Pregenerated sensors for STX4A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030805Ensembl transcript IDs: ENSMUST00000033075.14, ENSMUST00000121705.8, ENSMUST00000156537.8
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCCAACCCAGGACGAGCCGCAGGCCCTCTGCACAAGGTCCAGTGTaGGGACGGGTTCAGTTGGAGGCCTGCCCCACCTCCACAAAAGCT | + |
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Preference number: 1 (lower is better) Translates to: CQPRTSRRPSAQGPV*GRVQLEACPTSTKA Trigger: AGCTTTTGTGGAGGTGGGGCAGGCCTCCAACTGAACCCGTCCGCACACTGGACCTTGTGCAGAGGGCCTGCGGCTCGTCCTGGGTTGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
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| 3UTR TCA 90 bp | GGCCCTGCTTCATGCTCTCCTCGGGAAGAGGCGTGGCCAGGATGGTaGCCTGCTGTTTCTCCAACTCCCGGACTTTACTCTCCAGTTTGG | + |
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Preference number: 1 (lower is better) Translates to: GPASCSPREEAWPGW*PAVSPTPGLYSPVW Trigger: CCAAACTGGAGAGTAAAGTCCGGGAGTTGGAGAAACAGCAGGTCACCATCCTGGCCACGCCTCTTCCCGAGGAGAGCATGAAGCAGGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| 3UTR TCA 90 bp | GCTCTATGGCTTTTAGCTGCGCCCGGACCTCTCTCCCCAGCTGTTTaGTCTCCTCTCGCAGGTTCTGCAGGCCCTGCTTCATGCTCTCCT | + |
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Preference number: 1 (lower is better) Translates to: ALWLLAAPGPLSPAV*SPLAGSAGPASCSP Trigger: AGGAGAGCATGAAGCAGGGCCTGCAGAACCTGCGAGAGGAGATCAAACAGCTGGGGAGAGAGGTCCGGGCGCAGCTAAAAGCCATAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| 3UTR CCA 90 bp | GTGCGGACGGGTTCAGTTGGAGGCCTGCCCCACCTCCACAAAAGCTaGGTCTCTGTCTCTCCCAATGCCTGCAAGGGAAGGAGAAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: VRTGSVGGLPHLHKS*VSVSPNACKGRRKK Trigger: TTTCTTTCTCCTTCCCTTGCAGGCATTGGGAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAACTGAACCCGTCCGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121705.8 |
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| 3UTR GCA 90 bp | TGCTTCATGCTCTCCTCGGGAAGAGGCGTGGCCAGGATGGTGACCTaGTGTTTCTCCAACTCCCGGACTTTACTCTCCAGTTTGGCCATA | + |
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Preference number: 1 (lower is better) Translates to: CFMLSSGRGVARMVT*CFSNSRTLLSSLAI Trigger: TATGGCCAAACTGGAGAGTAAAGTCCGGGAGTTGGAGAAACAGCAGGTCACCATCCTGGCCACGCCTCTTCCCGAGGAGAGCATGAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| 3UTR GCA 90 bp | TCACTGTGCCGCGCAGAGATCTCATTCAGGGCCTGCCGAGTCACCTaGGTGTCCTTCAGGATATTAGACACAAACACCTCACTCTGCCCA | + |
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Preference number: 1 (lower is better) Translates to: SLCRAEISFRACRVT*VSFRILDTNTSLCP Trigger: TGGGCAGAGTGAGGTGTTTGTGTCTAATATCCTGAAGGACACGCAGGTGACTCGGCAGGCCCTGAATGAGATCTCTGCGCGGCACAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| 3UTR GCA 90 bp | AACTGCTGGATCTCACTGTGCCGCGCAGAGATCTCATTCAGGGCCTaGCGAGTCACCTGCGTGTCCTTCAGGATATTAGACACAAACACC | + |
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Preference number: 1 (lower is better) Translates to: NCWISLCRAEISFRA*RVTCVSFRILDTNT Trigger: GGTGTTTGTGTCTAATATCCTGAAGGACACGCAGGTGACTCGGCAGGCCCTGAATGAGATCTCTGCGCGGCACAGTGAGATCCAGCAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| 3UTR CCA 90 bp | GTATCCCAGACAAACAGGACATTGAAAACTGTCTCGCAGGCATTGTaGAGGACTCCAGGGGAGGACTCCATGAATGAGCAGCTGCCAACC | + |
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Preference number: 1 (lower is better) Translates to: VSQTNRTLKTVSQAL*RTPGEDSMNEQLPT Trigger: GGTTGGCAGCTGCTCATTCATGGAGTCCTCCCCTGGAGTCCTCCACAATGCCTGCGAGACAGTTTTCAATGTCCTGTTTGTCTGGGATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
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| 3UTR TCA 90 bp | CCTCCGGATCCGCTCCACATTCTTCTCTCGGTATTCGGACTGCATTaGGTTGCACTTGTTGATGAGCTCGACAAATTGCTGGGACAGGAC | + |
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Preference number: 1 (lower is better) Translates to: PPDPLHILLSVFGLH*VALVDELDKLLGQD Trigger: GTCCTGTCCCAGCAATTTGTCGAGCTCATCAACAAGTGCAACTCAATGCAGTCCGAATACCGAGAGAAGAATGTGGAGCGGATCCGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| 3UTR GCA 90 bp | AGCTGCCTCCGGATCCGCTCCACATTCTTCTCTCGGTATTCGGACTaGATTGAGTTGCACTTGTTGATGAGCTCGACAAATTGCTGGGAC | + |
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Preference number: 1 (lower is better) Translates to: SCLRIRSTFFSRYSD*IELHLLMSSTNCWD Trigger: GTCCCAGCAATTTGTCGAGCTCATCAACAAGTGCAACTCAATGCAGTCCGAATACCGAGAGAAGAATGTGGAGCGGATCCGGAGGCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| 3UTR GCA 90 bp | GTCACCTGCGTGTCCTTCAGGATATTAGACACAAACACCTCACTCTaGCCACTGTCCAGCATCTGTTCCAGCTCCTCGTCAGACACCATT | + |
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Preference number: 1 (lower is better) Translates to: VTCVSFRILDTNTSL*PLSSICSSSSSDTI Trigger: AATGGTGTCTGACGAGGAGCTGGAACAGATGCTGGACAGTGGGCAGAGTGAGGTGTTTGTGTCTAATATCCTGAAGGACACGCAGGTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| 3UTR TCA 90 bp | CTGGGACAGGACTCCATGCTGGGTTTTCTTCATCCTTGTGTTGACTaGGTTGTAATTCTCATCAGCTTCCTCCTTCTGGGGCTCTATGGC | + |
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Preference number: 1 (lower is better) Translates to: LGQDSMLGFLHPCVD*VVILISFLLLGLYG Trigger: GCCATAGAGCCCCAGAAGGAGGAAGCTGATGAGAATTACAACTCAGTCAACACAAGGATGAAGAAAACCCAGCATGGAGTCCTGTCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| 3UTR CCA 90 bp | TCGGACTGCATTGAGTTGCACTTGTTGATGAGCTCGACAAATTGCTaGGACAGGACTCCATGCTGGGTTTTCTTCATCCTTGTGTTGACT | + |
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Preference number: 1 (lower is better) Translates to: SDCIELHLLMSSTNC*DRTPCWVFFILVLT Trigger: AGTCAACACAAGGATGAAGAAAACCCAGCATGGAGTCCTGTCCCAGCAATTTGTCGAGCTCATCAACAAGTGCAACTCAATGCAGTCCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| 3UTR GCA 90 bp | TATTCGGACTGCATTGAGTTGCACTTGTTGATGAGCTCGACAAATTaGTGGGACAGGACTCCATGCTGGGTTTTCTTCATCCTTGTGTTG | + |
