGTCTCCAGAGCTGCTCAGCTCTGTTCTCTACCC | + |
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Preference number: 1 (lower is better) Translates to: TNKITDRRQGTQLGQ*SRKVSRAAQLCSLP Trigger: GGGTAGAGAACAGAGCTGAGCAGCTCTGGAGACCTTCCTAGAGCACTGGCCCAGTTGTGTCCCCTGTCTTCTGTCAGTGATTTTGTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR GCA 90 bp | CCTGAGAGCTCCCAGAAACCCTTTGCTGTGCCACAGAGACCCCATTaGTGTCCTGCCTGTCTGCATTCTGGTATGAGTCAGAGTCAAACA | + |
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Preference number: 1 (lower is better) Translates to: PESSQKPFAVPQRPH*CPACLHSGMSQSQT Trigger: TGTTTGACTCTGACTCATACCAGAATGCAGACAGGCAGGACAGCAATGGGGTCTCTGTGGCACAGCAAAGGGTTTCTGGGAGCTCTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR CCA 90 bp | TGCTCACAGCAGGTCACTGGTTCCAGAATGCTCACAGCAGGTCACTaGTTCCAGAATGCTCACAGCAGGTCACTGGTTCCAGAATGCTCA | + |
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Preference number: 1 (lower is better) Translates to: CSQQVTGSRMLTAGH*FQNAHSRSLVPECS Trigger: TGAGCATTCTGGAACCAGTGACCTGCTGTGAGCATTCTGGAACCAGTGACCTGCTGTGAGCATTCTGGAACCAGTGACCTGCTGTGAGCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR CCA 90 bp | GCGTGTTTCTTACTCTCTTGTCTTCTGTTACTTCGTCTTGTCCCGTaGGAGGCCAGGGTAAGTAGTTCAGCCAGAACTCGAGCTGAGGTG | + |
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Preference number: 1 (lower is better) Translates to: ACFLLSCLLLLRLVP*EARVSSSARTRAEV Trigger: CACCTCAGCTCGAGTTCTGGCTGAACTACTTACCCTGGCCTCCCACGGGACAAGACGAAGTAACAGAAGACAAGAGAGTAAGAAACACGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR TCA 90 bp | GGAATCCATTGGCAGCTGTGGGACAATGGCCATCTGAGGGACTTCTaGCTACCAACAAAATCACTGACAGAAGACAGGGGACACAACTGG | + |
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Preference number: 1 (lower is better) Translates to: GIHWQLWDNGHLRDF*LPTKSLTEDRGHNW Trigger: CCAGTTGTGTCCCCTGTCTTCTGTCAGTGATTTTGTTGGTAGTCAGAAGTCCCTCAGATGGCCATTGTCCCACAGCTGCCAATGGATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR TCA 90 bp | TGCCACAGAGACCCCATTGCTGTCCTGCCTGTCTGCATTCTGGTATaGGTCAGAGTCAAACAAAACACTTGGAATCCTCGGTCTCAGGGT | + |
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Preference number: 1 (lower is better) Translates to: CHRDPIAVLPVCILV*VRVKQNTWNPRSQG Trigger: ACCCTGAGACCGAGGATTCCAAGTGTTTTGTTTGACTCTGACTCATACCAGAATGCAGACAGGCAGGACAGCAATGGGGTCTCTGTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR TCA 90 bp | CTCTACCCCCAAAGCTCCCAAACTAGGGACATTTACCTGTGTCCCTaGAAGAATGAGACAGGCAAGTCATACCTCTCCAGCCTATGGCTG | + |
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Preference number: 1 (lower is better) Translates to: LYPQSSQTRDIYLCP*KNETGKSYLSSLWL Trigger: CAGCCATAGGCTGGAGAGGTATGACTTGCCTGTCTCATTCTTTCAGGGACACAGGTAAATGTCCCTAGTTTGGGAGCTTTGGGGGTAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108675.2 |
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| 3UTR CCA 90 bp | GCTATGTCTTCTGTGTGGCTCTTGCCTTACGTAGATCCTGCTATCTaGACACCCAGACACATGATCAGCCACTCATTTGCACAAGGGCAC | + |
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Preference number: 1 (lower is better) Translates to: AMSSVWLLPYVDPAI*TPRHMISHSFAQGH Trigger: GTGCCCTTGTGCAAATGAGTGGCTGATCATGTGTCTGGGTGTCCAGATAGCAGGATCTACGTAAGGCAAGAGCCACACAGAAGACATAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR CCA 90 bp | GCCAGCACTGTTGGGCATCTAAGCTTTGTGGGAAATTACACATGGTaGCTGACAGAGAGGCTGTTGGCTATGTCTTCTGTGTGGCTCTTG | + |
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Preference number: 1 (lower is better) Translates to: ASTVGHLSFVGNYTW*LTERLLAMSSVWLL Trigger: CAAGAGCCACACAGAAGACATAGCCAACAGCCTCTCTGTCAGCCACCATGTGTAATTTCCCACAAAGCTTAGATGCCCAACAGTGCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR GCA 90 bp | AGCGGTGGAAAATTTATTGAGAGCAGGTGTTATGTACCAAAAGGATaGTGGGCTTTCATTCGTAGTTGGCAGGTGTCACAGCGGGTGGTC | + |
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Preference number: 1 (lower is better) Translates to: SGGKFIESRCYVPKG*WAFIRSWQVSQRVV Trigger: GACCACCCGCTGTGACACCTGCCAACTACGAATGAAAGCCCAGCATCCTTTTGGTACATAACACCTGCTCTCAATAAATTTTCCACCGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR CCA 90 bp | GGTGGAAAATTTATTGAGAGCAGGTGTTATGTACCAAAAGGATGCTaGGCTTTCATTCGTAGTTGGCAGGTGTCACAGCGGGTGGTCCCT | + |
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Preference number: 1 (lower is better) Translates to: GGKFIESRCYVPKGC*AFIRSWQVSQRVVP Trigger: AGGGACCACCCGCTGTGACACCTGCCAACTACGAATGAAAGCCCAGCATCCTTTTGGTACATAACACCTGCTCTCAATAAATTTTCCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR CCA 90 bp | TCCCAGGAGACACTGTTTGTACAGATTTGGGGTTTCCCACAAGACTaGATGATGGAGCTCTACAGATTCTTGGTCTTACATTGGATGATC | + |
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Preference number: 1 (lower is better) Translates to: SQETLFVQIWGFPQD*MMELYRFLVLHWMI Trigger: GATCATCCAATGTAAGACCAAGAATCTGTAGAGCTCCATCATCCAGTCTTGTGGGAAACCCCAAATCTGTACAAACAGTGTCTCCTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR-3UTR TCA 90 bp | TGTGCATGCCCTCACTTGGCACACACATGGCTTCAGAGCCAGTGGAGAGGCTGGCCAGCACACAGAGGGTaGCTGGAATCCATTGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: CACPHLAHTWLQSQWRGWPAHRG*LESIGS Trigger: GCTGCCAATGGATTCCAGTCACCCTCTGTGTGCTGG...CCAGCCTCTCCACTGGCTCTGAAGCCATGTGTGTGCCAAGTGAGGGCATGCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR-3UTR CCA 90 bp | GGAACTTGTCCGGGGTCACACAATGCCCTGACTGGGCCTAGAGCCCATTCGGCCAACTTTGCCCCTGCCTaGCTTGCTCCTACAGTTCGT | + |
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Preference number: 2 (lower is better) Translates to: GTCPGSHNALTGPRAHSANFAPA*LAPTVR Trigger: ACGAACTGTAGGAGCAAGCCAGGCAGGGGCAAAGTT...GGCCGAATGGGCTCTAGGCCCAGTCAGGGCATTGTGTGACCCCGGACAAGTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR CAA 90 bp | GACAGCCCTCAGGATGCCCAGCACACAGAGGGTGACTGGAATCCATaGGCAGCTGTGGGACAATGGCCATCTGAGGGACTTCTGACTACC | + |
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Preference number: 2 (lower is better) Translates to: DSPQDAQHTEGDWNP*AAVGQWPSEGLLTT Trigger: GGTAGTCAGAAGTCCCTCAGATGGCCATTGTCCCACAGCTGCCAATGGATTCCAGTCACCCTCTGTGTGCTGGGCATCCTGAGGGCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR-3UTR TCA 90 bp | TGTGCATGCCCTCACTTGGCACACACATGGCTTCAGAGCCAGTGGAGAGGCTGGAACCAGGCTTTCCTCTaGCTGCTCCCTCCCTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: CACPHLAHTWLQSQWRGWNQAFL*LLPPSR Trigger: TCTTGAGGGAGGGAGCAGTCAGAGGAAAGCCTGGTT...CCAGCCTCTCCACTGGCTCTGAAGCCATGTGTGTGCCAAGTGAGGGCATGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR-3UTR TCA 90 bp | TCCCTGAAGACAGGGGTGCTCTGGCTGCCTGGCCACTCTGTGTTCTGTGAGTGGGGGCCAGTGTCTTCCTaGAAAGGGCTTTCAGTGCAA | + |
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Preference number: 2 (lower is better) Translates to: SLKTGVLWLPGHSVFCEWGPVSS*KGLSVQ Trigger: TTGCACTGAAAGCCCTTTTCAGGAAGACACTGGCCC...CCACTCACAGAACACAGAGTGGCCAGGCAGCCAGAGCACCCCTGTCTTCAGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR-3UTR GCA 90 bp | TCCCTGAAGACAGGGGTGCTCTGGCTGCCTGGCCACTCTGTGTTCTGTGAGTGGCCAAGTGGCTTGCTGTaGTTCAGTACCTCACCCAGT | + |
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Preference number: 2 (lower is better) Translates to: SLKTGVLWLPGHSVFCEWPSGLL*FSTSPS Trigger: ACTGGGTGAGGTACTGAAGCACAGCAAGCCACTTGG...CCACTCACAGAACACAGAGTGGCCAGGCAGCCAGAGCACCCCTGTCTTCAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR-3UTR TCA 90 bp | GGAACTTGTCCGGGGTCACACAATGCCCTGACTGGGCCTAGAGCCCATTCGGCCCTCTTCTTTCTGCTATaGGAAAGCGAGGCTAACTGC | + |
