Pregenerated sensors for STX2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029428Ensembl transcript IDs: ENSMUST00000031378.14, ENSMUST00000100680.10, ENSMUST00000149877.2, ENSMUST00000195906.2
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCAAGGGCTCAGGCTGGACTGGAGGGACACCTGGCTGTGGGTGGTaGGAGCCTGGGTGGTACGCATGGTCTCTGCAGCTAAATCCGATG | + |
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Preference number: 1 (lower is better) Translates to: AKGSGWTGGTPGCGW*EPGWYAWSLQLNPM Trigger: CATCGGATTTAGCTGCAGAGACCATGCGTACCACCCAGGCTCCCACCACCCACAGCCAGGTGTCCCTCCAGTCCAGCCTGAGCCCTTGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR CCA 90 bp | ACTGCAGGCCAAGGGCTCAGGCTGGACTGGAGGGACACCTGGCTGTaGGTGGTGGGAGCCTGGGTGGTACGCATGGTCTCTGCAGCTAAA | + |
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Preference number: 1 (lower is better) Translates to: TAGQGLRLDWRDTWL*VVGAWVVRMVSAAK Trigger: TTTAGCTGCAGAGACCATGCGTACCACCCAGGCTCCCACCACCCACAGCCAGGTGTCCCTCCAGTCCAGCCTGAGCCCTTGGCCTGCAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR TCA 90 bp | CACTGGAAATCCAGATTCAGCTGCCTGCCTGGTCGAGAGGTCTCCTaGGCGCTCTGCGAGCACACTGCAGGCCAAGGGCTCAGGCTGGAC | + |
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Preference number: 1 (lower is better) Translates to: HWKSRFSCLPGREVS*ALCEHTAGQGLRLD Trigger: GTCCAGCCTGAGCCCTTGGCCTGCAGTGTGCTCGCAGAGCGCTCAGGAGACCTCTCGACCAGGCAGGCAGCTGAATCTGGATTTCCAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR CCA 90 bp | GGAGGGACACCTGGCTGTGGGTGGTGGGAGCCTGGGTGGTACGCATaGTCTCTGCAGCTAAATCCGATGGCACTGACTGATGCAGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: GGTPGCGWWEPGWYA*SLQLNPMALTDAER Trigger: CCTCTCTGCATCAGTCAGTGCCATCGGATTTAGCTGCAGAGACCATGCGTACCACCCAGGCTCCCACCACCCACAGCCAGGTGTCCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR CCA 90 bp | GGCTGGACTGGAGGGACACCTGGCTGTGGGTGGTGGGAGCCTGGGTaGTACGCATGGTCTCTGCAGCTAAATCCGATGGCACTGACTGAT | + |
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Preference number: 1 (lower is better) Translates to: GWTGGTPGCGWWEPG*YAWSLQLNPMALTD Trigger: ATCAGTCAGTGCCATCGGATTTAGCTGCAGAGACCATGCGTACCACCCAGGCTCCCACCACCCACAGCCAGGTGTCCCTCCAGTCCAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR CCA 90 bp | GAGGTTCACTCGTGGAAGGACAGGATGCTGACTAAGCTGCAGGTATaGTCGGAGTCACCGAGGACAAAGAGCTCTTGGGGTACGGTTGCT | + |
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Preference number: 1 (lower is better) Translates to: EVHSWKDRMLTKLQV*SESPRTKSSWGTVA Trigger: AGCAACCGTACCCCAAGAGCTCTTTGTCCTCGGTGACTCCGACCATACCTGCAGCTTAGTCAGCATCCTGTCCTTCCACGAGTGAACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031378.14 |
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| 3UTR CCA 90 bp | TGTTGTGAAATCTCTGTGGTGTCCTTGAGAGAGACCCAGGCTCTCTaGGCTGGCATGTCGCATCCACTGGGCTCGCGGTGTTTCATGGTA | + |
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Preference number: 1 (lower is better) Translates to: CCEISVVSLRETQAL*AGMSHPLGSRCFMV Trigger: TACCATGAAACACCGCGAGCCCAGTGGATGCGACATGCCAGCCCAGAGAGCCTGGGTCTCTCTCAAGGACACCACAGAGATTTCACAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR TCA 90 bp | CAGAGAGATGTATCTGGAGTGCTGACTCAGTCACCCACACACCCCTaGTTCACTGGAAATCCAGATTCAGCTGCCTGCCTGGTCGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: QRDVSGVLTQSPTHP*FTGNPDSAACLVER Trigger: CCTCTCGACCAGGCAGGCAGCTGAATCTGGATTTCCAGTGAATCAGGGGTGTGTGGGTGACTGAGTCAGCACTCCAGATACATCTCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR TCA 90 bp | CCGGCATGGCTACATCATATCCCACCAAGTGAGGCTGGGGTAGAGTaGGCACTCATCACAGTCAGCAGTTGGCAGAGTTCACTAGTCATG | + |