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Preference number: 1 (lower is better) Translates to: YSDCIELHLLMSSTN*WDRTPCWVFFILVL Trigger: CAACACAAGGATGAAGAAAACCCAGCATGGAGTCCTGTCCCAGCAATTTGTCGAGCTCATCAACAAGTGCAACTCAATGCAGTCCGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| 3UTR CAA 90 bp | GGCTCTATGGCTTTTAGCTGCGCCCGGACCTCTCTCCCCAGCTGTTaGATCTCCTCTCGCAGGTTCTGCAGGCCCTGCTTCATGCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: GSMAFSCARTSLPSC*ISSRRFCRPCFMLS Trigger: GGAGAGCATGAAGCAGGGCCTGCAGAACCTGCGAGAGGAGATCAAACAGCTGGGGAGAGAGGTCCGGGCGCAGCTAAAAGCCATAGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| 3UTR-3UTR GCA 90 bp | CGGGTTCAGTTGGAGGCCTGCCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTCGCACAAGGTCCAGTGTaGGGACGGGTTCAGTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: RVQLEACPTSTKAGSLSLAQGPV*GRVQLE Trigger: CTCCAACTGAACCCGTCCGCACACTGGACCTTGTGC...GAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAACTGAACCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTTGGAGGCCTGCCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTCCCAATGGCACAAGGTCCAGTGTaGGGACGGGTTCAGTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: QLEACPTSTKAGSLSLPMAQGPV*GRVQLE Trigger: CTCCAACTGAACCCGTCCGCACACTGGACCTTGTGC...CATTGGGAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
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| 3UTR-3UTR GCA 90 bp | ACGGGTTCAGTTGGAGGCCTGCCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTGTTCAGTTGGAGGCCTaGCCCACCTCCACAAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: TGSVGGLPHLHKSWVSVSVQLEA*PTSTKA Trigger: AGCTTTTGTGGAGGTGGGGCAGGCCTCCAACTGAAC...AGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAACTGAACCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
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| 3UTR-3UTR CCA 90 bp | TTGAAAACTGTCTCGCAGGCATTGTGGAGGACTCCAGGGGAGGACTCCATGAATGCGGACGGGTTCAGTTaGAGGCCTGCCCCACCTCCA | + |
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Preference number: 2 (lower is better) Translates to: LKTVSQALWRTPGEDSMNADGFS*RPAPPP Trigger: TGGAGGTGGGGCAGGCCTCCAACTGAACCCGTCCGC...ATTCATGGAGTCCTCCCCTGGAGTCCTCCACAATGCCTGCGAGACAGTTTTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
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| 3UTR-3UTR TCA 90 bp | TCCAGCTCCTCGTCAGACACCATTCCAGCATTGGTGATCTTCAGCTGCCTCCGGCTCTCCCCAGCTGTTTaGTCTCCTCTCGCAGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: SSSSSDTIPALVIFSCLRLSPAV*SPLAGS Trigger: AGAACCTGCGAGAGGAGATCAAACAGCTGGGGAGAG...CCGGAGGCAGCTGAAGATCACCAATGCTGGAATGGTGTCTGACGAGGAGCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTCCCAATGCCTGCAAGGGACACCTCCACAAAAGCTaGGTCTCTGTCTCTCCCAAT | + |
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Preference number: 2 (lower is better) Translates to: LPHLHKSWVSVSPNACKGHLHKS*VSVSPN Trigger: ATTGGGAGAGACAGAGACCCAGCTTTTGTGGAGGTG...TCCCTTGCAGGCATTGGGAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000121705.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCAGGGCCTGCCGAGTCACCTGCGTGTCCTTCAGGATATTAGACACAAACACGCGTGGCCAGGATGGTaGCCTGCTGTTTCTCCAACT | + |
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Preference number: 2 (lower is better) Translates to: IQGLPSHLRVLQDIRHKHAWPGW*PAVSPT Trigger: AGTTGGAGAAACAGCAGGTCACCATCCTGGCCACGC...GTGTTTGTGTCTAATATCCTGAAGGACACGCAGGTGACTCGGCAGGCCCTGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| 3UTR CAA 90 bp | CATGTATCCCAGACAAACAGGACATTGAAAACTGTCTCGCAGGCATaGTGGAGGACTCCAGGGGAGGACTCCATGAATGAGCAGCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: HVSQTNRTLKTVSQA*WRTPGEDSMNEQLP Trigger: TGGCAGCTGCTCATTCATGGAGTCCTCCCCTGGAGTCCTCCACAATGCCTGCGAGACAGTTTTCAATGTCCTGTTTGTCTGGGATACATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
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| 3UTR CAA 90 bp | CGCTCCACATTCTTCTCTCGGTATTCGGACTGCATTGAGTTGCACTaGTTGATGAGCTCGACAAATTGCTGGGACAGGACTCCATGCTGG | + |
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Preference number: 2 (lower is better) Translates to: RSTFFSRYSDCIELH*LMSSTNCWDRTPCW Trigger: CCAGCATGGAGTCCTGTCCCAGCAATTTGTCGAGCTCATCAACAAGTGCAACTCAATGCAGTCCGAATACCGAGAGAAGAATGTGGAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| 3UTR CAA 90 bp | CGGATCCGCTCCACATTCTTCTCTCGGTATTCGGACTGCATTGAGTaGCACTTGTTGATGAGCTCGACAAATTGCTGGGACAGGACTCCA | + |
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Preference number: 2 (lower is better) Translates to: RIRSTFFSRYSDCIE*HLLMSSTNCWDRTP Trigger: TGGAGTCCTGTCCCAGCAATTTGTCGAGCTCATCAACAAGTGCAACTCAATGCAGTCCGAATACCGAGAGAAGAATGTGGAGCGGATCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| 3UTR CAA 90 bp | TCCACATTCTTCTCTCGGTATTCGGACTGCATTGAGTTGCACTTGTaGATGAGCTCGACAAATTGCTGGGACAGGACTCCATGCTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: STFFSRYSDCIELHL*MSSTNCWDRTPCWV Trigger: AACCCAGCATGGAGTCCTGTCCCAGCAATTTGTCGAGCTCATCAACAAGTGCAACTCAATGCAGTCCGAATACCGAGAGAAGAATGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| 3UTR-3UTR TCA 90 bp | GAGTTGCACTTGTTGATGAGCTCGACAAATTGCTGGGACAGGACTCCATGCTGGTCTTCATCCTTGTGTTaGCTGAGTTGTAATTCTCAT | + |
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Preference number: 2 (lower is better) Translates to: ELHLLMSSTNCWDRTPCWSSSLC*LSCNSH Trigger: ATGAGAATTACAACTCAGTCAACACAAGGATGAAGA...CCAGCATGGAGTCCTGTCCCAGCAATTTGTCGAGCTCATCAACAAGTGCAACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| 3UTR GCA 72 bp | AGGACGAGCCGCAGGCCCTCTGCACAAGGTCCAGTGTaGGGACGGGTTCAGTTGGAGGCCTGCCCCACCTCC | + |