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Preference number: 2 (lower is better) Translates to: GTCPGSHNALTGPRAHSALFFLL*ESEANC Trigger: GCAGTTAGCCTCGCTTTCTCATAGCAGAAAGAAGAG...GGCCGAATGGGCTCTAGGCCCAGTCAGGGCATTGTGTGACCCCGGACAAGTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR-3UTR TCA 90 bp | GCCAGTGTCTTCCTGAAAAGGGCTTTCAGTGCAACTGAGCCAGGCCTTCGTGGCACTTCACTGCTGGCCTaGGAGCTCCCAGAAACCCTT | + |
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Preference number: 2 (lower is better) Translates to: ASVFLKRAFSATEPGLRGTSLLA*ELPETL Trigger: AAGGGTTTCTGGGAGCTCTCAGGCCAGCAGTGAAGT...GCCACGAAGGCCTGGCTCAGTTGCACTGAAAGCCCTTTTCAGGAAGACACTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR-3UTR CCA 90 bp | GGAACTTGTCCGGGGTCACACAATGCCCTGACTGGGCCTAGAGCCCATTCGGCCGTAGATCCTGCTATCTaGACACCCAGACACATGATC | + |
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Preference number: 2 (lower is better) Translates to: GTCPGSHNALTGPRAHSAVDPAI*TPRHMI Trigger: GATCATGTGTCTGGGTGTCCAGATAGCAGGATCTAC...GGCCGAATGGGCTCTAGGCCCAGTCAGGGCATTGTGTGACCCCGGACAAGTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR-3UTR TCA 90 bp | TGTGCATGCCCTCACTTGGCACACACATGGCTTCAGAGCCAGTGGAGAGGCTGGATTACACATGGTGGCTaGCAGAGAGGCTGTTGGCTA | + |
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Preference number: 2 (lower is better) Translates to: CACPHLAHTWLQSQWRGWITHGG*QRGCWL Trigger: TAGCCAACAGCCTCTCTGTCAGCCACCATGTGTAAT...CCAGCCTCTCCACTGGCTCTGAAGCCATGTGTGTGCCAAGTGAGGGCATGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR-3UTR TCA 90 bp | GGAACTTGTCCGGGGTCACACAATGCCCTGACTGGGCCTAGAGCCCATTCGGCCTGGTCTTACATTGGATaGTCCATTAGCAACCACCCT | + |
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Preference number: 2 (lower is better) Translates to: GTCPGSHNALTGPRAHSAWSYIG*SISNHP Trigger: AGGGTGGTTGCTAATGGATCATCCAATGTAAGACCA...GGCCGAATGGGCTCTAGGCCCAGTCAGGGCATTGTGTGACCCCGGACAAGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR-3UTR TCA 90 bp | GCCACTCTGTGTTCTGTGAGTGGTGTACTTCTAGAACGCTCACAGCAGGTCACTCTGTCCCCTGGGCTTTaGAGCAGCAGGCTCTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: ATLCSVSGVLLERSQQVTLSPGL*SSRLSG Trigger: ACCAGAGAGCCTGCTGCTTCAAAGCCCAGGGGACAG...AGTGACCTGCTGTGAGCGTTCTAGAAGTACACCACTCACAGAACACAGAGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR-3UTR CCA 90 bp | CTGGCCACTCTGTGTTCTGTGAGTGGTGTACTTCTAGAACGCTCACAGCAGGTCAAGCAGCAGGCTCTCTaGTACACCCCACTCAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: LATLCSVSGVLLERSQQVKQQAL*YTPLSW Trigger: CCAGCTGAGTGGGGTGTACCAGAGAGCCTGCTGCTT...GACCTGCTGTGAGCGTTCTAGAAGTACACCACTCACAGAACACAGAGTGGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR-3UTR TCA 90 bp | CTTCGTGGCTCTGGTTCAAAGTGTCCCACGAGTTGCCGGGGCTTCGTGCTGAGCTACCAACAAAATCACTaGCAGAAGACAGGGGACACA | + |
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Preference number: 2 (lower is better) Translates to: LRGSGSKCPTSCRGFVLSYQQNH*QKTGDT Trigger: TGTGTCCCCTGTCTTCTGTCAGTGATTTTGTTGGTA...GCTCAGCACGAAGCCCCGGCAACTCGTGGGACACTTTGAACCAGAGCCACGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| 3UTR-3UTR TCA 90 bp | GGAACTTGTCCGGGGTCACACAATGCCCTGACTGGGCCTAGAGCCCATTCGGCCGTCTGCATTCTGGTATaGGTCAGAGTCAAACAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: GTCPGSHNALTGPRAHSAVCILV*VRVKQN Trigger: GTTTTGTTTGACTCTGACTCATACCAGAATGCAGAC...GGCCGAATGGGCTCTAGGCCCAGTCAGGGCATTGTGTGACCCCGGACAAGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR-3UTR TCA 90 bp | CTGGCCACTCTGTGTTCTGTGAGTGGTGTACTTCTAGAACGCTCACAGCAGGTCACGGTCCTCACACCATaGACCTCTCAGGCAGCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LATLCSVSGVLLERSQQVTVLTP*TSQAAF Trigger: GAAAGCTGCCTGAGAGGTTCATGGTGTGAGGACCGT...GACCTGCTGTGAGCGTTCTAGAAGTACACCACTCACAGAACACAGAGTGGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR CAA 90 bp | ATAAGTGGTATGGCAACCCCCGTCGGCAGCGTGTTTCTTACTCTCTaGTCTTCTGTTACTTCGTCTTGTCCCGTGGGAGGCCAGGGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: ISGMATPVGSVFLTL*SSVTSSCPVGGQGK Trigger: CTTACCCTGGCCTCCCACGGGACAAGACGAAGTAACAGAAGACAAGAGAGTAAGAAACACGCTGCCGACGGGGGTTGCCATACCACTTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR-3UTR GCA 90 bp | CTGGCCACTCTGTGTTCTGTGAGTGGTGTACTTCTAGAACGCTCACAGCAGGTCACACAACTGGGCCAGTaGTCTAGGAAGGTCTCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LATLCSVSGVLLERSQQVTQLGQ*SRKVSR Trigger: TCTGGAGACCTTCCTAGAGCACTGGCCCAGTTGTGT...GACCTGCTGTGAGCGTTCTAGAAGTACACCACTCACAGAACACAGAGTGGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR-3UTR GCA 90 bp | CTGGCCACTCTGTGTTCTGTGAGTGGTGTACTTCTAGAACGCTCACAGCAGGTCCTGAGCCAAGTGGCTTaGTGTGCTTCAGTACCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: LATLCSVSGVLLERSQQVLSQVA*CASVPH Trigger: GTGAGGTACTGAAGCACAGCAAGCCACTTGGCTCAG...GACCTGCTGTGAGCGTTCTAGAAGTACACCACTCACAGAACACAGAGTGGCCAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR-3UTR CCA 90 bp | AGTGGAGAGGCTGGACGGAGGCAGCACTTCCTGCTTTATAACCAGGCTTTCCTCGTGGGAAATTACACATaGTGGCTGACAGAGAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: SGEAGRRQHFLLYNQAFLVGNYT*WLTERL Trigger: CAGCCTCTCTGTCAGCCACCATGTGTAATTTCCCAC...GAGGAAAGCCTGGTTATAAAGCAGGAAGTGCTGCCTCCGTCCAGCCTCTCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR-3UTR CCA 90 bp | GCCACTCTGTGTTCTGTGAGTGGTGTACTTCTAGAACGCTCACAGCAGGTCACTGCTTTCATTCGTAGTTaGCAGGTGTCACAGCGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: ATLCSVSGVLLERSQQVTAFIRS*QVSQRV Trigger: CACCCGCTGTGACACCTGCCAACTACGAATGAAAGC...AGTGACCTGCTGTGAGCGTTCTAGAAGTACACCACTCACAGAACACAGAGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR-3UTR CCA 90 bp | AGTGGAGAGGCTGGACGGAGGCAGCACTTCCTGCTTTATAACCAGGCTTTCCTCAATAGCCAGCACTGTTaGGCATCTAAGCTTTGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: SGEAGRRQHFLLYNQAFLNSQHC*ASKLCG Trigger: CCCACAAAGCTTAGATGCCCAACAGTGCTGGCTATT...GAGGAAAGCCTGGTTATAAAGCAGGAAGTGCTGCCTCCGTCCAGCCTCTCCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR-3UTR CCA 90 bp | GCAGCAAACTTTGCCCCTGCCTGGCTTGCTCCTACAGTTCGTGTACTTAGAAGAGTGCATGCCCTCACTTaGCACACACATGGCTTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: AANFAPAWLAPTVRVLRRVHALT*HTHGFR Trigger: TCTGAAGCCATGTGTGTGCCAAGTGAGGGCATGCAC...TCTTCTAAGTACACGAACTGTAGGAGCAAGCCAGGCAGGGGCAAAGTTTGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTCCTCCTGCGCTCCCCTGCCCATGGTATACAGAAGGGAAGGAACTTGTCCCTGTTTGTACAGATTTaGGGTTTCCCACAAGACTGG | + |
|
Preference number: 2 (lower is better) Translates to: AFLLRSPAHGIQKGRNLSLFVQI*GFPQDW Trigger: CCAGTCTTGTGGGAAACCCCAAATCTGTACAAACAG...GGACAAGTTCCTTCCCTTCTGTATACCATGGGCAGGGGAGCGCAGGAGGAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR-3UTR GCA 90 bp | GCTTTCCTCCTGCGCTCCCCTGCCCATGGTATACAGAAGGGAAGGAACTTGTCCAAATACTTATGTGCATaGCCTCACTTGGCACACACA | + |
|
Preference number: 2 (lower is better) Translates to: AFLLRSPAHGIQKGRNLSKYLCA*PHLAHT Trigger: TGTGTGTGCCAAGTGAGGGCATGCACATAAGTATTT...GGACAAGTTCCTTCCCTTCTGTATACCATGGGCAGGGGAGCGCAGGAGGAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR-3UTR TCA 90 bp | GCCACTCTGTGTTCTGTGAGTGGTGTACTTCTAGAACGCTCACAGCAGGTCACTTCCCACAAGACTGGATaGTGGAGCTCTACAGATTCT | + |
|
Preference number: 2 (lower is better) Translates to: ATLCSVSGVLLERSQQVTSHKTG*WSSTDS Trigger: AGAATCTGTAGAGCTCCATCATCCAGTCTTGTGGGA...AGTGACCTGCTGTGAGCGTTCTAGAAGTACACCACTCACAGAACACAGAGTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR-3UTR TCA 90 bp | GACCCAGCTTGCCTTAATCAAGTCCCAACACACTCTACCCCCAAAGCTCCCAAAGTGTCCCTGAAAGAATaGGACAGGCAAGTCATACCT | + |
|
