Pregenerated sensors for STX3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041488Ensembl transcript IDs: ENSMUST00000047698.14, ENSMUST00000069285.6, ENSMUST00000075304.14, ENSMUST00000211047.2, ENSMUST00000211641.2
Found 202 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGCCTCTTCACCACCATCCTGGCCTTCAGGCTGTGTGTGTGTTGTaGTCTAAACAGGGACCCGTTCGTTATGTCTCTCTACCATGCAGG | + |
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Preference number: 1 (lower is better) Translates to: LPLHHHPGLQAVCVL*SKQGPVRYVSLPCR Trigger: CCTGCATGGTAGAGAGACATAACGAACGGGTCCCTGTTTAGAGCACAACACACACACAGCCTGAAGGCCAGGATGGTGGTGAAGAGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
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| 3UTR TCA 90 bp | GGAGAGGACGGAGTGCTGGGACTTTCGTATCCGAAGGTCTGCAGATaGCCGAACCTCATCTTCCTCAATGTGCTTCTCCATGCTCTTCAG | + |
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Preference number: 1 (lower is better) Translates to: GEDGVLGLSYPKVCR*PNLIFLNVLLHALQ Trigger: CTGAAGAGCATGGAGAAGCACATTGAGGAAGATGAGGTTCGGTCATCTGCAGACCTTCGGATACGAAAGTCCCAGCACTCCGTCCTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
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| 3UTR CCA 90 bp | TTCAAACTCTGTTCCCGTCTGGAGACAAGAGTGGTCAGGCCAAGCTaGAGTGAAAGCTGGTTATTTCAGTGCAGCAGCCCCTTAGGCCAC | + |
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Preference number: 1 (lower is better) Translates to: FKLCSRLETRVVRPS*SESWLFQCSSPLGH Trigger: GTGGCCTAAGGGGCTGCTGCACTGAAATAACCAGCTTTCACTCCAGCTTGGCCTGACCACTCTTGTCTCCAGACGGGAACAGAGTTTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
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| 3UTR CCA 90 bp | GTACCCCCTCATTCTCAGGGAGGCCTTTCAAACTCTGTTCCCGTCTaGAGACAAGAGTGGTCAGGCCAAGCTGGAGTGAAAGCTGGTTAT | + |
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Preference number: 1 (lower is better) Translates to: VPPHSQGGLSNSVPV*RQEWSGQAGVKAGY Trigger: ATAACCAGCTTTCACTCCAGCTTGGCCTGACCACTCTTGTCTCCAGACGGGAACAGAGTTTGAAAGGCCTCCCTGAGAATGAGGGGGTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
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| 3UTR CCA 90 bp | TCTCAGGGAGGCCTTTCAAACTCTGTTCCCGTCTGGAGACAAGAGTaGTCAGGCCAAGCTGGAGTGAAAGCTGGTTATTTCAGTGCAGCA | + |
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Preference number: 1 (lower is better) Translates to: SQGGLSNSVPVWRQE*SGQAGVKAGYFSAA Trigger: TGCTGCACTGAAATAACCAGCTTTCACTCCAGCTTGGCCTGACCACTCTTGTCTCCAGACGGGAACAGAGTTTGAAAGGCCTCCCTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
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| 3UTR CCA 90 bp | GACATGGTGAGGCTGAAGCAGCAGCCTCGTCCCACTTTATCCCCTTaGCTTCCTTCCATTGTTCCAGATAACATGGTGTGCTTGTTTGGG | + |
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Preference number: 1 (lower is better) Translates to: DMVRLKQQPRPTLSP*LPSIVPDNMVCLFG Trigger: CCCAAACAAGCACACCATGTTATCTGGAACAATGGAAGGAAGCCAAGGGGATAAAGTGGGACGAGGCTGCTGCTTCAGCCTCACCATGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
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| 3UTR GCA 90 bp | ACTGAGTTCAGTATGACCCTGTTGAGTTGGGCATGTTGTAATGCCTaGCTCTTCACCACCATCCTGGCCTTCAGGCTGTGTGTGTGTTGT | + |
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Preference number: 1 (lower is better) Translates to: TEFSMTLLSWACCNA*LFTTILAFRLCVCC Trigger: ACAACACACACACAGCCTGAAGGCCAGGATGGTGGTGAAGAGGCAGGCATTACAACATGCCCAACTCAACAGGGTCATACTGAACTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
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| 3UTR CCA 90 bp | ACAAACAACAAAAGCCCTTCATATGTGGCATTTCAAACTTTCAGCTaGCCTGAAGGAGGAGAGAAAAGGCCTGCACTAAGGGTTGTTTCC | + |
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Preference number: 1 (lower is better) Translates to: TNNKSPSYVAFQTFS*PEGGEKRPALRVVS Trigger: GGAAACAACCCTTAGTGCAGGCCTTTTCTCTCCTCCTTCAGGCCAGCTGAAAGTTTGAAATGCCACATATGAAGGGCTTTTGTTGTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
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| 3UTR TCA 90 bp | TTGTTAGTTATTCCCCTACAAAGTATATTCCAGGAGAATACTCCATaGGGTAGAAATACAGTGCCTTGGCTTGTCTCACGGGGATTGTCC | + |
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Preference number: 1 (lower is better) Translates to: LLVIPLQSIFQENTP*GRNTVPWLVSRGLS Trigger: GGACAATCCCCGTGAGACAAGCCAAGGCACTGTATTTCTACCTCATGGAGTATTCTCCTGGAATATACTTTGTAGGGGAATAACTAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
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| 3UTR TCA 90 bp | ATCTCTCACATACATAATTACAAAAGTACACCTGGAACACACAAATaGCTGACATTTCCAGAGCCTGAGACTGTAGCACCTTGTCCCTGG | + |
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Preference number: 1 (lower is better) Translates to: ISHIHNYKSTPGTHK*LTFPEPETVAPCPW Trigger: CCAGGGACAAGGTGCTACAGTCTCAGGCTCTGGAAATGTCAGTCATTTGTGTGTTCCAGGTGTACTTTTGTAATTATGTATGTGAGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
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| 3UTR-3UTR CCA 90 bp | CCTAGCCGGAGTCAGTCCTGCCAGACATCACAGCCAAAGGGAGGAAGGCATCCCGTCTGGAGACAAGAGTaGTCAGGCCAAGCTGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: PSRSQSCQTSQPKGGRHPVWRQE*SGQAGV Trigger: CACTCCAGCTTGGCCTGACCACTCTTGTCTCCAGAC...GGGATGCCTTCCTCCCTTTGGCTGTGATGTCTGGCAGGACTGACTCCGGCTAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
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| 3UTR-3UTR TCA 90 bp | ATGGTGAGGCTGAAGCAGCAGCCTCGTCCCACTTTATCCCCTTGGCTTCCTTCCGAAAAGAGACATAGCTaGGGAAGACTGAGGGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: MVRLKQQPRPTLSPWLPSEKRHS*GRLRGD Trigger: GTCTCCCCTCAGTCTTCCTCAGCTATGTCTCTTTTC...GGAAGGAAGCCAAGGGGATAAAGTGGGACGAGGCTGCTGCTTCAGCCTCACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
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| 3UTR-3UTR GCA 90 bp | AGTATGACCCTGTTGAGTTGGGCATGTTGTAATGCCTGCCTCTTCACCACCATCCAAGCTGCCGTTGGATaGGCCCTTTGCTGCGTTCAC | + |
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Preference number: 2 (lower is better) Translates to: SMTLLSWACCNACLFTTIQAAVG*ALCCVH Trigger: GTGAACGCAGCAAAGGGCGCATCCAACGGCAGCTTG...GATGGTGGTGAAGAGGCAGGCATTACAACATGCCCAACTCAACAGGGTCATACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
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| 3UTR-3UTR TCA 90 bp | CCTAGCCGGAGTCAGTCCTGCCAGACATCACAGCCAAAGGGAGGAAGGCATCCCAGAGAAAAACCAATGTaGCCCACAATGAAGTTAGAG | + |
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Preference number: 2 (lower is better) Translates to: PSRSQSCQTSQPKGGRHPREKPM*PTMKLE Trigger: CTCTAACTTCATTGTGGGTCACATTGGTTTTTCTCT...GGGATGCCTTCCTCCCTTTGGCTGTGATGTCTGGCAGGACTGACTCCGGCTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
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| 3UTR-3UTR TCA 90 bp | ATGGTGAGGCTGAAGCAGCAGCCTCGTCCCACTTTATCCCCTTGGCTTCCTTCCACTATTCTTGGACCCTaGAAGAGGAAGCAGACATGT | + |
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Preference number: 2 (lower is better) Translates to: MVRLKQQPRPTLSPWLPSTILGP*KRKQTC Trigger: ACATGTCTGCTTCCTCTTTCAGGGTCCAAGAATAGT...GGAAGGAAGCCAAGGGGATAAAGTGGGACGAGGCTGCTGCTTCAGCCTCACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
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| 3UTR-3UTR GCA 90 bp | CCCTTCCTAGATCTGAAGCTAGCTAAGGAGGGGCATCTTGGCTCTCTGTCCCTTGCTGTGTGTGTGTTGTaGTCTAAACAGGGACCCGTT | + |
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Preference number: 2 (lower is better) Translates to: PFLDLKLAKEGHLGSLSLAVCVL*SKQGPV Trigger: AACGGGTCCCTGTTTAGAGCACAACACACACACAGC...AAGGGACAGAGAGCCAAGATGCCCCTCCTTAGCTAGCTTCAGATCTAGGAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
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| 3UTR-3UTR GCA 90 bp | AGGCTGAAGCAGCAGCCTCGTCCCACTTTATCCCCTTGGCTTCCTTCCATTGTTCCAGATAACATGGTGTaGTTGTTTGGGAGCTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: RLKQQPRPTLSPWLPSIVPDNMV*LFGSWV Trigger: GACCCAGCTCCCAAACAAGCACACCATGTTATCTGG...AACAATGGAAGGAAGCCAAGGGGATAAAGTGGGACGAGGCTGCTGCTTCAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
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| 3UTR-3UTR CCA 90 bp | CTGCCAGACATCACAGCCAAAGGGAGGAAGGCATCCCTGAGGCTCCATCTTGAAGTGGTCAGGCCAAGCTaGAGTGAAAGCTGGTTATTT | + |
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Preference number: 2 (lower is better) Translates to: LPDITAKGRKASLRLHLEVVRPS*SESWLF Trigger: AAATAACCAGCTTTCACTCCAGCTTGGCCTGACCAC...TTCAAGATGGAGCCTCAGGGATGCCTTCCTCCCTTTGGCTGTGATGTCTGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
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| 3UTR-3UTR CCA 90 bp | CATGGCGATGTCCATAAACATGTCATGGAGCTCCTTGATGCTGCTCTCCAGCCTATTTCAAGCTGCCGTTaGATGCGCCCTTTGCTGCGT | + |
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Preference number: 2 (lower is better) Translates to: HGDVHKHVMELLDAALQPISSCR*MRPLLR Trigger: ACGCAGCAAAGGGCGCATCCAACGGCAGCTTGAAAT...AGGCTGGAGAGCAGCATCAAGGAGCTCCATGACATGTTTATGGACATCGCCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
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| 3UTR-3UTR TCA 90 bp | TGGCACCACAGAGGTGGAAGATTGCAGATGCCCGTTGAGATCCCATCTTTTTCAGACCCTCAATCTCGCTaGGGGCTTGCTTGGAAATCT | + |
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Preference number: 2 (lower is better) Translates to: WHHRGGRLQMPVEIPSFSDPQSR*GLAWKS Trigger: AGATTTCCAAGCAAGCCCTCAGCGAGATTGAGGGTC...TGAAAAAGATGGGATCTCAACGGGCATCTGCAATCTTCCACCTCTGTGGTGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
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| 3UTR-3UTR TCA 90 bp | AGTATGACCCTGTTGAGTTGGGCATGTTGTAATGCCTGCCTCTTCACCACCATCTCAATCATGGCTCCCTaGTTTTCCACCAGCATGGCG | + |
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Preference number: 2 (lower is better) Translates to: SMTLLSWACCNACLFTTISIMAP*FSTSMA Trigger: CGCCATGCTGGTGGAAAATCAGGGAGCCATGATTGA...GATGGTGGTGAAGAGGCAGGCATTACAACATGCCCAACTCAACAGGGTCATACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