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Preference number: 3 (lower is better) Translates to: RTSRRPSAQGPV*GRVQLEACPTS Trigger: GGAGGTGGGGCAGGCCTCCAACTGAACCCGTCCGCACACTGGACCTTGTGCAGAGGGCCTGCGGCTCGTCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
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| 3UTR TCA 72 bp | GGCATTGTGGAGGACTCCAGGGGAGGACTCCATGAATaGGCAGCTGCCAACCCAGGACGAGCCGCAGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: GIVEDSRGGLHE*AAANPGRAAGP Trigger: AGGGCCTGCGGCTCGTCCTGGGTTGGCAGCTGCTCATTCATGGAGTCCTCCCCTGGAGTCCTCCACAATGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
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| 3UTR GCA 72 bp | GAAAGAAATGGGTCTGACAGGAGGCGGGGAGGCTGCTaGCAGGGATGGGGCAGGCCCGCCATTTCTCACCAA | + |
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Preference number: 3 (lower is better) Translates to: ERNGSDRRRGGC*QGWGRPAISHQ Trigger: TTGGTGAGAAATGGCGGGCCTGCCCCATCCCTGGCAGCAGCCTCCCCGCCTCCTGTCAGACCCATTTCTTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121705.8 |
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| 3UTR GCA 72 bp | CAAGGTCCAGTGTGCGGACGGGTTCAGTTGGAGGCCTaGCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: QGPVCGRVQLEA*PTSTKAGSLSL Trigger: GAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAACTGAACCCGTCCGCACACTGGACCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
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| 3UTR CCA 72 bp | GGTTCAGTTGGAGGCCTGCCCCACCTCCACAAAAGCTaGGTCTCTGTCTCTCCCAATGCCTGCAAGGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: GSVGGLPHLHKS*VSVSPNACKGR Trigger: CCTTCCCTTGCAGGCATTGGGAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAACTGAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121705.8 |
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| 3UTR TCA 72 bp | TCATGCTCTCCTCGGGAAGAGGCGTGGCCAGGATGGTaGCCTGCTGTTTCTCCAACTCCCGGACTTTACTCT | + |
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Preference number: 3 (lower is better) Translates to: SCSPREEAWPGW*PAVSPTPGLYS Trigger: AGAGTAAAGTCCGGGAGTTGGAGAAACAGCAGGTCACCATCCTGGCCACGCCTCTTCCCGAGGAGAGCATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| 3UTR GCA 72 bp | ATCTCACTGTGCCGCGCAGAGATCTCATTCAGGGCCTaGCGAGTCACCTGCGTGTCCTTCAGGATATTAGAC | + |
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Preference number: 3 (lower is better) Translates to: ISLCRAEISFRA*RVTCVSFRILD Trigger: GTCTAATATCCTGAAGGACACGCAGGTGACTCGGCAGGCCCTGAATGAGATCTCTGCGCGGCACAGTGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| 3UTR-3UTR CAA 90 bp | CAGCTCCTCGTCAGACACCATTCCAGCATTGGTGATCTTCAGCTGCCTCCGGATGATGAGCTCGACAAATaGCTGGGACAGGACTCCATG | + |
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Preference number: 3 (lower is better) Translates to: QLLVRHHSSIGDLQLPPDDELDK*LGQDSM Trigger: CATGGAGTCCTGTCCCAGCAATTTGTCGAGCTCATC...ATCCGGAGGCAGCTGAAGATCACCAATGCTGGAATGGTGTCTGACGAGGAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| 3UTR GCA 72 bp | CGCGCAGAGATCTCATTCAGGGCCTGCCGAGTCACCTaGGTGTCCTTCAGGATATTAGACACAAACACCTCA | + |
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Preference number: 3 (lower is better) Translates to: RAEISFRACRVT*VSFRILDTNTS Trigger: TGAGGTGTTTGTGTCTAATATCCTGAAGGACACGCAGGTGACTCGGCAGGCCCTGAATGAGATCTCTGCGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| 3UTR-3UTR CAA 90 bp | GAGTTGCACTTGTTGATGAGCTCGACAAATTGCTGGGACAGGACTCCATGCTGGTCTCTCCCCAGCTGTTaGATCTCCTCTCGCAGGTTC | + |
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Preference number: 3 (lower is better) Translates to: ELHLLMSSTNCWDRTPCWSLPSC*ISSRRF Trigger: GAACCTGCGAGAGGAGATCAAACAGCTGGGGAGAGA...CCAGCATGGAGTCCTGTCCCAGCAATTTGTCGAGCTCATCAACAAGTGCAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| 3UTR GCA 72 bp | CCACCTCCACAAAAGCTGGGTCTCTGTCTCTCCCAATaGCTGCAAGGGAAGGAGAAAGAAATGGGTCTGACA | + |
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Preference number: 3 (lower is better) Translates to: PPPQKLGLCLSQ*LQGKEKEMGLT Trigger: TGTCAGACCCATTTCTTTCTCCTTCCCTTGCAGGCATTGGGAGAGACAGAGACCCAGCTTTTGTGGAGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121705.8 |
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| 3UTR-3UTR CAA 90 bp | ATTCAGGGCCTGCCGAGTCACCTGCGTGTCCTTCAGGATATTAGACACAAACACGACACCATTCCAGCATaGGTGATCTTCAGCTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: IQGLPSHLRVLQDIRHKHDTIPA*VIFSCL Trigger: GAGGCAGCTGAAGATCACCAATGCTGGAATGGTGTC...GTGTTTGTGTCTAATATCCTGAAGGACACGCAGGTGACTCGGCAGGCCCTGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| 3UTR-3UTR CAA 90 bp | GTAAAGATCTCATGGAGCTCTCGGATACTGCGCTCCAACTGCTGGATCTCACTGTCGGACTGCATTGAGTaGCACTTGTTGATGAGCTCG | + |
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Preference number: 3 (lower is better) Translates to: VKISWSSRILRSNCWISLSDCIE*HLLMSS Trigger: CGAGCTCATCAACAAGTGCAACTCAATGCAGTCCGA...CAGTGAGATCCAGCAGTTGGAGCGCAGTATCCGAGAGCTCCATGAGATCTTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| 3UTR-3UTR CAA 90 bp | GTAAAGATCTCATGGAGCTCTCGGATACTGCGCTCCAACTGCTGGATCTCACTGACTTTACTCTCCAGTTaGGCCATAGTCTGCCGAATT | + |
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Preference number: 3 (lower is better) Translates to: VKISWSSRILRSNCWISLTLLSS*AIVCRI Trigger: AATTCGGCAGACTATGGCCAAACTGGAGAGTAAAGT...CAGTGAGATCCAGCAGTTGGAGCGCAGTATCCGAGAGCTCCATGAGATCTTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| 3UTR GCA 72 bp | CGGATCCGCTCCACATTCTTCTCTCGGTATTCGGACTaGATTGAGTTGCACTTGTTGATGAGCTCGACAAAT | + |
