Pregenerated sensors for STX6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026470Ensembl transcript IDs: ENSMUST00000027743.13, ENSMUST00000192690.2, ENSMUST00000193059.6, ENSMUST00000195302.6
Found 256 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGCTCTGCAGTGACTGGCCTGGACTAAGCCGGCCGCCGCAGGACTaGGGTGCAGGCGGGAGCACCTGCGCGAGCAGCTCCTTTCTTGCT | + |
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Preference number: 1 (lower is better) Translates to: WLCSDWPGLSRPPQD*GAGGSTCASSSFLA Trigger: AGCAAGAAAGGAGCTGCTCGCGCAGGTGCTCCCGCCTGCACCTCAGTCCTGCGGCGGCCGGCTTAGTCCAGGCCAGTCACTGCAGAGCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR TCA 90 bp | CTGAGGTGCAGGCGGGAGCACCTGCGCGAGCAGCTCCTTTCTTGCTaGCACGCCACGCTCAGTCCCAGCCTGTGTCAGGTCTACAACACT | + |
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Preference number: 1 (lower is better) Translates to: LRCRREHLREQLLSC*HATLSPSLCQVYNT Trigger: AGTGTTGTAGACCTGACACAGGCTGGGACTGAGCGTGGCGTGTCAGCAAGAAAGGAGCTGCTCGCGCAGGTGCTCCCGCCTGCACCTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR GCA 90 bp | AGCAGTGGCTTGCTGTCCTCAGCAAGAGTGGGCAGCCGGGGCTTCTaGTATCCGGCCGGGCACATGGTCACCTCTTCCCTCTTCGAAGCT | + |
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Preference number: 1 (lower is better) Translates to: SSGLLSSARVGSRGF*YPAGHMVTSSLFEA Trigger: AGCTTCGAAGAGGGAAGAGGTGACCATGTGCCCGGCCGGATAGCAGAAGCCCCGGCTGCCCACTCTTGCTGAGGACAGCAAGCCACTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR TCA 90 bp | CGGCCGGGCACATGGTCACCTCTTCCCTCTTCGAAGCTTGCCCTTTaGGCGCTGGGAGAGAGGGCTGTCTCAAAGCTGGAGTCACAGAGG | + |
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Preference number: 1 (lower is better) Translates to: RPGTWSPLPSSKLAL*ALGERAVSKLESQR Trigger: CCTCTGTGACTCCAGCTTTGAGACAGCCCTCTCTCCCAGCGCTCAAAGGGCAAGCTTCGAAGAGGGAAGAGGTGACCATGTGCCCGGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR GCA 90 bp | GGTAGAGGTGTGTTTCTGGGCGAGGAATGTAAGTGGCGGAGTGCTTaGTTCTCCTCTCCCCTGGGTCCTCGTGCAGAAGTGCCTGAGGCG | + |
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Preference number: 1 (lower is better) Translates to: GRGVFLGEECKWRSA*FSSPLGPRAEVPEA Trigger: CGCCTCAGGCACTTCTGCACGAGGACCCAGGGGAGAGGAGAAGCAAGCACTCCGCCACTTACATTCCTCGCCCAGAAACACACCTCTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR CCA 90 bp | CACGTGTGCCCACAATCCAGCACACGTGGAGGAGAGGACAACTCGTaGGTGTGGTTCTCTTCCTCCACCAGGTGGGTTCTGGGGCTCACA | + |
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Preference number: 1 (lower is better) Translates to: HVCPQSSTRGGEDNS*VWFSSSTRWVLGLT Trigger: TGTGAGCCCCAGAACCCACCTGGTGGAGGAAGAGAACCACACCCACGAGTTGTCCTCTCCTCCACGTGTGCTGGATTGTGGGCACACGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR GCA 90 bp | GGGAGGGAGGCAATGCAGTCAGAGGGAGGGGGAGGAAGCGACAGCTaGTGTGCTCCACGTTCTATAACTTGCCTTCCAGATAGTCCATCT | + |
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Preference number: 1 (lower is better) Translates to: GREAMQSEGGGGSDS*CAPRSITCLPDSPS Trigger: AGATGGACTATCTGGAAGGCAAGTTATAGAACGTGGAGCACAGCAGCTGTCGCTTCCTCCCCCTCCCTCTGACTGCATTGCCTCCCTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR CCA 90 bp | CCCAGCTGTGAGGGTCCAGGGAGGATCCTGTGGCCGAGTCTTCAGTaGCCGAGTAAAGCCCCTTGTTGGAGAGTCTTCTCTTCAGGAATT | + |
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Preference number: 1 (lower is better) Translates to: PSCEGPGRILWPSLQ*PSKAPCWRVFSSGI Trigger: AATTCCTGAAGAGAAGACTCTCCAACAAGGGGCTTTACTCGGCCACTGAAGACTCGGCCACAGGATCCTCCCTGGACCCTCACAGCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR TCA 90 bp | GGAAACGTACATCCCCAGATGCCCTCGTTCTTGCCAGGCTTCTTCTaGAGGGAGAGTGGCAACCCATCTAAGCAGGGAAAAGGGTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: GNVHPQMPSFLPGFF*RESGNPSKQGKGSE Trigger: CTCAGACCCTTTTCCCTGCTTAGATGGGTTGCCACTCTCCCTTCAGAAGAAGCCTGGCAAGAACGAGGGCATCTGGGGATGTACGTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR GCA 90 bp | CATAAAAGCATCAGAGAAGAAGGTGTGTCCCACCTGGCTGAGCATTaGTGTGCTGTTCGGGGCTCTACGTCTGCAAGCTGCACCTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: HKSIREEGVSHLAEH*CAVRGSTSASCTSE Trigger: CTCAGAGGTGCAGCTTGCAGACGTAGAGCCCCGAACAGCACAGCAATGCTCAGCCAGGTGGGACACACCTTCTTCTCTGATGCTTTTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR CCA 90 bp | CTGGATTTCTCTTCACAGCCCTTACCCGCACGAGGTGAGAAGGCATaGAAGTTGCCAAGCTGTTGGCTACCAGACCCATCAGTCTGTTTA | + |
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Preference number: 1 (lower is better) Translates to: LDFSSQPLPARGEKA*KLPSCWLPDPSVCL Trigger: TAAACAGACTGATGGGTCTGGTAGCCAACAGCTTGGCAACTTCCATGCCTTCTCACCTCGTGCGGGTAAGGGCTGTGAAGAGAAATCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR TCA 90 bp | AATACTGAACAGAATCCCGTCACAGGGCTCGGCTGCAGCAGGACTTaGGGAGCAGAAGAAAGAAGTGGACTGCAAGGTGTAGAATGTCAC | + |
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Preference number: 1 (lower is better) Translates to: NTEQNPVTGLGCSRT*GAEERSGLQGVECH Trigger: GTGACATTCTACACCTTGCAGTCCACTTCTTTCTTCTGCTCCTCAAGTCCTGCTGCAGCCGAGCCCTGTGACGGGATTCTGTTCAGTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
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| 3UTR TCA 90 bp | TGTAGCCTGTGGGTTTTTCCAGCTACATTGGCCATGGAGTCCCAGTaGTCCTCCTGTCTCAATCAAACCCAGCTTTTCAGCATGTACTGG | + |
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Preference number: 1 (lower is better) Translates to: CSLWVFPATLAMESQ*SSCLNQTQLFSMYW Trigger: CCAGTACATGCTGAAAAGCTGGGTTTGATTGAGACAGGAGGATCACTGGGACTCCATGGCCAATGTAGCTGGAAAAACCCACAGGCTACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
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| 3UTR GCA 90 bp | AGGAAAACACAACATGCGTGCTCAGGCATACATGACAATTCCATTTaGCAGGACTGTGAAGTCCAGGGCAGGCATCGCATTGTGATGTCC | + |
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Preference number: 1 (lower is better) Translates to: RKTQHACSGIHDNSI*QDCEVQGRHRIVMS Trigger: GGACATCACAATGCGATGCCTGCCCTGGACTTCACAGTCCTGGCAAATGGAATTGTCATGTATGCCTGAGCACGCATGTTGTGTTTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR CCA 90 bp | GTTCTCTTCCCCATCTATGCTATTACTCACAGAGTAAGGGGCCTCTaGCTCAGAAGCAGCCTTTCTGTGTCAGGACAGCTTCTGCATAAG | + |
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Preference number: 1 (lower is better) Translates to: VLFPIYAITHRVRGL*LRSSLSVSGQLLHK Trigger: CTTATGCAGAAGCTGTCCTGACACAGAAAGGCTGCTTCTGAGCCAGAGGCCCCTTACTCTGTGAGTAATAGCATAGATGGGGAAGAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR CCA 90 bp | CACAGGGCTCGGCTGCAGCAGGACTTGAGGAGCAGAAGAAAGAAGTaGACTGCAAGGTGTAGAATGTCACCTTCATGGAGTTTATCTTAC | + |
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Preference number: 1 (lower is better) Translates to: HRARLQQDLRSRRKK*TARCRMSPSWSLSY Trigger: GTAAGATAAACTCCATGAAGGTGACATTCTACACCTTGCAGTCCACTTCTTTCTTCTGCTCCTCAAGTCCTGCTGCAGCCGAGCCCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
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| 3UTR CCA 90 bp | ATACACCTTAAAAAGATAAACAGAAGCCCATCGTTTCTACCAATTTaGGAGGGAGGCAATGCAGTCAGAGGGAGGGGGAGGAAGCGACAG | + |
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Preference number: 1 (lower is better) Translates to: IHLKKINRSPSFLPI*EGGNAVRGRGRKRQ Trigger: CTGTCGCTTCCTCCCCCTCCCTCTGACTGCATTGCCTCCCTCCCAAATTGGTAGAAACGATGGGCTTCTGTTTATCTTTTTAAGGTGTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR TCA 90 bp | ATGCATTTGGGACATTATAAGAAATCCCACATTCATGAGCACATCTaGGGTATGGGAACCGTCACCCGAAGCCTGAAGCGTAGTGTCAGC | + |
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Preference number: 1 (lower is better) Translates to: MHLGHYKKSHIHEHI*GMGTVTRSLKRSVS Trigger: GCTGACACTACGCTTCAGGCTTCGGGTGACGGTTCCCATACCTCAGATGTGCTCATGAATGTGGGATTTCTTATAATGTCCCAAATGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR GCA 90 bp | CCAGGGAGATACCATCAGTCCTTCAATAGGCTAGACCGACACAGGTaGTGCTGTTCTCAACTGCCCCAGTTTATTAAAGCCTTTCATCAT | + |
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Preference number: 1 (lower is better) Translates to: PGRYHQSFNRLDRHR*CCSQLPQFIKAFHH Trigger: ATGATGAAAGGCTTTAATAAACTGGGGCAGTTGAGAACAGCAGCACCTGTGTCGGTCTAGCCTATTGAAGGACTGATGGTATCTCCCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR CCA 90 bp | GCCTTCCAGATAGTCCATCTCTGTTTTGGTTACAAATTCACTTTGTaGCACAAGGTGAAGCCAAGCCACACCAAGTCCACAGAGGTGAAC | + |
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Preference number: 1 (lower is better) Translates to: AFQIVHLCFGYKFTL*HKVKPSHTKSTEVN Trigger: GTTCACCTCTGTGGACTTGGTGTGGCTTGGCTTCACCTTGTGCCACAAAGTGAATTTGTAACCAAAACAGAGATGGACTATCTGGAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR CCA 90 bp | TTCACTGAGTTTGTAGCCTGTGGGTTTTTCCAGCTACATTGGCCATaGAGTCCCAGTGATCCTCCTGTCTCAATCAAACCCAGCTTTTCA | + |
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Preference number: 1 (lower is better) Translates to: FTEFVACGFFQLHWP*SPSDPPVSIKPSFS Trigger: TGAAAAGCTGGGTTTGATTGAGACAGGAGGATCACTGGGACTCCATGGCCAATGTAGCTGGAAAAACCCACAGGCTACAAACTCAGTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
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| 3UTR CCA 90 bp | GCTGGCTCTGGCCCTGACGGCTATGTTAATACCAGGCTATGCATTTaGGACATTATAAGAAATCCCACATTCATGAGCACATCTGAGGTA | + |
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Preference number: 1 (lower is better) Translates to: AGSGPDGYVNTRLCI*DIIRNPTFMSTSEV Trigger: TACCTCAGATGTGCTCATGAATGTGGGATTTCTTATAATGTCCCAAATGCATAGCCTGGTATTAACATAGCCGTCAGGGCCAGAGCCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR CCA 90 bp | CCTGGTCTCACTCTGTGGGCAGAGAAATCACCCAAAGAAAACCCTTaGCTCCACTGCCTTTACTTACAGAAGGTAAAACACTTAACAGAG | + |
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Preference number: 1 (lower is better) Translates to: PGLTLWAEKSPKENP*LHCLYLQKVKHLTE Trigger: CTCTGTTAAGTGTTTTACCTTCTGTAAGTAAAGGCAGTGGAGCCAAGGGTTTTCTTTGGGTGATTTCTCTGCCCACAGAGTGAGACCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR CCA 90 bp | TATGGCCTGCCTCCAAGTGCAGATGACAGACACAGTGATCCTCCATaGATTCTTTTCCTGAGACCCAGCAGGTATCAATTGCAAATTGTT | + |
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Preference number: 1 (lower is better) Translates to: YGLPPSADDRHSDPP*ILFLRPSRYQLQIV Trigger: AACAATTTGCAATTGATACCTGCTGGGTCTCAGGAAAAGAATCCATGGAGGATCACTGTGTCTGTCATCTGCACTTGGAGGCAGGCCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
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| 3UTR CCA 90 bp | GAAGGTAAAACACTTAACAGAGACAGATTTCTGTTGGAATCAGACTaGATTTCTCTTCACAGCCCTTACCCGCACGAGGTGAGAAGGCAT | + |
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Preference number: 1 (lower is better) Translates to: EGKTLNRDRFLLESD*ISLHSPYPHEVRRH Trigger: ATGCCTTCTCACCTCGTGCGGGTAAGGGCTGTGAAGAGAAATCCAGTCTGATTCCAACAGAAATCTGTCTCTGTTAAGTGTTTTACCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR GCA 90 bp | ACACTTTTGCAAGTTTCTTCATCACGTTGTCCAGTCGAGACTGAGTaGTCTCCAACTCGTGAGAGAAATCATCTAGCATGTTCACTGCTA | + |
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Preference number: 1 (lower is better) Translates to: TLLQVSSSRCPVETE*SPTRERNHLACSLL Trigger: TAGCAGTGAACATGCTAGATGATTTCTCTCACGAGTTGGAGAGCACTCAGTCTCGACTGGACAACGTGATGAAGAAACTTGCAAAAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
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| 3UTR TCA 90 bp | AGAATAATGGGCAAGTTGCCAAGTTTCCCTGTTTCAGCTCTAGCGTaGATTCTGAAATTGAGGAAAACACAACATGCGTGCTCAGGCATA | + |
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Preference number: 1 (lower is better) Translates to: RIMGKLPSFPVSALA*ILKLRKTQHACSGI Trigger: TATGCCTGAGCACGCATGTTGTGTTTTCCTCAATTTCAGAATTCACGCTAGAGCTGAAACAGGGAAACTTGGCAACTTGCCCATTATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR GCA 90 bp | ACTCTGTGGGCAGAGAAATCACCCAAAGAAAACCCTTGGCTCCACTaGCTTTACTTACAGAAGGTAAAACACTTAACAGAGACAGATTTC | + |