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| 3UTR-3UTR CCA 90 bp | AGTATGACCCTGTTGAGTTGGGCATGTTGTAATGCCTGCCTCTTCACCACCATCATGGCACCACAGAGGTaGAAGATTGCAGATGCCCGT | + |
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Preference number: 2 (lower is better) Translates to: SMTLLSWACCNACLFTTIMAPQR*KIADAR Trigger: ACGGGCATCTGCAATCTTCCACCTCTGTGGTGCCAT...GATGGTGGTGAAGAGGCAGGCATTACAACATGCCCAACTCAACAGGGTCATACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGAAGCAGCAGCCTCGTCCCACTTTATCCCCTTGGCTTCCTTCCATTGTTGAGGAAGCAGACATGTaGTTGGTTAAGAATGCGACC | + |
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Preference number: 2 (lower is better) Translates to: RLKQQPRPTLSPWLPSIVEEADM*LVKNAT Trigger: GGTCGCATTCTTAACCAACCACATGTCTGCTTCCTC...AACAATGGAAGGAAGCCAAGGGGATAAAGTGGGACGAGGCTGCTGCTTCAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
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| 3UTR-3UTR CCA 90 bp | CCCTTCCTAGATCTGAAGCTAGCTAAGGAGGGGCATCTTGGCTCTCTGTCCCTTCCCACTTTATCCCCTTaGCTTCCTTCCATTGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: PFLDLKLAKEGHLGSLSLPTLSP*LPSIVP Trigger: TGGAACAATGGAAGGAAGCCAAGGGGATAAAGTGGG...AAGGGACAGAGAGCCAAGATGCCCCTCCTTAGCTAGCTTCAGATCTAGGAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
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| 3UTR CAA 90 bp | GGGAGACATGATGGCACCACAGAGGTGGAAGATTGCAGATGCCCGTaGAGATCCCATCTTTTTCAGGCAAATATGCCCCCAATGGTAGAA | + |
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Preference number: 2 (lower is better) Translates to: GRHDGTTEVEDCRCP*RSHLFQANMPPMVE Trigger: TTCTACCATTGGGGGCATATTTGCCTGAAAAAGATGGGATCTCAACGGGCATCTGCAATCTTCCACCTCTGTGGTGCCATCATGTCTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
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| 3UTR CAA 90 bp | TACCATGATCTGAGAGACAGCCTCACTGAGTTCAGTATGACCCTGTaGAGTTGGGCATGTTGTAATGCCTGCCTCTTCACCACCATCCTG | + |
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Preference number: 2 (lower is better) Translates to: YHDLRDSLTEFSMTL*SWACCNACLFTTIL Trigger: CAGGATGGTGGTGAAGAGGCAGGCATTACAACATGCCCAACTCAACAGGGTCATACTGAACTCAGTGAGGCTGTCTCTCAGATCATGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
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| 3UTR-3UTR TCA 90 bp | CCCTTCCTAGATCTGAAGCTAGCTAAGGAGGGGCATCTTGGCTCTCTGTCCCTTCTTCACTCTGATACTTaGCCGCCTTTTTGGTATCTG | + |
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Preference number: 2 (lower is better) Translates to: PFLDLKLAKEGHLGSLSLLHSDT*PPFWYL Trigger: CAGATACCAAAAAGGCGGTCAAGTATCAGAGTGAAG...AAGGGACAGAGAGCCAAGATGCCCCTCCTTAGCTAGCTTCAGATCTAGGAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
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| 3UTR-3UTR CCA 90 bp | CCCTTCCTAGATCTGAAGCTAGCTAAGGAGGGGCATCTTGGCTCTCTGTCCCTTGCTTGCTTGGAAATCTaGGAGTCAATGATCCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: PFLDLKLAKEGHLGSLSLACLEI*ESMIPE Trigger: TTCTGGGATCATTGACTCCCAGATTTCCAAGCAAGC...AAGGGACAGAGAGCCAAGATGCCCCTCCTTAGCTAGCTTCAGATCTAGGAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
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| 3UTR-3UTR GCA 90 bp | CCTTGGCTTCCTTCCATTGTTCCAGATAACATGGTGTGCTTGTTTGGGAGCTGGCCATGTTGTTCTCAATaGGGTCAATCATGGCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: PWLPSIVPDNMVCLFGSWPCCSQ*GQSWLP Trigger: AGGGAGCCATGATTGACCGCATTGAGAACAACATGG...CCAGCTCCCAAACAAGCACACCATGTTATCTGGAACAATGGAAGGAAGCCAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
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| 3UTR-3UTR GCA 90 bp | CAGCAGCCTCGTCCCACTTTATCCCCTTGGCTTCCTTCCATTGTTCCAGATAACAAACCAACTGTATATTaGCGTGCTCCCTGTTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: QQPRPTLSPWLPSIVPDNKPTVY*RAPCSF Trigger: GAAGGAACAGGGAGCACGGCAATATACAGTTGGTTT...GTTATCTGGAACAATGGAAGGAAGCCAAGGGGATAAAGTGGGACGAGGCTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
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| 3UTR-3UTR CCA 90 bp | GGAGCTAGTGTATGTAGAGCACACACACACTGCTGGATAATTGAGGGTCCCATGCCCACTTTATCCCCTTaGCTTCCTTCCATTGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: GASVCRAHTHCWIIEGPMPTLSP*LPSIVP Trigger: TGGAACAATGGAAGGAAGCCAAGGGGATAAAGTGGG...CATGGGACCCTCAATTATCCAGCAGTGTGTGTGTGCTCTACATACACTAGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
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| 3UTR CAA 90 bp | TCCTCAATGTGCTTCTCCATGCTCTTCAGCTTGTTCCGGACGTTGTaGGCCCTTTTCTTGATCTCAGTTGTGAGCTGTTCAAGGTCATCT | + |
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Preference number: 2 (lower is better) Translates to: SSMCFSMLFSLFRTL*ALFLISVVSCSRSS Trigger: AGATGACCTTGAACAGCTCACAACTGAGATCAAGAAAAGGGCCAACAACGTCCGGAACAAGCTGAAGAGCATGGAGAAGCACATTGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
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| 3UTR CAA 90 bp | TCTTCCTCAATGTGCTTCTCCATGCTCTTCAGCTTGTTCCGGACGTaGTTGGCCCTTTTCTTGATCTCAGTTGTGAGCTGTTCAAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: SSSMCFSMLFSLFRT*LALFLISVVSCSRS Trigger: TGACCTTGAACAGCTCACAACTGAGATCAAGAAAAGGGCCAACAACGTCCGGAACAAGCTGAAGAGCATGGAGAAGCACATTGAGGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
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| 3UTR-3UTR TCA 90 bp | TGGGTTCAACAGATATTTATTAATGCCCAGCTGCCCATCTTCTGTCAGTCTCAGTGTCATGGAGCTCCTTaGTGCTGCTCTCCAGCCTTA | + |
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Preference number: 2 (lower is better) Translates to: WVQQIFINAQLPIFCQSQCHGAP*CCSPAL Trigger: TAAGGCTGGAGAGCAGCATCAAGGAGCTCCATGACA...CTGAGACTGACAGAAGATGGGCAGCTGGGCATTAATAAATATCTGTTGAACCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
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| 3UTR-3UTR TCA 90 bp | CAACAGATATTTATTAATGCCCAGCTGCCCATCTTCTGTCAGTCTCAGAAGGGAGGGAGTACCATGATCTaGGAGACAGCCTCACTGAGT | + |
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Preference number: 2 (lower is better) Translates to: QQIFINAQLPIFCQSQKGGSTMI*ETASLS Trigger: ACTCAGTGAGGCTGTCTCTCAGATCATGGTACTCCC...TCCCTTCTGAGACTGACAGAAGATGGGCAGCTGGGCATTAATAAATATCTGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
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| 3UTR-3UTR GCA 90 bp | CTGCCAGACATCACAGCCAAAGGGAGGAAGGCATCCCTGAGGCTCCATCTTGAACTAGCTGATTTTAGCTaGTGCTTACCTTTGTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: LPDITAKGRKASLRLHLELADFS*CLPLSF Trigger: AAAAGACAAAGGTAAGCAGCAGCTAAAATCAGCTAG...TTCAAGATGGAGCCTCAGGGATGCCTTCCTCCCTTTGGCTGTGATGTCTGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
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| 3UTR-3UTR GCA 90 bp | TGCCCAGCTGCCCATCTTCTGTCAGTCTCAGAAGGGAAAACATGGAATATGACACAATGTGCTTCTCCATaGTCTTCAGCTTGTTCCGGA | + |
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Preference number: 2 (lower is better) Translates to: CPAAHLLSVSEGKTWNMTQCASP*SSACSG Trigger: TCCGGAACAAGCTGAAGAGCATGGAGAAGCACATTG...TGTCATATTCCATGTTTTCCCTTCTGAGACTGACAGAAGATGGGCAGCTGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
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| 3UTR-3UTR GCA 90 bp | GCTGCCCATCTTCTGTCAGTCTCAGAAGGGAAAACATGGAATATGACAAGGAATCTTACGATGTCCTTGTaGCGACCCTCAATCTCGCTG | + |
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Preference number: 2 (lower is better) Translates to: AAHLLSVSEGKTWNMTRNLTMSL*RPSISL Trigger: CAGCGAGATTGAGGGTCGGCACAAGGACATCGTAAG...ATTCCTTGTCATATTCCATGTTTTCCCTTCTGAGACTGACAGAAGATGGGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
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| 3UTR-3UTR CCA 90 bp | TGGGTTCAACAGATATTTATTAATGCCCAGCTGCCCATCTTCTGTCAGTCTCAGATGGCACCACAGAGGTaGAAGATTGCAGATGCCCGT | + |
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Preference number: 2 (lower is better) Translates to: WVQQIFINAQLPIFCQSQMAPQR*KIADAR Trigger: ACGGGCATCTGCAATCTTCCACCTCTGTGGTGCCAT...CTGAGACTGACAGAAGATGGGCAGCTGGGCATTAATAAATATCTGTTGAACCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
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| 3UTR-3UTR CCA 90 bp | TGGGTTCAACAGATATTTATTAATGCCCAGCTGCCCATCTTCTGTCAGTCTCAGTCTTCACCACCATCCTaGCCTTCAGGCTGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: WVQQIFINAQLPIFCQSQSSPPS*PSGCVC Trigger: ACACACACAGCCTGAAGGCCAGGATGGTGGTGAAGA...CTGAGACTGACAGAAGATGGGCAGCTGGGCATTAATAAATATCTGTTGAACCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
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| 3UTR-3UTR CCA 90 bp | ATGGTGAGGCTGAAGCAGCAGCCTCGTCCCACTTTATCCCCTTGGCTTCCTTCCATTAAAAACTATTCTTaGACCCTGAAAGAGGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: MVRLKQQPRPTLSPWLPSIKNYS*TLKEEA Trigger: TGCTTCCTCTTTCAGGGTCCAAGAATAGTTTTTAAT...GGAAGGAAGCCAAGGGGATAAAGTGGGACGAGGCTGCTGCTTCAGCCTCACCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
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| 3UTR-3UTR TCA 90 bp | TGGGTTCAACAGATATTTATTAATGCCCAGCTGCCCATCTTCTGTCAGTCTCAGGAGAGACAGCCTCACTaGGTTCAGTATGACCCTGTT | + |
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Preference number: 2 (lower is better) Translates to: WVQQIFINAQLPIFCQSQERQPH*VQYDPV Trigger: AACAGGGTCATACTGAACTCAGTGAGGCTGTCTCTC...CTGAGACTGACAGAAGATGGGCAGCTGGGCATTAATAAATATCTGTTGAACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
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| 3UTR-3UTR GCA 90 bp | TGGGTTCAACAGATATTTATTAATGCCCAGCTGCCCATCTTCTGTCAGTCTCAGACAGAGGTGGAAGATTaGAGATGCCCGTTGAGATCC | + |
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Preference number: 2 (lower is better) Translates to: WVQQIFINAQLPIFCQSQTEVED*RCPLRS Trigger: GGATCTCAACGGGCATCTGCAATCTTCCACCTCTGT...CTGAGACTGACAGAAGATGGGCAGCTGGGCATTAATAAATATCTGTTGAACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