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Preference number: 3 (lower is better) Translates to: RIRSTFFSRYSD*IELHLLMSSTN Trigger: ATTTGTCGAGCTCATCAACAAGTGCAACTCAATGCAGTCCGAATACCGAGAGAAGAATGTGGAGCGGATCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| 3UTR TCA 72 bp | GACTCCATGCTGGGTTTTCTTCATCCTTGTGTTGACTaGGTTGTAATTCTCATCAGCTTCCTCCTTCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: DSMLGFLHPCVD*VVILISFLLLG Trigger: CCCCAGAAGGAGGAAGCTGATGAGAATTACAACTCAGTCAACACAAGGATGAAGAAAACCCAGCATGGAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| 3UTR GCA 72 bp | TGCATTGAGTTGCACTTGTTGATGAGCTCGACAAATTaGTGGGACAGGACTCCATGCTGGGTTTTCTTCATC | + |
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Preference number: 3 (lower is better) Translates to: CIELHLLMSSTN*WDRTPCWVFFI Trigger: GATGAAGAAAACCCAGCATGGAGTCCTGTCCCAGCAATTTGTCGAGCTCATCAACAAGTGCAACTCAATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| CDS-3UTR TCA 90 bp | GCCCTCTGCACAAGGTCCAGTGTGCGGACGGGTTCAGTTGGAGGCCTGCCCCACCAACCGGGCAGCACCTaGGTGCACCACCAGCGCGAC | + |
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Preference number: 4 (lower is better) Translates to: ALCTRSSVRTGSVGGLPHQPGST*VHHQRD Trigger: GTCGCGCTGGTGGTGCACTCAGGTGCTGCCCGGTTG...GTGGGGCAGGCCTCCAACTGAACCCGTCCGCACACTGGACCTTGTGCAGAGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
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| CDS-3UTR TCA 90 bp | CTCGGGAAGAGGCGTGGCCAGGATGGTGACCTGCTGTTTCTCCAACTCCCGGACCAACCGGGCAGCACCTaGGTGCACCACCAGCGCGAC | + |
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Preference number: 4 (lower is better) Translates to: LGKRRGQDGDLLFLQLPDQPGST*VHHQRD Trigger: GTCGCGCTGGTGGTGCACTCAGGTGCTGCCCGGTTG...GTCCGGGAGTTGGAGAAACAGCAGGTCACCATCCTGGCCACGCCTCTTCCCGAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| CDS-3UTR GCA 90 bp | GGCCCTCTGCACAAGGTCCAGTGTGCGGACGGGTTCAGTTGGAGGCCTGCCCCAGCAGGCCCTGCTTCATaGTCTCCTCGGGAAGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GPLHKVQCADGFSWRPAPAGPAS*SPREEA Trigger: CGCCTCTTCCCGAGGAGAGCATGAAGCAGGGCCTGC...TGGGGCAGGCCTCCAACTGAACCCGTCCGCACACTGGACCTTGTGCAGAGGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR GCA 90 bp | CCCTCTGCACAAGGTCCAGTGTGCGGACGGGTTCAGTTGGAGGCCTGCCCCACCGCAGGCCCTGCTTCATaGTCTCCTCGGGAAGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PSAQGPVCGRVQLEACPTAGPAS*SPREEA Trigger: CGCCTCTTCCCGAGGAGAGCATGAAGCAGGGCCTGC...GGTGGGGCAGGCCTCCAACTGAACCCGTCCGCACACTGGACCTTGTGCAGAGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTGCCAACCCAGGACGAGCCGCAGGCCCTCTGCACAAGGTCCAGTGTGCGGAGGGCTATCTTGACGTaGTCTTGCCCACGTTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: QLPTQDEPQALCTRSSVRRAILT*SCPRST Trigger: CGTGGAACGTGGGCAAGAGCACGTCAAGATAGCCCT...CCGCACACTGGACCTTGTGCAGAGGGCCTGCGGCTCGTCCTGGGTTGGCAGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR TCA 90 bp | ACTGTCTCGCAGGCATTGTGGAGGACTCCAGGGGAGGACTCCATGAATGAGCAGCAACCGGGCAGCACCTaGGTGCACCACCAGCGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: TVSQALWRTPGEDSMNEQQPGST*VHHQRD Trigger: GTCGCGCTGGTGGTGCACTCAGGTGCTGCCCGGTTG...CTGCTCATTCATGGAGTCCTCCCCTGGAGTCCTCCACAATGCCTGCGAGACAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR GCA 90 bp | GCCCTCTGCACAAGGTCCAGTGTGCGGACGGGTTCAGTTGGAGGCCTGCCCCACAGGGCTATCTTGACGTaGTCTTGCCCACGTTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: ALCTRSSVRTGSVGGLPHRAILT*SCPRST Trigger: CGTGGAACGTGGGCAAGAGCACGTCAAGATAGCCCT...GTGGGGCAGGCCTCCAACTGAACCCGTCCGCACACTGGACCTTGTGCAGAGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| 3UTR CAA 72 bp | CCCTCTGCACAAGGTCCAGTGTGCGGACGGGTTCAGTaGGAGGCCTGCCCCACCTCCACAAAAGCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSAQGPVCGRVQ*EACPTSTKAGS Trigger: AGACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAACTGAACCCGTCCGCACACTGGACCTTGTGCAGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTGCGGACGGGTTCAGTTGGAGGCCTGCCCCACCTCCACAAAAGCTGGGTCGCGTGGCCAGGATGGTaGCCTGCTGTTTCTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: SVRTGSVGGLPHLHKSWVAWPGW*PAVSPT Trigger: AGTTGGAGAAACAGCAGGTCACCATCCTGGCCACGC...GACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAACTGAACCCGTCCGCACACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR GCA 90 bp | GCGGACGGGTTCAGTTGGAGGCCTGCCCCACCTCCACAAAAGCTGGGTCTCTGTATCTCATTCAGGGCCTaGCGAGTCACCTGCGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ADGFSWRPAPPPQKLGLCISFRA*RVTCVS Trigger: GGACACGCAGGTGACTCGGCAGGCCCTGAATGAGAT...ACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAACTGAACCCGTCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR TCA 90 bp | CGGGTTCAGTTGGAGGCCTGCCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTCGCGTGGCCAGGATGGTaGCCTGCTGTTTCTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: RVQLEACPTSTKAGSLSLAWPGW*PAVSPT Trigger: AGTTGGAGAAACAGCAGGTCACCATCCTGGCCACGC...GAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAACTGAACCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR TCA 90 bp | GGTTCAGTTGGAGGCCTGCCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTCCCCTCTCCCCAGCTGTTTaGTCTCCTCTCGCAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSVGGLPHLHKSWVSVSPLSPAV*SPLAGS Trigger: AGAACCTGCGAGAGGAGATCAAACAGCTGGGGAGAG...GGGAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAACTGAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTGCCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTCCCAATGCCAAGAACTCCTCTCGCAGGTTCTaGAGGCCCTGCTTCATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLPHLHKSWVSVSPNAKNSSRRF*RPCFML Trigger: GAGCATGAAGCAGGGCCTGCAGAACCTGCGAGAGGA...GTTCTTGGCATTGGGAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033075.14 |