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Preference number: 1 (lower is better) Translates to: TLWAEKSPKENPWLH*LYLQKVKHLTETDF Trigger: GAAATCTGTCTCTGTTAAGTGTTTTACCTTCTGTAAGTAAAGGCAGTGGAGCCAAGGGTTTTCTTTGGGTGATTTCTCTGCCCACAGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR TCA 90 bp | AAACACCCGGAAAAGCAGTTTAATCTCAACTCTTACCCAGCAAAATaGGACACTGCATTTCTGTCACGAAGTGTTTCTGAGCCTTCTGTT | + |
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Preference number: 1 (lower is better) Translates to: KHPEKQFNLNSYPAK*DTAFLSRSVSEPSV Trigger: AACAGAAGGCTCAGAAACACTTCGTGACAGAAATGCAGTGTCTCATTTTGCTGGGTAAGAGTTGAGATTAAACTGCTTTTCCGGGTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR TCA 90 bp | CAAATTGTTTCCTTCATATGTCAGTGTTTTAAAGTGTGTGTTGTGTaGATGCACACACGTGTGTGTGTGTGCATGTGTGTAGAGCATCGT | + |
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Preference number: 1 (lower is better) Translates to: QIVSFICQCFKVCVV*MHTRVCVCMCVEHR Trigger: ACGATGCTCTACACACATGCACACACACACACGTGTGTGCATTCACACAACACACACTTTAAAACACTGACATATGAAGGAAACAATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
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| 3UTR CAA 90 bp | AGGACTGAGGTGCAGGCGGGAGCACCTGCGCGAGCAGCTCCTTTCTaGCTGACACGCCACGCTCAGTCCCAGCCTGTGTCAGGTCTACAA | + |
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Preference number: 2 (lower is better) Translates to: RTEVQAGAPARAAPF*LTRHAQSQPVSGLQ Trigger: TTGTAGACCTGACACAGGCTGGGACTGAGCGTGGCGTGTCAGCAAGAAAGGAGCTGCTCGCGCAGGTGCTCCCGCCTGCACCTCAGTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR-3UTR TCA 90 bp | ACCAGGTGGGTTCTGGGGCTCACAATCGGGTCAACTGGTTTGGCAGCAGGCTTTGGCCCCTCCCAGCTGTaGGGGTCCAGGGAGGATCCT | + |
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Preference number: 2 (lower is better) Translates to: TRWVLGLTIGSTGLAAGFGPSQL*GSREDP Trigger: AGGATCCTCCCTGGACCCTCACAGCTGGGAGGGGCC...AAAGCCTGCTGCCAAACCAGTTGACCCGATTGTGAGCCCCAGAACCCACCTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR-3UTR GCA 90 bp | ACCAGGTGGGTTCTGGGGCTCACAATCGGGTCAACTGGTTTGGCAGCAGGCTTTGTCCTCGTGCAGAAGTaGCTGAGGCGGGCGGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: TRWVLGLTIGSTGLAAGFVLVQK*LRRAGH Trigger: GTGGCCCGCCCGCCTCAGGCACTTCTGCACGAGGAC...AAAGCCTGCTGCCAAACCAGTTGACCCGATTGTGAGCCCCAGAACCCACCTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR CAA 90 bp | CCGGCCGGGCACATGGTCACCTCTTCCCTCTTCGAAGCTTGCCCTTaGAGCGCTGGGAGAGAGGGCTGTCTCAAAGCTGGAGTCACAGAG | + |
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Preference number: 2 (lower is better) Translates to: PAGHMVTSSLFEACP*SAGREGCLKAGVTE Trigger: CTCTGTGACTCCAGCTTTGAGACAGCCCTCTCTCCCAGCGCTCAAAGGGCAAGCTTCGAAGAGGGAAGAGGTGACCATGTGCCCGGCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR CAA 90 bp | CAGCTCTCTGGGTCACTGCGGAAGAAAGGTCTGTCCTTGTTCTCTTaGCCCTGGCTCTGCAGTGACTGGCCTGGACTAAGCCGGCCGCCG | + |
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Preference number: 2 (lower is better) Translates to: QLSGSLRKKGLSLFS*PWLCSDWPGLSRPP Trigger: CGGCGGCCGGCTTAGTCCAGGCCAGTCACTGCAGAGCCAGGGCAAAGAGAACAAGGACAGACCTTTCTTCCGCAGTGACCCAGAGAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR-3UTR CCA 90 bp | GGTTCTCTTCCTCCACCAGGTGGGTTCTGGGGCTCACAATCGGGTCAACTGGTTATCCGGCCGGGCACATaGTCACCTCTTCCCTCTTCG | + |
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Preference number: 2 (lower is better) Translates to: GSLPPPGGFWGSQSGQLVIRPGT*SPLPSS Trigger: CGAAGAGGGAAGAGGTGACCATGTGCCCGGCCGGAT...AACCAGTTGACCCGATTGTGAGCCCCAGAACCCACCTGGTGGAGGAAGAGAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR-3UTR CCA 90 bp | GGACTCTGTCCTTCCTTCCTCAAGGAGCGAGGTCCAGTAAGGCAAAGCAGTGGCTGTCCTCAGCAAGAGTaGGCAGCCGGGGCTTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: GLCPSFLKERGPVRQSSGCPQQE*AAGASA Trigger: AGCAGAAGCCCCGGCTGCCCACTCTTGCTGAGGACA...GCCACTGCTTTGCCTTACTGGACCTCGCTCCTTGAGGAAGGAAGGACAGAGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR-3UTR TCA 90 bp | TGGGCTGGGGAGCACATCTGTAAGAGACACACACTCCTAGGCAGTGTGGGCCATTGTGTCCCACCTGGCTaGGCATTGCTGTGCTGTTCG | + |
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Preference number: 2 (lower is better) Translates to: WAGEHICKRHTLLGSVGHCVPPG*ALLCCS Trigger: CGAACAGCACAGCAATGCTCAGCCAGGTGGGACACA...ATGGCCCACACTGCCTAGGAGTGTGTGTCTCTTACAGATGTGCTCCCCAGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR-3UTR GCA 90 bp | GTGGGTGTGGTTCTCTTCCTCCACCAGGTGGGTTCTGGGGCTCACAATCGGGTCAGATGCCCTCGTTCTTaGCAGGCTTCTTCTGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: VGVVLFLHQVGSGAHNRVRCPRS*QASSEG Trigger: CCCTTCAGAAGAAGCCTGGCAAGAACGAGGGCATCT...GACCCGATTGTGAGCCCCAGAACCCACCTGGTGGAGGAAGAGAACCACACCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR-3UTR GCA 90 bp | TCTGTGGGCAGAGAAATCACCCAAAGAAAACCCTTGGCTCCACTGCCTTTACTTGCCGCAGGACTGAGGTaGAGGCGGGAGCACCTGCGC | + |
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Preference number: 2 (lower is better) Translates to: SVGREITQRKPLAPLPLLAAGLR*RREHLR Trigger: GCGCAGGTGCTCCCGCCTGCACCTCAGTCCTGCGGC...AAGTAAAGGCAGTGGAGCCAAGGGTTTTCTTTGGGTGATTTCTCTGCCCACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR-3UTR GCA 90 bp | GTGGGTGTGGTTCTCTTCCTCCACCAGGTGGGTTCTGGGGCTCACAATCGGGTCGGAGGAAGCGACAGCTaGTGTGCTCCACGTTCTATA | + |
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Preference number: 2 (lower is better) Translates to: VGVVLFLHQVGSGAHNRVGGSDS*CAPRSI Trigger: TATAGAACGTGGAGCACAGCAGCTGTCGCTTCCTCC...GACCCGATTGTGAGCCCCAGAACCCACCTGGTGGAGGAAGAGAACCACACCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR-3UTR CCA 90 bp | TGGATTTCTCTTCACAGCCCTTACCCGCACGAGGTGAGAAGGCATGGAAGTTGCGGCAGGCGCTCTCAGTaGACTGTCCTCCGTCCCATC | + |
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Preference number: 2 (lower is better) Translates to: WISLHSPYPHEVRRHGSCGRRSQ*TVLRPI Trigger: GATGGGACGGAGGACAGTCCACTGAGAGCGCCTGCC...GCAACTTCCATGCCTTCTCACCTCGTGCGGGTAAGGGCTGTGAAGAGAAATCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR-3UTR TCA 90 bp | ATGGAAGTTGCCAAGCTGTTGGCTACCAGACCCATCAGTCTGTTTAACTCTGGCGCCCTGGCTCTGCAGTaGCTGGCCTGGACTAAGCCG | + |
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Preference number: 2 (lower is better) Translates to: MEVAKLLATRPISLFNSGALALQ*LAWTKP Trigger: CGGCTTAGTCCAGGCCAGTCACTGCAGAGCCAGGGC...GCCAGAGTTAAACAGACTGATGGGTCTGGTAGCCAACAGCTTGGCAACTTCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR CAA 90 bp | GGATACCTTCAGCTCTCTGGGTCACTGCGGAAGAAAGGTCTGTCCTaGTTCTCTTTGCCCTGGCTCTGCAGTGACTGGCCTGGACTAAGC | + |
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Preference number: 2 (lower is better) Translates to: GYLQLSGSLRKKGLS*FSLPWLCSDWPGLS Trigger: GCTTAGTCCAGGCCAGTCACTGCAGAGCCAGGGCAAAGAGAACAAGGACAGACCTTTCTTCCGCAGTGACCCAGAGAGCTGAAGGTATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR-3UTR TCA 90 bp | TGGGCTGGGGAGCACATCTGTAAGAGACACACACTCCTAGGCAGTGTGGGCCATGGCTGTCAGTTCTTCTaGGGACTCTGTCCTTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: WAGEHICKRHTLLGSVGHGCQFF*GLCPSF Trigger: GAAGGAAGGACAGAGTCCTCAGAAGAACTGACAGCC...ATGGCCCACACTGCCTAGGAGTGTGTGTCTCTTACAGATGTGCTCCCCAGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR-3UTR TCA 90 bp | ATGGAAGTTGCCAAGCTGTTGGCTACCAGACCCATCAGTCTGTTTAACTCTGGCTGCAAGCTGCACCTCTaGGGAGACAGCCCTGGGACA | + |
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Preference number: 2 (lower is better) Translates to: MEVAKLLATRPISLFNSGCKLHL*GDSPGT Trigger: TGTCCCAGGGCTGTCTCCTCAGAGGTGCAGCTTGCA...GCCAGAGTTAAACAGACTGATGGGTCTGGTAGCCAACAGCTTGGCAACTTCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR-3UTR GCA 90 bp | CCTTTCTTGCTGACACGCCACGCTCAGTCCCAGCCTGTGTCAGGTCTACAACACTGGCATGCTAAGGAATaGACAGAGAGGCAGAGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: PFLLTRHAQSQPVSGLQHWHAKE*TERQSK Trigger: CTTGCTCTGCCTCTCTGTGCATTCCTTAGCATGCCA...GTGTTGTAGACCTGACACAGGCTGGGACTGAGCGTGGCGTGTCAGCAAGAAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR CCA 90 bp | GGCAGCAGGCTTTCCCATCCCCCATTGTTCACTCTTAAAGAGAAAGGCCATTTTGCAGGTCAGCAGCTCTaGCCAGGCCCAGGGAGATAC | + |
|
Preference number: 2 (lower is better) Translates to: GSRLSHPPLFTLKEKGHFAGQQL*PGPGRY Trigger: GTATCTCCCTGGGCCTGGCCAGAGCTGCTGACCTGC...AAAATGGCCTTTCTCTTTAAGAGTGAACAATGGGGGATGGGAAAGCCTGCTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR CCA 90 bp | ACCAGGTGGGTTCTGGGGCTCACAATCGGGTCAACTGGTTTGGCAGCAGGCTTTCCTGGTCTCACTCTGTaGGCAGAGAAATCACCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: TRWVLGLTIGSTGLAAGFPGLTL*AEKSPK Trigger: TTTGGGTGATTTCTCTGCCCACAGAGTGAGACCAGG...AAAGCCTGCTGCCAAACCAGTTGACCCGATTGTGAGCCCCAGAACCCACCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR GCA 90 bp | TGGTTACAAATTCACTTTGTGGCACAAGGTGAAGCCAAGCCACACCAAGTCCACGTCAGGCTGTCCAGGTaGTGCTCTTCCAGCACGGAG | + |
|
Preference number: 2 (lower is better) Translates to: WLQIHFVAQGEAKPHQVHVRLSR*CSSSTE Trigger: CTCCGTGCTGGAAGAGCAGCACCTGGACAGCCTGAC...GTGGACTTGGTGTGGCTTGGCTTCACCTTGTGCCACAAAGTGAATTTGTAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR CCA 90 bp | TCTGTGGGCAGAGAAATCACCCAAAGAAAACCCTTGGCTCCACTGCCTTTACTTGCTTCTCCTCTCCCCTaGGTCCTCGTGCAGAAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: SVGREITQRKPLAPLPLLASPLP*VLVQKC Trigger: GCACTTCTGCACGAGGACCCAGGGGAGAGGAGAAGC...AAGTAAAGGCAGTGGAGCCAAGGGTTTTCTTTGGGTGATTTCTCTGCCCACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR CCA 90 bp | TGGTCTCACTCTGTGGGCAGAGAAATCACCCAAAGAAAACCCTTGGCTCCACTGAAGGTGTGTCCCACCTaGCTGAGCATTGCTGTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: WSHSVGREITQRKPLAPLKVCPT*LSIAVL Trigger: CAGCACAGCAATGCTCAGCCAGGTGGGACACACCTT...CAGTGGAGCCAAGGGTTTTCTTTGGGTGATTTCTCTGCCCACAGAGTGAGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR CCA 90 bp | ACCAGGTGGGTTCTGGGGCTCACAATCGGGTCAACTGGTTTGGCAGCAGGCTTTATCTGTCAGGGAATTTaGACTCCCTCAGTAACTCCC | + |
|
Preference number: 2 (lower is better) Translates to: TRWVLGLTIGSTGLAAGFICQGI*TPSVTP Trigger: GGGAGTTACTGAGGGAGTCCAAATTCCCTGACAGAT...AAAGCCTGCTGCCAAACCAGTTGACCCGATTGTGAGCCCCAGAACCCACCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR CCA 90 bp | GTGGGTGTGGTTCTCTTCCTCCACCAGGTGGGTTCTGGGGCTCACAATCGGGTCTACAAATTCACTTTGTaGCACAAGGTGAAGCCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: VGVVLFLHQVGSGAHNRVYKFTL*HKVKPS Trigger: GCTTGGCTTCACCTTGTGCCACAAAGTGAATTTGTA...GACCCGATTGTGAGCCCCAGAACCCACCTGGTGGAGGAAGAGAACCACACCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR CCA 90 bp | ACCAGGTGGGTTCTGGGGCTCACAATCGGGTCAACTGGTTTGGCAGCAGGCTTTTCGTTTCTACCAATTTaGGAGGGAGGCAATGCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: TRWVLGLTIGSTGLAAGFSFLPI*EGGNAV Trigger: GACTGCATTGCCTCCCTCCCAAATTGGTAGAAACGA...AAAGCCTGCTGCCAAACCAGTTGACCCGATTGTGAGCCCCAGAACCCACCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR TCA 90 bp | GGCAGCAGGCTTTCCCATCCCCCATTGTTCACTCTTAAAGAGAAAGGCCATTTTCCAAGTCCACAGAGGTaGACTCAGTCCATCCCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: GSRLSHPPLFTLKEKGHFPSPQR*TQSIPP Trigger: GGGAGGGATGGACTGAGTTCACCTCTGTGGACTTGG...AAAATGGCCTTTCTCTTTAAGAGTGAACAATGGGGGATGGGAAAGCCTGCTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR GCA 90 bp | ACCAGGTGGGTTCTGGGGCTCACAATCGGGTCAACTGGTTTGGCAGCAGGCTTTAACCCTTGGCTCCACTaGCTTTACTTACAGAAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: TRWVLGLTIGSTGLAAGFNPWLH*LYLQKV Trigger: TACCTTCTGTAAGTAAAGGCAGTGGAGCCAAGGGTT...AAAGCCTGCTGCCAAACCAGTTGACCCGATTGTGAGCCCCAGAACCCACCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR GCA 90 bp | GTCCCAGTGATCCTCCTGTCTCAATCAAACCCAGCTTTTCAGCATGTACTGGAGTGGTCCTCAACGGTGTaGACTGGAACCAGGGGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: VPVILLSQSNPAFQHVLEWSSTV*TGTRGC Trigger: ACAACCCCTGGTTCCAGTGCACACCGTTGAGGACCA...CTCCAGTACATGCTGAAAAGCTGGGTTTGATTGAGACAGGAGGATCACTGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
||
| 3UTR-3UTR GCA 90 bp | GTCTCAATCAAACCCAGCTTTTCAGCATGTACTGGAGAATGTGAACTCAGTACTAGTGCTCCGGTCCACTaGGCTCTCTCCCCAGCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: VSIKPSFSACTGECELSTSAPVH*ALSPAP Trigger: TGGGGCTGGGGAGAGAGCGCAGTGGACCGGAGCACT...AGTACTGAGTTCACATTCTCCAGTACATGCTGAAAAGCTGGGTTTGATTGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCGGGTCAACTGGTTTGGCAGCAGGCTTTCCCATCCCCCATTGTTCACTCTTAATTCATGAGCACATCTaGGGTATGGGAACCGTCACC | + |