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| 3UTR-3UTR GCA 90 bp | CTTCTACATAAGCACCATCCCTCAAAACAGAACACTGTGACAGGTATGGTATGGGCATGTTGTAATGCCTaGCTCTTCACCACCATCCTG | + |
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Preference number: 2 (lower is better) Translates to: LLHKHHPSKQNTVTGMVWACCNA*LFTTIL Trigger: CAGGATGGTGGTGAAGAGGCAGGCATTACAACATGC...CCATACCATACCTGTCACAGTGTTCTGTTTTGAGGGATGGTGCTTATGTAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
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| 3UTR-3UTR CCA 90 bp | ACAAAGCATAACCTACACACCAACACACAGGGTTGCTTCACAGAGTCCAGAAGAAGCTGGAGTGAAAGCTaGTTATTTCAGTGCAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: TKHNLHTNTQGCFTESRRSWSES*LFQCSS Trigger: GCTGCTGCACTGAAATAACCAGCTTTCACTCCAGCT...TCTTCTGGACTCTGTGAAGCAACCCTGTGTGTTGGTGTGTAGGTTATGCTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| 3UTR-3UTR CCA 90 bp | CAGGCACTGTGTGCTAAGAGAAGGGACATGGTAGTATTCGAGATAGGCATAGTGTCCATAAACATGTCATaGAGCTCCTTGATGCTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: QALCAKRRDMVVFEIGIVSINMS*SSLMLL Trigger: GAGCAGCATCAAGGAGCTCCATGACATGTTTATGGA...CACTATGCCTATCTCGAATACTACCATGTCCCTTCTCTTAGCACACAGTGCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
||
| 3UTR-3UTR TCA 90 bp | ACAGTGACACTTGAGTTAGAAATGTGTTTGGACCAGTTTCTTGCACATTTCACTCCGAAGGTCTGCAGATaGCCGAACCTCATCTTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: TVTLELEMCLDQFLAHFTPKVCR*PNLIFL Trigger: GAGGAAGATGAGGTTCGGTCATCTGCAGACCTTCGG...AGTGAAATGTGCAAGAAACTGGTCCAAACACATTTCTAACTCAAGTGTCACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
||
| 3UTR-3UTR GCA 90 bp | CGATTTCCAGGCTATTGCCTCCATGATAAGAATTACAGGAGACAAAAGAAAGCAAGCTGGTTATTTCAGTaGAGCAGCCCCTTAGGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: RFPGYCLHDKNYRRQKKASWLFQ*SSPLGH Trigger: GTGGCCTAAGGGGCTGCTGCACTGAAATAACCAGCT...TGCTTTCTTTTGTCTCCTGTAATTCTTATCATGGAGGCAATAGCCTGGAAATCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| 3UTR-3UTR GCA 90 bp | CGATTTCCAGGCTATTGCCTCCATGATAAGAATTACAGGAGACAAAAGAAAGCAGAGGTAGAAATACAGTaGCTTGGCTTGTCTCACGGG | + |
|
Preference number: 2 (lower is better) Translates to: RFPGYCLHDKNYRRQKKAEVEIQ*LGLSHG Trigger: CCCGTGAGACAAGCCAAGGCACTGTATTTCTACCTC...TGCTTTCTTTTGTCTCCTGTAATTCTTATCATGGAGGCAATAGCCTGGAAATCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| 3UTR-3UTR CCA 90 bp | TGGGTTCAACAGATATTTATTAATGCCCAGCTGCCCATCTTCTGTCAGTCTCAGACAAAGCCCACTGACTaGTCCATGTTGTTCTCAATG | + |
|
Preference number: 2 (lower is better) Translates to: WVQQIFINAQLPIFCQSQTKPTD*SMLFSM Trigger: CATTGAGAACAACATGGACCAGTCAGTGGGCTTTGT...CTGAGACTGACAGAAGATGGGCAGCTGGGCATTAATAAATATCTGTTGAACCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
||
| 3UTR-3UTR GCA 90 bp | ACAGTGACACTTGAGTTAGAAATGTGTTTGGACCAGTTTCTTGCACATTTCACTACAGAGGTGGAAGATTaGAGATGCCCGTTGAGATCC | + |
|
Preference number: 2 (lower is better) Translates to: TVTLELEMCLDQFLAHFTTEVED*RCPLRS Trigger: GGATCTCAACGGGCATCTGCAATCTTCCACCTCTGT...AGTGAAATGTGCAAGAAACTGGTCCAAACACATTTCTAACTCAAGTGTCACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
||
| 3UTR-3UTR TCA 90 bp | AAGCAACAGATGGAGGTAAATATTACACACTATCTGCTATGCAGAAAACTTCGACAGGCCAAGCTGGAGTaGAAGCTGGTTATTTCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: KQQMEVNITHYLLCRKLRQAKLE*KLVISV Trigger: CACTGAAATAACCAGCTTTCACTCCAGCTTGGCCTG...TCGAAGTTTTCTGCATAGCAGATAGTGTGTAATATTTACCTCCATCTGTTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| 3UTR-3UTR GCA 90 bp | CTGTCAGTCTCAGAAGGGAAAACATGGAATATGACAAGGAATTTAGCAAAAGAAATCTCGCTGAGGGCTTaGTTGGAAATCTGGGAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: LSVSEGKTWNMTRNLAKEISLRA*LEIWES Trigger: TGACTCCCAGATTTCCAAGCAAGCCCTCAGCGAGAT...TTCTTTTGCTAAATTCCTTGTCATATTCCATGTTTTCCCTTCTGAGACTGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
||
| 3UTR-3UTR TCA 90 bp | CTGTCAGTCTCAGAAGGGAAAACATGGAATATGACAAGGAATTTAGCAAAAGAAAATGAACCTCCATCCTaGGACCAACTATCATCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: LSVSEGKTWNMTRNLAKENEPPS*DQLSSL Trigger: CAGAGATGATAGTTGGTCTCAGGATGGAGGTTCATT...TTCTTTTGCTAAATTCCTTGTCATATTCCATGTTTTCCCTTCTGAGACTGACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
||
| 3UTR-3UTR CCA 90 bp | CTTCTACATAAGCACCATCCCTCAAAACAGAACACTGTGACAGGTATGGTATGGATTAAAAACTATTCTTaGACCCTGAAAGAGGAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: LLHKHHPSKQNTVTGMVWIKNYS*TLKEEA Trigger: TGCTTCCTCTTTCAGGGTCCAAGAATAGTTTTTAAT...CCATACCATACCTGTCACAGTGTTCTGTTTTGAGGGATGGTGCTTATGTAGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
||
| 3UTR-3UTR CCA 90 bp | CGATTTCCAGGCTATTGCCTCCATGATAAGAATTACAGGAGACAAAAGAAAGCATTACAAAAGTACACCTaGAACACACAAATGACTGAC | + |
|
Preference number: 2 (lower is better) Translates to: RFPGYCLHDKNYRRQKKALQKYT*NTQMTD Trigger: GTCAGTCATTTGTGTGTTCCAGGTGTACTTTTGTAA...TGCTTTCTTTTGTCTCCTGTAATTCTTATCATGGAGGCAATAGCCTGGAAATCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| 3UTR CAA 90 bp | TTATTTTTAAAGTGGAACACAGTGACACTTGAGTTAGAAATGTGTTaGGACCAGTTTCTTGCACATTTCACTGACCTGCAGCCTATTCTA | + |
|
Preference number: 2 (lower is better) Translates to: LFLKWNTVTLELEMC*DQFLAHFTDLQPIL Trigger: TAGAATAGGCTGCAGGTCAGTGAAATGTGCAAGAAACTGGTCCAAACACATTTCTAACTCAAGTGTCACTGTGTTCCACTTTAAAAATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
||
| 3UTR GCA 72 bp | CTAAGGGTTGTTTCCCCTCCTAGCCGGAGTCAGTCCTaGCAGACATCACAGCCAAAGGGAGGAAGGCATCCC | + |
|
Preference number: 3 (lower is better) Translates to: LRVVSPPSRSQS*QTSQPKGGRHP Trigger: GGGATGCCTTCCTCCCTTTGGCTGTGATGTCTGGCAGGACTGACTCCGGCTAGGAGGGGAAACAACCCTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| 3UTR TCA 72 bp | CCGTCTGGAGACAAGAGTGGTCAGGCCAAGCTGGAGTaGAAGCTGGTTATTTCAGTGCAGCAGCCCCTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: PSGDKSGQAKLE*KLVISVQQPLR Trigger: CCTAAGGGGCTGCTGCACTGAAATAACCAGCTTTCACTCCAGCTTGGCCTGACCACTCTTGTCTCCAGACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTGAAGCAGCAGCCTCGTCCCACTTTATCCCCTTGGCTTCCTTCCATTGTTCAGGCTGTGTGTGTGTaGTGCTCTAAACAGGGACCC | + |
|
Preference number: 3 (lower is better) Translates to: RLKQQPRPTLSPWLPSIVQAVCV*CSKQGP Trigger: GGGTCCCTGTTTAGAGCACAACACACACACAGCCTG...AACAATGGAAGGAAGCCAAGGGGATAAAGTGGGACGAGGCTGCTGCTTCAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
||
| 3UTR-3UTR CAA 90 bp | CACCAGCATGGCGATGTCCATAAACATGTCATGGAGCTCCTTGATGCTGCTCTCTCCATGCTCTTCAGCTaGTTCCGGACGTTGTTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: HQHGDVHKHVMELLDAALSMLFS*FRTLLA Trigger: GGCCAACAACGTCCGGAACAAGCTGAAGAGCATGGA...GAGAGCAGCATCAAGGAGCTCCATGACATGTTTATGGACATCGCCATGCTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTGAAGCAGCAGCCTCGTCCCACTTTATCCCCTTGGCTTCCTTCCATTGTTGTGAAGATGGCTGGGTaGCCACTCTCCAACATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RLKQQPRPTLSPWLPSIVVKMAG*PLSNIS Trigger: AGAGATGTTGGAGAGTGGCAACCCAGCCATCTTCAC...AACAATGGAAGGAAGCCAAGGGGATAAAGTGGGACGAGGCTGCTGCTTCAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
||
| 3UTR GCA 72 bp | CACCACCATCCTGGCCTTCAGGCTGTGTGTGTGTTGTaGTCTAAACAGGGACCCGTTCGTTATGTCTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: HHHPGLQAVCVL*SKQGPVRYVSL Trigger: TAGAGAGACATAACGAACGGGTCCCTGTTTAGAGCACAACACACACACAGCCTGAAGGCCAGGATGGTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
||
| 3UTR CCA 72 bp | TCTGTTGTCTTCTTGCCAGTAATTTCAAGCTGCCGTTaGATGCGCCCTTTGCTGCGTTCACGGAAGTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: SVVFLPVISSCR*MRPLLRSRKST Trigger: GGTGGACTTCCGTGAACGCAGCAAAGGGCGCATCCAACGGCAGCTTGAAATTACTGGCAAGAAGACAACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
||
| 3UTR CCA 72 bp | AGGCTGAAGCAGCAGCCTCGTCCCACTTTATCCCCTTaGCTTCCTTCCATTGTTCCAGATAACATGGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: RLKQQPRPTLSP*LPSIVPDNMVC Trigger: GCACACCATGTTATCTGGAACAATGGAAGGAAGCCAAGGGGATAAAGTGGGACGAGGCTGCTGCTTCAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTCCTAGATCTGAAGCTAGCTAAGGAGGGGCATCTTGGCTCTCTGTCCCTTAGCTTGTTCCGGACGTaGTTGGCCCTTTTCTTGATC | + |
|
Preference number: 3 (lower is better) Translates to: PFLDLKLAKEGHLGSLSLSLFRT*LALFLI Trigger: GATCAAGAAAAGGGCCAACAACGTCCGGAACAAGCT...AAGGGACAGAGAGCCAAGATGCCCCTCCTTAGCTAGCTTCAGATCTAGGAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTCACGGGGATTGTCCAAGGCACAAAGCATAACCTACACACCAACACACAGTCTTCTGGGGGTAGATaGTTTGCTGAGCCAGGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: CLTGIVQGTKHNLHTNTQSSGGR*FAEPGP Trigger: TGGACCTGGCTCAGCAAACAATCTACCCCCAGAAGA...CTGTGTGTTGGTGTGTAGGTTATGCTTTGTGCCTTGGACAATCCCCGTGAGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| 3UTR-3UTR CAA 90 bp | ATAAACATGTCATGGAGCTCCTTGATGCTGCTCTCCAGCCTTACGATGTCCTTGAATTTCAAGCTGCCGTaGGATGCGCCCTTTGCTGCG | + |
|
Preference number: 3 (lower is better) Translates to: INMSWSSLMLLSSLTMSLNFKLP*DAPFAA Trigger: CGCAGCAAAGGGCGCATCCAACGGCAGCTTGAAATT...CAAGGACATCGTAAGGCTGGAGAGCAGCATCAAGGAGCTCCATGACATGTTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTCCTAGATCTGAAGCTAGCTAAGGAGGGGCATCTTGGCTCTCTGTCCCTTGTTTGGACCAGTTTCTaGCACATTTCACTGACCTGC | + |
|
Preference number: 3 (lower is better) Translates to: PFLDLKLAKEGHLGSLSLVWTSF*HISLTC Trigger: GCAGGTCAGTGAAATGTGCAAGAAACTGGTCCAAAC...AAGGGACAGAGAGCCAAGATGCCCCTCCTTAGCTAGCTTCAGATCTAGGAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
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| 3UTR GCA 72 bp | GGCACAAAGCATAACCTACACACCAACACACAGGGTTaGTTCACAGAGTCCAGAAGAGGGTACTTCAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GTKHNLHTNTQG*FTESRRGYFSC Trigger: GCAGCTGAAGTACCCTCTTCTGGACTCTGTGAAGCAACCCTGTGTGTTGGTGTGTAGGTTATGCTTTGTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| 3UTR GCA 72 bp | CCACAAAGCCCACTGACTGGTCCATGTTGTTCTCAATaGGGTCAATCATGGCTCCCTGATTTTCCACCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: PQSPLTGPCCSQ*GQSWLPDFPPA Trigger: TGCTGGTGGAAAATCAGGGAGCCATGATTGACCGCATTGAGAACAACATGGACCAGTCAGTGGGCTTTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
