Pregenerated sensors for STX7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019998Ensembl transcript IDs: ENSMUST00000020174.7, ENSMUST00000220041.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGCTACAGGGGCAGGTGGAAGAGAAGACCTTGTGGGAGCCGGCCTaGCAGGCTGGCACTCATCTGGAAGCATGTGTATACATTGCTCCT | + |
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Preference number: 1 (lower is better) Translates to: KLQGQVEEKTLWEPA*QAGTHLEACVYIAP Trigger: AGGAGCAATGTATACACATGCTTCCAGATGAGTGCCAGCCTGCCAGGCCGGCTCCCACAAGGTCTTCTCTTCCACCTGCCCCTGTAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| 3UTR CCA 90 bp | TGTTTGACACACAAGCTACAGGGGCAGGTGGAAGAGAAGACCTTGTaGGAGCCGGCCTGGCAGGCTGGCACTCATCTGGAAGCATGTGTA | + |
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Preference number: 1 (lower is better) Translates to: CLTHKLQGQVEEKTL*EPAWQAGTHLEACV Trigger: TACACATGCTTCCAGATGAGTGCCAGCCTGCCAGGCCGGCTCCCACAAGGTCTTCTCTTCCACCTGCCCCTGTAGCTTGTGTGTCAAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| 3UTR TCA 90 bp | AGATGGCTCGGCGGTCAAGAGCACCGACTACTCTTCCAGAGGTTCTaGGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGT | + |
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Preference number: 1 (lower is better) Translates to: RWLGGQEHRLLFQRF*VQFPATTWWLTTIC Trigger: ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGAACCTCTGGAAGAGTAGTCGGTGCTCTTGACCGCCGAGCCATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| 3UTR TCA 90 bp | CTGGCAGGCTGGCACTCATCTGGAAGCATGTGTATACATTGCTCCTaGCCACCCATGAAAACAGTAGGAGCCGGGCACCAGAAAACTTCA | + |
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Preference number: 1 (lower is better) Translates to: LAGWHSSGSMCIHCS*PPMKTVGAGHQKTS Trigger: TGAAGTTTTCTGGTGCCCGGCTCCTACTGTTTTCATGGGTGGTCAGGAGCAATGTATACACATGCTTCCAGATGAGTGCCAGCCTGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| 3UTR GCA 90 bp | AAAACAAAACCTCCCAGCAGAAATATGTGGAATGTCCCACCATGGTaGATAGTCAGCAGCAAATGTCTGGGAAGCCTGGGCTCCAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: KTKPPSRNMWNVPPW*IVSSKCLGSLGSRE Trigger: TTCCCTGGAGCCCAGGCTTCCCAGACATTTGCTGCTGACTATGCACCATGGTGGGACATTCCACATATTTCTGCTGGGAGGTTTTGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| 3UTR CCA 90 bp | CAGCAGCAAATGTCTGGGAAGCCTGGGCTCCAGGGAAAGAGTTCTTaGGACTCAGAATTAGCAGACATCTCCAGAATCATCTTTATTCTG | + |
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Preference number: 1 (lower is better) Translates to: QQQMSGKPGLQGKSS*DSELADISRIIFIL Trigger: CAGAATAAAGATGATTCTGGAGATGTCTGCTAATTCTGAGTCCCAAGAACTCTTTCCCTGGAGCCCAGGCTTCCCAGACATTTGCTGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| 3UTR CCA 90 bp | AAGTTGCTAAGTTACGCCCCGATTTTTGAAAGAGCTCTGCTGTTGTaGGGCATCCACTATGAAGAGAACAGGAACAAATGGGTGTGGTCC | + |
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Preference number: 1 (lower is better) Translates to: KLLSYAPIFERALLL*GIHYEENRNKWVWS Trigger: GGACCACACCCATTTGTTCCTGTTCTCTTCATAGTGGATGCCCCACAACAGCAGAGCTCTTTCAAAAATCGGGGCGTAACTTAGCAACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGGGGCAGGTGGAAGAGAAGACCTTGTGGGAGCCGGCCTGGCAGGCTGGCACACACAGTTACAGAGGTaGAGGCAGAGTATACACGCC | + |
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Preference number: 2 (lower is better) Translates to: TGAGGREDLVGAGLAGWHTQLQR*RQSIHA Trigger: GGCGTGTATACTCTGCCTGCACCTCTGTAACTGTGT...GTGCCAGCCTGCCAGGCCGGCTCCCACAAGGTCTTCTCTTCCACCTGCCCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGGGCAGGTGGAAGAGAAGACCTTGTGGGAGCCGGCCTGGCAGGCTGGCACCCCAGCAGAAATATGTaGAATGTCCCACCATGGTGC | + |
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Preference number: 2 (lower is better) Translates to: TGAGGREDLVGAGLAGWHPSRNM*NVPPWC Trigger: GCACCATGGTGGGACATTCCACATATTTCTGCTGGG...GTGCCAGCCTGCCAGGCCGGCTCCCACAAGGTCTTCTCTTCCACCTGCCCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGGGCAGGTGGAAGAGAAGACCTTGTGGGAGCCGGCCTGGCAGGCTGGCACTTCCCAGCAACCACATaGTGGCTCACAACCATCTGT | + |
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Preference number: 2 (lower is better) Translates to: TGAGGREDLVGAGLAGWHFPATT*WLTTIC Trigger: ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAA...GTGCCAGCCTGCCAGGCCGGCTCCCACAAGGTCTTCTCTTCCACCTGCCCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| 3UTR CAA 90 bp | CACTGTTTGACACACAAGCTACAGGGGCAGGTGGAAGAGAAGACCTaGTGGGAGCCGGCCTGGCAGGCTGGCACTCATCTGGAAGCATGT | + |
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Preference number: 2 (lower is better) Translates to: HCLTHKLQGQVEEKT*WEPAWQAGTHLEAC Trigger: ACATGCTTCCAGATGAGTGCCAGCCTGCCAGGCCGGCTCCCACAAGGTCTTCTCTTCCACCTGCCCCTGTAGCTTGTGTGTCAAACAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| 3UTR-3UTR CCA 90 bp | GGCAGCACACTGTTTGACACACAAGCTACAGGGGCAGGTGGAAGAGAAGACCTTGCCGGCCTGGCAGGCTaGCACTCATCTGGAAGCATG | + |
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Preference number: 2 (lower is better) Translates to: GSTLFDTQATGAGGREDLAGLAG*HSSGSM Trigger: CATGCTTCCAGATGAGTGCCAGCCTGCCAGGCCGGC...AAGGTCTTCTCTTCCACCTGCCCCTGTAGCTTGTGTGTCAAACAGTGTGCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| 3UTR CAA 90 bp | AGCCGGCCTGGCAGGCTGGCACTCATCTGGAAGCATGTGTATACATaGCTCCTGACCACCCATGAAAACAGTAGGAGCCGGGCACCAGAA | + |
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Preference number: 2 (lower is better) Translates to: SRPGRLALIWKHVYT*LLTTHENSRSRAPE Trigger: TTCTGGTGCCCGGCTCCTACTGTTTTCATGGGTGGTCAGGAGCAATGTATACACATGCTTCCAGATGAGTGCCAGCCTGCCAGGCCGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| 3UTR-3UTR TCA 90 bp | CACTGTTTGACACACAAGCTACAGGGGCAGGTGGAAGAGAAGACCTTGTGGGAGCTCTTCCAGAGGTTCTaGGTTCAATTCCCAGCAACC | + |