|
Preference number: 2 (lower is better) Translates to: IGSTGLAAGFPIPHCSLLIHEHI*GMGTVT Trigger: GGTGACGGTTCCCATACCTCAGATGTGCTCATGAAT...TAAGAGTGAACAATGGGGGATGGGAAAGCCTGCTGCCAAACCAGTTGACCCGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR TCA 90 bp | GTGGGTGTGGTTCTCTTCCTCCACCAGGTGGGTTCTGGGGCTCACAATCGGGTCATTAAAACAGAGGGCTaGGAACTAAAGGTATTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: VGVVLFLHQVGSGAHNRVIKTEG*ELKVFW Trigger: CCAAAATACCTTTAGTTCTCAGCCCTCTGTTTTAAT...GACCCGATTGTGAGCCCCAGAACCCACCTGGTGGAGGAAGAGAACCACACCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR GCA 90 bp | TCTGTGGGCAGAGAAATCACCCAAAGAAAACCCTTGGCTCCACTGCCTTTACTTTCCCTCTTCGAAGCTTaGCCTTTGAGCGCTGGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: SVGREITQRKPLAPLPLLSLFEA*PLSAGR Trigger: TCTCCCAGCGCTCAAAGGGCAAGCTTCGAAGAGGGA...AAGTAAAGGCAGTGGAGCCAAGGGTTTTCTTTGGGTGATTTCTCTGCCCACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR CCA 90 bp | GTCCCAGTGATCCTCCTGTCTCAATCAAACCCAGCTTTTCAGCATGTACTGGAGAAGAACAAGAGCGGATaGGGGAAGTGGGAAGGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: VPVILLSQSNPAFQHVLEKNKSG*GKWEGE Trigger: TTCCCCTTCCCACTTCCCCCATCCGCTCTTGTTCTT...CTCCAGTACATGCTGAAAAGCTGGGTTTGATTGAGACAGGAGGATCACTGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGATTTCTCTTCACAGCCCTTACCCGCACGAGGTGAGAAGGCATGGAAGTTGCAATACCTTCAATCAGTaGGGTTGCCATACGCACTCA | + |
|
Preference number: 2 (lower is better) Translates to: WISLHSPYPHEVRRHGSCNTFNQ*GCHTHS Trigger: TGAGTGCGTATGGCAACCTCACTGATTGAAGGTATT...GCAACTTCCATGCCTTCTCACCTCGTGCGGGTAAGGGCTGTGAAGAGAAATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR TCA 90 bp | TATACTTTACCCATATGCTTTCCCCTCCCCCAGTTCCTCCCAGACCGGTTTACCATGTACTGGAGAATGTaGACTCAGTACTCAAGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: YTLPICFPLPQFLPDRFTMYWRM*TQYSSL Trigger: CAGGCTTGAGTACTGAGTTCACATTCTCCAGTACAT...GGTAAACCGGTCTGGGAGGAACTGGGGGAGGGGAAAGCATATGGGTAAAGTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
||
| 3UTR-3UTR CCA 90 bp | AAATTAAAGCCAGAGTCACAAGTCTTCGTCCCTGACCATGCGGGAACCTTACTAAGAGTAAGGGGCCTCTaGCTCAGAAGCAGCCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: KLKPESQVFVPDHAGTLLRVRGL*LRSSLS Trigger: AGAAAGGCTGCTTCTGAGCCAGAGGCCCCTTACTCT...TAGTAAGGTTCCCGCATGGTCAGGGACGAAGACTTGTGACTCTGGCTTTAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR CAA 90 bp | CTTGCCTTCCAGATAGTCCATCTCTGTTTTGGTTACAAATTCACTTaGTGGCACAAGGTGAAGCCAAGCCACACCAAGTCCACAGAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: LAFQIVHLCFGYKFT*WHKVKPSHTKSTEV Trigger: CACCTCTGTGGACTTGGTGTGGCTTGGCTTCACCTTGTGCCACAAAGTGAATTTGTAACCAAAACAGAGATGGACTATCTGGAAGGCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR TCA 90 bp | GGCAGCAGGCTTTCCCATCCCCCATTGTTCACTCTTAAAGAGAAAGGCCATTTTGTGCTCAGGCATACATaGCAATTCCATTTGCCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: GSRLSHPPLFTLKEKGHFVLRHT*QFHLPG Trigger: TCCTGGCAAATGGAATTGTCATGTATGCCTGAGCAC...AAAATGGCCTTTCTCTTTAAGAGTGAACAATGGGGGATGGGAAAGCCTGCTGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR GCA 90 bp | TGGATTTCTCTTCACAGCCCTTACCCGCACGAGGTGAGAAGGCATGGAAGTTGCTTCACTACTTCCTGTTaGTTATCCCTGCCACAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: WISLHSPYPHEVRRHGSCFTTSC*LSLPQK Trigger: TTTTTGTGGCAGGGATAAGCAACAGGAAGTAGTGAA...GCAACTTCCATGCCTTCTCACCTCGTGCGGGTAAGGGCTGTGAAGAGAAATCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR GCA 90 bp | TTCTCTCTACTCTCGATGGACAAAATACACCTTAAAAAGATAAACAGAAGCCCAGCAGGCGGGAGCACCTaGGCGAGCAGCTCCTTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: FSLLSMDKIHLKKINRSPAGGST*ASSSFL Trigger: AAGAAAGGAGCTGCTCGCGCAGGTGCTCCCGCCTGC...TGGGCTTCTGTTTATCTTTTTAAGGTGTATTTTGTCCATCGAGAGTAGAGAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR GCA 90 bp | TTCTCTCTACTCTCGATGGACAAAATACACCTTAAAAAGATAAACAGAAGCCCACTCGAGCTCTGGGCCTaGAGGTGCCATGAATGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: FSLLSMDKIHLKKINRSPLELWA*RCHECP Trigger: GGGGCATTCATGGCACCTGCAGGCCCAGAGCTCGAG...TGGGCTTCTGTTTATCTTTTTAAGGTGTATTTTGTCCATCGAGAGTAGAGAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR CAA 90 bp | CCCTGGTCTCACTCTGTGGGCAGAGAAATCACCCAAAGAAAACCCTaGGCTCCACTGCCTTTACTTACAGAAGGTAAAACACTTAACAGA | + |
|
Preference number: 2 (lower is better) Translates to: PWSHSVGREITQRKP*APLPLLTEGKTLNR Trigger: TCTGTTAAGTGTTTTACCTTCTGTAAGTAAAGGCAGTGGAGCCAAGGGTTTTCTTTGGGTGATTTCTCTGCCCACAGAGTGAGACCAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR CCA 90 bp | TGGTTACAAATTCACTTTGTGGCACAAGGTGAAGCCAAGCCACACCAAGTCCACCTGTTGGAATCAGACTaGATTTCTCTTCACAGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: WLQIHFVAQGEAKPHQVHLLESD*ISLHSP Trigger: AGGGCTGTGAAGAGAAATCCAGTCTGATTCCAACAG...GTGGACTTGGTGTGGCTTGGCTTCACCTTGTGCCACAAAGTGAATTTGTAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR TCA 90 bp | TCTGTGGGCAGAGAAATCACCCAAAGAAAACCCTTGGCTCCACTGCCTTTACTTATTTTAATGCAAATCTaGGGCCTGCCCATGGTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: SVGREITQRKPLAPLPLLILMQI*GLPMVY Trigger: ATAGACCATGGGCAGGCCTCAGATTTGCATTAAAAT...AAGTAAAGGCAGTGGAGCCAAGGGTTTTCTTTGGGTGATTTCTCTGCCCACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR GCA 90 bp | TTCACTCTTAAAGAGAAAGGCCATTTTCAGGGTAAGATCTTTTTGAAGGTTGGCTCTACGTCTGCAAGCTaGACCTCTGAGGAGACAGCC | + |
|
Preference number: 2 (lower is better) Translates to: FTLKEKGHFQGKIFLKVGSTSAS*TSEETA Trigger: GGCTGTCTCCTCAGAGGTGCAGCTTGCAGACGTAGA...GCCAACCTTCAAAAAGATCTTACCCTGAAAATGGCCTTTCTCTTTAAGAGTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR GCA 90 bp | TGGTTACAAATTCACTTTGTGGCACAAGGTGAAGCCAAGCCACACCAAGTCCACTACCTCATCTCTGAGTaGCATCAGCATAAAAGCATC | + |
|
Preference number: 2 (lower is better) Translates to: WLQIHFVAQGEAKPHQVHYLISE*HQHKSI Trigger: GATGCTTTTATGCTGATGGCACTCAGAGATGAGGTA...GTGGACTTGGTGTGGCTTGGCTTCACCTTGTGCCACAAAGTGAATTTGTAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR GCA 90 bp | ACGTTCTCTCTACTCTCGATGGACAAAATACACCTTAAAAAGATAAACAGAAGCGGCAAAGCAGTGGCTTaGTGTCCTCAGCAAGAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: TFSLLSMDKIHLKKINRSGKAVA*CPQQEW Trigger: CCACTCTTGCTGAGGACAGCAAGCCACTGCTTTGCC...GCTTCTGTTTATCTTTTTAAGGTGTATTTTGTCCATCGAGAGTAGAGAGAACGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR CCA 90 bp | GGCAGCAGGCTTTCCCATCCCCCATTGTTCACTCTTAAAGAGAAAGGCCATTTTAATTTGAAAGTTAGCTaGGCAAGCACATCATTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: GSRLSHPPLFTLKEKGHFNLKVS*ASTSLG Trigger: TCCCAATGATGTGCTTGCCCAGCTAACTTTCAAATT...AAAATGGCCTTTCTCTTTAAGAGTGAACAATGGGGGATGGGAAAGCCTGCTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR CAA 90 bp | CCTTTACTTACAGAAGGTAAAACACTTAACAGAGACAGATTTCTGTaGGAATCAGACTGGATTTCTCTTCACAGCCCTTACCCGCACGAG | + |
|
Preference number: 2 (lower is better) Translates to: PLLTEGKTLNRDRFL*ESDWISLHSPYPHE Trigger: CTCGTGCGGGTAAGGGCTGTGAAGAGAAATCCAGTCTGATTCCAACAGAAATCTGTCTCTGTTAAGTGTTTTACCTTCTGTAAGTAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR CCA 90 bp | ACGTTCTCTCTACTCTCGATGGACAAAATACACCTTAAAAAGATAAACAGAAGCATACCTTCAGCTCTCTaGGTCACTGCGGAAGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: TFSLLSMDKIHLKKINRSIPSAL*VTAEER Trigger: CCTTTCTTCCGCAGTGACCCAGAGAGCTGAAGGTAT...GCTTCTGTTTATCTTTTTAAGGTGTATTTTGTCCATCGAGAGTAGAGAGAACGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR CCA 90 bp | TTCTCTCTACTCTCGATGGACAAAATACACCTTAAAAAGATAAACAGAAGCCCAAAGTTGCCAAGCTGTTaGCTACCAGACCCATCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: FSLLSMDKIHLKKINRSPKLPSC*LPDPSV Trigger: GACTGATGGGTCTGGTAGCCAACAGCTTGGCAACTT...TGGGCTTCTGTTTATCTTTTTAAGGTGTATTTTGTCCATCGAGAGTAGAGAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR TCA 90 bp | GATCCTCCATGGATTCTTTTCCTGAGACCCAGCAGGTATCAATTGCAAATTGTTTTTAAATGTGAATACTaGAGAACAAGAGCGGATGGG | + |
|
Preference number: 2 (lower is better) Translates to: DPPWILFLRPSRYQLQIVFKCEY*RTRADG Trigger: CCCATCCGCTCTTGTTCTTCAGTATTCACATTTAAA...AACAATTTGCAATTGATACCTGCTGGGTCTCAGGAAAAGAATCCATGGAGGATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
||
| 3UTR-3UTR CCA 90 bp | ACGTTCTCTCTACTCTCGATGGACAAAATACACCTTAAAAAGATAAACAGAAGCCCCAAAGAAAACCCTTaGCTCCACTGCCTTTACTTA | + |
|
Preference number: 2 (lower is better) Translates to: TFSLLSMDKIHLKKINRSPKENP*LHCLYL Trigger: TAAGTAAAGGCAGTGGAGCCAAGGGTTTTCTTTGGG...GCTTCTGTTTATCTTTTTAAGGTGTATTTTGTCCATCGAGAGTAGAGAGAACGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR TCA 90 bp | ACGTTCTCTCTACTCTCGATGGACAAAATACACCTTAAAAAGATAAACAGAAGCTCTTACCCAGCAAAATaGGACACTGCATTTCTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: TFSLLSMDKIHLKKINRSSYPAK*DTAFLS Trigger: TGACAGAAATGCAGTGTCTCATTTTGCTGGGTAAGA...GCTTCTGTTTATCTTTTTAAGGTGTATTTTGTCCATCGAGAGTAGAGAGAACGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR TCA 72 bp | AGTGACTGGCCTGGACTAAGCCGGCCGCCGCAGGACTaGGGTGCAGGCGGGAGCACCTGCGCGAGCAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SDWPGLSRPPQD*GAGGSTCASSS Trigger: GGAGCTGCTCGCGCAGGTGCTCCCGCCTGCACCTCAGTCCTGCGGCGGCCGGCTTAGTCCAGGCCAGTCACT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR GCA 72 bp | CTGGCCTGGACTAAGCCGGCCGCCGCAGGACTGAGGTaGAGGCGGGAGCACCTGCGCGAGCAGCTCCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LAWTKPAAAGLR*RREHLREQLLS Trigger: AGAAAGGAGCTGCTCGCGCAGGTGCTCCCGCCTGCACCTCAGTCCTGCGGCGGCCGGCTTAGTCCAGGCCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR TCA 72 bp | AGGCGGGAGCACCTGCGCGAGCAGCTCCTTTCTTGCTaGCACGCCACGCTCAGTCCCAGCCTGTGTCAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: RREHLREQLLSC*HATLSPSLCQV Trigger: GACCTGACACAGGCTGGGACTGAGCGTGGCGTGTCAGCAAGAAAGGAGCTGCTCGCGCAGGTGCTCCCGCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR CCA 72 bp | GCCCCTCCCAGCTGTGAGGGTCCAGGGAGGATCCTGTaGCCGAGTCTTCAGTGGCCGAGTAAAGCCCCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: APPSCEGPGRIL*PSLQWPSKAPC Trigger: ACAAGGGGCTTTACTCGGCCACTGAAGACTCGGCCACAGGATCCTCCCTGGACCCTCACAGCTGGGAGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR GCA 72 bp | CCCTCCCTCGAGCTCTGGGCCTGCAGGTGCCATGAATaGCCCCCTGGTCTCACTCTGTGGGCAGAGAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: PSLELWACRCHE*PPGLTLWAEKS Trigger: TGATTTCTCTGCCCACAGAGTGAGACCAGGGGGGCATTCATGGCACCTGCAGGCCCAGAGCTCGAGGGAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR GCA 72 bp | AGTACTCAAGCCTGCACGGTGAGTGCTCCGGTCCACTaGGCTCTCTCCCCAGCCCCATATCCACTAGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: STQACTVSAPVH*ALSPAPYPLVQ Trigger: CTGCACTAGTGGATATGGGGCTGGGGAGAGAGCGCAGTGGACCGGAGCACTCACCGTGCAGGCTTGAGTACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
||
| 3UTR GCA 72 bp | GCCGGGCACATGGTCACCTCTTCCCTCTTCGAAGCTTaGCCTTTGAGCGCTGGGAGAGAGGGCTGTCTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: AGHMVTSSLFEA*PLSAGREGCLK Trigger: TTTGAGACAGCCCTCTCTCCCAGCGCTCAAAGGGCAAGCTTCGAAGAGGGAAGAGGTGACCATGTGCCCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR CCA 72 bp | CTGCGGAAGAAAGGTCTGTCCTTGTTCTCTTTGCCCTaGCTCTGCAGTGACTGGCCTGGACTAAGCCGGCCG | + |
|
Preference number: 3 (lower is better) Translates to: LRKKGLSLFSLP*LCSDWPGLSRP Trigger: CGGCCGGCTTAGTCCAGGCCAGTCACTGCAGAGCCAGGGCAAAGAGAACAAGGACAGACCTTTCTTCCGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR CAA 90 bp | GTGGGTGTGGTTCTCTTCCTCCACCAGGTGGGTTCTGGGGCTCACAATCGGGTCGAAGTTGCCAAGCTGTaGGCTACCAGACCCATCAGT | + |
|