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Preference number: 1 (lower is better) Translates to: PAWLHHIPPSEAGVE*ALITVSSWQSSLVM Trigger: CATGACTAGTGAACTCTGCCAACTGCTGACTGTGATGAGTGCTCACTCTACCCCAGCCTCACTTGGTGGGATATGATGTAGCCATGCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR TCA 90 bp | GTAGCTCTCGGCACATGGGGTGTCAGACCAGGAGGTGTGAGGAGGTaGCAGTGTGGCACACTCACCACTGAAAGGATCATGGTTTTTAGA | + |
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Preference number: 1 (lower is better) Translates to: VALGTWGVRPGGVRR*QCGTLTTERIMVFR Trigger: TCTAAAAACCATGATCCTTTCAGTGGTGAGTGTGCCACACTGTCACCTCCTCACACCTCCTGGTCTGACACCCCATGTGCCGAGAGCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR TCA 90 bp | CTTCGTATCCGCAGATCCACTGAAGTTCGGTTCCCATTCTCGTCCTaGTCACAGCTCTGCTCAATAGACTTCAGCTTGCCCCGGATCCTG | + |
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Preference number: 1 (lower is better) Translates to: LRIRRSTEVRFPFSS*SQLCSIDFSLPRIL Trigger: CAGGATCCGGGGCAAGCTGAAGTCTATTGAGCAGAGCTGTGATCAGGACGAGAATGGGAACCGAACTTCAGTGGATCTGCGGATACGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195906.2 |
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| 3UTR CCA 90 bp | CTCTCTGGGCTGGCATGTCGCATCCACTGGGCTCGCGGTGTTTCATaGTACGAAACCTCTGCGGTGCTTTCTTCTTCATCACCAATAAAA | + |
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Preference number: 1 (lower is better) Translates to: LSGLACRIHWARGVS*YETSAVLSSSSPIK Trigger: TTTTATTGGTGATGAAGAAGAAAGCACCGCAGAGGTTTCGTACCATGAAACACCGCGAGCCCAGTGGATGCGACATGCCAGCCCAGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR GCA 90 bp | GGTATGGTCGGAGTCACCGAGGACAAAGAGCTCTTGGGGTACGGTTaGTATGACAATGCTGTTGCGAGAATAATTCCAAGGATCACAAGC | + |
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Preference number: 1 (lower is better) Translates to: GMVGVTEDKELLGYG*YDNAVARIIPRITS Trigger: GCTTGTGATCCTTGGAATTATTCTCGCAACAGCATTGTCATAGCAACCGTACCCCAAGAGCTCTTTGTCCTCGGTGACTCCGACCATACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031378.14 |
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| 3UTR TCA 90 bp | GGTCGGAGTCACCGAGGACAAAGAGCTCTTGGGGTACGGTTGCTATaGCAATGCTGTTGCGAGAATAATTCCAAGGATCACAAGCAAAGT | + |
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Preference number: 1 (lower is better) Translates to: GRSHRGQRALGVRLL*QCCCENNSKDHKQS Trigger: ACTTTGCTTGTGATCCTTGGAATTATTCTCGCAACAGCATTGTCATAGCAACCGTACCCCAAGAGCTCTTTGTCCTCGGTGACTCCGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031378.14 |
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| 3UTR TCA 90 bp | TTCAATCATTCCTATTTCAAAGCTACCAAGGCAAGGCCACTGTTGTaGAATCTCTGTGGTGTCCTTGAGAGAGACCCAGGCTCTCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: FNHSYFKATKARPLL*NLCGVLERDPGSLG Trigger: GCCCAGAGAGCCTGGGTCTCTCTCAAGGACACCACAGAGATTTCACAACAGTGGCCTTGCCTTGGTAGCTTTGAAATAGGAATGATTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR TCA 90 bp | CCAGCTCTTCTTTTATTTTTCCTTCTGGGTTTGGAGCAGACAGGATaGTGCTGTGGTTCTTCTTCACGTCTTCTACATGCTGAGCAATCC | + |
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Preference number: 1 (lower is better) Translates to: PALLLFFLLGLEQTG*CCGSSSRLLHAEQS Trigger: GGATTGCTCAGCATGTAGAAGACGTGAAGAAGAACCACAGCATCATCCTGTCTGCTCCAAACCCAGAAGGAAAAATAAAAGAAGAGCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195906.2 |