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Preference number: 2 (lower is better) Translates to: HCLTHKLQGQVEEKTLWELFQRF*VQFPAT Trigger: GGTTGCTGGGAATTGAACTCAGAACCTCTGGAAGAG...CTCCCACAAGGTCTTCTCTTCCACCTGCCCCTGTAGCTTGTGTGTCAAACAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| 3UTR-3UTR TCA 90 bp | ACACTGTTTGACACACAAGCTACAGGGGCAGGTGGAAGAGAAGACCTTGTGGGAAACGATAAGAGAAAGTaGTCGCAAGAATCTGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: TLFDTQATGAGGREDLVGNDKRK*SQESAC Trigger: GCAGGCAGATTCTTGCGATCACTTTCTCTTATCGTT...TCCCACAAGGTCTTCTCTTCCACCTGCCCCTGTAGCTTGTGTGTCAAACAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| 3UTR-3UTR TCA 90 bp | ACACTGTTTGACACACAAGCTACAGGGGCAGGTGGAAGAGAAGACCTTGTGGGATGTCCTCTTCTGGTCTaGAGACAGCTACAATGTGTA | + |
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Preference number: 2 (lower is better) Translates to: TLFDTQATGAGGREDLVGCPLLV*RQLQCV Trigger: TACACATTGTAGCTGTCTTCAGACCAGAAGAGGACA...TCCCACAAGGTCTTCTCTTCCACCTGCCCCTGTAGCTTGTGTGTCAAACAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| 3UTR-3UTR TCA 90 bp | GGCAGCACACTGTTTGACACACAAGCTACAGGGGCAGGTGGAAGAGAAGACCTTAAACATGTTAACCAGTaGTCCAGAAATATGTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: GSTLFDTQATGAGGREDLKHVNQ*SRNMWG Trigger: CCCCCACATATTTCTGGATCACTGGTTAACATGTTT...AAGGTCTTCTCTTCCACCTGCCCCTGTAGCTTGTGTGTCAAACAGTGTGCTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| 3UTR-3UTR TCA 90 bp | CCGATTTTTGAAAGAGCTCTGCTGTTGTGGGGCATCCACTATGAAGAGAACAGGTTTAACAGATGCCACTaGGACTCTCCTCCAGCTAGG | + |
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Preference number: 2 (lower is better) Translates to: PIFERALLLWGIHYEENRFNRCH*DSPPAR Trigger: CCTAGCTGGAGGAGAGTCTCAGTGGCATCTGTTAAA...CCTGTTCTCTTCATAGTGGATGCCCCACAACAGCAGAGCTCTTTCAAAAATCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| 3UTR CAA 90 bp | TCAGCAGCAAATGTCTGGGAAGCCTGGGCTCCAGGGAAAGAGTTCTaGGGACTCAGAATTAGCAGACATCTCCAGAATCATCTTTATTCT | + |
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Preference number: 2 (lower is better) Translates to: SAANVWEAWAPGKEF*GLRISRHLQNHLYS Trigger: AGAATAAAGATGATTCTGGAGATGTCTGCTAATTCTGAGTCCCAAGAACTCTTTCCCTGGAGCCCAGGCTTCCCAGACATTTGCTGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| 3UTR-3UTR GCA 90 bp | ACGAGGGAAGGTATAATGGCCACAAAGCCAGACCATATGGTGAAAGTGGTTCAGTCTGAACAGAATAGATaGAGGTATGGACCTTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: TREGIMATKPDHMVKVVQSEQNR*RYGPFS Trigger: GCTGAAAGGTCCATACCTGCATCTATTCTGTTCAGA...CTGAACCACTTTCACCATATGGTCTGGCTTTGTGGCCATTATACCTTCCCTCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTACACATGTTACACAGTTACAGAGGTGCAGGCAGAGTATACACGCCAATCAAACGATAAGAGAAAGTaGTCGCAAGAATCTGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: CYTCYTVTEVQAEYTRQSNDKRK*SQESAC Trigger: GCAGGCAGATTCTTGCGATCACTTTCTCTTATCGTT...TGATTGGCGTGTATACTCTGCCTGCACCTCTGTAACTGTGTAACATGTGTAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| 3UTR-3UTR TCA 90 bp | GGTTTCAGAGCCACATTAAACAGTGCCATCATTAGCAAACTGCTGTGTAAGAACGGGAACATTACTTTGTaGAGACAGGACCCAAAGATA | + |
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Preference number: 2 (lower is better) Translates to: GFRATLNSAIISKLLCKNGNITL*RQDPKI Trigger: TATCTTTGGGTCCTGTCTTCACAAAGTAATGTTCCC...GTTCTTACACAGCAGTTTGCTAATGATGGCACTGTTTAATGTGGCTCTGAAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| 3UTR-3UTR GCA 90 bp | GGTTTCAGAGCCACATTAAACAGTGCCATCATTAGCAAACTGCTGTGTAAGAACTCTGAACAGAATAGATaGAGGTATGGACCTTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: GFRATLNSAIISKLLCKNSEQNR*RYGPFS Trigger: GCTGAAAGGTCCATACCTGCATCTATTCTGTTCAGA...GTTCTTACACAGCAGTTTGCTAATGATGGCACTGTTTAATGTGGCTCTGAAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| 3UTR-3UTR GCA 90 bp | ATGGGAACATTACTTTGTGAAGACAGGACCCAAAGATACAGGCCTAAGAAGTGTGTGAAAGTGGTTCAGTaGAGTAAGAGACTGGAATCT | + |
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Preference number: 2 (lower is better) Translates to: MGTLLCEDRTQRYRPKKCVKVVQ*SKRLES Trigger: AGATTCCAGTCTCTTACTGCACTGAACCACTTTCAC...ACACTTCTTAGGCCTGTATCTTTGGGTCCTGTCTTCACAAAGTAATGTTCCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGGAACATTACTTTGTGAAGACAGGACCCAAAGATACAGGCCTAAGAAGTGTAAACCTAACAGTTGTTaGACTAAAAAGCAGGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: MGTLLCEDRTQRYRPKKCKPNSC*TKKQGS Trigger: GCTTCCCTGCTTTTTAGTTCAACAACTGTTAGGTTT...ACACTTCTTAGGCCTGTATCTTTGGGTCCTGTCTTCACAAAGTAATGTTCCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| 3UTR-3UTR TCA 90 bp | GGTTTCAGAGCCACATTAAACAGTGCCATCATTAGCAAACTGCTGTGTAAGAACAAACCTAACAGTTGTTaGACTAAAAAGCAGGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: GFRATLNSAIISKLLCKNKPNSC*TKKQGS Trigger: GCTTCCCTGCTTTTTAGTTCAACAACTGTTAGGTTT...GTTCTTACACAGCAGTTTGCTAATGATGGCACTGTTTAATGTGGCTCTGAAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| 3UTR-3UTR GCA 90 bp | GTCCATAATGTTAAAAACAACCTATCCTTACTGTCTTTACTAGGTAATCCACAGACACAGTTACAGAGGTaGAGGCAGAGTATACACGCC | + |
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Preference number: 2 (lower is better) Translates to: VHNVKNNLSLLSLLGNPQTQLQR*RQSIHA Trigger: GGCGTGTATACTCTGCCTGCACCTCTGTAACTGTGT...CTGTGGATTACCTAGTAAAGACAGTAAGGATAGGTTGTTTTTAACATTATGGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| 3UTR CCA 72 bp | GGGCAGGTGGAAGAGAAGACCTTGTGGGAGCCGGCCTaGCAGGCTGGCACTCATCTGGAAGCATGTGTATAC | + |