Preference number: 3 (lower is better) Translates to: VGVVLFLHQVGSGAHNRVEVAKL*ATRPIS Trigger: ACTGATGGGTCTGGTAGCCAACAGCTTGGCAACTTC...GACCCGATTGTGAGCCCCAGAACCCACCTGGTGGAGGAAGAGAACCACACCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR GCA 72 bp | GTGTTTCTGGGCGAGGAATGTAAGTGGCGGAGTGCTTaGTTCTCCTCTCCCCTGGGTCCTCGTGCAGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: VFLGEECKWRSA*FSSPLGPRAEV Trigger: CACTTCTGCACGAGGACCCAGGGGAGAGGAGAAGCAAGCACTCCGCCACTTACATTCCTCGCCCAGAAACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR CCA 72 bp | GTATTTTGGGATCCGTGCTCTGGCAGGCGCTCTCAGTaGACTGTCCTCCGTCCCATCCTCAGTCGATGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: VFWDPCSGRRSQ*TVLRPILSRWE Trigger: TTCCCATCGACTGAGGATGGGACGGAGGACAGTCCACTGAGAGCGCCTGCCAGAGCACGGATCCCAAAATAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR CCA 72 bp | CACCAGGTGGGTTCTGGGGCTCACAATCGGGTCAACTaGTTTGGCAGCAGGCTTTCCCATCCCCCATTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: HQVGSGAHNRVN*FGSRLSHPPLF Trigger: GAACAATGGGGGATGGGAAAGCCTGCTGCCAAACCAGTTGACCCGATTGTGAGCCCCAGAACCCACCTGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR CCA 72 bp | CCACAATCCAGCACACGTGGAGGAGAGGACAACTCGTaGGTGTGGTTCTCTTCCTCCACCAGGTGGGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PQSSTRGGEDNS*VWFSSSTRWVL Trigger: CAGAACCCACCTGGTGGAGGAAGAGAACCACACCCACGAGTTGTCCTCTCCTCCACGTGTGCTGGATTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR TCA 72 bp | ACATGGTCACCTCTTCCCTCTTCGAAGCTTGCCCTTTaGGCGCTGGGAGAGAGGGCTGTCTCAAAGCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: TWSPLPSSKLAL*ALGERAVSKLE Trigger: CTCCAGCTTTGAGACAGCCCTCTCTCCCAGCGCTCAAAGGGCAAGCTTCGAAGAGGGAAGAGGTGACCATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR GCA 72 bp | ATCAGAGAAGAAGGTGTGTCCCACCTGGCTGAGCATTaGTGTGCTGTTCGGGGCTCTACGTCTGCAAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: IREEGVSHLAEH*CAVRGSTSASC Trigger: GCAGCTTGCAGACGTAGAGCCCCGAACAGCACAGCAATGCTCAGCCAGGTGGGACACACCTTCTTCTCTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR CCA 72 bp | CACCTCTTCCCTCTTCGAAGCTTGCCCTTTGAGCGCTaGGAGAGAGGGCTGTCTCAAAGCTGGAGTCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: HLFPLRSLPFER*ERGLSQSWSHR Trigger: TCTGTGACTCCAGCTTTGAGACAGCCCTCTCTCCCAGCGCTCAAAGGGCAAGCTTCGAAGAGGGAAGAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR CCA 72 bp | GGTGGGTTCTGGGGCTCACAATCGGGTCAACTGGTTTaGCAGCAGGCTTTCCCATCCCCCATTGTTCACTCT | + |
|
Preference number: 3 (lower is better) Translates to: GGFWGSQSGQLV*QQAFPSPIVHS Trigger: AGAGTGAACAATGGGGGATGGGAAAGCCTGCTGCCAAACCAGTTGACCCGATTGTGAGCCCCAGAACCCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR CCA 72 bp | GACAACTCGTGGGTGTGGTTCTCTTCCTCCACCAGGTaGGTTCTGGGGCTCACAATCGGGTCAACTGGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: DNSWVWFSSSTR*VLGLTIGSTGL Trigger: CAAACCAGTTGACCCGATTGTGAGCCCCAGAACCCACCTGGTGGAGGAAGAGAACCACACCCACGAGTTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR GCA 72 bp | AGCCCTTACCCGCACGAGGTGAGAAGGCATGGAAGTTaGCAAGCTGTTGGCTACCAGACCCATCAGTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SPYPHEVRRHGS*QAVGYQTHQSV Trigger: AACAGACTGATGGGTCTGGTAGCCAACAGCTTGGCAACTTCCATGCCTTCTCACCTCGTGCGGGTAAGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR GCA 72 bp | GCAATGCAGTCAGAGGGAGGGGGAGGAAGCGACAGCTaGTGTGCTCCACGTTCTATAACTTGCCTTCCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: AMQSEGGGGSDS*CAPRSITCLPD Trigger: ATCTGGAAGGCAAGTTATAGAACGTGGAGCACAGCAGCTGTCGCTTCCTCCCCCTCCCTCTGACTGCATTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR TCA 72 bp | AGCACATCTGAGGTATGGGAACCGTCACCCGAAGCCTaGAGCGTAGTGTCAGCAGTTTCAGCCACTTCAACC | + |
|
Preference number: 3 (lower is better) Translates to: STSEVWEPSPEA*SVVSAVSATST Trigger: GGTTGAAGTGGCTGAAACTGCTGACACTACGCTTCAGGCTTCGGGTGACGGTTCCCATACCTCAGATGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR GCA 72 bp | GCAATGGAAACGTACATCCCCAGATGCCCTCGTTCTTaGCAGGCTTCTTCTGAAGGGAGAGTGGCAACCCAT | + |
|
Preference number: 3 (lower is better) Translates to: AMETYIPRCPRS*QASSEGRVATH Trigger: ATGGGTTGCCACTCTCCCTTCAGAAGAAGCCTGGCAAGAACGAGGGCATCTGGGGATGTACGTTTCCATTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR CCA 72 bp | AGCATAAAAGCATCAGAGAAGAAGGTGTGTCCCACCTaGCTGAGCATTGCTGTGCTGTTCGGGGCTCTACGT | + |
|
Preference number: 3 (lower is better) Translates to: SIKASEKKVCPT*LSIAVLFGALR Trigger: ACGTAGAGCCCCGAACAGCACAGCAATGCTCAGCCAGGTGGGACACACCTTCTTCTCTGATGCTTTTATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR CAA 90 bp | AAATTAAAGCCAGAGTCACAAGTCTTCGTCCCTGACCATGCGGGAACCTTACTATTCGAAGCTTGCCCTTaGAGCGCTGGGAGAGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: KLKPESQVFVPDHAGTLLFEACP*SAGREG Trigger: GCCCTCTCTCCCAGCGCTCAAAGGGCAAGCTTCGAA...TAGTAAGGTTCCCGCATGGTCAGGGACGAAGACTTGTGACTCTGGCTTTAATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR CAA 90 bp | GTCCCAGTGATCCTCCTGTCTCAATCAAACCCAGCTTTTCAGCATGTACTGGAGCGGCTGCAGCAGGACTaGAGGAGCAGAAGAAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: VPVILLSQSNPAFQHVLERLQQD*RSRRKK Trigger: CTTCTTTCTTCTGCTCCTCAAGTCCTGCTGCAGCCG...CTCCAGTACATGCTGAAAAGCTGGGTTTGATTGAGACAGGAGGATCACTGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTGTGGGCAGAGAAATCACCCAAAGAAAACCCTTGGCTCCACTGCCTTTACTTAGGCAAAGCAGTGGCTaGCTGTCCTCAGCAAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SVGREITQRKPLAPLPLLRQSSG*LSSARV Trigger: CACTCTTGCTGAGGACAGCAAGCCACTGCTTTGCCT...AAGTAAAGGCAGTGGAGCCAAGGGTTTTCTTTGGGTGATTTCTCTGCCCACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR GCA 72 bp | CAACATGCGTGCTCAGGCATACATGACAATTCCATTTaGCAGGACTGTGAAGTCCAGGGCAGGCATCGCATT | + |
|
Preference number: 3 (lower is better) Translates to: QHACSGIHDNSI*QDCEVQGRHRI Trigger: AATGCGATGCCTGCCCTGGACTTCACAGTCCTGGCAAATGGAATTGTCATGTATGCCTGAGCACGCATGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR CCA 72 bp | CCCATCTATGCTATTACTCACAGAGTAAGGGGCCTCTaGCTCAGAAGCAGCCTTTCTGTGTCAGGACAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PIYAITHRVRGL*LRSSLSVSGQL Trigger: AAGCTGTCCTGACACAGAAAGGCTGCTTCTGAGCCAGAGGCCCCTTACTCTGTGAGTAATAGCATAGATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR CAA 90 bp | GGTTCTCTTCCTCCACCAGGTGGGTTCTGGGGCTCACAATCGGGTCAACTGGTTCAGACAAGGCCCACATaGATTTTTAACAAAAGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GSLPPPGGFWGSQSGQLVQTRPT*IFNKRL Trigger: AAGCCTTTTGTTAAAAATCAATGTGGGCCTTGTCTG...AACCAGTTGACCCGATTGTGAGCCCCAGAACCCACCTGGTGGAGGAAGAGAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR TCA 72 bp | TGGGTTTTTCCAGCTACATTGGCCATGGAGTCCCAGTaGTCCTCCTGTCTCAATCAAACCCAGCTTTTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: WVFPATLAMESQ*SSCLNQTQLFS Trigger: GCTGAAAAGCTGGGTTTGATTGAGACAGGAGGATCACTGGGACTCCATGGCCAATGTAGCTGGAAAAACCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
||
| 3UTR CCA 72 bp | AAAAAGATAAACAGAAGCCCATCGTTTCTACCAATTTaGGAGGGAGGCAATGCAGTCAGAGGGAGGGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: KKINRSPSFLPI*EGGNAVRGRGR Trigger: CCTCCCCCTCCCTCTGACTGCATTGCCTCCCTCCCAAATTGGTAGAAACGATGGGCTTCTGTTTATCTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR CCA 72 bp | ACTGAGTTTGTAGCCTGTGGGTTTTTCCAGCTACATTaGCCATGGAGTCCCAGTGATCCTCCTGTCTCAATC | + |
|
Preference number: 3 (lower is better) Translates to: TEFVACGFFQLH*PWSPSDPPVSI Trigger: GATTGAGACAGGAGGATCACTGGGACTCCATGGCCAATGTAGCTGGAAAAACCCACAGGCTACAAACTCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
||
| 3UTR TCA 72 bp | GGACATTATAAGAAATCCCACATTCATGAGCACATCTaGGGTATGGGAACCGTCACCCGAAGCCTGAAGCGT | + |
|
Preference number: 3 (lower is better) Translates to: GHYKKSHIHEHI*GMGTVTRSLKR Trigger: ACGCTTCAGGCTTCGGGTGACGGTTCCCATACCTCAGATGTGCTCATGAATGTGGGATTTCTTATAATGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR GCA 72 bp | AGAAACATAACAGCAATGGAAACGTACATCCCCAGATaGCCTCGTTCTTGCCAGGCTTCTTCTGAAGGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: RNITAMETYIPR*PRSCQASSEGR Trigger: TCTCCCTTCAGAAGAAGCCTGGCAAGAACGAGGGCATCTGGGGATGTACGTTTCCATTGCTGTTATGTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR GCA 72 bp | TTAGAGAGCAGAGTACCAAGTTCTCTTCCCCATCTATaGTATTACTCACAGAGTAAGGGGCCTCTGGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LESRVPSSLPHL*YYSQSKGPLAQ Trigger: CTGAGCCAGAGGCCCCTTACTCTGTGAGTAATAGCATAGATGGGGAAGAGAACTTGGTACTCTGCTCTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR CCA 72 bp | CCTCCAAGTGCAGATGACAGACACAGTGATCCTCCATaGATTCTTTTCCTGAGACCCAGCAGGTATCAATTG | + |
|
Preference number: 3 (lower is better) Translates to: PPSADDRHSDPP*ILFLRPSRYQL Trigger: CAATTGATACCTGCTGGGTCTCAGGAAAAGAATCCATGGAGGATCACTGTGTCTGTCATCTGCACTTGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGTCTCACTCTGTGGGCAGAGAAATCACCCAAAGAAAACCCTTGGCTCCACTGAGAATAATGGGCAAGTaGCCAAGTTTCCCTGTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: WSHSVGREITQRKPLAPLRIMGK*PSFPVS Trigger: TGAAACAGGGAAACTTGGCAACTTGCCCATTATTCT...CAGTGGAGCCAAGGGTTTTCTTTGGGTGATTTCTCTGCCCACAGAGTGAGACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR CAA 90 bp | GATCCTCCATGGATTCTTTTCCTGAGACCCAGCAGGTATCAATTGCAAATTGTTAGCAGGCACGCCTCTTaGAGGAACGTTCCCTGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: DPPWILFLRPSRYQLQIVSRHAS*RNVPCR Trigger: TCTACAGGGAACGTTCCTCAAAGAGGCGTGCCTGCT...AACAATTTGCAATTGATACCTGCTGGGTCTCAGGAAAAGAATCCATGGAGGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
||
| 3UTR TCA 72 bp | GTTAGCCAGCATATATATCCCACCAGTTCTTTAATGTaGTGGCTCCAAAACCAAGAGCAGCAGGCAGAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: VSQHIYPTSSLM*WLQNQEQQAEW Trigger: CCACTCTGCCTGCTGCTCTTGGTTTTGGAGCCATCACATTAAAGAACTGGTGGGATATATATGCTGGCTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR TCA 72 bp | CCCAGCCCAAACAAAGACAAGATTAAAACAGAGGGCTaGGAACTAAAGGTATTTTGGGATCCGTGCTCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: PSPNKDKIKTEG*ELKVFWDPCSG Trigger: GCCAGAGCACGGATCCCAAAATACCTTTAGTTCTCAGCCCTCTGTTTTAATCTTGTCTTTGTTTGGGCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR GCA 72 bp | CATCAGTCCTTCAATAGGCTAGACCGACACAGGTGCTaGTGTTCTCAACTGCCCCAGTTTATTAAAGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: HQSFNRLDRHRC*CSQLPQFIKAF Trigger: AAAGGCTTTAATAAACTGGGGCAGTTGAGAACAGCAGCACCTGTGTCGGTCTAGCCTATTGAAGGACTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR GCA 72 bp | GGAAGCGACAGCTGCTGTGCTCCACGTTCTATAACTTaGCTTCCAGATAGTCCATCTCTGTTTTGGTTACAA | + |
|
Preference number: 3 (lower is better) Translates to: GSDSCCAPRSIT*LPDSPSLFWLQ Trigger: TTGTAACCAAAACAGAGATGGACTATCTGGAAGGCAAGTTATAGAACGTGGAGCACAGCAGCTGTCGCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR GCA 72 bp | GGCTCTGGCCCTGACGGCTATGTTAATACCAGGCTATaGATTTGGGACATTATAAGAAATCCCACATTCATG | + |
|
Preference number: 3 (lower is better) Translates to: GSGPDGYVNTRL*IWDIIRNPTFM Trigger: CATGAATGTGGGATTTCTTATAATGTCCCAAATGCATAGCCTGGTATTAACATAGCCGTCAGGGCCAGAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR GCA 72 bp | CAAGTTTCTTCATCACGTTGTCCAGTCGAGACTGAGTaGTCTCCAACTCGTGAGAGAAATCATCTAGCATGT | + |
|
Preference number: 3 (lower is better) Translates to: QVSSSRCPVETE*SPTRERNHLAC Trigger: ACATGCTAGATGATTTCTCTCACGAGTTGGAGAGCACTCAGTCTCGACTGGACAACGTGATGAAGAAACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
||
| 3UTR CCA 72 bp | ACTCTGTGGGCAGAGAAATCACCCAAAGAAAACCCTTaGCTCCACTGCCTTTACTTACAGAAGGTAAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: TLWAEKSPKENP*LHCLYLQKVKH Trigger: GTGTTTTACCTTCTGTAAGTAAAGGCAGTGGAGCCAAGGGTTTTCTTTGGGTGATTTCTCTGCCCACAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR CCA 72 bp | ATAGTCCATCTCTGTTTTGGTTACAAATTCACTTTGTaGCACAAGGTGAAGCCAAGCCACACCAAGTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: IVHLCFGYKFTL*HKVKPSHTKST Trigger: TGTGGACTTGGTGTGGCTTGGCTTCACCTTGTGCCACAAAGTGAATTTGTAACCAAAACAGAGATGGACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR CAA 90 bp | AAATTAAAGCCAGAGTCACAAGTCTTCGTCCCTGACCATGCGGGAACCTTACTATACCAGGCTATGCATTaGGGACATTATAAGAAATCC | + |
|