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| 3UTR CCA 72 bp | ACATTTCCAGAGCCTGAGACTGTAGCACCTTGTCCCTaGACCAGTTTTAAATCCCTGGTTCTGGTTGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: TFPEPETVAPCP*TSFKSLVLVGL Trigger: GAGGCCAACCAGAACCAGGGATTTAAAACTGGTCCAGGGACAAGGTGCTACAGTCTCAGGCTCTGGAAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| 3UTR-3UTR CAA 90 bp | TTGTGCTCTAAACAGGGACCCGTTCGTTATGTCTCTCTACCATGCAGGCCAGACTTGTTCCGGACGTTGTaGGCCCTTTTCTTGATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LCSKQGPVRYVSLPCRPDLFRTL*ALFLIS Trigger: TGAGATCAAGAAAAGGGCCAACAACGTCCGGAACAA...GTCTGGCCTGCATGGTAGAGAGACATAACGAACGGGTCCCTGTTTAGAGCACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
||
| 3UTR-3UTR CAA 90 bp | CATAAACATGTCATGGAGCTCCTTGATGCTGCTCTCCAGCCTTACGATGTCCTTTCGCTGAGGGCTTGCTaGGAAATCTGGGAGTCAATG | + |
|
Preference number: 3 (lower is better) Translates to: HKHVMELLDAALQPYDVLSLRAC*EIWESM Trigger: CATTGACTCCCAGATTTCCAAGCAAGCCCTCAGCGA...AAGGACATCGTAAGGCTGGAGAGCAGCATCAAGGAGCTCCATGACATGTTTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
||
| 3UTR CCA 72 bp | TTTTCCACCAGCATGGCGATGTCCATAAACATGTCATaGAGCTCCTTGATGCTGCTCTCCAGCCTTACGATG | + |
|
Preference number: 3 (lower is better) Translates to: FSTSMAMSINMS*SSLMLLSSLTM Trigger: CATCGTAAGGCTGGAGAGCAGCATCAAGGAGCTCCATGACATGTTTATGGACATCGCCATGCTGGTGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
||
| 3UTR-3UTR CAA 90 bp | AGTAAGCAGACATCTGAAAGTGGCAGGCACTGTGTGCTAAGAGAAGGGACATGGACTGACTGGTCCATGTaGTTCTCAATGCGGTCAATC | + |
|
Preference number: 3 (lower is better) Translates to: SKQTSESGRHCVLREGTWTDWSM*FSMRSI Trigger: GATTGACCGCATTGAGAACAACATGGACCAGTCAGT...CCATGTCCCTTCTCTTAGCACACAGTGCCTGCCACTTTCAGATGTCTGCTTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
||
| 3UTR-3UTR CAA 90 bp | ATGGTGAGGCTGAAGCAGCAGCCTCGTCCCACTTTATCCCCTTGGCTTCCTTCCTCATTTAATAAACAGTaGATTGGTGCCCTGTGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: MVRLKQQPRPTLSPWLPSSFNKQ*IGALCC Trigger: ACAACACAGGGCACCAATCAACTGTTTATTAAATGA...GGAAGGAAGCCAAGGGGATAAAGTGGGACGAGGCTGCTGCTTCAGCCTCACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
||
| 3UTR TCA 72 bp | ATCATGATCATGATCTTCTTCCTCCGGGCTTCACTCTaGTACTTGACCGCCTTTTTGGTATCTGCCACAGCC | + |
|
Preference number: 3 (lower is better) Translates to: IMIMIFFLRASL*YLTAFLVSATA Trigger: GGCTGTGGCAGATACCAAAAAGGCGGTCAAGTATCAGAGTGAAGCCCGGAGGAAGAAGATCATGATCATGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTACATAAGCACCATCCCTCAAAACAGAACACTGTGACAGGTATGGTATGGCACAGAGGTGGAAGATaGCAGATGCCCGTTGAGATC | + |
|
Preference number: 3 (lower is better) Translates to: LLHKHHPSKQNTVTGMVWHRGGR*QMPVEI Trigger: GATCTCAACGGGCATCTGCAATCTTCCACCTCTGTG...CCATACCATACCTGTCACAGTGTTCTGTTTTGAGGGATGGTGCTTATGTAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
||
| 3UTR CCA 72 bp | AAAAGCCCTTCATATGTGGCATTTCAAACTTTCAGCTaGCCTGAAGGAGGAGAGAAAAGGCCTGCACTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: KSPSYVAFQTFS*PEGGEKRPALR Trigger: CCTTAGTGCAGGCCTTTTCTCTCCTCCTTCAGGCCAGCTGAAAGTTTGAAATGCCACATATGAAGGGCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| 3UTR-3UTR CAA 90 bp | TTACACACTATCTGCTATGCAGAAAACTTCGATGGGAACCAATTTAGTCCTTACCTGGGGGTAGATTGTTaGCTGAGCCAGGTCCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LHTICYAENFDGNQFSPYLGVDC*LSQVQG Trigger: TCCTTGGACCTGGCTCAGCAAACAATCTACCCCCAG...GTAAGGACTAAATTGGTTCCCATCGAAGTTTTCTGCATAGCAGATAGTGTGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCTAGTGTATGTAGAGCACACACACACTGCTGGATAATTGAGGGTCCCATGTCATTTAATAAACAGTaGATTGGTGCCCTGTGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: GASVCRAHTHCWIIEGPMSFNKQ*IGALCC Trigger: ACAACACAGGGCACCAATCAACTGTTTATTAAATGA...CATGGGACCCTCAATTATCCAGCAGTGTGTGTGTGCTCTACATACACTAGCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTACATAAGCACCATCCCTCAAAACAGAACACTGTGACAGGTATGGTATGGTCATCTGTTGTCTTCTaGCCAGTAATTTCAAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LLHKHHPSKQNTVTGMVWSSVVF*PVISSC Trigger: GCAGCTTGAAATTACTGGCAAGAAGACAACAGATGA...CCATACCATACCTGTCACAGTGTTCTGTTTTGAGGGATGGTGCTTATGTAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
||
| 3UTR TCA 72 bp | TTCTACATAAGCACCATCCCTCAAAACAGAACACTGTaGCAGGTATGGTATGGTAATAGGGGTGTTGCCATA | + |
|
Preference number: 3 (lower is better) Translates to: FYISTIPQNRTL*QVWYGNRGVAI Trigger: TATGGCAACACCCCTATTACCATACCATACCTGTCACAGTGTTCTGTTTTGAGGGATGGTGCTTATGTAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
||
| 3UTR TCA 72 bp | ATACATAATTACAAAAGTACACCTGGAACACACAAATaGCTGACATTTCCAGAGCCTGAGACTGTAGCACCT | + |
|
Preference number: 3 (lower is better) Translates to: IHNYKSTPGTHK*LTFPEPETVAP Trigger: AGGTGCTACAGTCTCAGGCTCTGGAAATGTCAGTCATTTGTGTGTTCCAGGTGTACTTTTGTAATTATGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| 3UTR CCA 72 bp | AGATTACTACTCATCTATCCCATAGAAACATTAAATTaGGGGGTTATATACCCAAAATCCGGGATACTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: RLLLIYPIETLN*GVIYPKSGILA Trigger: TGCCAGTATCCCGGATTTTGGGTATATAACCCCCCAATTTAATGTTTCTATGGGATAGATGAGTAGTAATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| 3UTR CCA 72 bp | GCTTCATTTGTCCGTAACAAGAGTAATCAGTTTTTCTaGGGGAACCAGCATTCAAGTAAGTTAACACTTACT | + |
|
Preference number: 3 (lower is better) Translates to: ASFVRNKSNQFF*GNQHSSKLTLT Trigger: AGTAAGTGTTAACTTACTTGAATGCTGGTTCCCCCAGAAAAACTGATTACTCTTGTTACGGACAAATGAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
||
| 3UTR TCA 72 bp | AGAGTTAAAAGCCAAGCTCAAAGACTCATCCATGAATaGAATCAAAGCTTGACTATAAGTAAGCAGACATCT | + |
|
Preference number: 3 (lower is better) Translates to: RVKSQAQRLIHE*NQSLTISKQTS Trigger: AGATGTCTGCTTACTTATAGTCAAGCTTTGATTTCATTCATGGATGAGTCTTTGAGCTTGGCTTTTAACTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
||
| CDS-3UTR CCA 90 bp | ATGGTGAGGCTGAAGCAGCAGCCTCGTCCCACTTTATCCCCTTGGCTTCCTTCCCCTGCGTCAGCTGCTTaGCCTTCAGCTGCTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: MVRLKQQPRPTLSPWLPSPASAA*PSAAPA Trigger: GGCTGGAGCAGCTGAAGGCCAAGCAGCTGACGCAGG...GGAAGGAAGCCAAGGGGATAAAGTGGGACGAGGCTGCTGCTTCAGCCTCACCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
||
| CDS-3UTR CCA 90 bp | CCAGTAATTTCAAGCTGCCGTTGGATGCGCCCTTTGCTGCGTTCACGGAAGTCCCCTGCGTCAGCTGCTTaGCCTTCAGCTGCTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PVISSCRWMRPLLRSRKSPASAA*PSAAPA Trigger: GGCTGGAGCAGCTGAAGGCCAAGCAGCTGACGCAGG...GGACTTCCGTGAACGCAGCAAAGGGCGCATCCAACGGCAGCTTGAAATTACTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
||
| CDS-3UTR CCA 90 bp | CCAGAGCCTGAGACTGTAGCACCTTGTCCCTGGACCAGTTTTAAATCCCTGGTTCCTGCGTCAGCTGCTTaGCCTTCAGCTGCTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PEPETVAPCPWTSFKSLVPASAA*PSAAPA Trigger: GGCTGGAGCAGCTGAAGGCCAAGCAGCTGACGCAGG...AACCAGGGATTTAAAACTGGTCCAGGGACAAGGTGCTACAGTCTCAGGCTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| CDS-3UTR TCA 90 bp | CCTAGCCGGAGTCAGTCCTGCCAGACATCACAGCCAAAGGGAGGAAGGCATCCCAGAAGAACTCGTCCATaGAGGCTGTGTTGTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: PSRSQSCQTSQPKGGRHPRRTRP*RLCCQW Trigger: CCATTGACAACACAGCCTTCATGGACGAGTTCTTCT...GGGATGCCTTCCTCCCTTTGGCTGTGATGTCTGGCAGGACTGACTCCGGCTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| CDS-3UTR TCA 90 bp | ATGGTGAGGCTGAAGCAGCAGCCTCGTCCCACTTTATCCCCTTGGCTTCCTTCCCTCCGGGCTTCACTCTaGTACTTGACCGCCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: MVRLKQQPRPTLSPWLPSLRASL*YLTAFL Trigger: CAAAAAGGCGGTCAAGTATCAGAGTGAAGCCCGGAG...GGAAGGAAGCCAAGGGGATAAAGTGGGACGAGGCTGCTGCTTCAGCCTCACCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
||
| CDS-3UTR CCA 90 bp | CCTAGCCGGAGTCAGTCCTGCCAGACATCACAGCCAAAGGGAGGAAGGCATCCCGTCATCTTTGGTTTTTaGCTCTGGGATCGGTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSRSQSCQTSQPKGGRHPVIFGF*LWDRCR Trigger: TCTGCACCGATCCCAGAGCCAAAAACCAAAGATGAC...GGGATGCCTTCCTCCCTTTGGCTGTGATGTCTGGCAGGACTGACTCCGGCTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| CDS-3UTR GCA 90 bp | AGGGACCCGTTCGTTATGTCTCTCTACCATGCAGGCCAGACCTTTAAGGGCCATTCCGTGTCATCATCCTaGGTCAGCTGCTTGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RDPFVMSLYHAGQTFKGHSVSSS*VSCLAF Trigger: GAAGGCCAAGCAGCTGACGCAGGATGATGACACGGA...ATGGCCCTTAAAGGTCTGGCCTGCATGGTAGAGAGACATAACGAACGGGTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
||
| CDS-3UTR GCA 90 bp | CGGGGATTGTCCAAGGCACAAAGCATAACCTACACACCAACACACAGGGTTGCTCAAGCTGCCGTTGGATaGGCCCTTTGCTGCGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RGLSKAQSITYTPTHRVAQAAVG*ALCCVH Trigger: GTGAACGCAGCAAAGGGCGCATCCAACGGCAGCTTG...AGCAACCCTGTGTGTTGGTGTGTAGGTTATGCTTTGTGCCTTGGACAATCCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| CDS-3UTR TCA 90 bp | CGGGGATTGTCCAAGGCACAAAGCATAACCTACACACCAACACACAGGGTTGCTCCGAAGGTCTGCAGATaGCCGAACCTCATCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGLSKAQSITYTPTHRVAPKVCR*PNLIFL Trigger: GAGGAAGATGAGGTTCGGTCATCTGCAGACCTTCGG...AGCAACCCTGTGTGTTGGTGTGTAGGTTATGCTTTGTGCCTTGGACAATCCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| CDS-3UTR TCA 90 bp | AGGAAGACTGAGGGGAGACATGATGGCACCACAGAGGTGGAAGATTGCAGATGCGACCCTCAATCTCGCTaGGGGCTTGCTTGGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: RKTEGRHDGTTEVEDCRCDPQSR*GLAWKS Trigger: AGATTTCCAAGCAAGCCCTCAGCGAGATTGAGGGTC...GCATCTGCAATCTTCCACCTCTGTGGTGCCATCATGTCTCCCCTCAGTCTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
||
| CDS-3UTR TCA 90 bp | AGCCTATTCTACCACAGACATGGTGAGGCTGAAGCAGCAGCCTCGTCCCACTTTTGTCATGGAGCTCCTTaGTGCTGCTCTCCAGCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SLFYHRHGEAEAAASSHFCHGAP*CCSPAL Trigger: TAAGGCTGGAGAGCAGCATCAAGGAGCTCCATGACA...AAAGTGGGACGAGGCTGCTGCTTCAGCCTCACCATGTCTGTGGTAGAATAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
||
| CDS-3UTR GCA 90 bp | GCCACAGCCCGTTCCACAAAGCCCACTGACTGGTCCATGTTGTTCTCAATGCGGTGGCTCTGGGATCGGTaGAGAGAGAATGATACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ATARSTKPTDWSMLFSMRWLWDR*RENDTV Trigger: TACAGTATCATTCTCTCTGCACCGATCCCAGAGCCA...CCGCATTGAGAACAACATGGACCAGTCAGTGGGCTTTGTGGAACGGGCTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