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Preference number: 3 (lower is better) Translates to: GQVEEKTLWEPA*QAGTHLEACVY Trigger: GTATACACATGCTTCCAGATGAGTGCCAGCCTGCCAGGCCGGCTCCCACAAGGTCTTCTCTTCCACCTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| 3UTR CCA 72 bp | CCTTGTGGGAGCCGGCCTGGCAGGCTGGCACTCATCTaGAAGCATGTGTATACATTGCTCCTGACCACCCAT | + |
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Preference number: 3 (lower is better) Translates to: PCGSRPGRLALI*KHVYTLLLTTH Trigger: ATGGGTGGTCAGGAGCAATGTATACACATGCTTCCAGATGAGTGCCAGCCTGCCAGGCCGGCTCCCACAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| 3UTR CCA 72 bp | GGAAGAGAAGACCTTGTGGGAGCCGGCCTGGCAGGCTaGCACTCATCTGGAAGCATGTGTATACATTGCTCC | + |
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Preference number: 3 (lower is better) Translates to: GREDLVGAGLAG*HSSGSMCIHCS Trigger: GGAGCAATGTATACACATGCTTCCAGATGAGTGCCAGCCTGCCAGGCCGGCTCCCACAAGGTCTTCTCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| 3UTR TCA 72 bp | TGCCTTGGGAGCACAGAGCCATTTAACAGATGCCACTaGGACTCTCCTCCAGCTAGGAGATGGCAGCACACT | + |
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Preference number: 3 (lower is better) Translates to: CLGSTEPFNRCH*DSPPARRWQHT Trigger: AGTGTGCTGCCATCTCCTAGCTGGAGGAGAGTCTCAGTGGCATCTGTTAAATGGCTCTGTGCTCCCAAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| 3UTR TCA 72 bp | TGGCACTCATCTGGAAGCATGTGTATACATTGCTCCTaGCCACCCATGAAAACAGTAGGAGCCGGGCACCAG | + |
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Preference number: 3 (lower is better) Translates to: WHSSGSMCIHCS*PPMKTVGAGHQ Trigger: CTGGTGCCCGGCTCCTACTGTTTTCATGGGTGGTCAGGAGCAATGTATACACATGCTTCCAGATGAGTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| 3UTR CCA 72 bp | ATGTCTGGGAAGCCTGGGCTCCAGGGAAAGAGTTCTTaGGACTCAGAATTAGCAGACATCTCCAGAATCATC | + |
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Preference number: 3 (lower is better) Translates to: MSGKPGLQGKSS*DSELADISRII Trigger: GATGATTCTGGAGATGTCTGCTAATTCTGAGTCCCAAGAACTCTTTCCCTGGAGCCCAGGCTTCCCAGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| 3UTR CCA 72 bp | AGTTACGCCCCGATTTTTGAAAGAGCTCTGCTGTTGTaGGGCATCCACTATGAAGAGAACAGGAACAAATGG | + |
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Preference number: 3 (lower is better) Translates to: SYAPIFERALLL*GIHYEENRNKW Trigger: CCATTTGTTCCTGTTCTCTTCATAGTGGATGCCCCACAACAGCAGAGCTCTTTCAAAAATCGGGGCGTAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| 3UTR GCA 72 bp | GCCACAAAGCCAGACCATATGGTGAAAGTGGTTCAGTaGAGTAAGAGACTGGAATCTTTAGCATCTGAACAG | + |
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Preference number: 3 (lower is better) Translates to: ATKPDHMVKVVQ*SKRLESLASEQ Trigger: CTGTTCAGATGCTAAAGATTCCAGTCTCTTACTGCACTGAACCACTTTCACCATATGGTCTGGCTTTGTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| 3UTR GCA 72 bp | TGCAATCATGTTACACATGTTACACAGTTACAGAGGTaGAGGCAGAGTATACACGCCAATCAAATAATTCCC | + |
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Preference number: 3 (lower is better) Translates to: CNHVTHVTQLQR*RQSIHANQIIP Trigger: GGGAATTATTTGATTGGCGTGTATACTCTGCCTGCACCTCTGTAACTGTGTAACATGTGTAACATGATTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| 3UTR-3UTR CAA 90 bp | GGTTTCAGAGCCACATTAAACAGTGCCATCATTAGCAAACTGCTGTGTAAGAACGTTAAGGGTTTCCTATaGAGAACATTTACTGGACAA | + |
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Preference number: 3 (lower is better) Translates to: GFRATLNSAIISKLLCKNVKGFL*RTFTGQ Trigger: TTGTCCAGTAAATGTTCTCAATAGGAAACCCTTAAC...GTTCTTACACAGCAGTTTGCTAATGATGGCACTGTTTAATGTGGCTCTGAAACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS-3UTR GCA 90 bp | ACAGGGGCAGGTGGAAGAGAAGACCTTGTGGGAGCCGGCCTGGCAGGCTGGCACTTCTGCTGCAGCTGTTaGCTCAGTTCCGGTGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: TGAGGREDLVGAGLAGWHFCCSC*LSSGES Trigger: AGACTCACCGGAACTGAGGCAACAGCTGCAGCAGAA...GTGCCAGCCTGCCAGGCCGGCTCCCACAAGGTCTTCTCTTCCACCTGCCCCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| CDS-3UTR TCA 90 bp | ACAGGGGCAGGTGGAAGAGAAGACCTTGTGGGAGCCGGCCTGGCAGGCTGGCACACTCTCTCTCATGAATaGGTCGGAGGTCATCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: TGAGGREDLVGAGLAGWHTLSHE*VGGHPL Trigger: CAGAGGATGACCTCCGACTCATTCATGAGAGAGAGT...GTGCCAGCCTGCCAGGCCGGCTCCCACAAGGTCTTCTCTTCCACCTGCCCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| CDS-3UTR GCA 90 bp | AAGAGAAGACCTTGTGGGAGCCGGCCTGGCAGGCTGGCACTCATCTGGAAGCATTCTCTCTCAGCAGCCTaGCTCTGGGCCTTCTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: KRRPCGSRPGRLALIWKHSLSAA*LWAFWK Trigger: CTTCCAGAAGGCCCAGAGGCAGGCTGCTGAGAGAGA...ATGCTTCCAGATGAGTGCCAGCCTGCCAGGCCGGCTCCCACAAGGTCTTCTCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| CDS-3UTR CCA 90 bp | GGCAGCACACTGTTTGACACACAAGCTACAGGGGCAGGTGGAAGAGAAGACCTTTCTGACGCTGCTCACTaGGGGTGGTGGGCAGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: GSTLFDTQATGAGGREDLSDAAH*GWWAES Trigger: GCTCTCTGCCCACCACCCCCAGTGAGCAGCGTCAGA...AAGGTCTTCTCTTCCACCTGCCCCTGTAGCTTGTGTGTCAAACAGTGTGCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| CDS-3UTR CCA 90 bp | GAAAGTGATCGCAAGAATCTGCCTGCATCGCTCAGACAGCATCATGCAGTCGTCGCTGCTCACTGGGGGTaGTGGGCAGAGAGCCAAACT | + |