Preference number: 2 (lower is better) Translates to: DPACLNQVPTHSTPKAPKVSLKE*DRQVIP Trigger: AGGTATGACTTGCCTGTCTCATTCTTTCAGGGACAC...TTTGGGAGCTTTGGGGGTAGAGTGTGTTGGGACTTGATTAAGGCAAGCTGGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108675.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCACTCTGTGTTCTGTGAGTGGTGTACTTCTAGAACGCTCACAGCAGGTCACTGTCAAACAAAACACTTaGAATCCTCGGTCTCAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: ATLCSVSGVLLERSQQVTVKQNT*NPRSQG Trigger: ACCCTGAGACCGAGGATTCCAAGTGTTTTGTTTGAC...AGTGACCTGCTGTGAGCGTTCTAGAAGTACACCACTCACAGAACACAGAGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR-3UTR TCA 90 bp | GGGATTGTCACCTTTTTGTACATGAGGCCACTGGCACAGAAAGGGAACCTGTCTCATCTGAGGGACTTCTaGCTACCAACAAAATCACTG | + |
|
Preference number: 2 (lower is better) Translates to: GIVTFLYMRPLAQKGNLSHLRDF*LPTKSL Trigger: CAGTGATTTTGTTGGTAGTCAGAAGTCCCTCAGATG...AGACAGGTTCCCTTTCTGTGCCAGTGGCCTCATGTACAAAAAGGTGACAATCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR-3UTR TCA 90 bp | GGGATTGTCACCTTTTTGTACATGAGGCCACTGGCACAGAAAGGGAACCTGTCTTCTGAGTCCTGTCTCTaGAATACTTATGTGCATGCC | + |
|
Preference number: 2 (lower is better) Translates to: GIVTFLYMRPLAQKGNLSSESCL*NTYVHA Trigger: GGCATGCACATAAGTATTTCAGAGACAGGACTCAGA...AGACAGGTTCCCTTTCTGTGCCAGTGGCCTCATGTACAAAAAGGTGACAATCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR-3UTR TCA 90 bp | AGGCCAGGACACACAGTTTCCTCTGCTACCAAGAGTCATATTTTTGGCCTGAACAGCTCCACAAAGCACTaGCAGAAAGCATTAGCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: RPGHTVSSATKSHIFGLNSSTKH*QKALAS Trigger: GGAAGCTAATGCTTTCTGTCAGTGCTTTGTGGAGCT...GTTCAGGCCAAAAATATGACTCTTGGTAGCAGAGGAAACTGTGTGTCCTGGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108675.2 |
||
| 3UTR-3UTR TCA 90 bp | GCCACTCTGTGTTCTGTGAGTGGTGTACTTCTAGAACGCTCACAGCAGGTCACTAGGTGTCATCAATCTTaGAGGACGCGTTTATTAACA | + |
|
Preference number: 2 (lower is better) Translates to: ATLCSVSGVLLERSQQVTRCHQS*RTRLLT Trigger: TGTTAATAAACGCGTCCTTCAAGATTGATGACACCT...AGTGACCTGCTGTGAGCGTTCTAGAAGTACACCACTCACAGAACACAGAGTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR-3UTR GCA 90 bp | GCTACGGCAAGACTTCTGGCATTAGCTTTAACTCTTCTTTCTGCTATGAGAAAGAGGCTTTCCTCTGACTaGTCCCTCCCTCAAGATCTA | + |
|
Preference number: 2 (lower is better) Translates to: ATARLLALALTLLSAMRKRLSSD*SLPQDL Trigger: TAGATCTTGAGGGAGGGAGCAGTCAGAGGAAAGCCT...CTTTCTCATAGCAGAAAGAAGAGTTAAAGCTAATGCCAGAAGTCTTGCCGTAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR-3UTR GCA 90 bp | GCAGCAAACTTTGCCCCTGCCTGGCTTGCTCCTACAGTTCGTGTACTTAGAAGATTTAACTCTTCTTTCTaGTATGAGAAAGCGAGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: AANFAPAWLAPTVRVLRRFNSSF*YEKARL Trigger: TAGCCTCGCTTTCTCATAGCAGAAAGAAGAGTTAAA...TCTTCTAAGTACACGAACTGTAGGAGCAAGCCAGGCAGGGGCAAAGTTTGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR-3UTR GCA 90 bp | ACATATATGATACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCATGCAGATAGGTaGTGGCACTTTCCCCCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: TYMIHTEREREREREREREHADR*WHFPPF Trigger: AAAAGGGGGAAAGTGCCAGCACCTATCTGCATGCTC...TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTATCATATATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021286.11 |
||
| 3UTR-3UTR GCA 90 bp | TTCCTACGTTTCCCCACATTTAAGGCCAGGACACACAGTTTCCTCTGCTACCAAAAAGCATTAGCTTCCTaGCTGTCAAGGTTATACCCA | + |
|
Preference number: 2 (lower is better) Translates to: FLRFPTFKARTHSFLCYQKALAS*LSRLYP Trigger: TGGGTATAACCTTGACAGGCAGGAAGCTAATGCTTT...TTGGTAGCAGAGGAAACTGTGTGTCCTGGCCTTAAATGTGGGGAAACGTAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108675.2 |
||
| 3UTR-3UTR GCA 90 bp | CAAAAAGGATGTTATTGGGCACGAAGCAGATTACAAGACATCCCAAGGAATGAGAGCATTTGGCTAGCATaGAGAGTCCTGATGCCATCC | + |
|
Preference number: 2 (lower is better) Translates to: QKGCYWARSRLQDIPRNESIWLA*RVLMPS Trigger: GGATGGCATCAGGACTCTGCATGCTAGCCAAATGCT...CTCATTCCTTGGGATGTCTTGTAATCTGCTTCGTGCCCAATAACATCCTTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108675.2 |
||
| 3UTR-3UTR TCA 90 bp | GTAAGCTGCCTGGTCCAGGCCTTTCTATTATGTAAAAGTTACAATTTGATATCTAGGCAGGCAGATTTCTaGGTTCAAGGCCAGCCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: VSCLVQAFLLCKSYNLISRQADF*VQGQPG Trigger: ACCTGGCTGGCCTTGAACTCAGAAATCTGCCTGCCT...AGATATCAAATTGTAACTTTTACATAATAGAAAGGCCTGGACCAGGCAGCTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021286.11 |
||
| 3UTR-3UTR CCA 90 bp | AGCAAAAAGGATGTTATTGGGCACGAAGCAGATTACAAGACATCCCAAGGAATGGTGAGGGCAGAGGTTTaGCTACAAAGTGAATCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: SKKDVIGHEADYKTSQGMVRAEV*LQSESE Trigger: CTCAGATTCACTTTGTAGCCAAACCTCTGCCCTCAC...CATTCCTTGGGATGTCTTGTAATCTGCTTCGTGCCCAATAACATCCTTTTTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108675.2 |
||
| 3UTR-3UTR TCA 90 bp | GTAAGCTGCCTGGTCCAGGCCTTTCTATTATGTAAAAGTTACAATTTGATATCTTCTAGGTCTACGCAGTaGGACCCTGGCTCAGAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: VSCLVQAFLLCKSYNLISSRSTQ*DPGSEK Trigger: CTTTTCTGAGCCAGGGTCTCACTGCGTAGACCTAGA...AGATATCAAATTGTAACTTTTACATAATAGAAAGGCCTGGACCAGGCAGCTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021286.11 |
||
| 3UTR-3UTR CCA 90 bp | AAAGACATTTATTTCACTGTTTGCAAAGCTCATAAAGGCAATCACATCATGTGGTACGCAGTGAGACCCTaGCTCAGAAAAGGAGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: KDIYFTVCKAHKGNHIMWYAVRP*LRKGGG Trigger: TCCTCCTCCTTTTCTGAGCCAGGGTCTCACTGCGTA...CCACATGATGTGATTGCCTTTATGAGCTTTGCAAACAGTGAAATAAATGTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021286.11 |
||
| 3UTR-3UTR CCA 90 bp | AAAGACATTTATTTCACTGTTTGCAAAGCTCATAAAGGCAATCACATCATGTGGGCAAAGCTAGTACTCTaGAAGGCAGAGGTAAGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: KDIYFTVCKAHKGNHIMWAKLVL*KAEVRG Trigger: TCCTCTTACCTCTGCCTTCCAGAGTACTAGCTTTGC...CCACATGATGTGATTGCCTTTATGAGCTTTGCAAACAGTGAAATAAATGTCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021286.11 |
||
| 3UTR CCA 72 bp | GGAGCTGTCCCCTGGGCTTTGAAGCAGCAGGCTCTCTaGTACACCCCACTCAGCTGGGCATGCCTGGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GAVPWALKQQAL*YTPLSWACLAA Trigger: AGCAGCCAGGCATGCCCAGCTGAGTGGGGTGTACCAGAGAGCCTGCTGCTTCAAAGCCCAGGGGACAGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR GCA 72 bp | GGAAGACTGCCTGGGGATGAGTCTCCCTGCCTGCAGTaGCCACGGTCCTCACACCATGAACCTCTCAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GRLPGDESPCLQ*PRSSHHEPLRQ Trigger: CTGCCTGAGAGGTTCATGGTGTGAGGACCGTGGGCACTGCAGGCAGGGAGACTCATCCCCAGGCAGTCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR GCA 72 bp | CAGCAGGCTCTCTGGTACACCCCACTCAGCTGGGCATaGCTGGCTGCTTTGGATGGTGCGGGGAAAGCCATC | + |
|
Preference number: 3 (lower is better) Translates to: QQALWYTPLSWA*LAALDGAGKAI Trigger: GATGGCTTTCCCCGCACCATCCAAAGCAGCCAGGCATGCCCAGCTGAGTGGGGTGTACCAGAGAGCCTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR-3UTR CAA 90 bp | TCCCTGAAGACAGGGGTGCTCTGGCTGCCTGGCCACTCTGTGTTCTGTGAGTGGGCTCCCAGAAACCCTTaGCTGTGCCACAGAGACCCC | + |
|