||
| CDS-3UTR GCA 90 bp | ACGGGTTCAGTTGGAGGCCTGCCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTTCCTCTCGCAGGTTCTaGAGGCCCTGCTTCATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TGSVGGLPHLHKSWVSVSSSRRF*RPCFML Trigger: GAGCATGAAGCAGGGCCTGCAGAACCTGCGAGAGGA...AGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAACTGAACCCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTGCGGACGGGTTCAGTTGGAGGCCTGCCCCACCTCCACAAAAGCTGGGTCGCCTGCCGAGTCACCTaGGTGTCCTTCAGGATATTA | + |
|
Preference number: 4 (lower is better) Translates to: SVRTGSVGGLPHLHKSWVACRVT*VSFRIL Trigger: TAATATCCTGAAGGACACGCAGGTGACTCGGCAGGC...GACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAACTGAACCCGTCCGCACACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR GCA 90 bp | CAGTTGGAGGCCTGCCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTCCCAATGATCTCATTCAGGGCCTaGCGAGTCACCTGCGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QLEACPTSTKAGSLSLPMISFRA*RVTCVS Trigger: GGACACGCAGGTGACTCGGCAGGCCCTGAATGAGAT...CATTGGGAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR TCA 90 bp | GTTCAGTTGGAGGCCTGCCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTCCCACTCTCCCCAGCTGTTTaGTCTCCTCTCGCAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VQLEACPTSTKAGSLSLPLSPAV*SPLAGS Trigger: AGAACCTGCGAGAGGAGATCAAACAGCTGGGGAGAG...TGGGAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAACTGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR GCA 90 bp | GCGGACGGGTTCAGTTGGAGGCCTGCCCCACCTCCACAAAAGCTGGGTCTCTGTATGAGCTCGACAAATTaGTGGGACAGGACTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: ADGFSWRPAPPPQKLGLCMSSTN*WDRTPC Trigger: GCATGGAGTCCTGTCCCAGCAATTTGTCGAGCTCAT...ACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAACTGAACCCGTCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTGCCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTCCCAATGCCAAGAACTTGGTGATCTTCAGCTaGCTCCGGATCCGCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GLPHLHKSWVSVSPNAKNLVIFS*LRIRST Trigger: TGTGGAGCGGATCCGGAGGCAGCTGAAGATCACCAA...GTTCTTGGCATTGGGAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033075.14 |
||
| CDS-3UTR GCA 90 bp | GTTGGAGGCCTGCCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTCCCAATGCCTGCTGGATCTCACTGTaGCGCGCAGAGATCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: VGGLPHLHKSWVSVSPNACWISL*RAEISF Trigger: GAATGAGATCTCTGCGCGGCACAGTGAGATCCAGCA...GGCATTGGGAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR GCA 90 bp | CGGGTTCAGTTGGAGGCCTGCCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTCTTGATCATCTCCCCCTaGATCTCCACCTCCGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RVQLEACPTSTKAGSLSLLIISP*ISTSVA Trigger: AGCTACGGAGGTGGAGATGCAGGGGGAGATGATCAA...GAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAACTGAACCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR TCA 90 bp | GGCCCTCTGCACAAGGTCCAGTGTGCGGACGGGTTCAGTTGGAGGCCTGCCCCACATCCTTGTGTTGACTaGGTTGTAATTCTCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GPLHKVQCADGFSWRPAPHPCVD*VVILIS Trigger: GCTGATGAGAATTACAACTCAGTCAACACAAGGATG...TGGGGCAGGCCTCCAACTGAACCCGTCCGCACACTGGACCTTGTGCAGAGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR GCA 90 bp | GGGTTCAGTTGGAGGCCTGCCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTCCACAAACACCTCACTCTaGCCACTGTCCAGCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GFSWRPAPPPQKLGLCLSTNTSL*PLSSIC Trigger: ACAGATGCTGGACAGTGGGCAGAGTGAGGTGTTTGT...GGAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAACTGAACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR GCA 90 bp | GTTCAGTTGGAGGCCTGCCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTCCCAGCCTGCCGAGTCACCTaGGTGTCCTTCAGGATATTA | + |
|
Preference number: 4 (lower is better) Translates to: VQLEACPTSTKAGSLSLPACRVT*VSFRIL Trigger: TAATATCCTGAAGGACACGCAGGTGACTCGGCAGGC...TGGGAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAACTGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR CCA 90 bp | GTTGGAGGCCTGCCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTCCCAATGCCTCAGCTTCCTCCTTCTaGGGCTCTATGGCTTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGGLPHLHKSWVSVSPNASASSF*GSMAFS Trigger: GCTAAAAGCCATAGAGCCCCAGAAGGAGGAAGCTGA...GGCATTGGGAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR TCA 90 bp | GGGTTCAGTTGGAGGCCTGCCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTCCTTCCTCGCCTTCTTCTaGTTCTCTAGGGCTATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GFSWRPAPPPQKLGLCLSFLAFF*FSRAIL Trigger: CAAGATAGCCCTAGAGAATCAGAAGAAGGCGAGGAA...GGAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAACTGAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTGCGGACGGGTTCAGTTGGAGGCCTGCCCCACCTCCACAAAAGCTGGGTCTCTCGGTATTCGGACTaGATTGAGTTGCACTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVRTGSVGGLPHLHKSWVSRYSD*IELHLL Trigger: CAACAAGTGCAACTCAATGCAGTCCGAATACCGAGA...GACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAACTGAACCCGTCCGCACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR GCA 90 bp | TCCCAATGCCTGCAAGGGAAGGAGAAAGAAATGGGTCTGACAGGAGGCGGGGAGTGCTGGATCTCACTGTaGCGCGCAGAGATCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: SQCLQGKEKEMGLTGGGECWISL*RAEISF Trigger: GAATGAGATCTCTGCGCGGCACAGTGAGATCCAGCA...CTCCCCGCCTCCTGTCAGACCCATTTCTTTCTCCTTCCCTTGCAGGCATTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121705.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTCCCAATGCCTGCAAGGGATCAGCTTCCTCCTTCTaGGGCTCTATGGCTTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPHLHKSWVSVSPNACKGSASSF*GSMAFS Trigger: GCTAAAAGCCATAGAGCCCCAGAAGGAGGAAGCTGA...TCCCTTGCAGGCATTGGGAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000121705.8 |