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Preference number: 4 (lower is better) Translates to: ESDRKNLPASLRQHHAVVAAHWG*WAESQT Trigger: AGTTTGGCTCTCTGCCCACCACCCCCAGTGAGCAGC...GACGACTGCATGATGCTGTCTGAGCGATGCAGGCAGATTCTTGCGATCACTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS-3UTR GCA 90 bp | AATGTCCCACCATGGTGCATAGTCAGCAGCAAATGTCTGGGAAGCCTGGGCTCCTACTGCTGCTTCTGCTaGAGCTGTTGCCTCAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: NVPPWCIVSSKCLGSLGSYCCFC*SCCLSS Trigger: GGAACTGAGGCAACAGCTGCAGCAGAAGCAGCAGTA...GGAGCCCAGGCTTCCCAGACATTTGCTGCTGACTATGCACCATGGTGGGACATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| 3UTR CAA 72 bp | GGCAGGCTGGCACTCATCTGGAAGCATGTGTATACATaGCTCCTGACCACCCATGAAAACAGTAGGAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: GRLALIWKHVYT*LLTTHENSRSR Trigger: CCGGCTCCTACTGTTTTCATGGGTGGTCAGGAGCAATGTATACACATGCTTCCAGATGAGTGCCAGCCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| CDS-3UTR CCA 90 bp | GAAAGTGATCGCAAGAATCTGCCTGCATCGCTCAGACAGCATCATGCAGTCGTCTCAGCAGCCTGCCTCTaGGCCTTCTGGAAGTTTGTC | + |
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Preference number: 4 (lower is better) Translates to: ESDRKNLPASLRQHHAVVSAACL*AFWKFV Trigger: GACAAACTTCCAGAAGGCCCAGAGGCAGGCTGCTGA...GACGACTGCATGATGCTGTCTGAGCGATGCAGGCAGATTCTTGCGATCACTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS-3UTR TCA 90 bp | CGCACGAGGGAAGGTATAATGGCCACAAAGCCAGACCATATGGTGAAAGTGGTTTTGCCTCAGTTCCGGTaGGTCTTGAGGTGTTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: RTREGIMATKPDHMVKVVLPQFR*VLRCSK Trigger: CTTGGAACACCTCAAGACTCACCGGAACTGAGGCAA...AACCACTTTCACCATATGGTCTGGCTTTGTGGCCATTATACCTTCCCTCGTGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS-3UTR TCA 90 bp | CCGATTTTTGAAAGAGCTCTGCTGTTGTGGGGCATCCACTATGAAGAGAACAGGATAGTCTGCCGCTCTTaGCAGCTGCTGGTTTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PIFERALLLWGIHYEENRIVCRS*QLLVCL Trigger: CAGGCAAACCAGCAGCTGTCAAGAGCGGCAGACTAT...CCTGTTCTCTTCATAGTGGATGCCCCACAACAGCAGAGCTCTTTCAAAAATCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGTGATCGCAAGAATCTGCCTGCATCGCTCAGACAGCATCATGCAGTCGTCGTATACTGCTGCTTCTaGTGCAGCTGTTGCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ESDRKNLPASLRQHHAVVVYCCF*CSCCLS Trigger: ACTGAGGCAACAGCTGCAGCAGAAGCAGCAGTATAC...GACGACTGCATGATGCTGTCTGAGCGATGCAGGCAGATTCTTGCGATCACTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR CCA 90 bp | AAGAGAAGACCTTGTGGGAGCCGGCCTGGCAGGCTGGCACTCATCTGGAAGCATCATTGTGTGATCTTTTaGATGTTAGAGGAGATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KRRPCGSRPGRLALIWKHHCVIF*MLEEMR Trigger: ACGCATCTCCTCTAACATCCAAAAGATCACACAATG...ATGCTTCCAGATGAGTGCCAGCCTGCCAGGCCGGCTCCCACAAGGTCTTCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
||
| 3UTR CAA 72 bp | GAACAAATGGGTGTGGTCCCACGAGGATTAACTGCCTaGGGAGCACAGAGCCATTTAACAGATGCCACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EQMGVVPRGLTA*GAQSHLTDATE Trigger: CTCAGTGGCATCTGTTAAATGGCTCTGTGCTCCCAAGGCAGTTAATCCTCGTGGGACCACACCCATTTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
||
| CDS-3UTR TCA 90 bp | CGCACGAGGGAAGGTATAATGGCCACAAAGCCAGACCATATGGTGAAAGTGGTTTTGTCAGCGATGTGGTaGACTCTGCCACTAATCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RTREGIMATKPDHMVKVVLSAMW*TLPLIG Trigger: ACCGATTAGTGGCAGAGTTCACCACATCGCTGACAA...AACCACTTTCACCATATGGTCTGGCTTTGTGGCCATTATACCTTCCCTCGTGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR TCA 90 bp | CGCACGAGGGAAGGTATAATGGCCACAAAGCCAGACCATATGGTGAAAGTGGTTGAAGACTCTCTCTCATaGATGAGTCGGAGGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RTREGIMATKPDHMVKVVEDSLS*MSRRSS Trigger: GGATGACCTCCGACTCATTCATGAGAGAGAGTCTTC...AACCACTTTCACCATATGGTCTGGCTTTGTGGCCATTATACCTTCCCTCGTGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR TCA 90 bp | ATAAGAGAAAGTGATCGCAAGAATCTGCCTGCATCGCTCAGACAGCATCATGCAATAGTCTGCCGCTCTTaGCAGCTGCTGGTTTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IRESDRKNLPASLRQHHAIVCRS*QLLVCL Trigger: CAGGCAAACCAGCAGCTGTCAAGAGCGGCAGACTAT...TGCATGATGCTGTCTGAGCGATGCAGGCAGATTCTTGCGATCACTTTCTCTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR GCA 90 bp | ACGAGGGAAGGTATAATGGCCACAAAGCCAGACCATATGGTGAAAGTGGTTCAGTTCTGCTGCAGCTGTTaGCTCAGTTCCGGTGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TREGIMATKPDHMVKVVQFCCSC*LSSGES Trigger: AGACTCACCGGAACTGAGGCAACAGCTGCAGCAGAA...CTGAACCACTTTCACCATATGGTCTGGCTTTGTGGCCATTATACCTTCCCTCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR TCA 90 bp | ACGAGGGAAGGTATAATGGCCACAAAGCCAGACCATATGGTGAAAGTGGTTCAGTTGTCAGCGATGTGGTaGACTCTGCCACTAATCGGT | + |
|
Preference number: 4 (lower is better) Translates to: TREGIMATKPDHMVKVVQLSAMW*TLPLIG Trigger: ACCGATTAGTGGCAGAGTTCACCACATCGCTGACAA...CTGAACCACTTTCACCATATGGTCTGGCTTTGTGGCCATTATACCTTCCCTCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR GCA 90 bp | CGCACGAGGGAAGGTATAATGGCCACAAAGCCAGACCATATGGTGAAAGTGGTTTGGTTAGTATACTGCTaGTTCTGCTGCAGCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RTREGIMATKPDHMVKVVWLVYC*FCCSCC Trigger: GCAACAGCTGCAGCAGAAGCAGCAGTATACTAACCA...AACCACTTTCACCATATGGTCTGGCTTTGTGGCCATTATACCTTCCCTCGTGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| 3UTR CAA 72 bp | AATGTCTGGGAAGCCTGGGCTCCAGGGAAAGAGTTCTaGGGACTCAGAATTAGCAGACATCTCCAGAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: NVWEAWAPGKEF*GLRISRHLQNH Trigger: ATGATTCTGGAGATGTCTGCTAATTCTGAGTCCCAAGAACTCTTTCCCTGGAGCCCAGGCTTCCCAGACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
||