Preference number: 3 (lower is better) Translates to: KLKPESQVFVPDHAGTLLYQAMH*GHYKKS Trigger: GGATTTCTTATAATGTCCCAAATGCATAGCCTGGTA...TAGTAAGGTTCCCGCATGGTCAGGGACGAAGACTTGTGACTCTGGCTTTAATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR CAA 90 bp | TGGTTACAAATTCACTTTGTGGCACAAGGTGAAGCCAAGCCACACCAAGTCCACTGGGCAAGCACATCATaGGGAATAATAAAACAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: WLQIHFVAQGEAKPHQVHWASTS*GIIKQN Trigger: GTTTTGTTTTATTATTCCCAATGATGTGCTTGCCCA...GTGGACTTGGTGTGGCTTGGCTTCACCTTGTGCCACAAAGTGAATTTGTAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR-3UTR CAA 90 bp | TTCACTCTTAAAGAGAAAGGCCATTTTCAGGGTAAGATCTTTTTGAAGGTTGGCAAGAAAGGTCTGTCCTaGTTCTCTTTGCCCTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: FTLKEKGHFQGKIFLKVGKKGLS*FSLPWL Trigger: GAGCCAGGGCAAAGAGAACAAGGACAGACCTTTCTT...GCCAACCTTCAAAAAGATCTTACCCTGAAAATGGCCTTTCTCTTTAAGAGTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR TCA 72 bp | ATGACAGACACAGTGATCCTCCATGGATTCTTTTCCTaGGACCCAGCAGGTATCAATTGCAAATTGTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: MTDTVILHGFFS*DPAGINCKLFP Trigger: AGGAAACAATTTGCAATTGATACCTGCTGGGTCTCAGGAAAAGAATCCATGGAGGATCACTGTGTCTGTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
||
| 3UTR TCA 72 bp | GAAAAGCAGTTTAATCTCAACTCTTACCCAGCAAAATaGGACACTGCATTTCTGTCACGAAGTGTTTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: EKQFNLNSYPAK*DTAFLSRSVSE Trigger: CTCAGAAACACTTCGTGACAGAAATGCAGTGTCTCATTTTGCTGGGTAAGAGTTGAGATTAAACTGCTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| CDS-3UTR CCA 90 bp | GGCAAAGCAGTGGCTTGCTGTCCTCAGCAAGAGTGGGCAGCCGGGGCTTCTGCTGCTATGGCACACCACTaGCGCCGATCACTGGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: GKAVACCPQQEWAAGASAAMAHH*RRSLVM Trigger: CATGACCAGTGATCGGCGCCAGTGGTGTGCCATAGC...AGCAGAAGCCCCGGCTGCCCACTCTTGCTGAGGACAGCAAGCCACTGCTTTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR CAA 72 bp | GGCCGGGCACATGGTCACCTCTTCCCTCTTCGAAGCTaGCCCTTTGAGCGCTGGGAGAGAGGGCTGTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GRAHGHLFPLRS*PFERWERGLSQ Trigger: TTGAGACAGCCCTCTCTCCCAGCGCTCAAAGGGCAAGCTTCGAAGAGGGAAGAGGTGACCATGTGCCCGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR CAA 72 bp | CTCAAGGAGCGAGGTCCAGTAAGGCAAAGCAGTGGCTaGCTGTCCTCAGCAAGAGTGGGCAGCCGGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKERGPVRQSSG*LSSARVGSRGF Trigger: GAAGCCCCGGCTGCCCACTCTTGCTGAGGACAGCAAGCCACTGCTTTGCCTTACTGGACCTCGCTCCTTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| CDS-3UTR GCA 90 bp | TGTAAGTGGCGGAGTGCTTGCTTCTCCTCTCCCCTGGGTCCTCGTGCAGAAGTGCCAGCTCCCCTCCGATaGGCTGCGACATGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CKWRSACFSSPLGPRAEVPAPLR*AATCSS Trigger: TGAAGAACATGTCGCAGCGCATCGGAGGGGAGCTGG...CACTTCTGCACGAGGACCCAGGGGAGAGGAGAAGCAAGCACTCCGCCACTTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| CDS-3UTR GCA 90 bp | ACTGCTAGGCTTTCAGGGTCTCAGTCAGCGTCACTGCTGCTCAGGGCATCTCACTCCAGCTCTGGCTGCTaGTGTCTCCTAGGAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TARLSGSQSASLLLRASHSSSGC*CLLGVP Trigger: AGGCACTCCTAGGAGACAGCAGCAGCCAGAGCTGGA...GTGAGATGCCCTGAGCAGCAGTGACGCTGACTGAGACCCTGAAAGCCTAGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
||
| CDS-3UTR GCA 90 bp | TGGGCTGGGGAGCACATCTGTAAGAGACACACACTCCTAGGCAGTGTGGGCCATTCAGCACCCCGATGCTaGCAGAGACCAGCTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: WAGEHICKRHTLLGSVGHSAPRC*QRPAPT Trigger: AGTTGGAGCTGGTCTCTGGCAGCATCGGGGTGCTGA...ATGGCCCACACTGCCTAGGAGTGTGTGTCTCTTACAGATGTGCTCCCCAGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR CAA 72 bp | GGGTCACTGCGGAAGAAAGGTCTGTCCTTGTTCTCTTaGCCCTGGCTCTGCAGTGACTGGCCTGGACTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSLRKKGLSLFS*PWLCSDWPGLS Trigger: GCTTAGTCCAGGCCAGTCACTGCAGAGCCAGGGCAAAGAGAACAAGGACAGACCTTTCTTCCGCAGTGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| 3UTR CAA 72 bp | AGGTGGGTTCTGGGGCTCACAATCGGGTCAACTGGTTaGGCAGCAGGCTTTCCCATCCCCCATTGTTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: RWVLGLTIGSTG*AAGFPIPHCSL Trigger: GAGTGAACAATGGGGGATGGGAAAGCCTGCTGCCAAACCAGTTGACCCGATTGTGAGCCCCAGAACCCACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| CDS-3UTR TCA 90 bp | TGGATTTCTCTTCACAGCCCTTACCCGCACGAGGTGAGAAGGCATGGAAGTTGCCCTGCTGCTCCTCGATaGAGTGGGAGTTGGCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WISLHSPYPHEVRRHGSCPAAPR*SGSWLA Trigger: AGCTAGCCAACTCCCACTTCATCGAGGAGCAGCAGG...GCAACTTCCATGCCTTCTCACCTCGTGCGGGTAAGGGCTGTGAAGAGAAATCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| CDS-3UTR GCA 90 bp | CTTCATCACGTTGTCCAGTCGAGACTGAGTGCTCTCCAACTCGTGAGAGAAATCTGGGAGTTGGCTAGCTaGAGCTCCCGGTCAAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LHHVVQSRLSALQLVREIWELAS*SSRSRR Trigger: GCGCCTTGACCGGGAGCTGCAGCTAGCCAACTCCCA...GATTTCTCTCACGAGTTGGAGAGCACTCAGTCTCGACTGGACAACGTGATGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
||
| 3UTR CAA 72 bp | ACAGAATCCCGTCACAGGGCTCGGCTGCAGCAGGACTaGAGGAGCAGAAGAAAGAAGTGGACTGCAAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TESRHRARLQQD*RSRRKKWTARC Trigger: ACACCTTGCAGTCCACTTCTTTCTTCTGCTCCTCAAGTCCTGCTGCAGCCGAGCCCTGTGACGGGATTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
||
| CDS-3UTR GCA 90 bp | GGTTCTCTTCCTCCACCAGGTGGGTTCTGGGGCTCACAATCGGGTCAACTGGTTGATCCCACTCTATGCTaGGGAGATTGTTCCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSLPPPGGFWGSQSGQLVDPTLC*GDCSSA Trigger: AGCTGAGGAACAATCTCCGCAGCATAGAGTGGGATC...AACCAGTTGACCCGATTGTGAGCCCCAGAACCCACCTGGTGGAGGAAGAGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| CDS-3UTR GCA 90 bp | ACTGCTAGGCTTTCAGGGTCTCAGTCAGCGTCACTGCTGCTCAGGGCATCTCACCTTTCAGCCAGTGCCTaGACAGATGAAGCTGACATC | + |
|
Preference number: 4 (lower is better) Translates to: TARLSGSQSASLLLRASHLSASA*TDEADI Trigger: GATGTCAGCTTCATCTGTGCAGGCACTGGCTGAAAG...GTGAGATGCCCTGAGCAGCAGTGACGCTGACTGAGACCCTGAAAGCCTAGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
||
| CDS-3UTR GCA 90 bp | GGTTCTCTTCCTCCACCAGGTGGGTTCTGGGGCTCACAATCGGGTCAACTGGTTAATCAACTGCTGCTGTaGCTGCTGCTCCTCGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: GSLPPPGGFWGSQSGQLVNQLLL*LLLLDE Trigger: TTCATCGAGGAGCAGCAGGCACAGCAGCAGTTGATT...AACCAGTTGACCCGATTGTGAGCCCCAGAACCCACCTGGTGGAGGAAGAGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| CDS-3UTR GCA 90 bp | GCAGATGACAGACACAGTGATCCTCCATGGATTCTTTTCCTGAGACCCAGCAGGTCAGCACCCCGATGCTaGCAGAGACCAGCTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: ADDRHSDPPWILFLRPSRSAPRC*QRPAPT Trigger: AGTTGGAGCTGGTCTCTGGCAGCATCGGGGTGCTGA...CCTGCTGGGTCTCAGGAAAAGAATCCATGGAGGATCACTGTGTCTGTCATCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
||
| CDS-3UTR GCA 90 bp | GCAGATGACAGACACAGTGATCCTCCATGGATTCTTTTCCTGAGACCCAGCAGGTCTTCAGCACCCCGATaGTGCCAGAGACCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ADDRHSDPPWILFLRPSRSSAPR*CQRPAP Trigger: TGGAGCTGGTCTCTGGCAGCATCGGGGTGCTGAAGA...CCTGCTGGGTCTCAGGAAAAGAATCCATGGAGGATCACTGTGTCTGTCATCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
||
| CDS-3UTR GCA 90 bp | GCAGATGACAGACACAGTGATCCTCCATGGATTCTTTTCCTGAGACCCAGCAGGCCAGCTCCCCTCCGATaGGCTGCGACATGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ADDRHSDPPWILFLRPSRPAPLR*AATCSS Trigger: TGAAGAACATGTCGCAGCGCATCGGAGGGGAGCTGG...CCTGCTGGGTCTCAGGAAAAGAATCCATGGAGGATCACTGTGTCTGTCATCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
||
| CDS-3UTR CCA 90 bp | ATCGGGTCAACTGGTTTGGCAGCAGGCTTTCCCATCCCCCATTGTTCACTCTTACGAAGAGGATGGCTATaGCACACCACTGGCGCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: IGSTGLAAGFPIPHCSLLRRGWL*HTTGAD Trigger: ATCGGCGCCAGTGGTGTGCCATAGCCATCCTCTTCG...TAAGAGTGAACAATGGGGGATGGGAAAGCCTGCTGCCAAACCAGTTGACCCGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| CDS-3UTR GCA 90 bp | CTTTCATCATCTGCACCCCCAGCCCCAAGGGATTTCACTACTTCCTGTTGCTTATCCAGCTCTGGCTGCTaGTGTCTCCTAGGAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSSAPPAPRDFTTSCCLSSSGC*CLLGVP Trigger: AGGCACTCCTAGGAGACAGCAGCAGCCAGAGCTGGA...TAAGCAACAGGAAGTAGTGAAATCCCTTGGGGCTGGGGGTGCAGATGATGAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| CDS-3UTR GCA 90 bp | CGTTGTCCAGTCGAGACTGAGTGCTCTCCAACTCGTGAGAGAAATCATCTAGCAGCGCCCATAGCGATCTaGCACTCCAGCATTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RCPVETECSPTRERNHLAAPIAI*HSSIPA Trigger: AGCTGGAATGCTGGAGTGGCAGATCGCTATGGGCGC...TGCTAGATGATTTCTCTCACGAGTTGGAGAGCACTCAGTCTCGACTGGACAACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
||
| CDS-3UTR GCA 90 bp | CGTTGTCCAGTCGAGACTGAGTGCTCTCCAACTCGTGAGAGAAATCATCTAGCATCCCCTCCGATGCGCTaGGACATGTTCTTCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: RCPVETECSPTRERNHLASPPMR*DMFFST Trigger: GGTGCTGAAGAACATGTCGCAGCGCATCGGAGGGGA...TGCTAGATGATTTCTCTCACGAGTTGGAGAGCACTCAGTCTCGACTGGACAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
||
| CDS-3UTR GCA 90 bp | GTTTCTTCATCACGTTGTCCAGTCGAGACTGAGTGCTCTCCAACTCGTGAGAGACCAGCTCCCCTCCGATaGGCTGCGACATGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSSSRCPVETECSPTRERPAPLR*AATCSS Trigger: TGAAGAACATGTCGCAGCGCATCGGAGGGGAGCTGG...TCTCTCACGAGTTGGAGAGCACTCAGTCTCGACTGGACAACGTGATGAAGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
||
| CDS-3UTR TCA 90 bp | ACCAGGTGGGTTCTGGGGCTCACAATCGGGTCAACTGGTTTGGCAGCAGGCTTTCGATCACTGGTCATGTaGGACACTTTTGCAAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TRWVLGLTIGSTGLAAGFRSLVM*DTFASF Trigger: GAAACTTGCAAAAGTGTCTCACATGACCAGTGATCG...AAAGCCTGCTGCCAAACCAGTTGACCCGATTGTGAGCCCCAGAACCCACCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| CDS-3UTR GCA 90 bp | CGTTGTCCAGTCGAGACTGAGTGCTCTCCAACTCGTGAGAGAAATCATCTAGCATTCTTCCCTTGTTGCTaGAGAGGGGCCCTGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RCPVETECSPTRERNHLAFFPCC*RGALKE Trigger: CTCCTTCAGGGCCCCTCTGCAGCAACAAGGGAAGAA...TGCTAGATGATTTCTCTCACGAGTTGGAGAGCACTCAGTCTCGACTGGACAACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
||
| CDS-3UTR GCA 90 bp | ATCGGGTCAACTGGTTTGGCAGCAGGCTTTCCCATCCCCCATTGTTCACTCTTAGATTTCTTCCCTTGTTaGTGCAGAGGGGCCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IGSTGLAAGFPIPHCSLLDFFPC*CRGALK Trigger: CTTCAGGGCCCCTCTGCAGCAACAAGGGAAGAAATC...TAAGAGTGAACAATGGGGGATGGGAAAGCCTGCTGCCAAACCAGTTGACCCGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| CDS-3UTR GCA 90 bp | TGGTTACAAATTCACTTTGTGGCACAAGGTGAAGCCAAGCCACACCAAGTCCACGCGCCCATAGCGATCTaGCACTCCAGCATTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WLQIHFVAQGEAKPHQVHAPIAI*HSSIPA Trigger: AGCTGGAATGCTGGAGTGGCAGATCGCTATGGGCGC...GTGGACTTGGTGTGGCTTGGCTTCACCTTGTGCCACAAAGTGAATTTGTAACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| CDS-3UTR GCA 90 bp | ACCGACACAGGTGCTGCTGTTCTCAACTGCCCCAGTTTATTAAAGCCTTTCATCTGCTGCTGTGCCTGCTaGTCCTCGATGAAGTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TDTGAAVLNCPSLLKPFICCCAC*SSMKWE Trigger: CTCCCACTTCATCGAGGAGCAGCAGGCACAGCAGCA...GATGAAAGGCTTTAATAAACTGGGGCAGTTGAGAACAGCAGCACCTGTGTCGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| CDS-3UTR GCA 90 bp | GTCGAGACTGAGTGCTCTCCAACTCGTGAGAGAAATCATCTAGCATGTTCACTGTGCTGCTGTGCCTGCTaGTCCTCGATGAAGTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VETECSPTRERNHLACSLCCCAC*SSMKWE Trigger: CTCCCACTTCATCGAGGAGCAGCAGGCACAGCAGCA...CAGTGAACATGCTAGATGATTTCTCTCACGAGTTGGAGAGCACTCAGTCTCGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
||
| CDS-3UTR GCA 90 bp | ATGGAAGTTGCCAAGCTGTTGGCTACCAGACCCATCAGTCTGTTTAACTCTGGCAACTGCTGCTGTGCCTaGTGCTCCTCGATGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: MEVAKLLATRPISLFNSGNCCCA*CSSMKW Trigger: CCACTTCATCGAGGAGCAGCAGGCACAGCAGCAGTT...GCCAGAGTTAAACAGACTGATGGGTCTGGTAGCCAACAGCTTGGCAACTTCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| CDS-3UTR GCA 90 bp | GTTTCTTCATCACGTTGTCCAGTCGAGACTGAGTGCTCTCCAACTCGTGAGAGAAACTGCTGCTGTGCCTaGTGCTCCTCGATGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSSSRCPVETECSPTRERNCCCA*CSSMKW Trigger: CCACTTCATCGAGGAGCAGCAGGCACAGCAGCAGTT...TCTCTCACGAGTTGGAGAGCACTCAGTCTCGACTGGACAACGTGATGAAGAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
||
| CDS-3UTR GCA 90 bp | TCTTCATCACGTTGTCCAGTCGAGACTGAGTGCTCTCCAACTCGTGAGAGAAATTCAGCACCCCGATGCTaGCAGAGACCAGCTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: SSSRCPVETECSPTRERNSAPRC*QRPAPT Trigger: AGTTGGAGCTGGTCTCTGGCAGCATCGGGGTGCTGA...ATTTCTCTCACGAGTTGGAGAGCACTCAGTCTCGACTGGACAACGTGATGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