||
| CDS-3UTR GCA 90 bp | ATGGTGAGGCTGAAGCAGCAGCCTCGTCCCACTTTATCCCCTTGGCTTCCTTCCCAATGTGCTTCTCCATaGTCTTCAGCTTGTTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: MVRLKQQPRPTLSPWLPSQCASP*SSACSG Trigger: TCCGGAACAAGCTGAAGAGCATGGAGAAGCACATTG...GGAAGGAAGCCAAGGGGATAAAGTGGGACGAGGCTGCTGCTTCAGCCTCACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
||
| CDS-3UTR GCA 90 bp | CTGAGAGACAGCCTCACTGAGTTCAGTATGACCCTGTTGAGTTGGGCATGTTGTGGATGCGCCCTTTGCTaGGTTCACGGAAGTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LRDSLTEFSMTLLSWACCGCALC*VHGSPP Trigger: AGGTGGACTTCCGTGAACGCAGCAAAGGGCGCATCC...ACAACATGCCCAACTCAACAGGGTCATACTGAACTCAGTGAGGCTGTCTCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
||
| CDS-3UTR GCA 90 bp | AGGGACCCGTTCGTTATGTCTCTCTACCATGCAGGCCAGACCTTTAAGGGCCATCTTACGATGTCCTTGTaGCGACCCTCAATCTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RDPFVMSLYHAGQTFKGHLTMSL*RPSISL Trigger: CAGCGAGATTGAGGGTCGGCACAAGGACATCGTAAG...ATGGCCCTTAAAGGTCTGGCCTGCATGGTAGAGAGACATAACGAACGGGTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
||
| CDS-3UTR TCA 90 bp | AGTAAGCAGACATCTGAAAGTGGCAGGCACTGTGTGCTAAGAGAAGGGACATGGCCGAAGGTCTGCAGATaGCCGAACCTCATCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKQTSESGRHCVLREGTWPKVCR*PNLIFL Trigger: GAGGAAGATGAGGTTCGGTCATCTGCAGACCTTCGG...CCATGTCCCTTCTCTTAGCACACAGTGCCTGCCACTTTCAGATGTCTGCTTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
||
| CDS-3UTR TCA 90 bp | CGGGGATTGTCCAAGGCACAAAGCATAACCTACACACCAACACACAGGGTTGCTTGTCATGGAGCTCCTTaGTGCTGCTCTCCAGCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: RGLSKAQSITYTPTHRVACHGAP*CCSPAL Trigger: TAAGGCTGGAGAGCAGCATCAAGGAGCTCCATGACA...AGCAACCCTGTGTGTTGGTGTGTAGGTTATGCTTTGTGCCTTGGACAATCCCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| CDS-3UTR GCA 90 bp | CCTTGGCTTCCTTCCATTGTTCCAGATAACATGGTGTGCTTGTTTGGGAGCTGGTCCGTGTCATCATCCTaGGTCAGCTGCTTGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PWLPSIVPDNMVCLFGSWSVSSS*VSCLAF Trigger: GAAGGCCAAGCAGCTGACGCAGGATGATGACACGGA...CCAGCTCCCAAACAAGCACACCATGTTATCTGGAACAATGGAAGGAAGCCAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
||
| CDS-3UTR GCA 90 bp | AGGAAGACTGAGGGGAGACATGATGGCACCACAGAGGTGGAAGATTGCAGATGCCGCCTTTTTGGTATCTaGCACAGCCCGTTCCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: RKTEGRHDGTTEVEDCRCRLFGI*HSPFHK Trigger: TTTGTGGAACGGGCTGTGGCAGATACCAAAAAGGCG...GCATCTGCAATCTTCCACCTCTGTGGTGCCATCATGTCTCCCCTCAGTCTTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
||
| CDS-3UTR TCA 90 bp | AGGCTGAAGCAGCAGCCTCGTCCCACTTTATCCCCTTGGCTTCCTTCCATTGTTAGAAGAACTCGTCCATaGAGGCTGTGTTGTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: RLKQQPRPTLSPWLPSIVRRTRP*RLCCQW Trigger: CCATTGACAACACAGCCTTCATGGACGAGTTCTTCT...AACAATGGAAGGAAGCCAAGGGGATAAAGTGGGACGAGGCTGCTGCTTCAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
||
| CDS-3UTR TCA 90 bp | CAGAAGAGGGTACTTCAGCTGCTAGGATGGGAGGTGGTTTTGATGAGAACTCAGGACCCTCAATCTCGCTaGGGGCTTGCTTGGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: QKRVLQLLGWEVVLMRTQDPQSR*GLAWKS Trigger: AGATTTCCAAGCAAGCCCTCAGCGAGATTGAGGGTC...CTGAGTTCTCATCAAAACCACCTCCCATCCTAGCAGCTGAAGTACCCTCTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| CDS-3UTR GCA 90 bp | TGTCTCACGGGGATTGTCCAAGGCACAAAGCATAACCTACACACCAACACACAGCTTACGATGTCCTTGTaGCGACCCTCAATCTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CLTGIVQGTKHNLHTNTQLTMSL*RPSISL Trigger: CAGCGAGATTGAGGGTCGGCACAAGGACATCGTAAG...CTGTGTGTTGGTGTGTAGGTTATGCTTTGTGCCTTGGACAATCCCCGTGAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| CDS-3UTR CCA 90 bp | AGGGACCCGTTCGTTATGTCTCTCTACCATGCAGGCCAGACCTTTAAGGGCCATGTCATCTTTGGTTTTTaGCTCTGGGATCGGTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RDPFVMSLYHAGQTFKGHVIFGF*LWDRCR Trigger: TCTGCACCGATCCCAGAGCCAAAAACCAAAGATGAC...ATGGCCCTTAAAGGTCTGGCCTGCATGGTAGAGAGACATAACGAACGGGTCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
||
| CDS-3UTR CCA 90 bp | CAGAAGAGGGTACTTCAGCTGCTAGGATGGGAGGTGGTTTTGATGAGAACTCAGATTTCAAGCTGCCGTTaGATGCGCCCTTTGCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: QKRVLQLLGWEVVLMRTQISSCR*MRPLLR Trigger: ACGCAGCAAAGGGCGCATCCAACGGCAGCTTGAAAT...CTGAGTTCTCATCAAAACCACCTCCCATCCTAGCAGCTGAAGTACCCTCTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| CDS-3UTR CCA 90 bp | AGTAAGCAGACATCTGAAAGTGGCAGGCACTGTGTGCTAAGAGAAGGGACATGGATTTCAAGCTGCCGTTaGATGCGCCCTTTGCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SKQTSESGRHCVLREGTWISSCR*MRPLLR Trigger: ACGCAGCAAAGGGCGCATCCAACGGCAGCTTGAAAT...CCATGTCCCTTCTCTTAGCACACAGTGCCTGCCACTTTCAGATGTCTGCTTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
||
| 3UTR CAA 72 bp | ATCTGTTGTCTTCTTGCCAGTAATTTCAAGCTGCCGTaGGATGCGCCCTTTGCTGCGTTCACGGAAGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ICCLLASNFKLP*DAPFAAFTEVH Trigger: GTGGACTTCCGTGAACGCAGCAAAGGGCGCATCCAACGGCAGCTTGAAATTACTGGCAAGAAGACAACAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
||
| 3UTR CAA 72 bp | GATGGCACCACAGAGGTGGAAGATTGCAGATGCCCGTaGAGATCCCATCTTTTTCAGGCAAATATGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DGTTEVEDCRCP*RSHLFQANMPP Trigger: TGGGGGCATATTTGCCTGAAAAAGATGGGATCTCAACGGGCATCTGCAATCTTCCACCTCTGTGGTGCCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
||
| 3UTR CAA 72 bp | CTGAGAGACAGCCTCACTGAGTTCAGTATGACCCTGTaGAGTTGGGCATGTTGTAATGCCTGCCTCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: LRDSLTEFSMTL*SWACCNACLFT Trigger: GGTGAAGAGGCAGGCATTACAACATGCCCAACTCAACAGGGTCATACTGAACTCAGTGAGGCTGTCTCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
||
| CDS-3UTR TCA 90 bp | GGAGCTAGTGTATGTAGAGCACACACACACTGCTGGATAATTGAGGGTCCCATGTTCCACAAAGCCCACTaGCTGGTCCATGTTGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GASVCRAHTHCWIIEGPMFHKAH*LVHVVL Trigger: GAGAACAACATGGACCAGTCAGTGGGCTTTGTGGAA...CATGGGACCCTCAATTATCCAGCAGTGTGTGTGTGCTCTACATACACTAGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
||
| CDS-3UTR GCA 90 bp | GCTGCCCATCTTCTGTCAGTCTCAGAAGGGAAAACATGGAATATGACAAGGAATCAAGCTGCCGTTGGATaGGCCCTTTGCTGCGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AAHLLSVSEGKTWNMTRNQAAVG*ALCCVH Trigger: GTGAACGCAGCAAAGGGCGCATCCAACGGCAGCTTG...ATTCCTTGTCATATTCCATGTTTTCCCTTCTGAGACTGACAGAAGATGGGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
||
| CDS-3UTR GCA 90 bp | TGTCTCACGGGGATTGTCCAAGGCACAAAGCATAACCTACACACCAACACACAGATCTCGCTGAGGGCTTaGTTGGAAATCTGGGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CLTGIVQGTKHNLHTNTQISLRA*LEIWES Trigger: TGACTCCCAGATTTCCAAGCAAGCCCTCAGCGAGAT...CTGTGTGTTGGTGTGTAGGTTATGCTTTGTGCCTTGGACAATCCCCGTGAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| CDS-3UTR CCA 90 bp | CAGAAGAGGGTACTTCAGCTGCTAGGATGGGAGGTGGTTTTGATGAGAACTCAGAGGCTGTGTTGTCAATaGCAATCTCAACCTCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QKRVLQLLGWEVVLMRTQRLCCQ*QSQPRP Trigger: CGGACGAGGTTGAGATTGCCATTGACAACACAGCCT...CTGAGTTCTCATCAAAACCACCTCCCATCCTAGCAGCTGAAGTACCCTCTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| CDS-3UTR CCA 90 bp | CAAGAGTGGTCAGGCCAAGCTGGAGTGAAAGCTGGTTATTTCAGTGCAGCAGCCGCTTGCTTGGAAATCTaGGAGTCAATGATCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QEWSGQAGVKAGYFSAAAACLEI*ESMIPE Trigger: TTCTGGGATCATTGACTCCCAGATTTCCAAGCAAGC...GGCTGCTGCACTGAAATAACCAGCTTTCACTCCAGCTTGGCCTGACCACTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| 3UTR CAA 72 bp | AGCCTCGTCCCACTTTATCCCCTTGGCTTCCTTCCATaGTTCCAGATAACATGGTGTGCTTGTTTGGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLVPLYPLGFLP*FQITWCACLGA Trigger: AGCTCCCAAACAAGCACACCATGTTATCTGGAACAATGGAAGGAAGCCAAGGGGATAAAGTGGGACGAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
||
| CDS-3UTR TCA 90 bp | AGTATGACCCTGTTGAGTTGGGCATGTTGTAATGCCTGCCTCTTCACCACCATCAGAAGAACTCGTCCATaGAGGCTGTGTTGTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SMTLLSWACCNACLFTTIRRTRP*RLCCQW Trigger: CCATTGACAACACAGCCTTCATGGACGAGTTCTTCT...GATGGTGGTGAAGAGGCAGGCATTACAACATGCCCAACTCAACAGGGTCATACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
||
| CDS-3UTR TCA 90 bp | CGGGGATTGTCCAAGGCACAAAGCATAACCTACACACCAACACACAGGGTTGCTAGATCTTGTCAATGTTaGGCCGTGTTTCCTCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: RGLSKAQSITYTPTHRVARSCQC*AVFPRS Trigger: AGATCGAGGAAACACGGCTCAACATTGACAAGATCT...AGCAACCCTGTGTGTTGGTGTGTAGGTTATGCTTTGTGCCTTGGACAATCCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| CDS-3UTR CCA 90 bp | ATAAACATGTCATGGAGCTCCTTGATGCTGCTCTCCAGCCTTACGATGTCCTTGAGGCTGTGTTGTCAATaGCAATCTCAACCTCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: INMSWSSLMLLSSLTMSLRLCCQ*QSQPRP Trigger: CGGACGAGGTTGAGATTGCCATTGACAACACAGCCT...CAAGGACATCGTAAGGCTGGAGAGCAGCATCAAGGAGCTCCATGACATGTTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
||
| CDS-3UTR CCA 90 bp | GGAGCTAGTGTATGTAGAGCACACACACACTGCTGGATAATTGAGGGTCCCATGTGGAAGTTTTGGCTCTaGGATCGGTGCAGAGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GASVCRAHTHCWIIEGPMWKFWL*DRCREN Trigger: ATTCTCTCTGCACCGATCCCAGAGCCAAAACTTCCA...CATGGGACCCTCAATTATCCAGCAGTGTGTGTGTGCTCTACATACACTAGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
||
| CDS-3UTR CCA 90 bp | TTGTGCTCTAAACAGGGACCCGTTCGTTATGTCTCTCTACCATGCAGGCCAGACTTTGGTTTTTGGCTCTaGGATCGGTGCAGAGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LCSKQGPVRYVSLPCRPDFGFWL*DRCREN Trigger: ATTCTCTCTGCACCGATCCCAGAGCCAAAAACCAAA...GTCTGGCCTGCATGGTAGAGAGACATAACGAACGGGTCCCTGTTTAGAGCACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
||
| CDS-3UTR CCA 90 bp | ACAAAGCATAACCTACACACCAACACACAGGGTTGCTTCACAGAGTCCAGAAGACGTGCCTTCTCCACATaGTCCACTGTGTGCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: TKHNLHTNTQGCFTESRRRAFST*STVCMT Trigger: TGTCATGCACACAGTGGACCATGTGGAGAAGGCACG...TCTTCTGGACTCTGTGAAGCAACCCTGTGTGTTGGTGTGTAGGTTATGCTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| 3UTR CAA 72 bp | GGTAGAAATACAGTGCCTTGGCTTGTCTCACGGGGATaGTCCAAGGCACAAAGCATAACCTACACACCAACA | + |