Preference number: 3 (lower is better) Translates to: SLKTGVLWLPGHSVFCEWAPRNP*LCHRDP Trigger: GGGGTCTCTGTGGCACAGCAAAGGGTTTCTGGGAGC...CCACTCACAGAACACAGAGTGGCCAGGCAGCCAGAGCACCCCTGTCTTCAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR TCA 72 bp | CCTGGCTGCTTTGGATGGTGCGGGGAAAGCCATCTTTaGGGAAGACTGCCTGGGGATGAGTCTCCCTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PGCFGWCGESHL*GRLPGDESPCL Trigger: CAGGCAGGGAGACTCATCCCCAGGCAGTCTTCCTCAAAGATGGCTTTCCCCGCACCATCCAAAGCAGCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR GCA 72 bp | ACTGCTGGCCTGAGAGCTCCCAGAAACCCTTTGCTGTaGCACAGAGACCCCATTGCTGTCCTGCCTGTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TAGLRAPRNPLL*HRDPIAVLPVC Trigger: GCAGACAGGCAGGACAGCAATGGGGTCTCTGTGGCACAGCAAAGGGTTTCTGGGAGCTCTCAGGCCAGCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR GCA 72 bp | GGCCTTCGTGGCTCTGGTTCAAAGTGTCCCACGAGTTaGCGGGGCTTCGTGCTGAGCAAGTCAAGAGGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: GLRGSGSKCPTS*RGFVLSKSRGG Trigger: ACCTCCTCTTGACTTGCTCAGCACGAAGCCCCGGCAACTCGTGGGACACTTTGAACCAGAGCCACGAAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR GCA 72 bp | TTGGATGGTGCGGGGAAAGCCATCTTTGAGGAAGACTaGCTGGGGATGAGTCTCCCTGCCTGCAGTGCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LDGAGKAIFEED*LGMSLPACSAH Trigger: GTGGGCACTGCAGGCAGGGAGACTCATCCCCAGGCAGTCTTCCTCAAAGATGGCTTTCCCCGCACCATCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR CCA 72 bp | TTGAAGCAGCAGGCTCTCTGGTACACCCCACTCAGCTaGGCATGCCTGGCTGCTTTGGATGGTGCGGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LKQQALWYTPLS*ACLAALDGAGK Trigger: TTTCCCCGCACCATCCAAAGCAGCCAGGCATGCCCAGCTGAGTGGGGTGTACCAGAGAGCCTGCTGCTTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR-3UTR CAA 90 bp | CTTCGTGGCTCTGGTTCAAAGTGTCCCACGAGTTGCCGGGGCTTCGTGCTGAGCTGTGCATGCCCTCACTaGGCACACACATGGCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LRGSGSKCPTSCRGFVLSCACPH*AHTWLQ Trigger: CTGAAGCCATGTGTGTGCCAAGTGAGGGCATGCACA...GCTCAGCACGAAGCCCCGGCAACTCGTGGGACACTTTGAACCAGAGCCACGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR-3UTR CAA 90 bp | TCCCTGAAGACAGGGGTGCTCTGGCTGCCTGGCCACTCTGTGTTCTGTGAGTGGCCTGAGCCAAGTGGCTaGCTGTGCTTCAGTACCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SLKTGVLWLPGHSVFCEWPEPSG*LCFSTS Trigger: TGAGGTACTGAAGCACAGCAAGCCACTTGGCTCAGG...CCACTCACAGAACACAGAGTGGCCAGGCAGCCAGAGCACCCCTGTCTTCAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR-3UTR CAA 90 bp | CTGGCCACTCTGTGTTCTGTGAGTGGTGTACTTCTAGAACGCTCACAGCAGGTCGCTGTCCCCTGGGCTTaGAAGCAGCAGGCTCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LATLCSVSGVLLERSQQVAVPWA*KQQALW Trigger: CCAGAGAGCCTGCTGCTTCAAAGCCCAGGGGACAGC...GACCTGCTGTGAGCGTTCTAGAAGTACACCACTCACAGAACACAGAGTGGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR TCA 72 bp | TCCAGCAAGGCTCCTGTCTTCCCAATCACACGCCCCTaGCACAAGCCCACACTCTTCTTCACCTCCAGTCCG | + |
|
Preference number: 3 (lower is better) Translates to: SSKAPVFPITRP*HKPTLFFTSSP Trigger: CGGACTGGAGGTGAAGAAGAGTGTGGGCTTGTGTCAGGGGCGTGTGATTGGGAAGACAGGAGCCTTGCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR GCA 72 bp | GAGCCAGTGGAGAGGCTGGACGGAGGCAGCACTTCCTaGTTTATAACCAGGCTTTCCTCTGACTGCTCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: EPVERLDGGSTS*FITRLSSDCSL Trigger: GAGGGAGCAGTCAGAGGAAAGCCTGGTTATAAAGCAGGAAGTGCTGCCTCCGTCCAGCCTCTCCACTGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR GCA 72 bp | CCGCCCCTCACAGCCTGCTTCACACCCTCTGCCAGTTaGCACCTCCTGGTATACTATGACCCTGACAATCTG | + |
|
Preference number: 3 (lower is better) Translates to: PPLTACFTPSAS*HLLVYYDPDNL Trigger: CAGATTGTCAGGGTCATAGTATACCAGGAGGTGGCAACTGGCAGAGGGTGTGAAGCAGGCTGTGAGGGGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR GCA 72 bp | TTTGAGGAAGACTGCCTGGGGATGAGTCTCCCTGCCTaGAGTGCCCACGGTCCTCACACCATGAACCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: FEEDCLGMSLPA*SAHGPHTMNLS Trigger: TGAGAGGTTCATGGTGTGAGGACCGTGGGCACTGCAGGCAGGGAGACTCATCCCCAGGCAGTCTTCCTCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR CCA 72 bp | GACAGCCCTCAGGATGCCCAGCACACAGAGGGTGACTaGAATCCATTGGCAGCTGTGGGACAATGGCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: DSPQDAQHTEGD*NPLAAVGQWPS Trigger: AGATGGCCATTGTCCCACAGCTGCCAATGGATTCCAGTCACCCTCTGTGTGCTGGGCATCCTGAGGGCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR CCA 72 bp | TGCCCTCACTTGGCACACACATGGCTTCAGAGCCAGTaGAGAGGCTGGACGGAGGCAGCACTTCCTGCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: CPHLAHTWLQSQ*RGWTEAALPAL Trigger: TAAAGCAGGAAGTGCTGCCTCCGTCCAGCCTCTCCACTGGCTCTGAAGCCATGTGTGTGCCAAGTGAGGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR CCA 72 bp | GGTACACCCCACTCAGCTGGGCATGCCTGGCTGCTTTaGATGGTGCGGGGAAAGCCATCTTTGAGGAAGACT | + |
|
Preference number: 3 (lower is better) Translates to: GTPHSAGHAWLL*MVRGKPSLRKT Trigger: AGTCTTCCTCAAAGATGGCTTTCCCCGCACCATCCAAAGCAGCCAGGCATGCCCAGCTGAGTGGGGTGTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR GCA 72 bp | ATAGGAAGAGTCCCCTTCCACCTGAGCCAAGTGGCTTaGTGTGCTTCAGTACCTCACCCAGTCCTCCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: IGRVPFHLSQVA*CASVPHPVLPA Trigger: TGCTGGGAGGACTGGGTGAGGTACTGAAGCACAGCAAGCCACTTGGCTCAGGTGGAAGGGGACTCTTCCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR GCA 72 bp | GAGAGACTGCTCAGTCGGGGGAGCATTTGGCTAGCATaGAGAGTCCTGATGCCATCCCCAGCACCACACAAA | + |
|
Preference number: 3 (lower is better) Translates to: ERLLSRGSIWLA*RVLMPSPAPHK Trigger: TTTGTGTGGTGCTGGGGATGGCATCAGGACTCTGCATGCTAGCCAAATGCTCCCCCGACTGAGCAGTCTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108675.2 |
||
| 3UTR CCA 72 bp | AGGATGCCCAGCACACAGAGGGTGACTGGAATCCATTaGCAGCTGTGGGACAATGGCCATCTGAGGGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: RMPSTQRVTGIH*QLWDNGHLRDF Trigger: GAAGTCCCTCAGATGGCCATTGTCCCACAGCTGCCAATGGATTCCAGTCACCCTCTGTGTGCTGGGCATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR CCA 72 bp | AGGGAACCACCGCTCAGAAGTGTCATGGAAGTCCTCTaGTTGGAGCAGCATCCAGCCATCCTCAAGGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: REPPLRSVMEVL*LEQHPAILKAV Trigger: CACTGCCTTGAGGATGGCTGGATGCTGCTCCAACCAGAGGACTTCCATGACACTTCTGAGCGGTGGTTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108675.2 |
||
| 3UTR CCA 72 bp | CCAAGGAATGAGAGACTGCTCAGTCGGGGGAGCATTTaGCTAGCATGCAGAGTCCTGATGCCATCCCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: PRNERLLSRGSI*LACRVLMPSPA Trigger: TGCTGGGGATGGCATCAGGACTCTGCATGCTAGCCAAATGCTCCCCCGACTGAGCAGTCTCTCATTCCTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108675.2 |
||
| 3UTR TCA 72 bp | GTCACAGGACCTACCACAGGCCTGTCTCCTCCTCACTaGAGCCAATGCTACGGCAAGACTTCTGGCATTAGC | + |
|
Preference number: 3 (lower is better) Translates to: VTGPTTGLSPPH*SQCYGKTSGIS Trigger: GCTAATGCCAGAAGTCTTGCCGTAGCATTGGCTTCAGTGAGGAGGAGACAGGCCTGTGGTAGGTCCTGTGAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR TCA 72 bp | GGCCAGTGTCTTCCTGAAAAGGGCTTTCAGTGCAACTaGGCCAGGCCTTCGTGGCTCTGGTTCAAAGTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GQCLPEKGFQCN*ARPSWLWFKVS Trigger: GGACACTTTGAACCAGAGCCACGAAGGCCTGGCTCAGTTGCACTGAAAGCCCTTTTCAGGAAGACACTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR GCA 72 bp | ATCACTGACAGAAGACAGGGGACACAACTGGGCCAGTaGTCTAGGAAGGTCTCCAGAGCTGCTCAGCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: ITDRRQGTQLGQ*SRKVSRAAQLC Trigger: ACAGAGCTGAGCAGCTCTGGAGACCTTCCTAGAGCACTGGCCCAGTTGTGTCCCCTGTCTTCTGTCAGTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR GCA 72 bp | TCCCCAGCACCACACAAAACTGGGTGCACCGGAGTATaGCTTTACCTGAGTTCTCAGGATGTGAGGGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SPAPHKTGCTGV*LYLSSQDVRAE Trigger: CTCTGCCCTCACATCCTGAGAACTCAGGTAAAGGCATACTCCGGTGCACCCAGTTTTGTGTGGTGCTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108675.2 |
||
| 3UTR GCA 72 bp | CTGGCTTTTAACGCTCTACCCCGCCTCACTCTTCAGTaGTGGGATCACAGATGTGTACAACCACCCGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LAFNALPRLTLQ*WDHRCVQPPGS Trigger: TGAGCCGGGTGGTTGTACACATCTGTGATCCCAGCACTGAAGAGTGAGGCGGGGTAGAGCGTTAAAAGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108675.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGCCTAGCCTGGCCTCAAACTTACTATGTAGCCCAGGCTGGCTTTTAACGCTCATGGAAGTCCTCTGGTaGGAGCAGCATCCAGCCATC | + |
|
Preference number: 3 (lower is better) Translates to: EPSLASNLLCSPGWLLTLMEVLW*EQHPAI Trigger: GATGGCTGGATGCTGCTCCAACCAGAGGACTTCCAT...GAGCGTTAAAAGCCAGCCTGGGCTACATAGTAAGTTTGAGGCCAGGCTAGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108675.2 |