||
| CDS-3UTR GCA 90 bp | ACCGACACAGGTGCTGCTGTTCTCAACTGCCCCAGTTTATTAAAGCCTTTCATCTCTTCAGCACCCCGATaGTGCCAGAGACCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TDTGAAVLNCPSLLKPFISSAPR*CQRPAP Trigger: TGGAGCTGGTCTCTGGCAGCATCGGGGTGCTGAAGA...GATGAAAGGCTTTAATAAACTGGGGCAGTTGAGAACAGCAGCACCTGTGTCGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| CDS-3UTR GCA 90 bp | GTCGAGACTGAGTGCTCTCCAACTCGTGAGAGAAATCATCTAGCATGTTCACTGTCTTCAGCACCCCGATaGTGCCAGAGACCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VETECSPTRERNHLACSLSSAPR*CQRPAP Trigger: TGGAGCTGGTCTCTGGCAGCATCGGGGTGCTGAAGA...CAGTGAACATGCTAGATGATTTCTCTCACGAGTTGGAGAGCACTCAGTCTCGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
||
| CDS-3UTR GCA 90 bp | ACCGACACAGGTGCTGCTGTTCTCAACTGCCCCAGTTTATTAAAGCCTTTCATCTCCCCTCCGATGCGCTaGGACATGTTCTTCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TDTGAAVLNCPSLLKPFISPPMR*DMFFST Trigger: GGTGCTGAAGAACATGTCGCAGCGCATCGGAGGGGA...GATGAAAGGCTTTAATAAACTGGGGCAGTTGAGAACAGCAGCACCTGTGTCGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| CDS-3UTR GCA 90 bp | TGGTCTCACTCTGTGGGCAGAGAAATCACCCAAAGAAAACCCTTGGCTCCACTGCCAGTCGAGACTGAGTaGTCTCCAACTCGTGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WSHSVGREITQRKPLAPLPVETE*SPTRER Trigger: TCTCTCACGAGTTGGAGAGCACTCAGTCTCGACTGG...CAGTGGAGCCAAGGGTTTTCTTTGGGTGATTTCTCTGCCCACAGAGTGAGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| CDS-3UTR CCA 90 bp | AAATTAAAGCCAGAGTCACAAGTCTTCGTCCCTGACCATGCGGGAACCTTACTAGGACCGCGAAGAGGATaGCTATGGCACACCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLKPESQVFVPDHAGTLLGPRRG*LWHTTG Trigger: GCCAGTGGTGTGCCATAGCCATCCTCTTCGCGGTCC...TAGTAAGGTTCCCGCATGGTCAGGGACGAAGACTTGTGACTCTGGCTTTAATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| CDS-3UTR GCA 90 bp | ACCGACACAGGTGCTGCTGTTCTCAACTGCCCCAGTTTATTAAAGCCTTTCATCTTCTTCCCTTGTTGCTaGAGAGGGGCCCTGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TDTGAAVLNCPSLLKPFIFFPCC*RGALKE Trigger: CTCCTTCAGGGCCCCTCTGCAGCAACAAGGGAAGAA...GATGAAAGGCTTTAATAAACTGGGGCAGTTGAGAACAGCAGCACCTGTGTCGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| CDS-3UTR GCA 90 bp | TGGGCTGGGGAGCACATCTGTAAGAGACACACACTCCTAGGCAGTGTGGGCCATATGTCCCTGACAATTTaGCGAGTACTTGTGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WAGEHICKRHTLLGSVGHMSLTI*RVLVMK Trigger: CTTCATCACAAGTACTCGGCAAATTGTCAGGGACAT...ATGGCCCACACTGCCTAGGAGTGTGTGTCTCTTACAGATGTGCTCCCCAGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| CDS-3UTR TCA 90 bp | CTTTCATCATCTGCACCCCCAGCCCCAAGGGATTTCACTACTTCCTGTTGCTTAATCCTTGGGCAGTGTTaGCTGCTTTCTGTACCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSSSAPPAPRDFTTSCCLILGQC*LLSVPL Trigger: GAGAGGTACAGAAAGCAGTCAACACTGCCCAAGGAT...TAAGCAACAGGAAGTAGTGAAATCCCTTGGGGCTGGGGGTGCAGATGATGAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| CDS-3UTR GCA 90 bp | TGGTCTCACTCTGTGGGCAGAGAAATCACCCAAAGAAAACCCTTGGCTCCACTGTTGGGCAGTGTTGACTaGTTTCTGTACCTCTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: WSHSVGREITQRKPLAPLLGSVD*FLYLSL Trigger: AAGGGAGAGGTACAGAAAGCAGTCAACACTGCCCAA...CAGTGGAGCCAAGGGTTTTCTTTGGGTGATTTCTCTGCCCACAGAGTGAGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| CDS-3UTR GCA 90 bp | TCAAACCCAGCTTTTCAGCATGTACTGGAGAATGTGAACTCAGTACTCAAGCCTTGCTGCTGTGCCTGCTaGTCCTCGATGAAGTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SNPAFQHVLENVNSVLKPCCCAC*SSMKWE Trigger: CTCCCACTTCATCGAGGAGCAGCAGGCACAGCAGCA...AGGCTTGAGTACTGAGTTCACATTCTCCAGTACATGCTGAAAAGCTGGGTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
||
| CDS-3UTR GCA 90 bp | AAATTAAAGCCAGAGTCACAAGTCTTCGTCCCTGACCATGCGGGAACCTTACTATCCACAATCAACTGCTaGTGTGCCTGCTGCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KLKPESQVFVPDHAGTLLSTINC*CACCSS Trigger: CGAGGAGCAGCAGGCACAGCAGCAGTTGATTGTGGA...TAGTAAGGTTCCCGCATGGTCAGGGACGAAGACTTGTGACTCTGGCTTTAATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| CDS-3UTR GCA 90 bp | CTTTTGCAAGTTTCTTCATCACGTTGTCCAGTCGAGACTGAGTGCTCTCCAACTTCCACAATCAACTGCTaGTGTGCCTGCTGCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LLQVSSSRCPVETECSPTSTINC*CACCSS Trigger: CGAGGAGCAGCAGGCACAGCAGCAGTTGATTGTGGA...AGTTGGAGAGCACTCAGTCTCGACTGGACAACGTGATGAAGAAACTTGCAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
||
| CDS-3UTR CCA 90 bp | TCTTCATCACGTTGTCCAGTCGAGACTGAGTGCTCTCCAACTCGTGAGAGAAATTCCTCAGCTCGTTGGTaGTCCAGTCGATTTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSRCPVETECSPTRERNSSARW*SSRFLP Trigger: GGGAAGAAATCGACTGGACCACCAACGAGCTGAGGA...ATTTCTCTCACGAGTTGGAGAGCACTCAGTCTCGACTGGACAACGTGATGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
||
| CDS-3UTR TCA 90 bp | TGTCCAGTCGAGACTGAGTGCTCTCCAACTCGTGAGAGAAATCATCTAGCATGTATCCTTGGGCAGTGTTaGCTGCTTTCTGTACCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CPVETECSPTRERNHLACILGQC*LLSVPL Trigger: GAGAGGTACAGAAAGCAGTCAACACTGCCCAAGGAT...ACATGCTAGATGATTTCTCTCACGAGTTGGAGAGCACTCAGTCTCGACTGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
||
| CDS-3UTR TCA 90 bp | TCTGTGGGCAGAGAAATCACCCAAAGAAAACCCTTGGCTCCACTGCCTTTACTTAGCTCTGTCCATCTCTaGAACAATCCTTGGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVGREITQRKPLAPLPLLSSVHL*NNPWAV Trigger: CACTGCCCAAGGATTGTTTCAGAGATGGACAGAGCT...AAGTAAAGGCAGTGGAGCCAAGGGTTTTCTTTGGGTGATTTCTCTGCCCACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| CDS-3UTR TCA 90 bp | GCAGATGACAGACACAGTGATCCTCCATGGATTCTTTTCCTGAGACCCAGCAGGACGACACTGGTCATGTaGGACACTTTTGCAAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ADDRHSDPPWILFLRPSRTTLVM*DTFASF Trigger: GAAACTTGCAAAAGTGTCTCACATGACCAGTGTCGT...CCTGCTGGGTCTCAGGAAAAGAATCCATGGAGGATCACTGTGTCTGTCATCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
||
| CDS-3UTR GCA 90 bp | GTTTCTTCATCACGTTGTCCAGTCGAGACTGAGTGCTCTCCAACTCGTGAGAGATTGGGCAGTGTTGACTaGTTTCTGTACCTCTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSSSRCPVETECSPTRERLGSVD*FLYLSL Trigger: AAGGGAGAGGTACAGAAAGCAGTCAACACTGCCCAA...TCTCTCACGAGTTGGAGAGCACTCAGTCTCGACTGGACAACGTGATGAAGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
||
| CDS-3UTR GCA 90 bp | TCTTCATCACGTTGTCCAGTCGAGACTGAGTGCTCTCCAACTCGTGAGAGAAATGATCCCACTCTATGCTaGGGAGATTGTTCCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSRCPVETECSPTRERNDPTLC*GDCSSA Trigger: AGCTGAGGAACAATCTCCGCAGCATAGAGTGGGATC...ATTTCTCTCACGAGTTGGAGAGCACTCAGTCTCGACTGGACAACGTGATGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
||
| CDS-3UTR GCA 90 bp | TTCACTCTTAAAGAGAAAGGCCATTTTCAGGGTAAGATCTTTTTGAAGGTTGGCTGGGAGTTGGCTAGCTaGAGCTCCCGGTCAAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FTLKEKGHFQGKIFLKVGWELAS*SSRSRR Trigger: GCGCCTTGACCGGGAGCTGCAGCTAGCCAACTCCCA...GCCAACCTTCAAAAAGATCTTACCCTGAAAATGGCCTTTCTCTTTAAGAGTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| CDS-3UTR GCA 90 bp | GTCGAGACTGAGTGCTCTCCAACTCGTGAGAGAAATCATCTAGCATGTTCACTGAATCAACTGCTGCTGTaGCTGCTGCTCCTCGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: VETECSPTRERNHLACSLNQLLL*LLLLDE Trigger: TTCATCGAGGAGCAGCAGGCACAGCAGCAGTTGATT...CAGTGAACATGCTAGATGATTTCTCTCACGAGTTGGAGAGCACTCAGTCTCGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
||
| CDS-3UTR GCA 90 bp | TCAAACCCAGCTTTTCAGCATGTACTGGAGAATGTGAACTCAGTACTCAAGCCTTCCACAATCAACTGCTaGTGTGCCTGCTGCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SNPAFQHVLENVNSVLKPSTINC*CACCSS Trigger: CGAGGAGCAGCAGGCACAGCAGCAGTTGATTGTGGA...AGGCTTGAGTACTGAGTTCACATTCTCCAGTACATGCTGAAAAGCTGGGTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
||
| CDS-3UTR GCA 90 bp | GATCCTCCATGGATTCTTTTCCTGAGACCCAGCAGGTATCAATTGCAAATTGTTTCCCCTCCGATGCGCTaGGACATGTTCTTCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: DPPWILFLRPSRYQLQIVSPPMR*DMFFST Trigger: GGTGCTGAAGAACATGTCGCAGCGCATCGGAGGGGA...AACAATTTGCAATTGATACCTGCTGGGTCTCAGGAAAAGAATCCATGGAGGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
||
| CDS-3UTR TCA 90 bp | ACTCGTGAGAGAAATCATCTAGCATGTTCACTGCTAGGCTTTCAGGGTCTCAGTAGCTCTGTCCATCTCTaGAACAATCCTTGGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TRERNHLACSLLGFQGLSSSVHL*NNPWAV Trigger: CACTGCCCAAGGATTGTTTCAGAGATGGACAGAGCT...ACTGAGACCCTGAAAGCCTAGCAGTGAACATGCTAGATGATTTCTCTCACGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
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| CDS-3UTR GCA 90 bp | AAATTAAAGCCAGAGTCACAAGTCTTCGTCCCTGACCATGCGGGAACCTTACTACTTTCAGCCAGTGCCTaGACAGATGAAGCTGACATC | + |
|
Preference number: 4 (lower is better) Translates to: KLKPESQVFVPDHAGTLLLSASA*TDEADI Trigger: GATGTCAGCTTCATCTGTGCAGGCACTGGCTGAAAG...TAGTAAGGTTCCCGCATGGTCAGGGACGAAGACTTGTGACTCTGGCTTTAATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| CDS-3UTR GCA 90 bp | ACCGACACAGGTGCTGCTGTTCTCAACTGCCCCAGTTTATTAAAGCCTTTCATCTCCAACTGCTCATCCTaGTGTTCCACAATCAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: TDTGAAVLNCPSLLKPFISNCSS*CSTINC Trigger: GCAGTTGATTGTGGAACAGCAGGATGAGCAGTTGGA...GATGAAAGGCTTTAATAAACTGGGGCAGTTGAGAACAGCAGCACCTGTGTCGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| CDS-3UTR GCA 90 bp | TCTTCATCACGTTGTCCAGTCGAGACTGAGTGCTCTCCAACTCGTGAGAGAAATTCCAACTGCTCATCCTaGTGTTCCACAATCAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSRCPVETECSPTRERNSNCSS*CSTINC Trigger: GCAGTTGATTGTGGAACAGCAGGATGAGCAGTTGGA...ATTTCTCTCACGAGTTGGAGAGCACTCAGTCTCGACTGGACAACGTGATGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
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| CDS-3UTR CCA 90 bp | GGCAGCAGGCTTTCCCATCCCCCATTGTTCACTCTTAAAGAGAAAGGCCATTTTTGTTCCTCAGCTCGTTaGTGGTCCAGTCGATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GSRLSHPPLFTLKEKGHFCSSAR*WSSRFL Trigger: AAGAAATCGACTGGACCACCAACGAGCTGAGGAACA...AAAATGGCCTTTCTCTTTAAGAGTGAACAATGGGGGATGGGAAAGCCTGCTGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| CDS-3UTR CCA 90 bp | TCTTCATCACGTTGTCCAGTCGAGACTGAGTGCTCTCCAACTCGTGAGAGAAATTGTTCCTCAGCTCGTTaGTGGTCCAGTCGATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSSRCPVETECSPTRERNCSSAR*WSSRFL Trigger: AAGAAATCGACTGGACCACCAACGAGCTGAGGAACA...ATTTCTCTCACGAGTTGGAGAGCACTCAGTCTCGACTGGACAACGTGATGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
||
| CDS-3UTR TCA 90 bp | TCAAACCCAGCTTTTCAGCATGTACTGGAGAATGTGAACTCAGTACTCAAGCCTGTGCTCTCCAACTCGTaGGAGAAATCATCTAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: SNPAFQHVLENVNSVLKPVLSNS*EKSSSM Trigger: CATGCTAGATGATTTCTCTCACGAGTTGGAGAGCAC...AGGCTTGAGTACTGAGTTCACATTCTCCAGTACATGCTGAAAAGCTGGGTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
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| CDS-3UTR GCA 90 bp | ATGGAGTTTATCTTACACAAGTGTGTCTTAGCAGTTTTCACGTGTGTGATGTCAAACTGCTGCTGTGCCTaGTGCTCCTCGATGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: MEFILHKCVLAVFTCVMSNCCCA*CSSMKW Trigger: CCACTTCATCGAGGAGCAGCAGGCACAGCAGCAGTT...TGACATCACACACGTGAAAACTGCTAAGACACACTTGTGTAAGATAAACTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
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| CDS-3UTR GCA 90 bp | GATCCTCCATGGATTCTTTTCCTGAGACCCAGCAGGTATCAATTGCAAATTGTTAATCAACTGCTGCTGTaGCTGCTGCTCCTCGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: DPPWILFLRPSRYQLQIVNQLLL*LLLLDE Trigger: TTCATCGAGGAGCAGCAGGCACAGCAGCAGTTGATT...AACAATTTGCAATTGATACCTGCTGGGTCTCAGGAAAAGAATCCATGGAGGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
||
| CDS-3UTR GCA 90 bp | TCAAACCCAGCTTTTCAGCATGTACTGGAGAATGTGAACTCAGTACTCAAGCCTTCCAACTGCTCATCCTaGTGTTCCACAATCAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SNPAFQHVLENVNSVLKPSNCSS*CSTINC Trigger: GCAGTTGATTGTGGAACAGCAGGATGAGCAGTTGGA...AGGCTTGAGTACTGAGTTCACATTCTCCAGTACATGCTGAAAAGCTGGGTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