| CDS-3UTR TCA 90 bp | CAACGTGAGCAAAACCTAACAGTTGTTGAACTAAAAAGCAGGGAAGCTGTGCCATTGCCTCAGTTCCGGTaGGTCTTGAGGTGTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QREQNLTVVELKSREAVPLPQFR*VLRCSK Trigger: CTTGGAACACCTCAAGACTCACCGGAACTGAGGCAA...TGGCACAGCTTCCCTGCTTTTTAGTTCAACAACTGTTAGGTTTTGCTCACGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR TCA 90 bp | ATAAGAGAAAGTGATCGCAAGAATCTGCCTGCATCGCTCAGACAGCATCATGCAGAAGACTCTCTCTCATaGATGAGTCGGAGGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: IRESDRKNLPASLRQHHAEDSLS*MSRRSS Trigger: GGATGACCTCCGACTCATTCATGAGAGAGAGTCTTC...TGCATGATGCTGTCTGAGCGATGCAGGCAGATTCTTGCGATCACTTTCTCTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR CCA 90 bp | GTCCATAATGTTAAAAACAACCTATCCTTACTGTCTTTACTAGGTAATCCACAGTCTGACGCTGCTCACTaGGGGTGGTGGGCAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VHNVKNNLSLLSLLGNPQSDAAH*GWWAES Trigger: GCTCTCTGCCCACCACCCCCAGTGAGCAGCGTCAGA...CTGTGGATTACCTAGTAAAGACAGTAAGGATAGGTTGTTTTTAACATTATGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR CCA 90 bp | AAGATAATGCAATCATGTTACACATGTTACACAGTTACAGAGGTGCAGGCAGAGTCAGCAGCCTGCCTCTaGGCCTTCTGGAAGTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KIMQSCYTCYTVTEVQAESAACL*AFWKFV Trigger: GACAAACTTCCAGAAGGCCCAGAGGCAGGCTGCTGA...CTCTGCCTGCACCTCTGTAACTGTGTAACATGTGTAACATGATTGCATTATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR GCA 90 bp | AAGATAATGCAATCATGTTACACATGTTACACAGTTACAGAGGTGCAGGCAGAGTACTGCTGCTTCTGCTaGAGCTGTTGCCTCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KIMQSCYTCYTVTEVQAEYCCFC*SCCLSS Trigger: GGAACTGAGGCAACAGCTGCAGCAGAAGCAGCAGTA...CTCTGCCTGCACCTCTGTAACTGTGTAACATGTGTAACATGATTGCATTATCTT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR CCA 90 bp | AAGATAATGCAATCATGTTACACATGTTACACAGTTACAGAGGTGCAGGCAGAGTGCCTCTGGGCCTTCTaGAAGTTTGTCAGCGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: KIMQSCYTCYTVTEVQAECLWAF*KFVSDV Trigger: CACATCGCTGACAAACTTCCAGAAGGCCCAGAGGCA...CTCTGCCTGCACCTCTGTAACTGTGTAACATGTGTAACATGATTGCATTATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR CCA 90 bp | ACGAGGGAAGGTATAATGGCCACAAAGCCAGACCATATGGTGAAAGTGGTTCAGCCGCACTTTCTACATTaGCTTCTATGCTGTCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: TREGIMATKPDHMVKVVQPHFLH*LLCCQS Trigger: TGATTGACAGCATAGAAGCCAATGTAGAAAGTGCGG...CTGAACCACTTTCACCATATGGTCTGGCTTTGTGGCCATTATACCTTCCCTCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR TCA 90 bp | AGGGAAGCTGTGCCAGTAAGGGTGTTTAGAAAAGCCTTGGGTATTAGAAAATATACTCTCTCTCATGAATaGGTCGGAGGTCATCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: REAVPVRVFRKALGIRKYTLSHE*VGGHPL Trigger: CAGAGGATGACCTCCGACTCATTCATGAGAGAGAGT...ATATTTTCTAATACCCAAGGCTTTTCTAAACACCCTTACTGGCACAGCTTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR GCA 90 bp | GTCCATAATGTTAAAAACAACCTATCCTTACTGTCTTTACTAGGTAATCCACAGTCTCTCTCAGCAGCCTaGCTCTGGGCCTTCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VHNVKNNLSLLSLLGNPQSLSAA*LWAFWK Trigger: CTTCCAGAAGGCCCAGAGGCAGGCTGCTGAGAGAGA...CTGTGGATTACCTAGTAAAGACAGTAAGGATAGGTTGTTTTTAACATTATGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR TCA 90 bp | AGGGAAGCTGTGCCAGTAAGGGTGTTTAGAAAAGCCTTGGGTATTAGAAAATATGGAGGTCATCCTCTGTaGTTTCTTCATCTTGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: REAVPVRVFRKALGIRKYGGHPL*FLHLGP Trigger: AGGTCCAAGATGAAGAAATCACAGAGGATGACCTCC...ATATTTTCTAATACCCAAGGCTTTTCTAAACACCCTTACTGGCACAGCTTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR GCA 90 bp | ATGGGAACATTACTTTGTGAAGACAGGACCCAAAGATACAGGCCTAAGAAGTGTAGTTGGTTAGTATACTaGTGCTTCTGCTGCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MGTLLCEDRTQRYRPKKCSWLVY*CFCCSC Trigger: ACAGCTGCAGCAGAAGCAGCAGTATACTAACCAACT...ACACTTCTTAGGCCTGTATCTTTGGGTCCTGTCTTCACAAAGTAATGTTCCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR GCA 90 bp | AGGGAAGCTGTGCCAGTAAGGGTGTTTAGAAAAGCCTTGGGTATTAGAAAATATAGTTGGTTAGTATACTaGTGCTTCTGCTGCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: REAVPVRVFRKALGIRKYSWLVY*CFCCSC Trigger: ACAGCTGCAGCAGAAGCAGCAGTATACTAACCAACT...ATATTTTCTAATACCCAAGGCTTTTCTAAACACCCTTACTGGCACAGCTTCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR CCA 90 bp | CAACGTGAGCAAAACCTAACAGTTGTTGAACTAAAAAGCAGGGAAGCTGTGCCAGTTTCTTTCGCAAGTTaGTTAGTATACTGCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QREQNLTVVELKSREAVPVSFAS*LVYCCF Trigger: GAAGCAGCAGTATACTAACCAACTTGCGAAAGAAAC...TGGCACAGCTTCCCTGCTTTTTAGTTCAACAACTGTTAGGTTTTGCTCACGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR CCA 90 bp | GTCCATAATGTTAAAAACAACCTATCCTTACTGTCTTTACTAGGTAATCCACAGTGCCTCTGGGCCTTCTaGAAGTTTGTCAGCGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: VHNVKNNLSLLSLLGNPQCLWAF*KFVSDV Trigger: CACATCGCTGACAAACTTCCAGAAGGCCCAGAGGCA...CTGTGGATTACCTAGTAAAGACAGTAAGGATAGGTTGTTTTTAACATTATGGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR GCA 90 bp | GTCCATAATGTTAAAAACAACCTATCCTTACTGTCTTTACTAGGTAATCCACAGTGGTTAGTATACTGCTaGTTCTGCTGCAGCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VHNVKNNLSLLSLLGNPQWLVYC*FCCSCC Trigger: GCAACAGCTGCAGCAGAAGCAGCAGTATACTAACCA...CTGTGGATTACCTAGTAAAGACAGTAAGGATAGGTTGTTTTTAACATTATGGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGCTGTGCCAGTAAGGGTGTTTAGAAAAGCCTTGGGTATTAGAAAATATCATTGTGTGATCTTTTaGATGTTAGAGGAGATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: REAVPVRVFRKALGIRKYHCVIF*MLEEMR Trigger: ACGCATCTCCTCTAACATCCAAAAGATCACACAATG...ATATTTTCTAATACCCAAGGCTTTTCTAAACACCCTTACTGGCACAGCTTCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGCTGTGCCAGTAAGGGTGTTTAGAAAAGCCTTGGGTATTAGAAAATATGTTTCTTTCGCAAGTTaGTTAGTATACTGCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: REAVPVRVFRKALGIRKYVSFAS*LVYCCF Trigger: GAAGCAGCAGTATACTAACCAACTTGCGAAAGAAAC...ATATTTTCTAATACCCAAGGCTTTTCTAAACACCCTTACTGGCACAGCTTCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS CCA 90 bp | CGCACTCGAGCAACGAACTCTTTCTCTCTCTCAGCAGCCTGCCTCTaGGCCTTCTGGAAGTTTGTCAGCGATGTGGTGAACTCTGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: RTRATNSFSLSAACL*AFWKFVSDVVNSAT Trigger: AGTGGCAGAGTTCACCACATCGCTGACAAACTTCCAGAAGGCCCAGAGGCAGGCTGCTGAGAGAGAGAAAGAGTTCGTTGCTCGAGTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS CCA 90 bp | GCAACGAACTCTTTCTCTCTCTCAGCAGCCTGCCTCTGGGCCTTCTaGAAGTTTGTCAGCGATGTGGTGAACTCTGCCACTAATCGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ATNSFSLSAACLWAF*KFVSDVVNSATNRS Trigger: AGACCGATTAGTGGCAGAGTTCACCACATCGCTGACAAACTTCCAGAAGGCCCAGAGGCAGGCTGCTGAGAGAGAGAAAGAGTTCGTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR CAA 90 bp | ACACTGTTTGACACACAAGCTACAGGGGCAGGTGGAAGAGAAGACCTTGTGGGAGATAGTCTGCCGCTCTaGACAGCTGCTGGTTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TLFDTQATGAGGREDLVGDSLPL*TAAGLP Trigger: AGGCAAACCAGCAGCTGTCAAGAGCGGCAGACTATC...TCCCACAAGGTCTTCTCTTCCACCTGCCCCTGTAGCTTGTGTGTCAAACAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