||
| 3UTR-3UTR CAA 90 bp | GACCCAGCTTGCCTTAATCAAGTCCCAACACACTCTACCCCCAAAGCTCCCAAACAGTCGGGGGAGCATTaGGCTAGCATGCAGAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: DPACLNQVPTHSTPKAPKQSGEH*ASMQSP Trigger: AGGACTCTGCATGCTAGCCAAATGCTCCCCCGACTG...TTTGGGAGCTTTGGGGGTAGAGTGTGTTGGGACTTGATTAAGGCAAGCTGGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000108675.2 |
||
| 3UTR TCA 72 bp | AGGCAGCACTTCCTGCTTTATAACCAGGCTTTCCTCTaGCTGCTCCCTCCCTCAAGATCTAAGGCTGTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: RQHFLLYNQAFL*LLPPSRSKAVG Trigger: GCCCACAGCCTTAGATCTTGAGGGAGGGAGCAGTCAGAGGAAAGCCTGGTTATAAAGCAGGAAGTGCTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR GCA 72 bp | AGCAGTGTCCAGTGTCTAGAAAGCAAACAGAGTACATaGCACTCTCTGACAGGACGCGGAGGCTCTAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SSVQCLESKQST*HSLTGRGGSSL Trigger: CAGGCTAGAGCCTCCGCGTCCTGTCAGAGAGTGGCATGTACTCTGTTTGCTTTCTAGACACTGGACACTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021286.11 |
||
| 3UTR GCA 72 bp | GTCCTGATGCCATCCCCAGCACCACACAAAACTGGGTaGACCGGAGTATGCCTTTACCTGAGTTCTCAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: VLMPSPAPHKTG*TGVCLYLSSQD Trigger: ATCCTGAGAACTCAGGTAAAGGCATACTCCGGTGCACCCAGTTTTGTGTGGTGCTGGGGATGGCATCAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108675.2 |
||
| 3UTR CCA 72 bp | CCAACAAAATCACTGACAGAAGACAGGGGACACAACTaGGCCAGTGCTCTAGGAAGGTCTCCAGAGCTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: PTKSLTEDRGHN*ASALGRSPELL Trigger: GAGCAGCTCTGGAGACCTTCCTAGAGCACTGGCCCAGTTGTGTCCCCTGTCTTCTGTCAGTGATTTTGTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR CCA 72 bp | AAATACTTATGTGCATGCCCTCACTTGGCACACACATaGCTTCAGAGCCAGTGGAGAGGCTGGACGGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: KYLCACPHLAHT*LQSQWRGWTEA Trigger: TGCCTCCGTCCAGCCTCTCCACTGGCTCTGAAGCCATGTGTGTGCCAAGTGAGGGCATGCACATAAGTATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR CCA 72 bp | CAGCCTGCTTCACACCCTCTGCCAGTTGCCACCTCCTaGTATACTATGACCCTGACAATCTGGCTAAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: QPASHPLPVATS*YTMTLTIWLSQ Trigger: CTGACTTAGCCAGATTGTCAGGGTCATAGTATACCAGGAGGTGGCAACTGGCAGAGGGTGTGAAGCAGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR CCA 72 bp | CTTTCATTGACAAAGTCCCTGAAGACAGGGGTGCTCTaGCTGCCTGGCCACTCTGTGTTCTGTGAGTGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LSLTKSLKTGVL*LPGHSVFCEWC Trigger: ACACCACTCACAGAACACAGAGTGGCCAGGCAGCCAGAGCACCCCTGTCTTCAGGGACTTTGTCAATGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR CCA 72 bp | CAGAGTCCTGATGCCATCCCCAGCACCACACAAAACTaGGTGCACCGGAGTATGCCTTTACCTGAGTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: QSPDAIPSTTQN*VHRSMPLPEFS Trigger: TGAGAACTCAGGTAAAGGCATACTCCGGTGCACCCAGTTTTGTGTGGTGCTGGGGATGGCATCAGGACTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108675.2 |
||
| 3UTR GCA 72 bp | ACCCTTTGCTGTGCCACAGAGACCCCATTGCTGTCCTaGCTGTCTGCATTCTGGTATGAGTCAGAGTCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: TLCCATETPLLS*LSAFWYESESN Trigger: GTTTGACTCTGACTCATACCAGAATGCAGACAGGCAGGACAGCAATGGGGTCTCTGTGGCACAGCAAAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR GCA 72 bp | GTAAGTAGTTCAGCCAGAACTCGAGCTGAGGTGATGTaGTCTCGAGATGGACACTTCACTGCTGGCCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: VSSSARTRAEVM*SRDGHFTAGLR Trigger: TCTCAGGCCAGCAGTGAAGTGTCCATCTCGAGAGCACATCACCTCAGCTCGAGTTCTGGCTGAACTACTTAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR GCA 72 bp | TTCCAGAAAGCTCACAGCAGGTCACTGGTTCCAGAATaGTCACAGCAGGTCACTGGTTCCAGAACGCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: FQKAHSRSLVPE*SQQVTGSRTLT Trigger: TGTGAGCGTTCTGGAACCAGTGACCTGCTGTGAGCATTCTGGAACCAGTGACCTGCTGTGAGCTTTCTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR-3UTR CAA 90 bp | TCCTGCTTTATAACCAGGCTTTCCTCTGACTGCTCCCTCCCTCAAGATCTAAGGGGTGACTGGAATCCATaGGCAGCTGTGGGACAATGG | + |
|
Preference number: 3 (lower is better) Translates to: SCFITRLSSDCSLPQDLRGDWNP*AAVGQW Trigger: CCATTGTCCCACAGCTGCCAATGGATTCCAGTCACC...CCTTAGATCTTGAGGGAGGGAGCAGTCAGAGGAAAGCCTGGTTATAAAGCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR-3UTR CAA 90 bp | GCCACTCTGTGTTCTGTGAGTGGTGTACTTCTAGAACGCTCACAGCAGGTCACTGGGATCCTCAGGAACTaGGGCATCATTGGCCAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: ATLCSVSGVLLERSQQVTGILRN*GIIGQV Trigger: AACTTGGCCAATGATGCCCAAGTTCCTGAGGATCCC...AGTGACCTGCTGTGAGCGTTCTAGAAGTACACCACTCACAGAACACAGAGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR-3UTR CAA 90 bp | GCCACTCTGTGTTCTGTGAGTGGTGTACTTCTAGAACGCTCACAGCAGGTCACTCCCAGGAGACACTGTTaGTACAGATTTGGGGTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: ATLCSVSGVLLERSQQVTPRRHC*YRFGVS Trigger: GGAAACCCCAAATCTGTACAAACAGTGTCTCCTGGG...AGTGACCTGCTGTGAGCGTTCTAGAAGTACACCACTCACAGAACACAGAGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR TCA 72 bp | TGGCAGCTGTGGGACAATGGCCATCTGAGGGACTTCTaGCTACCAACAAAATCACTGACAGAAGACAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: WQLWDNGHLRDF*LPTKSLTEDRG Trigger: TCCCCTGTCTTCTGTCAGTGATTTTGTTGGTAGTCAGAAGTCCCTCAGATGGCCATTGTCCCACAGCTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR TCA 72 bp | CCAGAACGCTCACAGCAGGTCACTGGTCTACAGACCTaGCATAGTAACTGGGAAACTAGGCCTTGCAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: PERSQQVTGLQT*HSNWETRPCKH Trigger: GTGTTTGCAAGGCCTAGTTTCCCAGTTACTATGTCAGGTCTGTAGACCAGTGACCTGCTGTGAGCGTTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR GCA 72 bp | TATCTGGACACCCAGACACATGATCAGCCACTCATTTaGACAAGGGCACGTGGTTTTCCGCAGTACAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: YLDTQTHDQPLI*TRARGFPQYKQ Trigger: CTGCTTGTACTGCGGAAAACCACGTGCCCTTGTGCAAATGAGTGGCTGATCATGTGTCTGGGTGTCCAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR GCA 72 bp | AGCACTTCCTGCTTTATAACCAGGCTTTCCTCTGACTaGTCCCTCCCTCAAGATCTAAGGCTGTGGGCTACT | + |
|
Preference number: 3 (lower is better) Translates to: STSCFITRLSSD*SLPQDLRLWAT Trigger: AGTAGCCCACAGCCTTAGATCTTGAGGGAGGGAGCAGTCAGAGGAAAGCCTGGTTATAAAGCAGGAAGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR GCA 72 bp | AACTTGGGCATCATTGGCCAAGTTAGCAGCAAACTTTaGCCCTGCCTGGCTTGCTCCTACAGTTCGTGTACT | + |
|
Preference number: 3 (lower is better) Translates to: NLGIIGQVSSKL*PCLACSYSSCT Trigger: AGTACACGAACTGTAGGAGCAAGCCAGGCAGGGGCAAAGTTTGCTGCTAACTTGGCCAATGATGCCCAAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR GCA 72 bp | ATCACCCAAGACCCTGTGAAAACACTGCCACTAATCTaGAAGCTGGGAGCTGCGATTCTGAACGCTCAACCT | + |
|
Preference number: 3 (lower is better) Translates to: ITQDPVKTLPLI*KLGAAILNAQP Trigger: AGGTTGAGCGTTCAGAATCGCAGCTCCCAGCTTGCAGATTAGTGGCAGTGTTTTCACAGGGTCTTGGGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021286.11 |
||
| 3UTR GCA 72 bp | CACCCGGCTCACAAAAGAGGATCAGATGACCCAGCTTaGCTTAATCAAGTCCCAACACACTCTACCCCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: HPAHKRGSDDPA*LNQVPTHSTPK Trigger: TTTGGGGGTAGAGTGTGTTGGGACTTGATTAAGGCAAGCTGGGTCATCTGATCCTCTTTTGTGAGCCGGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108675.2 |
||