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| 3UTR CAA 72 bp | CACTCTGTGGGCAGAGAAATCACCCAAAGAAAACCCTaGGCTCCACTGCCTTTACTTACAGAAGGTAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: HSVGREITQRKP*APLPLLTEGKT Trigger: TGTTTTACCTTCTGTAAGTAAAGGCAGTGGAGCCAAGGGTTTTCTTTGGGTGATTTCTCTGCCCACAGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| 3UTR CAA 72 bp | CAGATAGTCCATCTCTGTTTTGGTTACAAATTCACTTaGTGGCACAAGGTGAAGCCAAGCCACACCAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QIVHLCFGYKFT*WHKVKPSHTKS Trigger: GGACTTGGTGTGGCTTGGCTTCACCTTGTGCCACAAAGTGAATTTGTAACCAAAACAGAGATGGACTATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| CDS-3UTR GCA 90 bp | CTTTTGCAAGTTTCTTCATCACGTTGTCCAGTCGAGACTGAGTGCTCTCCAACTATGTCCCTGACAATTTaGCGAGTACTTGTGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLQVSSSRCPVETECSPTMSLTI*RVLVMK Trigger: CTTCATCACAAGTACTCGGCAAATTGTCAGGGACAT...AGTTGGAGAGCACTCAGTCTCGACTGGACAACGTGATGAAGAAACTTGCAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
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| CDS-3UTR GCA 90 bp | GCAGTTTTCATGGAGTTTATCTTACACAAGTGTGTCTTAGCAGTTTTCACGTGTCCAGTCGAGACTGAGTaGTCTCCAACTCGTGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AVFMEFILHKCVLAVFTCPVETE*SPTRER Trigger: TCTCTCACGAGTTGGAGAGCACTCAGTCTCGACTGG...ACACGTGAAAACTGCTAAGACACACTTGTGTAAGATAAACTCCATGAAAACTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192690.2 |
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| CDS-3UTR CCA 90 bp | TTCACTCTTAAAGAGAAAGGCCATTTTCAGGGTAAGATCTTTTTGAAGGTTGGCTCCTCAGCTCGTTGGTaGTCCAGTCGATTTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FTLKEKGHFQGKIFLKVGSSARW*SSRFLP Trigger: GGGAAGAAATCGACTGGACCACCAACGAGCTGAGGA...GCCAACCTTCAAAAAGATCTTACCCTGAAAATGGCCTTTCTCTTTAAGAGTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| CDS-3UTR GCA 90 bp | TTGCAAGTTTCTTCATCACGTTGTCCAGTCGAGACTGAGTGCTCTCCAACTCGTGAATTTTCTAGGATTTaGTTCAACTATGCTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LQVSSSRCPVETECSPTREFSRI*FNYADG Trigger: ACCATCAGCATAGTTGAAGCAAATCCTAGAAAATTC...ACGAGTTGGAGAGCACTCAGTCTCGACTGGACAACGTGATGAAGAAACTTGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
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| CDS-3UTR TCA 90 bp | ACGTTCTCTCTACTCTCGATGGACAAAATACACCTTAAAAAGATAAACAGAAGCGTGCTCTCCAACTCGTaGGAGAAATCATCTAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: TFSLLSMDKIHLKKINRSVLSNS*EKSSSM Trigger: CATGCTAGATGATTTCTCTCACGAGTTGGAGAGCAC...GCTTCTGTTTATCTTTTTAAGGTGTATTTTGTCCATCGAGAGTAGAGAGAACGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| CDS-3UTR GCA 90 bp | CAGAAGGTAAAACACTTAACAGAGACAGATTTCTGTTGGAATCAGACTGGATTTGAATTTTCTAGGATTTaGTTCAACTATGCTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: QKVKHLTETDFCWNQTGFEFSRI*FNYADG Trigger: ACCATCAGCATAGTTGAAGCAAATCCTAGAAAATTC...AAATCCAGTCTGATTCCAACAGAAATCTGTCTCTGTTAAGTGTTTTACCTTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| CDS GCA 90 bp | TCATCTAGCATGACGGCCTGTTCCTCCAGCTCCCCTCCGATGCGCTaGGACATGTTCTTCAGCACCCCGATGCTGCCAGAGACCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSSMTACSSSSPPMR*DMFFSTPMLPETSS Trigger: GGAGCTGGTCTCTGGCAGCATCGGGGTGCTGAAGAACATGTCGCAGCGCATCGGAGGGGAGCTGGAGGAACAGGCCGTCATGCTAGATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027743.13 ENSMUST00000192690.2 ENSMUST00000195302.6 |
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| CDS GCA 90 bp | CCAGCTCCCCTCCGATGCGCTGCGACATGTTCTTCAGCACCCCGATaGTGCCAGAGACCAGCTCCAACTGCTCATCCTGCTGTTCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: PAPLRCAATCSSAPR*CQRPAPTAHPAVPQ Trigger: TTGTGGAACAGCAGGATGAGCAGTTGGAGCTGGTCTCTGGCAGCATCGGGGTGCTGAAGAACATGTCGCAGCGCATCGGAGGGGAGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027743.13 ENSMUST00000192690.2 ENSMUST00000193059.6 ENSMUST00000195302.6 |
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| CDS GCA 90 bp | GCTCCCCTCCGATGCGCTGCGACATGTTCTTCAGCACCCCGATGCTaGCAGAGACCAGCTCCAACTGCTCATCCTGCTGTTCCACAATCA | + |
|
Preference number: 5 (lower is better) Translates to: APLRCAATCSSAPRC*QRPAPTAHPAVPQS Trigger: TGATTGTGGAACAGCAGGATGAGCAGTTGGAGCTGGTCTCTGGCAGCATCGGGGTGCTGAAGAACATGTCGCAGCGCATCGGAGGGGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027743.13 ENSMUST00000192690.2 ENSMUST00000193059.6 ENSMUST00000195302.6 |
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| CDS CCA 90 bp | GCACTAGGAAGAGGATCAGCACGACCACCAGGACCGCGAAGAGGATaGCTATGGCACACCACTGGCGCCGATCACTGGTCATGTGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: ALGRGSARPPGPRRG*LWHTTGADHWSCET Trigger: TGTCTCACATGACCAGTGATCGGCGCCAGTGGTGTGCCATAGCCATCCTCTTCGCGGTCCTGGTGGTCGTGCTGATCCTCTTCCTAGTGC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| CDS GCA 90 bp | GGCGCCCATAGCGATCTGCCACTCCAGCATTCCAGCTCTGGCTGCTaGTGTCTCCTAGGAGTGCCTGTCTGTTTTTCCTTTCAGCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GAHSDLPLQHSSSGC*CLLGVPVCFSFQPV Trigger: CACTGGCTGAAAGGAAAAACAGACAGGCACTCCTAGGAGACAGCAGCAGCCAGAGCTGGAATGCTGGAGTGGCAGATCGCTATGGGCGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027743.13 ENSMUST00000193059.6 ENSMUST00000195302.6 |
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| CDS CCA 90 bp | GGAAGAGGATCAGCACGACCACCAGGACCGCGAAGAGGATGGCTATaGCACACCACTGGCGCCGATCACTGGTCATGTGAGACACTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GRGSARPPGPRRGWL*HTTGADHWSCETLL Trigger: CAAAAGTGTCTCACATGACCAGTGATCGGCGCCAGTGGTGTGCCATAGCCATCCTCTTCGCGGTCCTGGTGGTCGTGCTGATCCTCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| CDS CCA 90 bp | CCTCCAGATCCCACTCTATGCTGCGGAGATTGTTCCTCAGCTCGTTaGTGGTCCAGTCGATTTCTTCCCTTGTTGCTGCAGAGGGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PPDPTLCCGDCSSAR*WSSRFLPLLLQRGP Trigger: AGGGCCCCTCTGCAGCAACAAGGGAAGAAATCGACTGGACCACCAACGAGCTGAGGAACAATCTCCGCAGCATAGAGTGGGATCTGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027743.13 ENSMUST00000193059.6 ENSMUST00000195302.6 |
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| CDS CCA 90 bp | CCAGATCCCACTCTATGCTGCGGAGATTGTTCCTCAGCTCGTTGGTaGTCCAGTCGATTTCTTCCCTTGTTGCTGCAGAGGGGCCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PDPTLCCGDCSSARW*SSRFLPLLLQRGPE Trigger: TTCAGGGCCCCTCTGCAGCAACAAGGGAAGAAATCGACTGGACCACCAACGAGCTGAGGAACAATCTCCGCAGCATAGAGTGGGATCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027743.13 ENSMUST00000193059.6 ENSMUST00000195302.6 |
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| CDS-3UTR CAA 90 bp | CCTTTCTTGCTGACACGCCACGCTCAGTCCCAGCCTGTGTCAGGTCTACAACACTCTATGCTGCGGAGATaGTTCCTCAGCTCGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PFLLTRHAQSQPVSGLQHSMLRR*FLSSLV Trigger: CACCAACGAGCTGAGGAACAATCTCCGCAGCATAGA...GTGTTGTAGACCTGACACAGGCTGGGACTGAGCGTGGCGTGTCAGCAAGAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| CDS GCA 90 bp | GTTCCTCAGCTCGTTGGTGGTCCAGTCGATTTCTTCCCTTGTTGCTaGAGAGGGGCCCTGAAGGAGCTCTGTCCATCTCTGAAACAATCC | + |
|
Preference number: 5 (lower is better) Translates to: VPQLVGGPVDFFPCC*RGALKELCPSLKQS Trigger: GGATTGTTTCAGAGATGGACAGAGCTCCTTCAGGGCCCCTCTGCAGCAACAAGGGAAGAAATCGACTGGACCACCAACGAGCTGAGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027743.13 ENSMUST00000193059.6 ENSMUST00000195302.6 |
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| CDS-3UTR CAA 90 bp | TGGATTTCTCTTCACAGCCCTTACCCGCACGAGGTGAGAAGGCATGGAAGTTGCCGATTTCTTCCCTTGTaGCTGCAGAGGGGCCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: WISLHSPYPHEVRRHGSCRFLPL*LQRGPE Trigger: TTCAGGGCCCCTCTGCAGCAACAAGGGAAGAAATCG...GCAACTTCCATGCCTTCTCACCTCGTGCGGGTAAGGGCTGTGAAGAGAAATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| CDS-3UTR CAA 90 bp | GGCAGCAGGCTTTCCCATCCCCCATTGTTCACTCTTAAAGAGAAAGGCCATTTTTCGATGAAGTGGGAGTaGGCTAGCTGCAGCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GSRLSHPPLFTLKEKGHFSMKWE*ASCSSR Trigger: CCGGGAGCTGCAGCTAGCCAACTCCCACTTCATCGA...AAAATGGCCTTTCTCTTTAAGAGTGAACAATGGGGGATGGGAAAGCCTGCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| CDS-3UTR CAA 90 bp | GTCGAGACTGAGTGCTCTCCAACTCGTGAGAGAAATCATCTAGCATGTTCACTGTCGATGAAGTGGGAGTaGGCTAGCTGCAGCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: VETECSPTRERNHLACSLSMKWE*ASCSSR Trigger: CCGGGAGCTGCAGCTAGCCAACTCCCACTTCATCGA...CAGTGAACATGCTAGATGATTTCTCTCACGAGTTGGAGAGCACTCAGTCTCGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
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| CDS GCA 90 bp | ATTGTTCCTCAGCTCGTTGGTGGTCCAGTCGATTTCTTCCCTTGTTaGTGCAGAGGGGCCCTGAAGGAGCTCTGTCCATCTCTGAAACAA | + |
|
Preference number: 5 (lower is better) Translates to: IVPQLVGGPVDFFPC*CRGALKELCPSLKQ Trigger: TTGTTTCAGAGATGGACAGAGCTCCTTCAGGGCCCCTCTGCAGCAACAAGGGAAGAAATCGACTGGACCACCAACGAGCTGAGGAACAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027743.13 ENSMUST00000193059.6 ENSMUST00000195302.6 |
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| CDS-3UTR CAA 90 bp | CGTTGTCCAGTCGAGACTGAGTGCTCTCCAACTCGTGAGAGAAATCATCTAGCAAGTCGATTTCTTCCCTaGTTGCTGCAGAGGGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RCPVETECSPTRERNHLASRFLP*LLQRGP Trigger: AGGGCCCCTCTGCAGCAACAAGGGAAGAAATCGACT...TGCTAGATGATTTCTCTCACGAGTTGGAGAGCACTCAGTCTCGACTGGACAACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
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| CDS GCA 90 bp | TATGGCACACCACTGGCGCCGATCACTGGTCATGTGAGACACTTTTaGAAGTTTCTTCATCACGTTGTCCAGTCGAGACTGAGTGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: YGTPLAPITGHVRHF*KFLHHVVQSRLSAL Trigger: GAGAGCACTCAGTCTCGACTGGACAACGTGATGAAGAAACTTGCAAAAGTGTCTCACATGACCAGTGATCGGCGCCAGTGGTGTGCCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| CDS-3UTR CAA 90 bp | GTTTCTTCATCACGTTGTCCAGTCGAGACTGAGTGCTCTCCAACTCGTGAGAGATCTATGCTGCGGAGATaGTTCCTCAGCTCGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VSSSRCPVETECSPTRERSMLRR*FLSSLV Trigger: CACCAACGAGCTGAGGAACAATCTCCGCAGCATAGA...TCTCTCACGAGTTGGAGAGCACTCAGTCTCGACTGGACAACGTGATGAAGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
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| CDS-3UTR CAA 90 bp | AAATTAAAGCCAGAGTCACAAGTCTTCGTCCCTGACCATGCGGGAACCTTACTAAGTCGATTTCTTCCCTaGTTGCTGCAGAGGGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: KLKPESQVFVPDHAGTLLSRFLP*LLQRGP Trigger: AGGGCCCCTCTGCAGCAACAAGGGAAGAAATCGACT...TAGTAAGGTTCCCGCATGGTCAGGGACGAAGACTTGTGACTCTGGCTTTAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| CDS-3UTR CAA 90 bp | CGTTGTCCAGTCGAGACTGAGTGCTCTCCAACTCGTGAGAGAAATCATCTAGCATTGTTCCTCAGCTCGTaGGTGGTCCAGTCGATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RCPVETECSPTRERNHLALFLSS*VVQSIS Trigger: AGAAATCGACTGGACCACCAACGAGCTGAGGAACAA...TGCTAGATGATTTCTCTCACGAGTTGGAGAGCACTCAGTCTCGACTGGACAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
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| CDS-3UTR CAA 90 bp | TCTGTGGGCAGAGAAATCACCCAAAGAAAACCCTTGGCTCCACTGCCTTTACTTTTGTTCCTCAGCTCGTaGGTGGTCCAGTCGATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SVGREITQRKPLAPLPLLLFLSS*VVQSIS Trigger: AGAAATCGACTGGACCACCAACGAGCTGAGGAACAA...AAGTAAAGGCAGTGGAGCCAAGGGTTTTCTTTGGGTGATTTCTCTGCCCACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| CDS-3UTR CAA 90 bp | ACCGACACAGGTGCTGCTGTTCTCAACTGCCCCAGTTTATTAAAGCCTTTCATCAATCCTTGGGCAGTGTaGACTGCTTTCTGTACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TDTGAAVLNCPSLLKPFINPWAV*TAFCTS Trigger: AGAGGTACAGAAAGCAGTCAACACTGCCCAAGGATT...GATGAAAGGCTTTAATAAACTGGGGCAGTTGAGAACAGCAGCACCTGTGTCGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| CDS-3UTR CAA 90 bp | GTCGAGACTGAGTGCTCTCCAACTCGTGAGAGAAATCATCTAGCATGTTCACTGAATCCTTGGGCAGTGTaGACTGCTTTCTGTACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VETECSPTRERNHLACSLNPWAV*TAFCTS Trigger: AGAGGTACAGAAAGCAGTCAACACTGCCCAAGGATT...CAGTGAACATGCTAGATGATTTCTCTCACGAGTTGGAGAGCACTCAGTCTCGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
||