||
| CDS TCA 90 bp | CAGCAGCCTGCCTCTGGGCCTTCTGGAAGTTTGTCAGCGATGTGGTaGACTCTGCCACTAATCGGTCTTTCTGTATCTTTCTCTGACGCT | + |
|
Preference number: 5 (lower is better) Translates to: QQPASGPSGSLSAMW*TLPLIGLSVSFSDA Trigger: AGCGTCAGAGAAAGATACAGAAAGACCGATTAGTGGCAGAGTTCACCACATCGCTGACAAACTTCCAGAAGGCCCAGAGGCAGGCTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR CAA 90 bp | GGCAGCACACTGTTTGACACACAAGCTACAGGGGCAGGTGGAAGAGAAGACCTTCACTTGAGGCTGTGTTaGGCTTTCCCAGGATACAAG | + |
|
Preference number: 5 (lower is better) Translates to: GSTLFDTQATGAGGREDLHLRLC*AFPGYK Trigger: CTTGTATCCTGGGAAAGCCAAACACAGCCTCAAGTG...AAGGTCTTCTCTTCCACCTGCCCCTGTAGCTTGTGTGTCAAACAGTGTGCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
||
| CDS-3UTR CAA 90 bp | CACTGTTTGACACACAAGCTACAGGGGCAGGTGGAAGAGAAGACCTTGTGGGAGATCTTGGACCTGCACTaGAGGCTGTGTTTGGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HCLTHKLQGQVEEKTLWEILDLH*RLCLAF Trigger: GAAAGCCAAACACAGCCTCAAGTGCAGGTCCAAGAT...CTCCCACAAGGTCTTCTCTTCCACCTGCCCCTGTAGCTTGTGTGTCAAACAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
||
| CDS TCA 90 bp | AATGCAGAGAGTTTTCCTGGATTTGCGCTGATAGTCTGCCGCTCTTaGCAGCTGCTGGTTTGCCTGTTGAACGTGAACTTCCGCACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NAESFPGFALIVCRS*QLLVCLLNVNFRTF Trigger: GAAAGTGCGGAAGTTCACGTTCAACAGGCAAACCAGCAGCTGTCAAGAGCGGCAGACTATCAGCGCAAATCCAGGAAAACTCTCTGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR CAA 90 bp | GGCAGCACACTGTTTGACACACAAGCTACAGGGGCAGGTGGAAGAGAAGACCTTGCATTGTGTGATCTTTaGGATGTTAGAGGAGATGCG | + |
|
Preference number: 5 (lower is better) Translates to: GSTLFDTQATGAGGREDLALCDL*DVRGDA Trigger: CGCATCTCCTCTAACATCCAAAAGATCACACAATGC...AAGGTCTTCTCTTCCACCTGCCCCTGTAGCTTGTGTGTCAAACAGTGTGCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
||
| CDS-3UTR CAA 90 bp | GAAAGTGATCGCAAGAATCTGCCTGCATCGCTCAGACAGCATCATGCAGTCGTCTTGACAGCTGCTGGTTaGCCTGTTGAACGTGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: ESDRKNLPASLRQHHAVVLTAAG*PVEREL Trigger: AAGTTCACGTTCAACAGGCAAACCAGCAGCTGTCAA...GACGACTGCATGATGCTGTCTGAGCGATGCAGGCAGATTCTTGCGATCACTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR CAA 90 bp | CGCACGAGGGAAGGTATAATGGCCACAAAGCCAGACCATATGGTGAAAGTGGTTTTGACAGCTGCTGGTTaGCCTGTTGAACGTGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: RTREGIMATKPDHMVKVVLTAAG*PVEREL Trigger: AAGTTCACGTTCAACAGGCAAACCAGCAGCTGTCAA...AACCACTTTCACCATATGGTCTGGCTTTGTGGCCATTATACCTTCCCTCGTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR CAA 90 bp | ATGGGAACATTACTTTGTGAAGACAGGACCCAAAGATACAGGCCTAAGAAGTGTGATAGTCTGCCGCTCTaGACAGCTGCTGGTTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: MGTLLCEDRTQRYRPKKCDSLPL*TAAGLP Trigger: AGGCAAACCAGCAGCTGTCAAGAGCGGCAGACTATC...ACACTTCTTAGGCCTGTATCTTTGGGTCCTGTCTTCACAAAGTAATGTTCCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS TCA 90 bp | GTTAGTATACTGCTGCTTCTGCTGCAGCTGTTGCCTCAGTTCCGGTaGGTCTTGAGGTGTTCCAAGTTGATTCAGAGTCCTTTGTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: VSILLLLLQLLPQFR*VLRCSKLIQSPLYF Trigger: GAAATACAAAGGACTCTGAATCAACTTGGAACACCTCAAGACTCACCGGAACTGAGGCAACAGCTGCAGCAGAAGCAGCAGTATACTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR CAA 90 bp | ACGAGGGAAGGTATAATGGCCACAAAGCCAGACCATATGGTGAAAGTGGTTCAGGCATTGTGTGATCTTTaGGATGTTAGAGGAGATGCG | + |
|
Preference number: 5 (lower is better) Translates to: TREGIMATKPDHMVKVVQALCDL*DVRGDA Trigger: CGCATCTCCTCTAACATCCAAAAGATCACACAATGC...CTGAACCACTTTCACCATATGGTCTGGCTTTGTGGCCATTATACCTTCCCTCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR CAA 90 bp | ATAAGAGAAAGTGATCGCAAGAATCTGCCTGCATCGCTCAGACAGCATCATGCATGTGATTTCTTCATCTaGGACCTGCACTTGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IRESDRKNLPASLRQHHACDFFI*DLHLRL Trigger: CAGCCTCAAGTGCAGGTCCAAGATGAAGAAATCACA...TGCATGATGCTGTCTGAGCGATGCAGGCAGATTCTTGCGATCACTTTCTCTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
||
| CDS-3UTR CAA 90 bp | CCGATTTTTGAAAGAGCTCTGCTGTTGTGGGGCATCCACTATGAAGAGAACAGGTCCGCACTTTCTACATaGGCTTCTATGCTGTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: PIFERALLLWGIHYEENRSALST*ASMLSI Trigger: GATTGACAGCATAGAAGCCAATGTAGAAAGTGCGGA...CCTGTTCTCTTCATAGTGGATGCCCCACAACAGCAGAGCTCTTTCAAAAATCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
||
| CDS TCA 90 bp | TCCATAATATCAGCTTCCAGCTGCCTGATTGAAGACTCTCTCTCATaGATGAGTCGGAGGTCATCCTCTGTGATTTCTTCATCTTGGACC | + |
|
Preference number: 5 (lower is better) Translates to: SIISASSCLIEDSLS*MSRRSSSVISSSWT Trigger: GGTCCAAGATGAAGAAATCACAGAGGATGACCTCCGACTCATTCATGAGAGAGAGTCTTCAATCAGGCAGCTGGAAGCTGATATTATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS-3UTR CAA 90 bp | CCGATTTTTGAAAGAGCTCTGCTGTTGTGGGGCATCCACTATGAAGAGAACAGGTTGATTCAGAGTCCTTaGTATTTCCACGGAGCATTG | + |