|
Preference number: 4 (lower is better) Translates to: GRNTVPWLVSRG*SKAQSITYTPT Trigger: TGTTGGTGTGTAGGTTATGCTTTGTGCCTTGGACAATCCCCGTGAGACAAGCCAAGGCACTGTATTTCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| CDS-3UTR TCA 90 bp | TGTCTCACGGGGATTGTCCAAGGCACAAAGCATAACCTACACACCAACACACAGGGTCCACTGTGTGCATaGCATTCAACTCTATGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: CLTGIVQGTKHNLHTNTQGPLCA*HSTLCY Trigger: ATAACATAGAGTTGAATGTCATGCACACAGTGGACC...CTGTGTGTTGGTGTGTAGGTTATGCTTTGTGCCTTGGACAATCCCCGTGAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| CDS-3UTR GCA 90 bp | ACAAAGCATAACCTACACACCAACACACAGGGTTGCTTCACAGAGTCCAGAAGACAATGTGCTTCTCCATaGTCTTCAGCTTGTTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TKHNLHTNTQGCFTESRRQCASP*SSACSG Trigger: TCCGGAACAAGCTGAAGAGCATGGAGAAGCACATTG...TCTTCTGGACTCTGTGAAGCAACCCTGTGTGTTGGTGTGTAGGTTATGCTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| CDS-3UTR GCA 90 bp | TTACACACTATCTGCTATGCAGAAAACTTCGATGGGAACCAATTTAGTCCTTACGGATGCGCCCTTTGCTaGGTTCACGGAAGTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LHTICYAENFDGNQFSPYGCALC*VHGSPP Trigger: AGGTGGACTTCCGTGAACGCAGCAAAGGGCGCATCC...GTAAGGACTAAATTGGTTCCCATCGAAGTTTTCTGCATAGCAGATAGTGTGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| CDS-3UTR GCA 90 bp | TGTCTCACGGGGATTGTCCAAGGCACAAAGCATAACCTACACACCAACACACAGACATGGTCCACTGTGTaGATGACATTCAACTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: CLTGIVQGTKHNLHTNTQTWSTV*MTFNSM Trigger: CATAGAGTTGAATGTCATGCACACAGTGGACCATGT...CTGTGTGTTGGTGTGTAGGTTATGCTTTGTGCCTTGGACAATCCCCGTGAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| 3UTR CAA 72 bp | CTCTTCAGCTTGTTCCGGACGTTGTTGGCCCTTTTCTaGATCTCAGTTGTGAGCTGTTCAAGGTCATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LFSLFRTLLALF*ISVVSCSRSSL Trigger: CAAAGATGACCTTGAACAGCTCACAACTGAGATCAAGAAAAGGGCCAACAACGTCCGGAACAAGCTGAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
||
| CDS-3UTR TCA 90 bp | AAGTGGAACACAGTGACACTTGAGTTAGAAATGTGTTTGGACCAGTTTCTTGCATCAATCATGGCTCCCTaGTTTTCCACCAGCATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KWNTVTLELEMCLDQFLASIMAP*FSTSMA Trigger: CGCCATGCTGGTGGAAAATCAGGGAGCCATGATTGA...TGCAAGAAACTGGTCCAAACACATTTCTAACTCAAGTGTCACTGTGTTCCACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
||
| CDS-3UTR GCA 90 bp | TTACACACTATCTGCTATGCAGAAAACTTCGATGGGAACCAATTTAGTCCTTACTCCGTGTCATCATCCTaGGTCAGCTGCTTGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LHTICYAENFDGNQFSPYSVSSS*VSCLAF Trigger: GAAGGCCAAGCAGCTGACGCAGGATGATGACACGGA...GTAAGGACTAAATTGGTTCCCATCGAAGTTTTCTGCATAGCAGATAGTGTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| CDS-3UTR GCA 90 bp | TCAATACAAAGCCAGCTTCTACATAAGCACCATCCCTCAAAACAGAACACTGTGATCTCGCTGAGGGCTTaGTTGGAAATCTGGGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SIQSQLLHKHHPSKQNTVISLRA*LEIWES Trigger: TGACTCCCAGATTTCCAAGCAAGCCCTCAGCGAGAT...CACAGTGTTCTGTTTTGAGGGATGGTGCTTATGTAGAAGCTGGCTTTGTATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
||
| CDS-3UTR CCA 90 bp | ACAAAAGCCCTTCATATGTGGCATTTCAAACTTTCAGCTGGCCTGAAGGAGGAGTCCATAAACATGTCATaGAGCTCCTTGATGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TKALHMWHFKLSAGLKEESINMS*SSLMLL Trigger: GAGCAGCATCAAGGAGCTCCATGACATGTTTATGGA...CTCCTCCTTCAGGCCAGCTGAAAGTTTGAAATGCCACATATGAAGGGCTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| CDS-3UTR TCA 90 bp | CAACAGATATTTATTAATGCCCAGCTGCCCATCTTCTGTCAGTCTCAGAAGGGAAGATCTTGTCAATGTTaGGCCGTGTTTCCTCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: QQIFINAQLPIFCQSQKGRSCQC*AVFPRS Trigger: AGATCGAGGAAACACGGCTCAACATTGACAAGATCT...TCCCTTCTGAGACTGACAGAAGATGGGCAGCTGGGCATTAATAAATATCTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
||
| CDS-3UTR GCA 90 bp | TCAATACAAAGCCAGCTTCTACATAAGCACCATCCCTCAAAACAGAACACTGTGCCATGTTGTTCTCAATaGGGTCAATCATGGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SIQSQLLHKHHPSKQNTVPCCSQ*GQSWLP Trigger: AGGGAGCCATGATTGACCGCATTGAGAACAACATGG...CACAGTGTTCTGTTTTGAGGGATGGTGCTTATGTAGAAGCTGGCTTTGTATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
||
| CDS-3UTR CCA 90 bp | GCTGCCCATCTTCTGTCAGTCTCAGAAGGGAAAACATGGAATATGACAAGGAATGCTTGCTTGGAAATCTaGGAGTCAATGATCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AAHLLSVSEGKTWNMTRNACLEI*ESMIPE Trigger: TTCTGGGATCATTGACTCCCAGATTTCCAAGCAAGC...ATTCCTTGTCATATTCCATGTTTTCCCTTCTGAGACTGACAGAAGATGGGCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
||
| CDS-3UTR GCA 90 bp | CGATTTCCAGGCTATTGCCTCCATGATAAGAATTACAGGAGACAAAAGAAAGCATGGCTCTGGGATCGGTaGAGAGAGAATGATACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RFPGYCLHDKNYRRQKKAWLWDR*RENDTV Trigger: TACAGTATCATTCTCTCTGCACCGATCCCAGAGCCA...TGCTTTCTTTTGTCTCCTGTAATTCTTATCATGGAGGCAATAGCCTGGAAATCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
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| CDS-3UTR CCA 90 bp | TCAATACAAAGCCAGCTTCTACATAAGCACCATCCCTCAAAACAGAACACTGTGTCCATAAACATGTCATaGAGCTCCTTGATGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SIQSQLLHKHHPSKQNTVSINMS*SSLMLL Trigger: GAGCAGCATCAAGGAGCTCCATGACATGTTTATGGA...CACAGTGTTCTGTTTTGAGGGATGGTGCTTATGTAGAAGCTGGCTTTGTATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
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| 3UTR CAA 72 bp | AAGTGGAACACAGTGACACTTGAGTTAGAAATGTGTTaGGACCAGTTTCTTGCACATTTCACTGACCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KWNTVTLELEMC*DQFLAHFTDLQ Trigger: CTGCAGGTCAGTGAAATGTGCAAGAAACTGGTCCAAACACATTTCTAACTCAAGTGTCACTGTGTTCCACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
||
| CDS-3UTR TCA 90 bp | AAGTGGAACACAGTGACACTTGAGTTAGAAATGTGTTTGGACCAGTTTCTTGCACTTCACTCTGATACTTaGCCGCCTTTTTGGTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: KWNTVTLELEMCLDQFLALHSDT*PPFWYL Trigger: CAGATACCAAAAAGGCGGTCAAGTATCAGAGTGAAG...TGCAAGAAACTGGTCCAAACACATTTCTAACTCAAGTGTCACTGTGTTCCACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
||
| CDS-3UTR CCA 90 bp | AAGCAACAGATGGAGGTAAATATTACACACTATCTGCTATGCAGAAAACTTCGATTTGGTTTTTGGCTCTaGGATCGGTGCAGAGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KQQMEVNITHYLLCRKLRFGFWL*DRCREN Trigger: ATTCTCTCTGCACCGATCCCAGAGCCAAAAACCAAA...TCGAAGTTTTCTGCATAGCAGATAGTGTGTAATATTTACCTCCATCTGTTGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| CDS-3UTR CCA 90 bp | AAATTTATACCATCAATACAAAGCCAGCTTCTACATAAGCACCATCCCTCAAAAACAAAGCCCACTGACTaGTCCATGTTGTTCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: KFIPSIQSQLLHKHHPSKTKPTD*SMLFSM Trigger: CATTGAGAACAACATGGACCAGTCAGTGGGCTTTGT...TTTTGAGGGATGGTGCTTATGTAGAAGCTGGCTTTGTATTGATGGTATAAATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
||
| CDS-3UTR CAA 90 bp | CCTAGCCGGAGTCAGTCCTGCCAGACATCACAGCCAAAGGGAGGAAGGCATCCCTCGCTGAGGGCTTGCTaGGAAATCTGGGAGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: PSRSQSCQTSQPKGGRHPSLRAC*EIWESM Trigger: CATTGACTCCCAGATTTCCAAGCAAGCCCTCAGCGA...GGGATGCCTTCCTCCCTTTGGCTGTGATGTCTGGCAGGACTGACTCCGGCTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| CDS-3UTR CAA 90 bp | CCTAGCCGGAGTCAGTCCTGCCAGACATCACAGCCAAAGGGAGGAAGGCATCCCAGCTTGTTCCGGACGTaGTTGGCCCTTTTCTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: PSRSQSCQTSQPKGGRHPSLFRT*LALFLI Trigger: GATCAAGAAAAGGGCCAACAACGTCCGGAACAAGCT...GGGATGCCTTCCTCCCTTTGGCTGTGATGTCTGGCAGGACTGACTCCGGCTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| CDS-3UTR CAA 90 bp | TGGCACCACAGAGGTGGAAGATTGCAGATGCCCGTTGAGATCCCATCTTTTTCATCCTGCGTCAGCTGCTaGGCCTTCAGCTGCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WHHRGGRLQMPVEIPSFSSCVSC*AFSCSS Trigger: GCTGGAGCAGCTGAAGGCCAAGCAGCTGACGCAGGA...TGAAAAAGATGGGATCTCAACGGGCATCTGCAATCTTCCACCTCTGTGGTGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
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| CDS-3UTR CAA 90 bp | TGTCTCACGGGGATTGTCCAAGGCACAAAGCATAACCTACACACCAACACACAGTCCTGCGTCAGCTGCTaGGCCTTCAGCTGCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CLTGIVQGTKHNLHTNTQSCVSC*AFSCSS Trigger: GCTGGAGCAGCTGAAGGCCAAGCAGCTGACGCAGGA...CTGTGTGTTGGTGTGTAGGTTATGCTTTGTGCCTTGGACAATCCCCGTGAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
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| CDS-3UTR CAA 90 bp | AGGAAGACTGAGGGGAGACATGATGGCACCACAGAGGTGGAAGATTGCAGATGCTCCATGCTCTTCAGCTaGTTCCGGACGTTGTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RKTEGRHDGTTEVEDCRCSMLFS*FRTLLA Trigger: GGCCAACAACGTCCGGAACAAGCTGAAGAGCATGGA...GCATCTGCAATCTTCCACCTCTGTGGTGCCATCATGTCTCCCCTCAGTCTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
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| CDS-3UTR CAA 90 bp | CAAGAGTGGTCAGGCCAAGCTGGAGTGAAAGCTGGTTATTTCAGTGCAGCAGCCAATTTCAAGCTGCCGTaGGATGCGCCCTTTGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: QEWSGQAGVKAGYFSAAANFKLP*DAPFAA Trigger: CGCAGCAAAGGGCGCATCCAACGGCAGCTTGAAATT...GGCTGCTGCACTGAAATAACCAGCTTTCACTCCAGCTTGGCCTGACCACTCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| CDS-3UTR CAA 90 bp | ATGGTGAGGCTGAAGCAGCAGCCTCGTCCCACTTTATCCCCTTGGCTTCCTTCCTCCATGAAGGCTGTGTaGTCAATGGCAATCTCAACC | + |
|
Preference number: 5 (lower is better) Translates to: MVRLKQQPRPTLSPWLPSSMKAV*SMAIST Trigger: GGTTGAGATTGCCATTGACAACACAGCCTTCATGGA...GGAAGGAAGCCAAGGGGATAAAGTGGGACGAGGCTGCTGCTTCAGCCTCACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
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| CDS-3UTR CAA 90 bp | CAGCAGCCTCGTCCCACTTTATCCCCTTGGCTTCCTTCCATTGTTCCAGATAACGATTCCGTGGAAGTTTaGGCTCTGGGATCGGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QQPRPTLSPWLPSIVPDNDSVEV*ALGSVQ Trigger: CTGCACCGATCCCAGAGCCAAAACTTCCACGGAATC...GTTATCTGGAACAATGGAAGGAAGCCAAGGGGATAAAGTGGGACGAGGCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