| CDS-3UTR CAA 90 bp | GTTTCTTCATCACGTTGTCCAGTCGAGACTGAGTGCTCTCCAACTCGTGAGAGATCTCTGAAACAATCCTaGGGCAGTGTTGACTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VSSSRCPVETECSPTRERSLKQS*GSVDCF Trigger: AAAGCAGTCAACACTGCCCAAGGATTGTTTCAGAGA...TCTCTCACGAGTTGGAGAGCACTCAGTCTCGACTGGACAACGTGATGAAGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
||
| CDS-3UTR CAA 90 bp | AAATTAAAGCCAGAGTCACAAGTCTTCGTCCCTGACCATGCGGGAACCTTACTATCTCTGAAACAATCCTaGGGCAGTGTTGACTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: KLKPESQVFVPDHAGTLLSLKQS*GSVDCF Trigger: AAAGCAGTCAACACTGCCCAAGGATTGTTTCAGAGA...TAGTAAGGTTCCCGCATGGTCAGGGACGAAGACTTGTGACTCTGGCTTTAATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
||
| CDS GCA 90 bp | TTTGACTTGACGTACATCATTTCCACTGGTCATGTGAGACACTTTTaGAAGTTTCTTCATCACGTTGTCCAGTCGAGACTGAGTGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FDLTYIISTGHVRHF*KFLHHVVQSRLSAL Trigger: GAGAGCACTCAGTCTCGACTGGACAACGTGATGAAGAAACTTGCAAAAGTGTCTCACATGACCAGTGGAAATGATGTACGTCAAGTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195302.6 |
||
| CDS GCA 90 bp | TTGCCGAGTACTTGTGATGAAGGCTTTTCTTATGCTCAATTCAGTTaGATCCAAGTTGAATTTTCTAGGATTTGCTTCAACTATGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LPSTCDEGFSYAQFS*IQVEFSRICFNYAD Trigger: ATCAGCATAGTTGAAGCAAATCCTAGAAAATTCAACTTGGATGCAACTGAATTGAGCATAAGAAAAGCCTTCATCACAAGTACTCGGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027743.13 ENSMUST00000193059.6 ENSMUST00000195302.6 |
||
| CDS GCA 72 bp | CACACGGCCTGTTCCTCCAGCTCCCCTCCGATGCGCTaGGACATGTTCTTCAGCACCCCGATGCTGCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: HTACSSSSPPMR*DMFFSTPMLPE Trigger: CTCTGGCAGCATCGGGGTGCTGAAGAACATGTCGCAGCGCATCGGAGGGGAGCTGGAGGAACAGGCCGTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193059.6 |
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| CDS GCA 72 bp | ATGACGGCCTGTTCCTCCAGCTCCCCTCCGATGCGCTaGGACATGTTCTTCAGCACCCCGATGCTGCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: MTACSSSSPPMR*DMFFSTPMLPE Trigger: CTCTGGCAGCATCGGGGTGCTGAAGAACATGTCGCAGCGCATCGGAGGGGAGCTGGAGGAACAGGCCGTCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027743.13 ENSMUST00000192690.2 ENSMUST00000195302.6 |
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| CDS CCA 72 bp | TCAGCACGACCACCAGGACCGCGAAGAGGATGGCTATaGCACACCACTGGCGCCGATCACTGGTCATGTGAG | + |
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Preference number: 6 (lower is better) Translates to: SARPPGPRRGWL*HTTGADHWSCE Trigger: CTCACATGACCAGTGATCGGCGCCAGTGGTGTGCCATAGCCATCCTCTTCGCGGTCCTGGTGGTCGTGCTGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| CDS CCA 72 bp | AGAGGATCAGCACGACCACCAGGACCGCGAAGAGGATaGCTATGGCACACCACTGGCGCCGATCACTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: RGSARPPGPRRG*LWHTTGADHWS Trigger: TGACCAGTGATCGGCGCCAGTGGTGTGCCATAGCCATCCTCTTCGCGGTCCTGGTGGTCGTGCTGATCCTCT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| CDS GCA 72 bp | CTCCGATGCGCTGCGACATGTTCTTCAGCACCCCGATaGTGCCAGAGACCAGCTCCAACTGCTCATCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LRCAATCSSAPR*CQRPAPTAHPA Trigger: AGCAGGATGAGCAGTTGGAGCTGGTCTCTGGCAGCATCGGGGTGCTGAAGAACATGTCGCAGCGCATCGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027743.13 ENSMUST00000192690.2 ENSMUST00000193059.6 ENSMUST00000195302.6 |
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| CDS GCA 72 bp | CGATGCGCTGCGACATGTTCTTCAGCACCCCGATGCTaGCAGAGACCAGCTCCAACTGCTCATCCTGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: RCAATCSSAPRC*QRPAPTAHPAV Trigger: AACAGCAGGATGAGCAGTTGGAGCTGGTCTCTGGCAGCATCGGGGTGCTGAAGAACATGTCGCAGCGCATCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027743.13 ENSMUST00000192690.2 ENSMUST00000193059.6 ENSMUST00000195302.6 |
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| CDS CAA 72 bp | TCCTCAGCTCGTTGGTGGTCCAGTCGATTTCTTCCCTaGTTGCTGCAGAGGGGCCCTGAAGGAGCTCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: SSARWWSSRFLP*LLQRGPEGALS Trigger: GGACAGAGCTCCTTCAGGGCCCCTCTGCAGCAACAAGGGAAGAAATCGACTGGACCACCAACGAGCTGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027743.13 ENSMUST00000193059.6 ENSMUST00000195302.6 |
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| CDS CAA 90 bp | TCCTCCAGATCCCACTCTATGCTGCGGAGATTGTTCCTCAGCTCGTaGGTGGTCCAGTCGATTTCTTCCCTTGTTGCTGCAGAGGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: SSRSHSMLRRLFLSS*VVQSISSLVAAEGP Trigger: GGGCCCCTCTGCAGCAACAAGGGAAGAAATCGACTGGACCACCAACGAGCTGAGGAACAATCTCCGCAGCATAGAGTGGGATCTGGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027743.13 ENSMUST00000193059.6 ENSMUST00000195302.6 |
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| CDS GCA 72 bp | CTCGTTGGTGGTCCAGTCGATTTCTTCCCTTGTTGCTaGAGAGGGGCCCTGAAGGAGCTCTGTCCATCTCTG | + |
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Preference number: 6 (lower is better) Translates to: LVGGPVDFFPCC*RGALKELCPSL Trigger: CAGAGATGGACAGAGCTCCTTCAGGGCCCCTCTGCAGCAACAAGGGAAGAAATCGACTGGACCACCAACGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027743.13 ENSMUST00000193059.6 ENSMUST00000195302.6 |
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| CDS CAA 90 bp | GGAGATTGTTCCTCAGCTCGTTGGTGGTCCAGTCGATTTCTTCCCTaGTTGCTGCAGAGGGGCCCTGAAGGAGCTCTGTCCATCTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: GDCSSARWWSSRFLP*LLQRGPEGALSISE Trigger: TTCAGAGATGGACAGAGCTCCTTCAGGGCCCCTCTGCAGCAACAAGGGAAGAAATCGACTGGACCACCAACGAGCTGAGGAACAATCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027743.13 ENSMUST00000193059.6 ENSMUST00000195302.6 |
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| CDS GCA 72 bp | TGGTTTCATCGAGGTCCTCCAGATCCCACTCTATGCTaGGGAGATTGTTCCTCAGCTCGTTGGTGGTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: WFHRGPPDPTLC*GDCSSARWWSS Trigger: ACTGGACCACCAACGAGCTGAGGAACAATCTCCGCAGCATAGAGTGGGATCTGGAGGACCTCGATGAAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027743.13 ENSMUST00000193059.6 ENSMUST00000195302.6 |
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| CDS CAA 72 bp | TCGAGGTCCTCCAGATCCCACTCTATGCTGCGGAGATaGTTCCTCAGCTCGTTGGTGGTCCAGTCGATTTCT | + |
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Preference number: 6 (lower is better) Translates to: SRSSRSHSMLRR*FLSSLVVQSIS Trigger: AGAAATCGACTGGACCACCAACGAGCTGAGGAACAATCTCCGCAGCATAGAGTGGGATCTGGAGGACCTCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027743.13 ENSMUST00000193059.6 ENSMUST00000195302.6 |
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| CDS CAA 90 bp | GATTGTTCCTCAGCTCGTTGGTGGTCCAGTCGATTTCTTCCCTTGTaGCTGCAGAGGGGCCCTGAAGGAGCTCTGTCCATCTCTGAAACA | + |
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Preference number: 6 (lower is better) Translates to: DCSSARWWSSRFLPL*LQRGPEGALSISET Trigger: TGTTTCAGAGATGGACAGAGCTCCTTCAGGGCCCCTCTGCAGCAACAAGGGAAGAAATCGACTGGACCACCAACGAGCTGAGGAACAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027743.13 ENSMUST00000193059.6 ENSMUST00000195302.6 |
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| CDS CCA 72 bp | ACTCTATGCTGCGGAGATTGTTCCTCAGCTCGTTGGTaGTCCAGTCGATTTCTTCCCTTGTTGCTGCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: TLCCGDCSSARW*SSRFLPLLLQR Trigger: CCTCTGCAGCAACAAGGGAAGAAATCGACTGGACCACCAACGAGCTGAGGAACAATCTCCGCAGCATAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027743.13 ENSMUST00000193059.6 ENSMUST00000195302.6 |
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| CDS CAA 90 bp | TGCAGAGGGGCCCTGAAGGAGCTCTGTCCATCTCTGAAACAATCCTaGGGCAGTGTTGACTGCTTTCTGTACCTCTCCCTTCACTACAAA | + |
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Preference number: 6 (lower is better) Translates to: CRGALKELCPSLKQS*GSVDCFLYLSLHYK Trigger: TTTGTAGTGAAGGGAGAGGTACAGAAAGCAGTCAACACTGCCCAAGGATTGTTTCAGAGATGGACAGAGCTCCTTCAGGGCCCCTCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027743.13 ENSMUST00000193059.6 ENSMUST00000195302.6 |
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| CDS CAA 90 bp | ATGGTTTCATCGAGGTCCTCCAGATCCCACTCTATGCTGCGGAGATaGTTCCTCAGCTCGTTGGTGGTCCAGTCGATTTCTTCCCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: MVSSRSSRSHSMLRR*FLSSLVVQSISSLV Trigger: AACAAGGGAAGAAATCGACTGGACCACCAACGAGCTGAGGAACAATCTCCGCAGCATAGAGTGGGATCTGGAGGACCTCGATGAAACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027743.13 ENSMUST00000193059.6 ENSMUST00000195302.6 |
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| CDS CAA 90 bp | CTATGGCACACCACTGGCGCCGATCACTGGTCATGTGAGACACTTTaGCAAGTTTCTTCATCACGTTGTCCAGTCGAGACTGAGTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: LWHTTGADHWSCETL*QVSSSRCPVETECS Trigger: AGAGCACTCAGTCTCGACTGGACAACGTGATGAAGAAACTTGCAAAAGTGTCTCACATGACCAGTGATCGGCGCCAGTGGTGTGCCATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| CDS GCA 72 bp | CCACTGGCGCCGATCACTGGTCATGTGAGACACTTTTaGAAGTTTCTTCATCACGTTGTCCAGTCGAGACTG | + |
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Preference number: 6 (lower is better) Translates to: PLAPITGHVRHF*KFLHHVVQSRL Trigger: CAGTCTCGACTGGACAACGTGATGAAGAAACTTGCAAAAGTGTCTCACATGACCAGTGATCGGCGCCAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| CDS CAA 72 bp | GCCCTGAAGGAGCTCTGTCCATCTCTGAAACAATCCTaGGGCAGTGTTGACTGCTTTCTGTACCTCTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: ALKELCPSLKQS*GSVDCFLYLSL Trigger: AAGGGAGAGGTACAGAAAGCAGTCAACACTGCCCAAGGATTGTTTCAGAGATGGACAGAGCTCCTTCAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027743.13 ENSMUST00000193059.6 ENSMUST00000195302.6 |
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| CDS CAA 72 bp | ACCACTGGCGCCGATCACTGGTCATGTGAGACACTTTaGCAAGTTTCTTCATCACGTTGTCCAGTCGAGACT | + |
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Preference number: 6 (lower is better) Translates to: TTGADHWSCETL*QVSSSRCPVET Trigger: AGTCTCGACTGGACAACGTGATGAAGAAACTTGCAAAAGTGTCTCACATGACCAGTGATCGGCGCCAGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027743.13 |
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| CDS TCA 72 bp | CTTTCAGCCAGTGCCTGCACAGATGAAGCTGACATCTaGTCCTTCATGTCCCTGACAATTTGCCGAGTACTT | + |
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Preference number: 6 (lower is better) Translates to: LSASACTDEADI*SFMSLTICRVL Trigger: AAGTACTCGGCAAATTGTCAGGGACATGAAGGATCAGATGTCAGCTTCATCTGTGCAGGCACTGGCTGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027743.13 ENSMUST00000193059.6 ENSMUST00000195302.6 |
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| CDS GCA 72 bp | CAATTCAGTTGCATCCAAGTTGAATTTTCTAGGATTTaGTTCAACTATGCTGATGGTTTCATCGAGGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: QFSCIQVEFSRI*FNYADGFIEVL Trigger: GAGGACCTCGATGAAACCATCAGCATAGTTGAAGCAAATCCTAGAAAATTCAACTTGGATGCAACTGAATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027743.13 ENSMUST00000193059.6 ENSMUST00000195302.6 |
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| CDS CAA 90 bp | CTTGTGATGAAGGCTTTTCTTATGCTCAATTCAGTTGCATCCAAGTaGAATTTTCTAGGATTTGCTTCAACTATGCTGATGGTTTCATCG | + |
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Preference number: 6 (lower is better) Translates to: LVMKAFLMLNSVASK*NFLGFASTMLMVSS Trigger: CGATGAAACCATCAGCATAGTTGAAGCAAATCCTAGAAAATTCAACTTGGATGCAACTGAATTGAGCATAAGAAAAGCCTTCATCACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027743.13 ENSMUST00000193059.6 ENSMUST00000195302.6 |
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| CDS CAA 72 bp | AAGGCTTTTCTTATGCTCAATTCAGTTGCATCCAAGTaGAATTTTCTAGGATTTGCTTCAACTATGCTGATG | + |
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Preference number: 6 (lower is better) Translates to: KAFLMLNSVASK*NFLGFASTMLM Trigger: CATCAGCATAGTTGAAGCAAATCCTAGAAAATTCAACTTGGATGCAACTGAATTGAGCATAAGAAAAGCCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027743.13 ENSMUST00000193059.6 ENSMUST00000195302.6 |
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