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Preference number: 5 (lower is better) Translates to: PIFERALLLWGIHYEENRLIQSP*YFHGAL Trigger: CAATGCTCCGTGGAAATACAAAGGACTCTGAATCAA...CCTGTTCTCTTCATAGTGGATGCCCCACAACAGCAGAGCTCTTTCAAAAATCGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220041.2 |
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| CDS-3UTR CAA 90 bp | TGTTACACATGTTACACAGTTACAGAGGTGCAGGCAGAGTATACACGCCAATCATGTGATTTCTTCATCTaGGACCTGCACTTGAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: CYTCYTVTEVQAEYTRQSCDFFI*DLHLRL Trigger: CAGCCTCAAGTGCAGGTCCAAGATGAAGAAATCACA...TGATTGGCGTGTATACTCTGCCTGCACCTCTGTAACTGTGTAACATGTGTAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS-3UTR CAA 90 bp | ACGAGGGAAGGTATAATGGCCACAAAGCCAGACCATATGGTGAAAGTGGTTCAGGTCAATCATATCGCCTaGTTCATGAATCATCATCCC | + |
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Preference number: 5 (lower is better) Translates to: TREGIMATKPDHMVKVVQVNHIA*FMNHHP Trigger: GGGATGATGATTCATGAACAAGGCGATATGATTGAC...CTGAACCACTTTCACCATATGGTCTGGCTTTGTGGCCATTATACCTTCCCTCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS-3UTR CAA 90 bp | ATAAGAGAAAGTGATCGCAAGAATCTGCCTGCATCGCTCAGACAGCATCATGCATCCGCACTTTCTACATaGGCTTCTATGCTGTCAATC | + |
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Preference number: 5 (lower is better) Translates to: IRESDRKNLPASLRQHHASALST*ASMLSI Trigger: GATTGACAGCATAGAAGCCAATGTAGAAAGTGCGGA...TGCATGATGCTGTCTGAGCGATGCAGGCAGATTCTTGCGATCACTTTCTCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS CCA 90 bp | AGAGAGCCAAACTCTTTAATGTACTTATCGGTTTCTTTCGCAAGTTaGTTAGTATACTGCTGCTTCTGCTGCAGCTGTTGCCTCAGTTCC | + |
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Preference number: 5 (lower is better) Translates to: REPNSLMYLSVSFAS*LVYCCFCCSCCLSS Trigger: GGAACTGAGGCAACAGCTGCAGCAGAAGCAGCAGTATACTAACCAACTTGCGAAAGAAACCGATAAGTACATTAAAGAGTTTGGCTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS-3UTR CAA 90 bp | AGGGAAGCTGTGCCAGTAAGGGTGTTTAGAAAAGCCTTGGGTATTAGAAAATATCACTTGAGGCTGTGTTaGGCTTTCCCAGGATACAAG | + |
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Preference number: 5 (lower is better) Translates to: REAVPVRVFRKALGIRKYHLRLC*AFPGYK Trigger: CTTGTATCCTGGGAAAGCCAAACACAGCCTCAAGTG...ATATTTTCTAATACCCAAGGCTTTTCTAAACACCCTTACTGGCACAGCTTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS-3UTR CAA 90 bp | AAGATAATGCAATCATGTTACACATGTTACACAGTTACAGAGGTGCAGGCAGAGATCTTGGACCTGCACTaGAGGCTGTGTTTGGCTTTC | + |
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Preference number: 5 (lower is better) Translates to: KIMQSCYTCYTVTEVQAEILDLH*RLCLAF Trigger: GAAAGCCAAACACAGCCTCAAGTGCAGGTCCAAGAT...CTCTGCCTGCACCTCTGTAACTGTGTAACATGTGTAACATGATTGCATTATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS-3UTR CAA 90 bp | GGTTTCAGAGCCACATTAAACAGTGCCATCATTAGCAAACTGCTGTGTAAGAACTTGATTCAGAGTCCTTaGTATTTCCACGGAGCATTG | + |
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Preference number: 5 (lower is better) Translates to: GFRATLNSAIISKLLCKNLIQSP*YFHGAL Trigger: CAATGCTCCGTGGAAATACAAAGGACTCTGAATCAA...GTTCTTACACAGCAGTTTGCTAATGATGGCACTGTTTAATGTGGCTCTGAAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS-3UTR CAA 90 bp | GGTTTCAGAGCCACATTAAACAGTGCCATCATTAGCAAACTGCTGTGTAAGAACGGTTTCTTTCGCAAGTaGGTTAGTATACTGCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: GFRATLNSAIISKLLCKNGFFRK*VSILLL Trigger: AAGCAGCAGTATACTAACCAACTTGCGAAAGAAACC...GTTCTTACACAGCAGTTTGCTAATGATGGCACTGTTTAATGTGGCTCTGAAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS-3UTR CAA 90 bp | ATGGGAACATTACTTTGTGAAGACAGGACCCAAAGATACAGGCCTAAGAAGTGTTTGAGGTGTTCCAAGTaGATTCAGAGTCCTTTGTAT | + |
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Preference number: 5 (lower is better) Translates to: MGTLLCEDRTQRYRPKKCLRCSK*IQSPLY Trigger: ATACAAAGGACTCTGAATCAACTTGGAACACCTCAA...ACACTTCTTAGGCCTGTATCTTTGGGTCCTGTCTTCACAAAGTAATGTTCCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS-3UTR CAA 90 bp | ATGGGAACATTACTTTGTGAAGACAGGACCCAAAGATACAGGCCTAAGAAGTGTCAAGATTCTTTTCTTTaGAGCTGTCTTCAGGAAAAC | + |
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Preference number: 5 (lower is better) Translates to: MGTLLCEDRTQRYRPKKCQDSFL*SCLQEN Trigger: GTTTTCCTGAAGACAGCTCAAAAGAAAAGAATCTTG...ACACTTCTTAGGCCTGTATCTTTGGGTCCTGTCTTCACAAAGTAATGTTCCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS-3UTR CAA 90 bp | GGTTTCAGAGCCACATTAAACAGTGCCATCATTAGCAAACTGCTGTGTAAGAACCAAGATTCTTTTCTTTaGAGCTGTCTTCAGGAAAAC | + |
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Preference number: 5 (lower is better) Translates to: GFRATLNSAIISKLLCKNQDSFL*SCLQEN Trigger: GTTTTCCTGAAGACAGCTCAAAAGAAAAGAATCTTG...GTTCTTACACAGCAGTTTGCTAATGATGGCACTGTTTAATGTGGCTCTGAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS-3UTR CAA 90 bp | GTCCATAATGTTAAAAACAACCTATCCTTACTGTCTTTACTAGGTAATCCACAGGGTTTCTTTCGCAAGTaGGTTAGTATACTGCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: VHNVKNNLSLLSLLGNPQGFFRK*VSILLL Trigger: AAGCAGCAGTATACTAACCAACTTGCGAAAGAAACC...CTGTGGATTACCTAGTAAAGACAGTAAGGATAGGTTGTTTTTAACATTATGGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS-3UTR CAA 90 bp | GTCCATAATGTTAAAAACAACCTATCCTTACTGTCTTTACTAGGTAATCCACAGGTCAATCATATCGCCTaGTTCATGAATCATCATCCC | + |
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Preference number: 5 (lower is better) Translates to: VHNVKNNLSLLSLLGNPQVNHIA*FMNHHP Trigger: GGGATGATGATTCATGAACAAGGCGATATGATTGAC...CTGTGGATTACCTAGTAAAGACAGTAAGGATAGGTTGTTTTTAACATTATGGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS CCA 72 bp | TCTTTCTCTCTCTCAGCAGCCTGCCTCTGGGCCTTCTaGAAGTTTGTCAGCGATGTGGTGAACTCTGCCACT | + |