||
| CDS-3UTR CCA 90 bp | TTGAAAACTGTCTCGCAGGCATTGTGGAGGACTCCAGGGGAGGACTCCATGAATCTGCGCTCCAACTGCTaGATCTCACTGTGCCGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LKTVSQALWRTPGEDSMNLRSNC*ISLCRA Trigger: TGCGCGGCACAGTGAGATCCAGCAGTTGGAGCGCAG...ATTCATGGAGTCCTCCCCTGGAGTCCTCCACAATGCCTGCGAGACAGTTTTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTGCCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTCCCAATGCCAAGAACTGGGACAGGACTCCATaGTGGGTTTTCTTCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLPHLHKSWVSVSPNAKNWDRTP*WVFFIL Trigger: AAGGATGAAGAAAACCCAGCATGGAGTCCTGTCCCA...GTTCTTGGCATTGGGAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033075.14 |
||
| CDS-3UTR GCA 90 bp | GACATTGAAAACTGTCTCGCAGGCATTGTGGAGGACTCCAGGGGAGGACTCCATTTGGTGATCTTCAGCTaGCTCCGGATCCGCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: DIENCLAGIVEDSRGGLHLVIFS*LRIRST Trigger: TGTGGAGCGGATCCGGAGGCAGCTGAAGATCACCAA...ATGGAGTCCTCCCCTGGAGTCCTCCACAATGCCTGCGAGACAGTTTTCAATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR GCA 90 bp | TGCCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTCCCAATGCCTGCAAGGGAAACAAACACCTCACTCTaGCCACTGTCCAGCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CPTSTKAGSLSLPMPARETNTSL*PLSSIC Trigger: ACAGATGCTGGACAGTGGGCAGAGTGAGGTGTTTGT...TTCCCTTGCAGGCATTGGGAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121705.8 |
||
| CDS-3UTR GCA 90 bp | GACATTGAAAACTGTCTCGCAGGCATTGTGGAGGACTCCAGGGGAGGACTCCATATACTGCGCTCCAACTaGTGGATCTCACTGTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: DIENCLAGIVEDSRGGLHILRSN*WISLCR Trigger: GCGGCACAGTGAGATCCAGCAGTTGGAGCGCAGTAT...ATGGAGTCCTCCCCTGGAGTCCTCCACAATGCCTGCGAGACAGTTTTCAATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTGCCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTCCCAATGCCAAGAACTCTCGGTATTCGGACTaGATTGAGTTGCACTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLPHLHKSWVSVSPNAKNSRYSD*IELHLL Trigger: CAACAAGTGCAACTCAATGCAGTCCGAATACCGAGA...GTTCTTGGCATTGGGAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033075.14 |
||
| CDS-3UTR CCA 90 bp | TCCCAATGCCTGCAAGGGAAGGAGAAAGAAATGGGTCTGACAGGAGGCGGGGAGGACAGGACTCCATGCTaGGTTTTCTTCATCCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SQCLQGKEKEMGLTGGGEDRTPC*VFFILV Trigger: CACAAGGATGAAGAAAACCCAGCATGGAGTCCTGTC...CTCCCCGCCTCCTGTCAGACCCATTTCTTTCTCCTTCCCTTGCAGGCATTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121705.8 |
||
| CDS-3UTR TCA 90 bp | CAGTTGGAGGCCTGCCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTCCCAATGCATCCTTGTGTTGACTaGGTTGTAATTCTCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QLEACPTSTKAGSLSLPMHPCVD*VVILIS Trigger: GCTGATGAGAATTACAACTCAGTCAACACAAGGATG...CATTGGGAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR GCA 90 bp | AAAACTGTCTCGCAGGCATTGTGGAGGACTCCAGGGGAGGACTCCATGAATGAGATGAGCTCGACAAATTaGTGGGACAGGACTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: KTVSQALWRTPGEDSMNEMSSTN*WDRTPC Trigger: GCATGGAGTCCTGTCCCAGCAATTTGTCGAGCTCAT...CTCATTCATGGAGTCCTCCCCTGGAGTCCTCCACAATGCCTGCGAGACAGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR GCA 90 bp | TTGAAAACTGTCTCGCAGGCATTGTGGAGGACTCCAGGGGAGGACTCCATGAATTTGATCATCTCCCCCTaGATCTCCACCTCCGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LKTVSQALWRTPGEDSMNLIISP*ISTSVA Trigger: AGCTACGGAGGTGGAGATGCAGGGGGAGATGATCAA...ATTCATGGAGTCCTCCCCTGGAGTCCTCCACAATGCCTGCGAGACAGTTTTCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR TCA 90 bp | GTTGGAGGCCTGCCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTCCCAATGCCTCTTCATCCTTGTGTTaGCTGAGTTGTAATTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VGGLPHLHKSWVSVSPNASSSLC*LSCNSH Trigger: ATGAGAATTACAACTCAGTCAACACAAGGATGAAGA...GGCATTGGGAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR TCA 90 bp | AAAACTGTCTCGCAGGCATTGTGGAGGACTCCAGGGGAGGACTCCATGAATGAGTTCCTCGCCTTCTTCTaGTTCTCTAGGGCTATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KTVSQALWRTPGEDSMNEFLAFF*FSRAIL Trigger: CAAGATAGCCCTAGAGAATCAGAAGAAGGCGAGGAA...CTCATTCATGGAGTCCTCCCCTGGAGTCCTCCACAATGCCTGCGAGACAGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| CDS-3UTR CCA 90 bp | GACATTGAAAACTGTCTCGCAGGCATTGTGGAGGACTCCAGGGGAGGACTCCATGACAGGACTCCATGCTaGGTTTTCTTCATCCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: DIENCLAGIVEDSRGGLHDRTPC*VFFILV Trigger: CACAAGGATGAAGAAAACCCAGCATGGAGTCCTGTC...ATGGAGTCCTCCCCTGGAGTCCTCCACAATGCCTGCGAGACAGTTTTCAATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
||
| 3UTR CAA 72 bp | TTCTCTCGGTATTCGGACTGCATTGAGTTGCACTTGTaGATGAGCTCGACAAATTGCTGGGACAGGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSRYSDCIELHL*MSSTNCWDRTP Trigger: TGGAGTCCTGTCCCAGCAATTTGTCGAGCTCATCAACAAGTGCAACTCAATGCAGTCCGAATACCGAGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
||
| CDS-3UTR TCA 90 bp | TGCCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTCCCAATGCCAAGAACATGTTCTTCATCCTTGTGTTaGCTGAGTTGTAATTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CPTSTKAGSLSLPMPRTCSSSLC*LSCNSH Trigger: ATGAGAATTACAACTCAGTCAACACAAGGATGAAGA...ACATGTTCTTGGCATTGGGAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033075.14 |
||
| 3UTR CAA 72 bp | TTCTTCTCTCGGTATTCGGACTGCATTGAGTTGCACTaGTTGATGAGCTCGACAAATTGCTGGGACAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: FFSRYSDCIELH*LMSSTNCWDRT Trigger: AGTCCTGTCCCAGCAATTTGTCGAGCTCATCAACAAGTGCAACTCAATGCAGTCCGAATACCGAGAGAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