| 3UTR CCA 72 bp | TGGCTGACAGAGAGGCTGTTGGCTATGTCTTCTGTGTaGCTCTTGCCTTACGTAGATCCTGCTATCTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: WLTERLLAMSSV*LLPYVDPAIWT Trigger: TGTCCAGATAGCAGGATCTACGTAAGGCAAGAGCCACACAGAAGACATAGCCAACAGCCTCTCTGTCAGCCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR-3UTR CAA 90 bp | GCCACTCTGTGTTCTGTGAGTGGTGTACTTCTAGAACGCTCACAGCAGGTCACTTGTCCAGCGCAGGCTTaGGATTATGTTCTCTTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: ATLCSVSGVLLERSQQVTCPAQA*DYVLLR Trigger: CCTTAAGAGAACATAATCCAAAGCCTGCGCTGGACA...AGTGACCTGCTGTGAGCGTTCTAGAAGTACACCACTCACAGAACACAGAGTGGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR TCA 72 bp | GACCCCATTGCTGTCCTGCCTGTCTGCATTCTGGTATaGGTCAGAGTCAAACAAAACACTTGGAATCCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: DPIAVLPVCILV*VRVKQNTWNPR Trigger: CCGAGGATTCCAAGTGTTTTGTTTGACTCTGACTCATACCAGAATGCAGACAGGCAGGACAGCAATGGGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR GCA 72 bp | TATGTCTTCTGTGTGGCTCTTGCCTTACGTAGATCCTaGTATCTGGACACCCAGACACATGATCAGCCACTC | + |
|
Preference number: 3 (lower is better) Translates to: YVFCVALALRRS*YLDTQTHDQPL Trigger: GAGTGGCTGATCATGTGTCTGGGTGTCCAGATAGCAGGATCTACGTAAGGCAAGAGCCACACAGAAGACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR CCA 72 bp | TCTGTGTGGCTCTTGCCTTACGTAGATCCTGCTATCTaGACACCCAGACACATGATCAGCCACTCATTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SVWLLPYVDPAI*TPRHMISHSFA Trigger: TGCAAATGAGTGGCTGATCATGTGTCTGGGTGTCCAGATAGCAGGATCTACGTAAGGCAAGAGCCACACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR CCA 72 bp | TCATTGGCCAAGTTAGCAGCAAACTTTGCCCCTGCCTaGCTTGCTCCTACAGTTCGTGTACTTAGAAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SLAKLAANFAPA*LAPTVRVLRRV Trigger: CACTCTTCTAAGTACACGAACTGTAGGAGCAAGCCAGGCAGGGGCAAAGTTTGCTGCTAACTTGGCCAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR CCA 72 bp | CTTTACCTGAGTTCTCAGGATGTGAGGGCAGAGGTTTaGCTACAAAGTGAATCTGAGTCCTGCTTGGGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: LYLSSQDVRAEV*LQSESESCLGY Trigger: GTAGCCCAAGCAGGACTCAGATTCACTTTGTAGCCAAACCTCTGCCCTCACATCCTGAGAACTCAGGTAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108675.2 |
||
| 3UTR TCA 72 bp | AGGTACACCAAGAGCCCAGAGCGGTGGAAAATTTATTaGGAGCAGGTGTTATGTACCAAAAGGATGCTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: RYTKSPERWKIY*EQVLCTKRMLG Trigger: GCCCAGCATCCTTTTGGTACATAACACCTGCTCTCAATAAATTTTCCACCGCTCTGGGCTCTTGGTGTACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR TCA 72 bp | CAAAGCTCCCAAACTAGGGACATTTACCTGTGTCCCTaGAAGAATGAGACAGGCAAGTCATACCTCTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: QSSQTRDIYLCP*KNETGKSYLSS Trigger: GCTGGAGAGGTATGACTTGCCTGTCTCATTCTTTCAGGGACACAGGTAAATGTCCCTAGTTTGGGAGCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108675.2 |
||
| 3UTR GCA 72 bp | AGTTTCGCTCTGAGTCCTGTCTCTGAAATACTTATGTaGATGCCCTCACTTGGCACACACATGGCTTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SFALSPVSEILM*MPSLGTHMASE Trigger: CTCTGAAGCCATGTGTGTGCCAAGTGAGGGCATGCACATAAGTATTTCAGAGACAGGACTCAGAGCGAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR CCA 72 bp | GTTGGGCATCTAAGCTTTGTGGGAAATTACACATGGTaGCTGACAGAGAGGCTGTTGGCTATGTCTTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VGHLSFVGNYTW*LTERLLAMSSV Trigger: CACAGAAGACATAGCCAACAGCCTCTCTGTCAGCCACCATGTGTAATTTCCCACAAAGCTTAGATGCCCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR CCA 72 bp | AGAGGTAAGAGGACCTCTGTGAGTTCAAGTCCAACCTaGTCTACACAGAGTTCCAGATGTTCTAGGTCTACG | + |
|
Preference number: 3 (lower is better) Translates to: RGKRTSVSSSPT*STQSSRCSRST Trigger: CGTAGACCTAGAACATCTGGAACTCTGTGTAGACCAGGTTGGACTTGAACTCACAGAGGTCCTCTTACCTCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021286.11 |
||
| 3UTR CCA 72 bp | TTTATTGAGAGCAGGTGTTATGTACCAAAAGGATGCTaGGCTTTCATTCGTAGTTGGCAGGTGTCACAGCGG | + |
|
Preference number: 3 (lower is better) Translates to: FIESRCYVPKGC*AFIRSWQVSQR Trigger: CCGCTGTGACACCTGCCAACTACGAATGAAAGCCCAGCATCCTTTTGGTACATAACACCTGCTCTCAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR CCA 72 bp | ACTGTTGGGCATCTAAGCTTTGTGGGAAATTACACATaGTGGCTGACAGAGAGGCTGTTGGCTATGTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: TVGHLSFVGNYT*WLTERLLAMSS Trigger: AGAAGACATAGCCAACAGCCTCTCTGTCAGCCACCATGTGTAATTTCCCACAAAGCTTAGATGCCCAACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR TCA 72 bp | ATCTTTTGCAGTCAGTTTCGCTCTGAGTCCTGTCTCTaGAATACTTATGTGCATGCCCTCACTTGGCACACA | + |
|
Preference number: 3 (lower is better) Translates to: IFCSQFRSESCL*NTYVHALTWHT Trigger: TGTGTGCCAAGTGAGGGCATGCACATAAGTATTTCAGAGACAGGACTCAGAGCGAAACTGACTGCAAAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR TCA 72 bp | CTTACATTGGATGATCCATTAGCAACCACCCTGCCCTaGCAAATGTGTCTCAGGGTACACTGTGTCTTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LTLDDPLATTLP*QMCLRVHCVLK Trigger: CTTTAAGACACAGTGTACCCTGAGACACATTTGTCAGGGCAGGGTGGTTGCTAATGGATCATCCAATGTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR TCA 72 bp | CTTGAAACCACCATTAACTTCAAGTCCAACTGCCTCTaGTTCCCCTGGTTTCCAAAGACACCTGTACACATG | + |
|
Preference number: 3 (lower is better) Translates to: LETTINFKSNCL*FPWFPKTPVHM Trigger: CATGTGTACAGGTGTCTTTGGAAACCAGGGGAATCAGAGGCAGTTGGACTTGAAGTTAATGGTGGTTTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021286.11 |
||
| 3UTR TCA 72 bp | GCAGAGGACCCATTGGTTCCTATCATCCACATTCAGTaGCTTGAAACCACCATTAACTTCAAGTCCAACTGC | + |
|
Preference number: 3 (lower is better) Translates to: AEDPLVPIIHIQ*LETTINFKSNC Trigger: GCAGTTGGACTTGAAGTTAATGGTGGTTTCAAGTCACTGAATGTGGATGATAGGAACCAATGGGTCCTCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021286.11 |
||
| 3UTR TCA 72 bp | TGTTTGTACAGATTTGGGGTTTCCCACAAGACTGGATaGTGGAGCTCTACAGATTCTTGGTCTTACATTGGA | + |
|
Preference number: 3 (lower is better) Translates to: CLYRFGVSHKTG*WSSTDSWSYIG Trigger: TCCAATGTAAGACCAAGAATCTGTAGAGCTCCATCATCCAGTCTTGTGGGAAACCCCAAATCTGTACAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR CCA 72 bp | ACACTGTTTGTACAGATTTGGGGTTTCCCACAAGACTaGATGATGGAGCTCTACAGATTCTTGGTCTTACAT | + |
|
Preference number: 3 (lower is better) Translates to: TLFVQIWGFPQD*MMELYRFLVLH Trigger: ATGTAAGACCAAGAATCTGTAGAGCTCCATCATCCAGTCTTGTGGGAAACCCCAAATCTGTACAAACAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR CAA 72 bp | AGGCCTTCGTGGCTCTGGTTCAAAGTGTCCCACGAGTaGCCGGGGCTTCGTGCTGAGCAAGTCAAGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RPSWLWFKVSHE*PGLRAEQVKRR Trigger: CCTCCTCTTGACTTGCTCAGCACGAAGCCCCGGCAACTCGTGGGACACTTTGAACCAGAGCCACGAAGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR CAA 72 bp | TGGTACACCCCACTCAGCTGGGCATGCCTGGCTGCTTaGGATGGTGCGGGGAAAGCCATCTTTGAGGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: WYTPLSWACLAA*DGAGKAIFEED Trigger: GTCTTCCTCAAAGATGGCTTTCCCCGCACCATCCAAAGCAGCCAGGCATGCCCAGCTGAGTGGGGTGTACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| CDS-3UTR TCA 90 bp | GGAACTTGTCCGGGGTCACACAATGCCCTGACTGGGCCTAGAGCCCATTCGGCCCCCGCGTCCTGTTCTTaGATAATTTTCTGCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GTCPGSHNALTGPRAHSAPASCS*IIFCCC Trigger: ACAGCAGCAGAAAATTATTCAAGAACAGGACGCGGG...GGCCGAATGGGCTCTAGGCCCAGTCAGGGCATTGTGTGACCCCGGACAAGTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR CAA 72 bp | CAGGATGCCCAGCACACAGAGGGTGACTGGAATCCATaGGCAGCTGTGGGACAATGGCCATCTGAGGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: QDAQHTEGDWNP*AAVGQWPSEGL Trigger: AAGTCCCTCAGATGGCCATTGTCCCACAGCTGCCAATGGATTCCAGTCACCCTCTGTGTGCTGGGCATCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| CDS-3UTR TCA 90 bp | ACATGGCTTCAGAGCCAGTGGAGAGGCTGGACGGAGGCAGCACTTCCTGCTTTACATCCCACAGGAAGTTaGCTTTCTGTCCACCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TWLQSQWRGWTEAALPALHPTGS*LSVHQG Trigger: ACCCTGGTGGACAGAAAGTCAACTTCCTGTGGGATG...TAAAGCAGGAAGTGCTGCCTCCGTCCAGCCTCTCCACTGGCTCTGAAGCCATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR CAA 72 bp | ATGGCAACCCCCGTCGGCAGCGTGTTTCTTACTCTCTaGTCTTCTGTTACTTCGTCTTGTCCCGTGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: MATPVGSVFLTL*SSVTSSCPVGG Trigger: GCCTCCCACGGGACAAGACGAAGTAACAGAAGACAAGAGAGTAAGAAACACGCTGCCGACGGGGGTTGCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR CAA 72 bp | GACCCTGACAATCTGGCTAAGTCAGCTCCTAGGGCCTaGGGATCCTCAGGAACTTGGGCATCATTGGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: DPDNLAKSAPRA*GSSGTWASLAK Trigger: CTTGGCCAATGATGCCCAAGTTCCTGAGGATCCCAAGGCCCTAGGAGCTGACTTAGCCAGATTGTCAGGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| CDS-3UTR TCA 90 bp | GCAGCAAACTTTGCCCCTGCCTGGCTTGCTCCTACAGTTCGTGTACTTAGAAGAGCAGTCTCTCTCGGGTaGCAAGGTCATCCAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AANFAPAWLAPTVRVLRRAVSLG*QGHPAG Trigger: ACCTGCTGGATGACCTTGTCACCCGAGAGAGACTGC...TCTTCTAAGTACACGAACTGTAGGAGCAAGCCAGGCAGGGGCAAAGTTTGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| CDS-3UTR CCA 90 bp | CAGGGAACCACCGCTCAGAAGTGTCATGGAAGTCCTCTGGTTGGAGCAGCATCCGTGGAAAAATCTGGATaGCCCAGATTCCTTCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QGTTAQKCHGSPLVGAASVEKSG*PRFLPV Trigger: GACAGGAAGGAATCTGGGCCATCCAGATTTTTCCAC...GGATGCTGCTCCAACCAGAGGACTTCCATGACACTTCTGAGCGGTGGTTCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108675.2 |
||
| 3UTR CAA 72 bp | GTCCTGTCTCTGAAATACTTATGTGCATGCCCTCACTaGGCACACACATGGCTTCAGAGCCAGTGGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLSLKYLCACPH*AHTWLQSQWRG Trigger: GCCTCTCCACTGGCTCTGAAGCCATGTGTGTGCCAAGTGAGGGCATGCACATAAGTATTTCAGAGACAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| CDS-3UTR CCA 90 bp | GGGATTGTCACCTTTTTGTACATGAGGCCACTGGCACAGAAAGGGAACCTGTCTCAAAACCCAAACCTCTaGTCTCCTCCGGCTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GIVTFLYMRPLAQKGNLSQNPNL*SPPAPH Trigger: GTGAGGAGCCGGAGGAGACCAGAGGTTTGGGTTTTG...AGACAGGTTCCCTTTCTGTGCCAGTGGCCTCATGTACAAAAAGGTGACAATCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| CDS-3UTR CCA 90 bp | GAACCACCGCTCAGAAGTGTCATGGAAGTCCTCTGGTTGGAGCAGCATCCAGCCTTACATGGATACATCTaGCGTGTCGACACAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EPPLRSVMEVLWLEQHPALHGYI*RVDTAL Trigger: AAGAGCTGTGTCGACACGCCAGATGTATCCATGTAA...GGCTGGATGCTGCTCCAACCAGAGGACTTCCATGACACTTCTGAGCGGTGGTTC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108675.2 |
||
| CDS-3UTR TCA 90 bp | TGGGTGACTCTGATGCAAAGTGCCACAGTTATGAGTGAATTAGGCAAAGCTAGTCCGAGGTGCTGCCACTaGTGCTCAGCTGGAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: WVTLMQSATVMSELGKASPRCCH*CSAGTG Trigger: ACCAGTTCCAGCTGAGCATCAGTGGCAGCACCTCGG...ACTAGCTTTGCCTAATTCACTCATAACTGTGGCACTTTGCATCAGAGTCACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021286.11 |
||
| 3UTR CAA 72 bp | ACAGAGAGGCTGTTGGCTATGTCTTCTGTGTGGCTCTaGCCTTACGTAGATCCTGCTATCTGGACACCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TERLLAMSSVWL*PYVDPAIWTPR Trigger: TCTGGGTGTCCAGATAGCAGGATCTACGTAAGGCAAGAGCCACACAGAAGACATAGCCAACAGCCTCTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| CDS-3UTR TCA 90 bp | AGTGGAGAGGCTGGACGGAGGCAGCACTTCCTGCTTTATAACCAGGCTTTCCTCATTTCTTGGGCTATCTaGCACGTAGAATCGTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGEAGRRQHFLLYNQAFLISWAI*HVESYV Trigger: CACATACGATTCTACGTGTCAGATAGCCCAAGAAAT...GAGGAAAGCCTGGTTATAAAGCAGGAAGTGCTGCCTCCGTCCAGCCTCTCCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| CDS-3UTR GCA 90 bp | GCAGCAAACTTTGCCCCTGCCTGGCTTGCTCCTACAGTTCGTGTACTTAGAAGACTCATTCTTAAACGATaGCAGGAGCAGTCTCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: AANFAPAWLAPTVRVLRRLILKR*QEQSLS Trigger: CGAGAGAGACTGCTCCTGGCATCGTTTAAGAATGAG...TCTTCTAAGTACACGAACTGTAGGAGCAAGCCAGGCAGGGGCAAAGTTTGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| CDS-3UTR CCA 90 bp | AGCACTGTTGGGCATCTAAGCTTTGTGGGAAATTACACATGGTGGCTGACAGAGCACAGAGCCAAGGGTTaGGAGTTCCTCGCTTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: STVGHLSFVGNYTWWLTEHRAKG*EFLALL Trigger: AAGCAAAGCGAGGAACTCCCAACCCTTGGCTCTGTG...CTCTGTCAGCCACCATGTGTAATTTCCCACAAAGCTTAGATGCCCAACAGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR CAA 72 bp | CTGCATTCTGGTATGAGTCAGAGTCAAACAAAACACTaGGAATCCTCGGTCTCAGGGTCCCAGGAAAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LHSGMSQSQTKH*ESSVSGSQERA Trigger: TGCCCTTTCCTGGGACCCTGAGACCGAGGATTCCAAGTGTTTTGTTTGACTCTGACTCATACCAGAATGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| CDS-3UTR TCA 90 bp | ATTAGCTTTAACTCTTCTTTCTGCTATGAGAAAGCGAGGCTAACTGCCCATCCTTCATCAGGCTGGACCTaGTCAGATCCGGCTCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ISFNSSFCYEKARLTAHPSSGWT*SDPALH Trigger: GTGCAGAGCCGGATCTGATCAGGTCCAGCCTGATGA...AGGATGGGCAGTTAGCCTCGCTTTCTCATAGCAGAAAGAAGAGTTAAAGCTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| CDS-3UTR TCA 90 bp | GCCACTCTGTGTTCTGTGAGTGGTGTACTTCTAGAACGCTCACAGCAGGTCACTTGGCAAGGTCATCGATaGTCTCATTCTGTTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: ATLCSVSGVLLERSQQVTWQGHR*SHSVHP Trigger: TGGATGAACAGAATGAGATCATCGATGACCTTGCCA...AGTGACCTGCTGTGAGCGTTCTAGAAGTACACCACTCACAGAACACAGAGTGGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| CDS-3UTR CCA 90 bp | CTTAATCAAGTCCCAACACACTCTACCCCCAAAGCTCCCAAACTAGGGACATTTGTCCTCCTTGAGCTGTaGAAAAATCTGGATGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LNQVPTHSTPKAPKLGTFVLLEL*KNLDGP Trigger: TGGGCCATCCAGATTTTTCCACAGCTCAAGGAGGAC...AAATGTCCCTAGTTTGGGAGCTTTGGGGGTAGAGTGTGTTGGGACTTGATTAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000108675.2 |
||
| CDS-3UTR TCA 90 bp | GGGCAGAGGTTTGGCTACAAAGTGAATCTGAGTCCTGCTTGGGCTACTGAGAAAATTTCTTGGGCTATCTaGCACGTAGAATCGTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: GQRFGYKVNLSPAWATEKISWAI*HVESYV Trigger: CACATACGATTCTACGTGTCAGATAGCCCAAGAAAT...TTTCTCAGTAGCCCAAGCAGGACTCAGATTCACTTTGTAGCCAAACCTCTGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108675.2 |
||
| CDS-3UTR TCA 90 bp | TCCTGCTTTATAACCAGGCTTTCCTCTGACTGCTCCCTCCCTCAAGATCTAAGGGCAATAAAATCACCATaGTCATCCCACAGGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SCFITRLSSDCSLPQDLRAIKSP*SSHRKL Trigger: CAACTTCCTGTGGGATGATCATGGTGATTTTATTGC...CCTTAGATCTTGAGGGAGGGAGCAGTCAGAGGAAAGCCTGGTTATAAAGCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| 3UTR CAA 72 bp | AAGGTACACCAAGAGCCCAGAGCGGTGGAAAATTTATaGAGAGCAGGTGTTATGTACCAAAAGGATGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KVHQEPRAVENL*RAGVMYQKDAG Trigger: CCCAGCATCCTTTTGGTACATAACACCTGCTCTCAATAAATTTTCCACCGCTCTGGGCTCTTGGTGTACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| CDS-3UTR TCA 90 bp | GTAAGCTGCCTGGTCCAGGCCTTTCTATTATGTAAAAGTTACAATTTGATATCTGCAGTCTCTCTCGGGTaGCAAGGTCATCCAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VSCLVQAFLLCKSYNLISAVSLG*QGHPAG Trigger: ACCTGCTGGATGACCTTGTCACCCGAGAGAGACTGC...AGATATCAAATTGTAACTTTTACATAATAGAAAGGCCTGGACCAGGCAGCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021286.11 |
||
| CDS-3UTR GCA 90 bp | TGGGTGACTCTGATGCAAAGTGCCACAGTTATGAGTGAATTAGGCAAAGCTAGTCTCATTCTTAAACGATaGCAGGAGCAGTCTCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: WVTLMQSATVMSELGKASLILKR*QEQSLS Trigger: CGAGAGAGACTGCTCCTGGCATCGTTTAAGAATGAG...ACTAGCTTTGCCTAATTCACTCATAACTGTGGCACTTTGCATCAGAGTCACCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021286.11 |
||
| CDS-3UTR TCA 90 bp | CACAAAGCACTGACAGAAAGCATTAGCTTCCTGCCTGTCAAGGTTATACCCAAAAAACCAAGTCCTCCTTaGGCTGTGGAAAAATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HKALTESISFLPVKVIPKKPSPP*AVEKSG Trigger: TCCAGATTTTTCCACAGCTCAAGGAGGACTTGGTTT...TTTGGGTATAACCTTGACAGGCAGGAAGCTAATGCTTTCTGTCAGTGCTTTGTG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000108675.2 |