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Preference number: 6 (lower is better) Translates to: SFSLSAACLWAF*KFVSDVVNSAT Trigger: AGTGGCAGAGTTCACCACATCGCTGACAAACTTCCAGAAGGCCCAGAGGCAGGCTGCTGAGAGAGAGAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS CCA 72 bp | GCAACGAACTCTTTCTCTCTCTCAGCAGCCTGCCTCTaGGCCTTCTGGAAGTTTGTCAGCGATGTGGTGAAC | + |
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Preference number: 6 (lower is better) Translates to: ATNSFSLSAACL*AFWKFVSDVVN Trigger: GTTCACCACATCGCTGACAAACTTCCAGAAGGCCCAGAGGCAGGCTGCTGAGAGAGAGAAAGAGTTCGTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS CCA 72 bp | AGCTGTCTTCAGGAAAACCACCCGATACCCTGGAGCTaGCTCGCACTCGAGCAACGAACTCTTTCTCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SCLQENHPIPWS*LALEQRTLSLS Trigger: AGAGAGAGAAAGAGTTCGTTGCTCGAGTGCGAGCCAGCTCCAGGGTATCGGGTGGTTTTCCTGAAGACAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS TCA 72 bp | CTGCTGCTTCTGCTGCAGCTGTTGCCTCAGTTCCGGTaGGTCTTGAGGTGTTCCAAGTTGATTCAGAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: LLLLLQLLPQFR*VLRCSKLIQSP Trigger: AGGACTCTGAATCAACTTGGAACACCTCAAGACTCACCGGAACTGAGGCAACAGCTGCAGCAGAAGCAGCAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS CCA 72 bp | CTTTTGAGCTGTCTTCAGGAAAACCACCCGATACCCTaGAGCTGGCTCGCACTCGAGCAACGAACTCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: LLSCLQENHPIP*SWLALEQRTLS Trigger: AGAAAGAGTTCGTTGCTCGAGTGCGAGCCAGCTCCAGGGTATCGGGTGGTTTTCCTGAAGACAGCTCAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS CAA 72 bp | TGCGCTGATAGTCTGCCGCTCTTGACAGCTGCTGGTTaGCCTGTTGAACGTGAACTTCCGCACTTTCTACAT | + |
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Preference number: 6 (lower is better) Translates to: CADSLPLLTAAG*PVERELPHFLH Trigger: ATGTAGAAAGTGCGGAAGTTCACGTTCAACAGGCAAACCAGCAGCTGTCAAGAGCGGCAGACTATCAGCGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS CAA 90 bp | TCCTGGATTTGCGCTGATAGTCTGCCGCTCTTGACAGCTGCTGGTTaGCCTGTTGAACGTGAACTTCCGCACTTTCTACATTGGCTTCTA | + |
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Preference number: 6 (lower is better) Translates to: SWICADSLPLLTAAG*PVERELPHFLHWLL Trigger: TAGAAGCCAATGTAGAAAGTGCGGAAGTTCACGTTCAACAGGCAAACCAGCAGCTGTCAAGAGCGGCAGACTATCAGCGCAAATCCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS TCA 72 bp | GCCTCTGGGCCTTCTGGAAGTTTGTCAGCGATGTGGTaGACTCTGCCACTAATCGGTCTTTCTGTATCTTTC | + |
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Preference number: 6 (lower is better) Translates to: ASGPSGSLSAMW*TLPLIGLSVSF Trigger: GAAAGATACAGAAAGACCGATTAGTGGCAGAGTTCACCACATCGCTGACAAACTTCCAGAAGGCCCAGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS TCA 72 bp | AGTTTTCCTGGATTTGCGCTGATAGTCTGCCGCTCTTaGCAGCTGCTGGTTTGCCTGTTGAACGTGAACTTC | + |
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Preference number: 6 (lower is better) Translates to: SFPGFALIVCRS*QLLVCLLNVNF Trigger: GAAGTTCACGTTCAACAGGCAAACCAGCAGCTGTCAAGAGCGGCAGACTATCAGCGCAAATCCAGGAAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS CAA 72 bp | GAGTTTTCCTGGATTTGCGCTGATAGTCTGCCGCTCTaGACAGCTGCTGGTTTGCCTGTTGAACGTGAACTT | + |
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Preference number: 6 (lower is better) Translates to: EFSWICADSLPL*TAAGLPVEREL Trigger: AAGTTCACGTTCAACAGGCAAACCAGCAGCTGTCAAGAGCGGCAGACTATCAGCGCAAATCCAGGAAAACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS TCA 72 bp | TCAGCTTCCAGCTGCCTGATTGAAGACTCTCTCTCATaGATGAGTCGGAGGTCATCCTCTGTGATTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SASSCLIEDSLS*MSRRSSSVISS Trigger: TGAAGAAATCACAGAGGATGACCTCCGACTCATTCATGAGAGAGAGTCTTCAATCAGGCAGCTGGAAGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS GCA 72 bp | TACTTATCGGTTTCTTTCGCAAGTTGGTTAGTATACTaGTGCTTCTGCTGCAGCTGTTGCCTCAGTTCCGGT | + |
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Preference number: 6 (lower is better) Translates to: YLSVSFASWLVY*CFCCSCCLSSG Trigger: ACCGGAACTGAGGCAACAGCTGCAGCAGAAGCAGCAGTATACTAACCAACTTGCGAAAGAAACCGATAAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS CCA 72 bp | GTCCTTTGTATTTCCACGGAGCATTGTGTGATCTTTTaGATGTTAGAGGAGATGCGTTGTGCTAGCTGCGCA | + |
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Preference number: 6 (lower is better) Translates to: VLCISTEHCVIF*MLEEMRCASCA Trigger: TGCGCAGCTAGCACAACGCATCTCCTCTAACATCCAAAAGATCACACAATGCTCCGTGGAAATACAAAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS CAA 90 bp | CAGAGAGCCAAACTCTTTAATGTACTTATCGGTTTCTTTCGCAAGTaGGTTAGTATACTGCTGCTTCTGCTGCAGCTGTTGCCTCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: QRAKLFNVLIGFFRK*VSILLLLLQLLPQF Trigger: GAACTGAGGCAACAGCTGCAGCAGAAGCAGCAGTATACTAACCAACTTGCGAAAGAAACCGATAAGTACATTAAAGAGTTTGGCTCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS CCA 72 bp | AACTCTTTAATGTACTTATCGGTTTCTTTCGCAAGTTaGTTAGTATACTGCTGCTTCTGCTGCAGCTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: NSLMYLSVSFAS*LVYCCFCCSCC Trigger: GCAACAGCTGCAGCAGAAGCAGCAGTATACTAACCAACTTGCGAAAGAAACCGATAAGTACATTAAAGAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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| CDS CAA 72 bp | AAACTCTTTAATGTACTTATCGGTTTCTTTCGCAAGTaGGTTAGTATACTGCTGCTTCTGCTGCAGCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: KLFNVLIGFFRK*VSILLLLLQLL Trigger: CAACAGCTGCAGCAGAAGCAGCAGTATACTAACCAACTTGCGAAAGAAACCGATAAGTACATTAAAGAGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020174.7 ENSMUST00000220041.2 |
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