||
| 3UTR CAA 72 bp | TCCACATTCTTCTCTCGGTATTCGGACTGCATTGAGTaGCACTTGTTGATGAGCTCGACAAATTGCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: STFFSRYSDCIE*HLLMSSTNCWD Trigger: GTCCCAGCAATTTGTCGAGCTCATCAACAAGTGCAACTCAATGCAGTCCGAATACCGAGAGAAGAATGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| CDS GCA 90 bp | TCTGCCGAATTGTCTGCACCTTCTGGAAGAACTCGTCGTCCGGGCTaGCCAACCGGGCAGCACCTGAGTGCACCACCAGCGCGACTCGAA | + |
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Preference number: 5 (lower is better) Translates to: SAELSAPSGRTRRPG*PTGQHLSAPPARLE Trigger: TTCGAGTCGCGCTGGTGGTGCACTCAGGTGCTGCCCGGTTGGGCAGCCCGGACGACGAGTTCTTCCAGAAGGTGCAGACAATTCGGCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
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| CDS GCA 90 bp | TGGAAGAACTCGTCGTCCGGGCTGCCCAACCGGGCAGCACCTGAGTaGACCACCAGCGCGACTCGAACCTCATCTTCATCGTCTGAGATG | + |
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Preference number: 5 (lower is better) Translates to: WKNSSSGLPNRAAPE*TTSATRTSSSSSEM Trigger: CATCTCAGACGATGAAGATGAGGTTCGAGTCGCGCTGGTGGTGCACTCAGGTGCTGCCCGGTTGGGCAGCCCGGACGACGAGTTCTTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 ENSMUST00000156537.8 |
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| CDS-3UTR CAA 90 bp | CCTCTGCACAAGGTCCAGTGTGCGGACGGGTTCAGTTGGAGGCCTGCCCCACCTTATCTTGACGTGCTCTaGCCCACGTTCCACGTAGTC | + |
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Preference number: 5 (lower is better) Translates to: PLHKVQCADGFSWRPAPPYLDVL*PTFHVV Trigger: GACTACGTGGAACGTGGGCAAGAGCACGTCAAGATA...AGGTGGGGCAGGCCTCCAACTGAACCCGTCCGCACACTGGACCTTGTGCAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
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| CDS-3UTR CAA 90 bp | GTTGGAGGCCTGCCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTCCCAATGCCTCTCTCCCCAGCTGTTaGATCTCCTCTCGCAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: VGGLPHLHKSWVSVSPNASLPSC*ISSRRF Trigger: GAACCTGCGAGAGGAGATCAAACAGCTGGGGAGAGA...GGCATTGGGAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
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| CDS-3UTR CAA 90 bp | GGGTTCAGTTGGAGGCCTGCCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTCCGACACCATTCCAGCATaGGTGATCTTCAGCTGCCTC | + |
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Preference number: 5 (lower is better) Translates to: GFSWRPAPPPQKLGLCLSDTIPA*VIFSCL Trigger: GAGGCAGCTGAAGATCACCAATGCTGGAATGGTGTC...GGAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAACTGAACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
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| CDS-3UTR CAA 90 bp | GGCCCTCTGCACAAGGTCCAGTGTGCGGACGGGTTCAGTTGGAGGCCTGCCCCATGCATTGAGTTGCACTaGTTGATGAGCTCGACAAAT | + |
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Preference number: 5 (lower is better) Translates to: GPLHKVQCADGFSWRPAPCIELH*LMSSTN Trigger: ATTTGTCGAGCTCATCAACAAGTGCAACTCAATGCA...TGGGGCAGGCCTCCAACTGAACCCGTCCGCACACTGGACCTTGTGCAGAGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
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| CDS-3UTR CAA 90 bp | TTGGAGGCCTGCCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTCCCAATGCCATCGGACTGCATTGAGTaGCACTTGTTGATGAGCTCG | + |
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Preference number: 5 (lower is better) Translates to: LEACPTSTKAGSLSLPMPSDCIE*HLLMSS Trigger: CGAGCTCATCAACAAGTGCAACTCAATGCAGTCCGA...TGGCATTGGGAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033075.14 |
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| CDS CCA 90 bp | TCCCCCTGCATCTCCACCTCCGTAGCTAGAAACGTAAAGATCTCATaGAGCTCTCGGATACTGCGCTCCAACTGCTGGATCTCACTGTGC | + |
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Preference number: 5 (lower is better) Translates to: SPCISTSVARNVKIS*SSRILRSNCWISLC Trigger: GCACAGTGAGATCCAGCAGTTGGAGCGCAGTATCCGAGAGCTCCATGAGATCTTTACGTTTCTAGCTACGGAGGTGGAGATGCAGGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
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| CDS-3UTR CAA 90 bp | GGGTTCAGTTGGAGGCCTGCCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTCCACTTTACTCTCCAGTTaGGCCATAGTCTGCCGAATT | + |
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Preference number: 5 (lower is better) Translates to: GFSWRPAPPPQKLGLCLSTLLSS*AIVCRI Trigger: AATTCGGCAGACTATGGCCAAACTGGAGAGTAAAGT...GGAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAACTGAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
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| CDS-3UTR CAA 90 bp | AAAACTGTCTCGCAGGCATTGTGGAGGACTCCAGGGGAGGACTCCATGAATGAGTCTCTCCCCAGCTGTTaGATCTCCTCTCGCAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: KTVSQALWRTPGEDSMNESLPSC*ISSRRF Trigger: GAACCTGCGAGAGGAGATCAAACAGCTGGGGAGAGA...CTCATTCATGGAGTCCTCCCCTGGAGTCCTCCACAATGCCTGCGAGACAGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
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| CDS GCA 90 bp | GCCGAGCTCAGGATGTTCTTCTCGATGCGGTTGATCATCTCCCCCTaGATCTCCACCTCCGTAGCTAGAAACGTAAAGATCTCATGGAGC | + |
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Preference number: 5 (lower is better) Translates to: AELRMFFSMRLIISP*ISTSVARNVKISWS Trigger: GCTCCATGAGATCTTTACGTTTCTAGCTACGGAGGTGGAGATGCAGGGGGAGATGATCAACCGCATCGAGAAGAACATCCTGAGCTCGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
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| CDS-3UTR CAA 90 bp | GGTTCAGTTGGAGGCCTGCCCCACCTCCACAAAAGCTGGGTCTCTGTCTCTCCCTGCATTGAGTTGCACTaGTTGATGAGCTCGACAAAT | + |