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| CDS-3UTR CAA 90 bp | CGGGGATTGTCCAAGGCACAAAGCATAACCTACACACCAACACACAGGGTTGCTAGCCTTACGATGTCCTaGTGCCGACCCTCAATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RGLSKAQSITYTPTHRVASLTMS*CRPSIS Trigger: CGAGATTGAGGGTCGGCACAAGGACATCGTAAGGCT...AGCAACCCTGTGTGTTGGTGTGTAGGTTATGCTTTGTGCCTTGGACAATCCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
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| CDS-3UTR CAA 90 bp | TTGTGCTCTAAACAGGGACCCGTTCGTTATGTCTCTCTACCATGCAGGCCAGACGGTCATCTTTGGTTTTaGGCTCTGGGATCGGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LCSKQGPVRYVSLPCRPDGHLWF*ALGSVQ Trigger: CTGCACCGATCCCAGAGCCAAAAACCAAAGATGACC...GTCTGGCCTGCATGGTAGAGAGACATAACGAACGGGTCCCTGTTTAGAGCACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
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| CDS-3UTR CAA 90 bp | CTGCCAGACATCACAGCCAAAGGGAGGAAGGCATCCCTGAGGCTCCATCTTGAATTGTTCCGGACGTTGTaGGCCCTTTTCTTGATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LPDITAKGRKASLRLHLELFRTL*ALFLIS Trigger: TGAGATCAAGAAAAGGGCCAACAACGTCCGGAACAA...TTCAAGATGGAGCCTCAGGGATGCCTTCCTCCCTTTGGCTGTGATGTCTGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
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| CDS-3UTR CAA 90 bp | CCTTGGCTTCCTTCCATTGTTCCAGATAACATGGTGTGCTTGTTTGGGAGCTGGAATTTCAAGCTGCCGTaGGATGCGCCCTTTGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: PWLPSIVPDNMVCLFGSWNFKLP*DAPFAA Trigger: CGCAGCAAAGGGCGCATCCAACGGCAGCTTGAAATT...CCAGCTCCCAAACAAGCACACCATGTTATCTGGAACAATGGAAGGAAGCCAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
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| CDS-3UTR CAA 90 bp | CCAGAGCCTGAGACTGTAGCACCTTGTCCCTGGACCAGTTTTAAATCCCTGGTTGTGAAGATGGCTGGGTaGCCACTCTCCAACATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PEPETVAPCPWTSFKSLVVKMAG*PLSNIS Trigger: AGAGATGTTGGAGAGTGGCAACCCAGCCATCTTCAC...AACCAGGGATTTAAAACTGGTCCAGGGACAAGGTGCTACAGTCTCAGGCTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
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| CDS-3UTR CAA 90 bp | CCTTGGCTTCCTTCCATTGTTCCAGATAACATGGTGTGCTTGTTTGGGAGCTGGAGCCTTACGATGTCCTaGTGCCGACCCTCAATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PWLPSIVPDNMVCLFGSWSLTMS*CRPSIS Trigger: CGAGATTGAGGGTCGGCACAAGGACATCGTAAGGCT...CCAGCTCCCAAACAAGCACACCATGTTATCTGGAACAATGGAAGGAAGCCAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
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| CDS TCA 90 bp | GCTTCTCCATGCTCTTCAGCTTGTTCCGGACGTTGTTGGCCCATGTaGGCTCAATCTCAGGAGATAGGAGAGGATTCCGTGGAAGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ASPCSSACSGRCWPM*AQSQEIGEDSVEVL Trigger: CAAAACTTCCACGGAATCCTCTCCTATCTCCTGAGATTGAGCTCACATGGGCCAACAACGTCCGGAACAAGCTGAAGAGCATGGAGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211047.2 |
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| CDS-3UTR CAA 90 bp | CAAGAGTGGTCAGGCCAAGCTGGAGTGAAAGCTGGTTATTTCAGTGCAGCAGCCGAGATCTTGTCAATGTaGAGCCGTGTTTCCTCGATC | + |
|
Preference number: 5 (lower is better) Translates to: QEWSGQAGVKAGYFSAAAEILSM*SRVSSI Trigger: GATCGAGGAAACACGGCTCAACATTGACAAGATCTC...GGCTGCTGCACTGAAATAACCAGCTTTCACTCCAGCTTGGCCTGACCACTCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
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| CDS-3UTR CAA 90 bp | TGTCTCACGGGGATTGTCCAAGGCACAAAGCATAACCTACACACCAACACACAGGGTCATCTTTGGTTTTaGGCTCTGGGATCGGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CLTGIVQGTKHNLHTNTQGHLWF*ALGSVQ Trigger: CTGCACCGATCCCAGAGCCAAAAACCAAAGATGACC...CTGTGTGTTGGTGTGTAGGTTATGCTTTGTGCCTTGGACAATCCCCGTGAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
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| CDS-3UTR CAA 90 bp | TGTCTCACGGGGATTGTCCAAGGCACAAAGCATAACCTACACACCAACACACAGATGTCATGGAGCTCCTaGATGCTGCTCTCCAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: CLTGIVQGTKHNLHTNTQMSWSS*MLLSSL Trigger: AAGGCTGGAGAGCAGCATCAAGGAGCTCCATGACAT...CTGTGTGTTGGTGTGTAGGTTATGCTTTGTGCCTTGGACAATCCCCGTGAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
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| CDS-3UTR CAA 90 bp | AAGTGGAACACAGTGACACTTGAGTTAGAAATGTGTTTGGACCAGTTTCTTGCATCCTGCGTCAGCTGCTaGGCCTTCAGCTGCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KWNTVTLELEMCLDQFLASCVSC*AFSCSS Trigger: GCTGGAGCAGCTGAAGGCCAAGCAGCTGACGCAGGA...TGCAAGAAACTGGTCCAAACACATTTCTAACTCAAGTGTCACTGTGTTCCACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
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| CDS-3UTR CAA 90 bp | CATGGCGATGTCCATAAACATGTCATGGAGCTCCTTGATGCTGCTCTCCAGCCTGAGATCTTGTCAATGTaGAGCCGTGTTTCCTCGATC | + |
|
Preference number: 5 (lower is better) Translates to: HGDVHKHVMELLDAALQPEILSM*SRVSSI Trigger: GATCGAGGAAACACGGCTCAACATTGACAAGATCTC...AGGCTGGAGAGCAGCATCAAGGAGCTCCATGACATGTTTATGGACATCGCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047698.14 |
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| CDS-3UTR CAA 90 bp | CTGAGAGACAGCCTCACTGAGTTCAGTATGACCCTGTTGAGTTGGGCATGTTGTAGCTTGTTCCGGACGTaGTTGGCCCTTTTCTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: LRDSLTEFSMTLLSWACCSLFRT*LALFLI Trigger: GATCAAGAAAAGGGCCAACAACGTCCGGAACAAGCT...ACAACATGCCCAACTCAACAGGGTCATACTGAACTCAGTGAGGCTGTCTCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
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| CDS-3UTR CAA 90 bp | TGCCCAGCTGCCCATCTTCTGTCAGTCTCAGAAGGGAAAACATGGAATATGACAAATCTCGCTGAGGGCTaGCTTGGAAATCTGGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: CPAAHLLSVSEGKTWNMTNLAEG*LGNLGV Trigger: GACTCCCAGATTTCCAAGCAAGCCCTCAGCGAGATT...TGTCATATTCCATGTTTTCCCTTCTGAGACTGACAGAAGATGGGCAGCTGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
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| CDS-3UTR CAA 90 bp | CAGGCACTGTGTGCTAAGAGAAGGGACATGGTAGTATTCGAGATAGGCATAGTGTACTTGACCGCCTTTTaGGTATCTGCCACAGCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: QALCAKRRDMVVFEIGIVYLTAF*VSATAR Trigger: ACGGGCTGTGGCAGATACCAAAAAGGCGGTCAAGTA...CACTATGCCTATCTCGAATACTACCATGTCCCTTCTCTTAGCACACAGTGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
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| CDS TCA 90 bp | GATAGGAGAGGATTCCGTGGAAGTTCTCAGAGAAGAACTCGTCCATaGAGGCTGTGTTGTCAATGGCAATCTCAACCTCGTCCGTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: DRRGFRGSSQRRTRP*RLCCQWQSQPRPCH Trigger: ATGACACGGACGAGGTTGAGATTGCCATTGACAACACAGCCTTCATGGACGAGTTCTTCTCTGAGAACTTCCACGGAATCCTCTCCTATC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211641.2 |
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| CDS GCA 90 bp | CCGAGCCTGACCCTGATACTTCATGGCTCTTTTAGTTTCATCCCGTaGCTTCTCCACATGGTCCACTGTGTGCATGACATTCAACTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: PSLTLILHGSFSFIP*LLHMVHCVHDIQLY Trigger: ATAGAGTTGAATGTCATGCACACAGTGGACCATGTGGAGAAGGCACGGGATGAAACTAAAAGAGCCATGAAGTATCAGGGTCAGGCTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069285.6 ENSMUST00000211047.2 |
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| CDS-3UTR CAA 90 bp | CCTTGGCTTCCTTCCATTGTTCCAGATAACATGGTGTGCTTGTTTGGGAGCTGGGAGATCTTGTCAATGTaGAGCCGTGTTTCCTCGATC | + |
|
Preference number: 5 (lower is better) Translates to: PWLPSIVPDNMVCLFGSWEILSM*SRVSSI Trigger: GATCGAGGAAACACGGCTCAACATTGACAAGATCTC...CCAGCTCCCAAACAAGCACACCATGTTATCTGGAACAATGGAAGGAAGCCAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000075304.14 |
||
| CDS-3UTR CAA 90 bp | TTGTGCTCTAAACAGGGACCCGTTCGTTATGTCTCTCTACCATGCAGGCCAGACTTGTTGGCCCTTTTCTaGATCTCAGTTGTGAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LCSKQGPVRYVSLPCRPDLLALF*ISVVSC Trigger: ACAGCTCACAACTGAGATCAAGAAAAGGGCCAACAA...GTCTGGCCTGCATGGTAGAGAGACATAACGAACGGGTCCCTGTTTAGAGCACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
||
| CDS-3UTR CAA 90 bp | GGAGCTAGTGTATGTAGAGCACACACACACTGCTGGATAATTGAGGGTCCCATGTTGTTCCGGACGTTGTaGGCCCTTTTCTTGATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GASVCRAHTHCWIIEGPMLFRTL*ALFLIS Trigger: TGAGATCAAGAAAAGGGCCAACAACGTCCGGAACAA...CATGGGACCCTCAATTATCCAGCAGTGTGTGTGTGCTCTACATACACTAGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
||
| CDS-3UTR CAA 90 bp | ACAAAGCATAACCTACACACCAACACACAGGGTTGCTTCACAGAGTCCAGAAGAAATCTCGCTGAGGGCTaGCTTGGAAATCTGGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TKHNLHTNTQGCFTESRRNLAEG*LGNLGV Trigger: GACTCCCAGATTTCCAAGCAAGCCCTCAGCGAGATT...TCTTCTGGACTCTGTGAAGCAACCCTGTGTGTTGGTGTGTAGGTTATGCTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| CDS-3UTR CAA 90 bp | AGTATGACCCTGTTGAGTTGGGCATGTTGTAATGCCTGCCTCTTCACCACCATCACTGACTGGTCCATGTaGTTCTCAATGCGGTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: SMTLLSWACCNACLFTTITDWSM*FSMRSI Trigger: GATTGACCGCATTGAGAACAACATGGACCAGTCAGT...GATGGTGGTGAAGAGGCAGGCATTACAACATGCCCAACTCAACAGGGTCATACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
||
| CDS-3UTR CAA 90 bp | TTGTGCTCTAAACAGGGACCCGTTCGTTATGTCTCTCTACCATGCAGGCCAGACTCATCTGTTGTCTTCTaGCCAGTAATTTCAAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LCSKQGPVRYVSLPCRPDSSVVF*PVISSC Trigger: GCAGCTTGAAATTACTGGCAAGAAGACAACAGATGA...GTCTGGCCTGCATGGTAGAGAGACATAACGAACGGGTCCCTGTTTAGAGCACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
||
| CDS-3UTR CAA 90 bp | TGGGTTCAACAGATATTTATTAATGCCCAGCTGCCCATCTTCTGTCAGTCTCAGGTGAAGATGGCTGGGTaGCCACTCTCCAACATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: WVQQIFINAQLPIFCQSQVKMAG*PLSNIS Trigger: AGAGATGTTGGAGAGTGGCAACCCAGCCATCTTCAC...CTGAGACTGACAGAAGATGGGCAGCTGGGCATTAATAAATATCTGTTGAACCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
||
| CDS-3UTR CAA 90 bp | ACAAAAGCCCTTCATATGTGGCATTTCAAACTTTCAGCTGGCCTGAAGGAGGAGTCCATGAAGGCTGTGTaGTCAATGGCAATCTCAACC | + |
|