||
| 3UTR CAA 72 bp | AGGACCCATTGGTTCCTATCATCCACATTCAGTGACTaGAAACCACCATTAACTTCAAGTCCAACTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RTHWFLSSTFSD*KPPLTSSPTAS Trigger: AGAGGCAGTTGGACTTGAAGTTAATGGTGGTTTCAAGTCACTGAATGTGGATGATAGGAACCAATGGGTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021286.11 |
||
| CDS-3UTR CCA 90 bp | AAAAAGCAAAAAGGATGTTATTGGGCACGAAGCAGATTACAAGACATCCCAAGGGTGGAAATGTTTACATaGATACATCTGGCGTGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: KKQKGCYWARSRLQDIPRVEMFT*IHLACR Trigger: TCGACACGCCAGATGTATCCATGTAAACATTTCCAC...CCTTGGGATGTCTTGTAATCTGCTTCGTGCCCAATAACATCCTTTTTGCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000108675.2 |
||
| CDS-3UTR TCA 90 bp | GTAAGCTGCCTGGTCCAGGCCTTTCTATTATGTAAAAGTTACAATTTGATATCTATTTCTTGGGCTATCTaGCACGTAGAATCGTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: VSCLVQAFLLCKSYNLISISWAI*HVESYV Trigger: CACATACGATTCTACGTGTCAGATAGCCCAAGAAAT...AGATATCAAATTGTAACTTTTACATAATAGAAAGGCCTGGACCAGGCAGCTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021286.11 |
||
| CDS-3UTR CAA 90 bp | ACATGGCTTCAGAGCCAGTGGAGAGGCTGGACGGAGGCAGCACTTCCTGCTTTATGGGAGTTCCTCGCTTaGCTTCTTCGCTCATCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TWLQSQWRGWTEAALPALWEFLA*LLRSSG Trigger: GCCTGATGAGCGAAGAAGCAAAGCGAGGAACTCCCA...TAAAGCAGGAAGTGCTGCCTCCGTCCAGCCTCTCCACTGGCTCTGAAGCCATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| CDS GCA 90 bp | GCTGGACCTGATCAGATCCGGCTCTGCACCCTCATTCTTAAACGATaGCAGGAGCAGTCTCTCTCGGGTGACAAGGTCATCCAGCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: AGPDQIRLCTLILKR*QEQSLSGDKVIQQV Trigger: AACCTGCTGGATGACCTTGTCACCCGAGAGAGACTGCTCCTGGCATCGTTTAAGAATGAGGGTGCAGAGCCGGATCTGATCAGGTCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| CDS-3UTR CAA 90 bp | AGTGGAGAGGCTGGACGGAGGCAGCACTTCCTGCTTTATAACCAGGCTTTCCTCTCACAGAGCCAAGGGTaGGGAGTTCCTCGCTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SGEAGRRQHFLLYNQAFLSQSQG*GVPRFA Trigger: AGCAAAGCGAGGAACTCCCAACCCTTGGCTCTGTGA...GAGGAAAGCCTGGTTATAAAGCAGGAAGTGCTGCCTCCGTCCAGCCTCTCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| CDS-3UTR CAA 90 bp | GCTTTCCTCCTGCGCTCCCCTGCCCATGGTATACAGAAGGGAAGGAACTTGTCCTCATCCCACAGGAAGTaGACTTTCTGTCCACCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: AFLLRSPAHGIQKGRNLSSSHRK*TFCPPG Trigger: CCCTGGTGGACAGAAAGTCAACTTCCTGTGGGATGA...GGACAAGTTCCTTCCCTTCTGTATACCATGGGCAGGGGAGCGCAGGAGGAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| CDS GCA 90 bp | GAGATACAGGGACACAGAGATGCCGAGACTGATCAGATCCGGCTCTaGACCCTCATTCTTAAACGATGCCAGGAGCAGTCTCTCTCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: EIQGHRDAETDQIRL*TLILKRCQEQSLSG Trigger: ACCCGAGAGAGACTGCTCCTGGCATCGTTTAAGAATGAGGGTGCAGAGCCGGATCTGATCAGTCTCGGCATCTCTGTGTCCCTGTATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021286.11 |
||
| CDS-3UTR CAA 90 bp | GGAACTTGTCCGGGGTCACACAATGCCCTGACTGGGCCTAGAGCCCATTCGGCCAATTTCCTGGCCCATTaGTTTTTGGCGACTTATGAT | + |
|
Preference number: 5 (lower is better) Translates to: GTCPGSHNALTGPRAHSANFLAH*FLATYD Trigger: ATCATAAGTCGCCAAAAACAAATGGGCCAGGAAATT...GGCCGAATGGGCTCTAGGCCCAGTCAGGGCATTGTGTGACCCCGGACAAGTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| CDS-3UTR CAA 90 bp | GCCAGTGTCTTCCTGAAAAGGGCTTTCAGTGCAACTGAGCCAGGCCTTCGTGGCAATTTTCTGCTGCTGTaGTCGGATCTCATCAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: ASVFLKRAFSATEPGLRGNFLLL*SDLIKT Trigger: GGTTTTGATGAGATCCGACAACAGCAGCAGAAAATT...GCCACGAAGGCCTGGCTCAGTTGCACTGAAAGCCCTTTTCAGGAAGACACTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| CDS-3UTR CAA 90 bp | AGCACTGTTGGGCATCTAAGCTTTGTGGGAAATTACACATGGTGGCTGACAGAGACCCGCGTCCTGTTCTaGAATAATTTTCTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: STVGHLSFVGNYTWWLTETRVLF*NNFLLL Trigger: CAGCAGCAGAAAATTATTCAAGAACAGGACGCGGGT...CTCTGTCAGCCACCATGTGTAATTTCCCACAAAGCTTAGATGCCCAACAGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| CDS-3UTR CAA 90 bp | AGGCCAGGACACACAGTTTCCTCTGCTACCAAGAGTCATATTTTTGGCCTGAACGAAACCAAGTCCTCCTaGAGCTGTGGAAAAATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RPGHTVSSATKSHIFGLNETKSS*SCGKIW Trigger: CCAGATTTTTCCACAGCTCAAGGAGGACTTGGTTTC...GTTCAGGCCAAAAATATGACTCTTGGTAGCAGAGGAAACTGTGTGTCCTGGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000108675.2 |
||
| CDS TCA 72 bp | ACCGAGGTGCTGCCACTGATGCTCAGCTGGAACTGGTaGGAGATACAGGGACACAGAGATGCCGAGACTGAT | + |
|
Preference number: 6 (lower is better) Translates to: TEVLPLMLSWNW*EIQGHRDAETD Trigger: ATCAGTCTCGGCATCTCTGTGTCCCTGTATCTCTCACCAGTTCCAGCTGAGCATCAGTGGCAGCACCTCGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021286.11 |
||
| CDS GCA 72 bp | CTCCTCACAGAGCCAAGGGTTGGGAGTTCCTCGCTTTaGTTCTTCGCTCATCAGGCTGGACCTGATCAGATC | + |
|
Preference number: 6 (lower is better) Translates to: LLTEPRVGSSSL*FFAHQAGPDQI Trigger: GATCTGATCAGGTCCAGCCTGATGAGCGAAGAAGCAAAGCGAGGAACTCCCAACCCTTGGCTCTGTGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| CDS GCA 72 bp | GATCAGATCCGGCTCTGCACCCTCATTCTTAAACGATaGCAGGAGCAGTCTCTCTCGGGTGACAAGGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: DQIRLCTLILKR*QEQSLSGDKVI Trigger: GATGACCTTGTCACCCGAGAGAGACTGCTCCTGGCATCGTTTAAGAATGAGGGTGCAGAGCCGGATCTGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021285.14 ENSMUST00000021286.11 |
||
| CDS GCA 72 bp | TTCGCTCATCAGGCTGGACCTGATCAGATCCGGCTCTaGACCCTCATTCTTAAACGATGCCAGGAGCAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: FAHQAGPDQIRL*TLILKRCQEQS Trigger: AGACTGCTCCTGGCATCGTTTAAGAATGAGGGTGCAGAGCCGGATCTGATCAGGTCCAGCCTGATGAGCGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| CDS GCA 72 bp | GGACACAGAGATGCCGAGACTGATCAGATCCGGCTCTaGACCCTCATTCTTAAACGATGCCAGGAGCAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GHRDAETDQIRL*TLILKRCQEQS Trigger: AGACTGCTCCTGGCATCGTTTAAGAATGAGGGTGCAGAGCCGGATCTGATCAGTCTCGGCATCTCTGTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021286.11 |
||
| CDS CAA 72 bp | TCAGTTCGAAGCTTCTCATCTGTGTTCTCAACGAGGTaGGCAAGGTCATCGATGATCTCATTCTGTTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: SVRSFSSVFSTR*ARSSMISFCSS Trigger: GGATGAACAGAATGAGATCATCGATGACCTTGCCAACCTCGTTGAGAACACAGATGAGAAGCTTCGAACTGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
||
| CDS CAA 90 bp | TCTTCTTTCACACTGATTTCGTTCTTGAATCTTCTCAGCGATTTCTaGGGCTATCTGACACGTAGAATCGTATGTGGAGAACCAGGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SSFTLISFLNLLSDF*GYLTRRIVCGEPGV Trigger: GACCCCTGGTTCTCCACATACGATTCTACGTGTCAGATAGCCCAAGAAATCGCTGAGAAGATTCAAGAACGAAATCAGTGTGAAAGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021285.14 ENSMUST00000021286.11 ENSMUST00000108675.2 |
||
| CDS TCA 72 bp | CATCTGTGTTCTCAACGAGGTTGGCAAGGTCATCGATaGTCTCATTCTGTTCATCCAGTTCGTTCCCAATTT | + |
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Preference number: 6 (lower is better) Translates to: HLCSQRGWQGHR*SHSVHPVRSQF Trigger: AAATTGGGAACGAACTGGATGAACAGAATGAGATCATCGATGACCTTGCCAACCTCGTTGAGAACACAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021285.14 |
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| CDS CAA 72 bp | ACACTGATTTCGTTCTTGAATCTTCTCAGCGATTTCTaGGGCTATCTGACACGTAGAATCGTATGTGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: TLISFLNLLSDF*GYLTRRIVCGE Trigger: TTCTCCACATACGATTCTACGTGTCAGATAGCCCAAGAAATCGCTGAGAAGATTCAAGAACGAAATCAGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021285.14 ENSMUST00000021286.11 ENSMUST00000108675.2 |
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