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Preference number: 5 (lower is better) Translates to: GSVGGLPHLHKSWVSVSPCIELH*LMSSTN Trigger: ATTTGTCGAGCTCATCAACAAGTGCAACTCAATGCA...GGGAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGGCCTCCAACTGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
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| CDS-3UTR CAA 90 bp | ATTGAAAACTGTCTCGCAGGCATTGTGGAGGACTCCAGGGGAGGACTCCATGAAGATGAGCTCGACAAATaGCTGGGACAGGACTCCATG | + |
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Preference number: 5 (lower is better) Translates to: IENCLAGIVEDSRGGLHEDELDK*LGQDSM Trigger: CATGGAGTCCTGTCCCAGCAATTTGTCGAGCTCATC...TTCATGGAGTCCTCCCCTGGAGTCCTCCACAATGCCTGCGAGACAGTTTTCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
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| CDS-3UTR CAA 90 bp | TTGAAAACTGTCTCGCAGGCATTGTGGAGGACTCCAGGGGAGGACTCCATGAATGACACCATTCCAGCATaGGTGATCTTCAGCTGCCTC | + |
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Preference number: 5 (lower is better) Translates to: LKTVSQALWRTPGEDSMNDTIPA*VIFSCL Trigger: GAGGCAGCTGAAGATCACCAATGCTGGAATGGTGTC...ATTCATGGAGTCCTCCCCTGGAGTCCTCCACAATGCCTGCGAGACAGTTTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
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| CDS-3UTR CAA 90 bp | ATTGAAAACTGTCTCGCAGGCATTGTGGAGGACTCCAGGGGAGGACTCCATGAATCGGACTGCATTGAGTaGCACTTGTTGATGAGCTCG | + |
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Preference number: 5 (lower is better) Translates to: IENCLAGIVEDSRGGLHESDCIE*HLLMSS Trigger: CGAGCTCATCAACAAGTGCAACTCAATGCAGTCCGA...TTCATGGAGTCCTCCCCTGGAGTCCTCCACAATGCCTGCGAGACAGTTTTCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
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| CDS-3UTR CAA 90 bp | CCCACCTCCACAAAAGCTGGGTCTCTGTCTCTCCCAATGCCAAGAACATGTGACACTTTACTCTCCAGTTaGGCCATAGTCTGCCGAATT | + |
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Preference number: 5 (lower is better) Translates to: PTSTKAGSLSLPMPRTCDTLLSS*AIVCRI Trigger: AATTCGGCAGACTATGGCCAAACTGGAGAGTAAAGT...GTCACATGTTCTTGGCATTGGGAGAGACAGAGACCCAGCTTTTGTGGAGGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033075.14 |
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| CDS TCA 72 bp | GAACTCGTCGTCCGGGCTGCCCAACCGGGCAGCACCTaGGTGCACCACCAGCGCGACTCGAACCTCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: ELVVRAAQPGST*VHHQRDSNLIF Trigger: GAAGATGAGGTTCGAGTCGCGCTGGTGGTGCACTCAGGTGCTGCCCGGTTGGGCAGCCCGGACGACGAGTTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 ENSMUST00000156537.8 |
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| CDS GCA 72 bp | TCGTCGTCCGGGCTGCCCAACCGGGCAGCACCTGAGTaGACCACCAGCGCGACTCGAACCTCATCTTCATCG | + |
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Preference number: 6 (lower is better) Translates to: SSSGLPNRAAPE*TTSATRTSSSS Trigger: CGATGAAGATGAGGTTCGAGTCGCGCTGGTGGTGCACTCAGGTGCTGCCCGGTTGGGCAGCCCGGACGACGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 ENSMUST00000156537.8 |
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| CDS GCA 72 bp | ACCAAGAGGGCTTCTGGAAGAACTCGTCGTCCGGGCTaGCCAACCGGGCAGCACCTGAGTGCACCACCAGCG | + |
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Preference number: 6 (lower is better) Translates to: TKRASGRTRRPG*PTGQHLSAPPA Trigger: CGCTGGTGGTGCACTCAGGTGCTGCCCGGTTGGGCAGCCCGGACGACGAGTTCTTCCAGAAGCCCTCTTGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156537.8 |
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| CDS GCA 72 bp | TTGTCTGCACCTTCTGGAAGAACTCGTCGTCCGGGCTaGCCAACCGGGCAGCACCTGAGTGCACCACCAGCG | + |
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Preference number: 6 (lower is better) Translates to: LSAPSGRTRRPG*PTGQHLSAPPA Trigger: CGCTGGTGGTGCACTCAGGTGCTGCCCGGTTGGGCAGCCCGGACGACGAGTTCTTCCAGAAGGTGCAGACAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
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| CDS TCA 72 bp | CACCACCAGCGCGACTCGAACCTCATCTTCATCGTCTaGGATGTTATCCCCCTGCCTCAACTCGTGGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: HHQRDSNLIFIV*DVIPLPQLVGP Trigger: AGGACCCACGAGTTGAGGCAGGGGGATAACATCTCAGACGATGAAGATGAGGTTCGAGTCGCGCTGGTGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 ENSMUST00000156537.8 |
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| CDS CAA 90 bp | ATGGTGACCTGCTGTTTCTCCAACTCCCGGACTTTACTCTCCAGTTaGGCCATAGTCTGCCGAATTGTCTGCACCTTCTGGAAGAACTCG | + |
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Preference number: 6 (lower is better) Translates to: MVTCCFSNSRTLLSS*AIVCRIVCTFWKNS Trigger: CGAGTTCTTCCAGAAGGTGCAGACAATTCGGCAGACTATGGCCAAACTGGAGAGTAAAGTCCGGGAGTTGGAGAAACAGCAGGTCACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
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| CDS CAA 72 bp | TGCTGTTTCTCCAACTCCCGGACTTTACTCTCCAGTTaGGCCATAGTCTGCCGAATTGTCTGCACCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: CCFSNSRTLLSS*AIVCRIVCTFW Trigger: CCAGAAGGTGCAGACAATTCGGCAGACTATGGCCAAACTGGAGAGTAAAGTCCGGGAGTTGGAGAAACAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
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| CDS GCA 72 bp | AGGATGTTCTTCTCGATGCGGTTGATCATCTCCCCCTaGATCTCCACCTCCGTAGCTAGAAACGTAAAGATC | + |
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Preference number: 6 (lower is better) Translates to: RMFFSMRLIISP*ISTSVARNVKI Trigger: GATCTTTACGTTTCTAGCTACGGAGGTGGAGATGCAGGGGGAGATGATCAACCGCATCGAGAAGAACATCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033075.14 ENSMUST00000121705.8 |
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