Preference number: 5 (lower is better) Translates to: TKALHMWHFKLSAGLKEESMKAV*SMAIST Trigger: GGTTGAGATTGCCATTGACAACACAGCCTTCATGGA...CTCCTCCTTCAGGCCAGCTGAAAGTTTGAAATGCCACATATGAAGGGCTTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| CDS-3UTR CAA 90 bp | CAGAAGAGGGTACTTCAGCTGCTAGGATGGGAGGTGGTTTTGATGAGAACTCAGTCATCTGTTGTCTTCTaGCCAGTAATTTCAAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QKRVLQLLGWEVVLMRTQSSVVF*PVISSC Trigger: GCAGCTTGAAATTACTGGCAAGAAGACAACAGATGA...CTGAGTTCTCATCAAAACCACCTCCCATCCTAGCAGCTGAAGTACCCTCTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
||
| CDS-3UTR CAA 90 bp | AACAGATATTTATTAATGCCCAGCTGCCCATCTTCTGTCAGTCTCAGAAGGGAAATGTCATGGAGCTCCTaGATGCTGCTCTCCAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: NRYLLMPSCPSSVSLRREMSWSS*MLLSSL Trigger: AAGGCTGGAGAGCAGCATCAAGGAGCTCCATGACAT...TTCCCTTCTGAGACTGACAGAAGATGGGCAGCTGGGCATTAATAAATATCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
||
| CDS GCA 90 bp | TGTGAGCTGTTCAAGGTCATCTTTGGTTTTTGGCTCTGGGATCGGTaGAGAGAGAATGATACTGTAGAGTTTCTTAGCTTCCTCTACATG | + |
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Preference number: 5 (lower is better) Translates to: CELFKVIFGFWLWDR*RENDTVEFLSFLYM Trigger: CATGTAGAGGAAGCTAAGAAACTCTACAGTATCATTCTCTCTGCACCGATCCCAGAGCCAAAAACCAAAGATGACCTTGAACAGCTCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069285.6 ENSMUST00000075304.14 |
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| CDS CCA 90 bp | GATCTCAGTTGTGAGCTGTTCAAGGTCATCTTTGGTTTTTGGCTCTaGGATCGGTGCAGAGAGAATGATACTGTAGAGTTTCTTAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: DLSCELFKVIFGFWL*DRCRENDTVEFLSF Trigger: GAAGCTAAGAAACTCTACAGTATCATTCTCTCTGCACCGATCCCAGAGCCAAAAACCAAAGATGACCTTGAACAGCTCACAACTGAGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069285.6 ENSMUST00000075304.14 |
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| CDS-3UTR CAA 90 bp | AAGCAACAGATGGAGGTAAATATTACACACTATCTGCTATGCAGAAAACTTCGATCCATGCTCTTCAGCTaGTTCCGGACGTTGTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: KQQMEVNITHYLLCRKLRSMLFS*FRTLLA Trigger: GGCCAACAACGTCCGGAACAAGCTGAAGAGCATGGA...TCGAAGTTTTCTGCATAGCAGATAGTGTGTAATATTTACCTCCATCTGTTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
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| CDS-3UTR CAA 90 bp | AAATTTATACCATCAATACAAAGCCAGCTTCTACATAAGCACCATCCCTCAAAATCGCTGAGGGCTTGCTaGGAAATCTGGGAGTCAATG | + |
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Preference number: 5 (lower is better) Translates to: KFIPSIQSQLLHKHHPSKSLRAC*EIWESM Trigger: CATTGACTCCCAGATTTCCAAGCAAGCCCTCAGCGA...TTTTGAGGGATGGTGCTTATGTAGAAGCTGGCTTTGTATTGATGGTATAAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075304.14 |
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| CDS-3UTR CAA 90 bp | TTACACACTATCTGCTATGCAGAAAACTTCGATGGGAACCAATTTAGTCCTTACTTGTTGGCCCTTTTCTaGATCTCAGTTGTGAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: LHTICYAENFDGNQFSPYLLALF*ISVVSC Trigger: ACAGCTCACAACTGAGATCAAGAAAAGGGCCAACAA...GTAAGGACTAAATTGGTTCCCATCGAAGTTTTCTGCATAGCAGATAGTGTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069285.6 |
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| CDS CAA 90 bp | CGTGTTTCCTCGATCTCAGAGAAGAACTCGTCCATGAAGGCTGTGTaGTCAATGGCAATCTCAACCTCGTCCGTGTCATCATCCTGCGTC | + |
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Preference number: 6 (lower is better) Translates to: RVSSISEKNSSMKAV*SMAISTSSVSSSCV Trigger: GACGCAGGATGATGACACGGACGAGGTTGAGATTGCCATTGACAACACAGCCTTCATGGACGAGTTCTTCTCTGAGATCGAGGAAACACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047698.14 ENSMUST00000069285.6 ENSMUST00000075304.14 ENSMUST00000211047.2 |
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| CDS CAA 72 bp | TGCTTCTCCATGCTCTTCAGCTTGTTCCGGACGTTGTaGGCCCATGTGAGCTCAATCTCAGGAGATAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: CFSMLFSLFRTL*AHVSSISGDRR Trigger: TCTCCTATCTCCTGAGATTGAGCTCACATGGGCCAACAACGTCCGGAACAAGCTGAAGAGCATGGAGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211047.2 |
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| CDS CAA 72 bp | ATGTGCTTCTCCATGCTCTTCAGCTTGTTCCGGACGTaGTTGGCCCATGTGAGCTCAATCTCAGGAGATAGG | + |
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Preference number: 6 (lower is better) Translates to: MCFSMLFSLFRT*LAHVSSISGDR Trigger: CCTATCTCCTGAGATTGAGCTCACATGGGCCAACAACGTCCGGAACAAGCTGAAGAGCATGGAGAAGCACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211047.2 |
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| CDS CAA 90 bp | ATTCCGTGGAAGTTCTCAGAGAAGAACTCGTCCATGAAGGCTGTGTaGTCAATGGCAATCTCAACCTCGTCCGTGTCATCATCCTGCGTC | + |
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Preference number: 6 (lower is better) Translates to: IPWKFSEKNSSMKAV*SMAISTSSVSSSCV Trigger: GACGCAGGATGATGACACGGACGAGGTTGAGATTGCCATTGACAACACAGCCTTCATGGACGAGTTCTTCTCTGAGAACTTCCACGGAAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211641.2 |
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| CDS TCA 72 bp | GCCGTGTTTCCTCGATCTCAGAGAAGAACTCGTCCATaGAGGCTGTGTTGTCAATGGCAATCTCAACCTCGT | + |
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Preference number: 6 (lower is better) Translates to: AVFPRSQRRTRP*RLCCQWQSQPR Trigger: ACGAGGTTGAGATTGCCATTGACAACACAGCCTTCATGGACGAGTTCTTCTCTGAGATCGAGGAAACACGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047698.14 ENSMUST00000069285.6 ENSMUST00000075304.14 ENSMUST00000211047.2 |
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| CDS TCA 72 bp | CATCCCGTGCCTTCTCCACATGGTCCACTGTGTGCATaGCATTCAACTCTATGTTATCTAACATCTCCCCCT | + |
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Preference number: 6 (lower is better) Translates to: HPVPSPHGPLCA*HSTLCYLTSPP Trigger: AGGGGGAGATGTTAGATAACATAGAGTTGAATGTCATGCACACAGTGGACCATGTGGAGAAGGCACGGGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069285.6 ENSMUST00000211047.2 |
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| CDS CAA 72 bp | TCGATCTCAGAGAAGAACTCGTCCATGAAGGCTGTGTaGTCAATGGCAATCTCAACCTCGTCCGTGTCATCA | + |
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Preference number: 6 (lower is better) Translates to: SISEKNSSMKAV*SMAISTSSVSS Trigger: TGATGACACGGACGAGGTTGAGATTGCCATTGACAACACAGCCTTCATGGACGAGTTCTTCTCTGAGATCGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047698.14 ENSMUST00000069285.6 ENSMUST00000075304.14 ENSMUST00000211047.2 |
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| CDS CAA 90 bp | TTCTCCATGCTCTTCAGCTTGTTCCGGACGTTGTTGGCCCTTTTCTaGATCTCAGTTGTGAGCTGTTCAAGGTCATCTTTGGTTTTTGGC | + |
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Preference number: 6 (lower is better) Translates to: FSMLFSLFRTLLALF*ISVVSCSRSSLVFG Trigger: GCCAAAAACCAAAGATGACCTTGAACAGCTCACAACTGAGATCAAGAAAAGGGCCAACAACGTCCGGAACAAGCTGAAGAGCATGGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069285.6 ENSMUST00000075304.14 |
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| CDS GCA 72 bp | GAGAGGATTCCGTGGAAGTTTTGGCTCTGGGATCGGTaGAGAGAGAATGATACTGTAGAGTTTCTTAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: ERIPWKFWLWDR*RENDTVEFLSF Trigger: GAAGCTAAGAAACTCTACAGTATCATTCTCTCTGCACCGATCCCAGAGCCAAAACTTCCACGGAATCCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047698.14 ENSMUST00000211047.2 |
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| CDS CAA 72 bp | AAGTTCTCAGAGAAGAACTCGTCCATGAAGGCTGTGTaGTCAATGGCAATCTCAACCTCGTCCGTGTCATCA | + |
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Preference number: 6 (lower is better) Translates to: KFSEKNSSMKAV*SMAISTSSVSS Trigger: TGATGACACGGACGAGGTTGAGATTGCCATTGACAACACAGCCTTCATGGACGAGTTCTTCTCTGAGAACTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211641.2 |
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| CDS CAA 90 bp | TTCTCCATGCTCTTCAGCTTGTTCCGGACGTTGTTGGCCCTTTTCTaGATCTCAGTTGTGAGCTGTTCAAGGTCATCTTTGGTTTCATGT | + |
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Preference number: 6 (lower is better) Translates to: FSMLFSLFRTLLALF*ISVVSCSRSSLVSC Trigger: ACATGAAACCAAAGATGACCTTGAACAGCTCACAACTGAGATCAAGAAAAGGGCCAACAACGTCCGGAACAAGCTGAAGAGCATGGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211641.2 |
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| CDS TCA 72 bp | AGTTGTGAGCTGTTCAAGGTCATCTTTGGTTTCATGTaGGCTCAATCTCAGGAGATAGGAGAGGATTCCGTG | + |
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Preference number: 6 (lower is better) Translates to: SCELFKVIFGFM*AQSQEIGEDSV Trigger: CACGGAATCCTCTCCTATCTCCTGAGATTGAGCTCACATGAAACCAAAGATGACCTTGAACAGCTCACAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211641.2 |
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| CDS CAA 72 bp | TTCTTGATCTCAGTTGTGAGCTGTTCAAGGTCATCTTaGGTTTTTGGCTCTGGGATCGGTGCAGAGAGAATG | + |
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Preference number: 6 (lower is better) Translates to: FLISVVSCSRSS*VFGSGIGAERM Trigger: CATTCTCTCTGCACCGATCCCAGAGCCAAAAACCAAAGATGACCTTGAACAGCTCACAACTGAGATCAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069285.6 ENSMUST00000075304.14 |
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| CDS CCA 72 bp | ATGGCTCTTTTAGTTTCATCCCGTGCCTTCTCCACATaGTCCACTGTGTGCATGACATTCAACTCTATGTTA | + |
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Preference number: 6 (lower is better) Translates to: MALLVSSRAFST*STVCMTFNSML Trigger: TAACATAGAGTTGAATGTCATGCACACAGTGGACCATGTGGAGAAGGCACGGGATGAAACTAAAAGAGCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069285.6 ENSMUST00000211047.2 |
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| CDS GCA 72 bp | TTCAAGGTCATCTTTGGTTTTTGGCTCTGGGATCGGTaGAGAGAGAATGATACTGTAGAGTTTCTTAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: FKVIFGFWLWDR*RENDTVEFLSF Trigger: GAAGCTAAGAAACTCTACAGTATCATTCTCTCTGCACCGATCCCAGAGCCAAAAACCAAAGATGACCTTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069285.6 ENSMUST00000075304.14 |
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