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| 3UTR CCA 90 bp | AAAGGATCATGGTTTTTAGATAGTTCAGTAGCACTTGCTCACACTTaGTGTTCTGACCCGGCATGGCTACATCATATCCCACCAAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: KGSWFLDSSVALAHT*CSDPAWLHHIPPSE Trigger: CTCACTTGGTGGGATATGATGTAGCCATGCCGGGTCAGAACACCAAGTGTGAGCAAGTGCTACTGAACTATCTAAAAACCATGATCCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR-3UTR TCA 90 bp | GCGCTCTGCGAGCACACTGCAGGCCAAGGGCTCAGGCTGGACTGGAGGGACACCCCCAGACAGGAAGTGTaGGCTCCCAGGCAAGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: ALCEHTAGQGLRLDWRDTPRQEV*APRQEG Trigger: CCCTTCTTGCCTGGGAGCTCACACTTCCTGTCTGGG...GGTGTCCCTCCAGTCCAGCCTGAGCCCTTGGCCTGCAGTGTGCTCGCAGAGCGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR-3UTR TCA 90 bp | GATTCAGCTGCCTGCCTGGTCGAGAGGTCTCCTGAGCGCTCTGCGAGCACACTGCCCAGGCAGGAAGTGTaGGCTCCCAGGAAGGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: DSAACLVERSPERSASTLPRQEV*APRKEV Trigger: CACTTCCTTCCTGGGAGCTCACACTTCCTGCCTGGG...CAGTGTGCTCGCAGAGCGCTCAGGAGACCTCTCGACCAGGCAGGCAGCTGAATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR-3UTR TCA 90 bp | GTGAGCTCCCAGACAGGAAGTGTGAGCTTCCAGGCAGGAAGGGTGAGCTCCCAGTCACCTTTGCCACCCTaGGGGAGAGGCAAGCACCCA | + |
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Preference number: 2 (lower is better) Translates to: VSSQTGSVSFQAGRVSSQSPLPP*GRGKHP Trigger: TGGGTGCTTGCCTCTCCCTCAGGGTGGCAAAGGTGA...CTGGGAGCTCACCCTTCCTGCCTGGAAGCTCACACTTCCTGTCTGGGAGCTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031378.14 |
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| 3UTR-3UTR TCA 90 bp | CTTCCAGGCAGGAAGGGTGAGCTCCCAGTTAGGAAGGGTGAGCTATCAGCCAGGGGAGGTGTGAGGAGGTaGCAGTGTGGCACACTCACC | + |
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Preference number: 2 (lower is better) Translates to: LPGRKGELPVRKGELSARGGVRR*QCGTLT Trigger: GGTGAGTGTGCCACACTGTCACCTCCTCACACCTCC...CCTGGCTGATAGCTCACCCTTCCTAACTGGGAGCTCACCCTTCCTGCCTGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR-3UTR CCA 90 bp | CCTGATTCACTGGAAATCCAGATTCAGCTGCCTGCCTGGTCGAGAGGTCTCCTGGCCAAGGGCTCAGGCTaGACTGGAGGGACACCTGGC | + |
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Preference number: 2 (lower is better) Translates to: PDSLEIQIQLPAWSRGLLAKGSG*TGGTPG Trigger: GCCAGGTGTCCCTCCAGTCCAGCCTGAGCCCTTGGC...CAGGAGACCTCTCGACCAGGCAGGCAGCTGAATCTGGATTTCCAGTGAATCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR-3UTR TCA 90 bp | CAGATTCAGCTGCCTGCCTGGTCGAGAGGTCTCCTGAGCGCTCTGCGAGCACACACTGTCGCCTTGCCTTaGGACTCCATCAGCTCACAT | + |
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Preference number: 2 (lower is better) Translates to: QIQLPAWSRGLLSALRAHTVALP*DSISSH Trigger: ATGTGAGCTGATGGAGTCTCAAGGCAAGGCGACAGT...GTGTGCTCGCAGAGCGCTCAGGAGACCTCTCGACCAGGCAGGCAGCTGAATCTG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR-3UTR CCA 90 bp | CCCCTGATTCACTGGAAATCCAGATTCAGCTGCCTGCCTGGTCGAGAGGTCTCCGAGACCCAGGCTCTCTaGGCTGGCATGTCGCATCCA | + |
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Preference number: 2 (lower is better) Translates to: PLIHWKSRFSCLPGREVSETQAL*AGMSHP Trigger: TGGATGCGACATGCCAGCCCAGAGAGCCTGGGTCTC...GGAGACCTCTCGACCAGGCAGGCAGCTGAATCTGGATTTCCAGTGAATCAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR-3UTR CCA 90 bp | GCGCTCTGCGAGCACACTGCAGGCCAAGGGCTCAGGCTGGACTGGAGGGACACCATCACAGTCAGCAGTTaGCAGAGTTCACTAGTCATG | + |
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Preference number: 2 (lower is better) Translates to: ALCEHTAGQGLRLDWRDTITVSS*QSSLVM Trigger: CATGACTAGTGAACTCTGCCAACTGCTGACTGTGAT...GGTGTCCCTCCAGTCCAGCCTGAGCCCTTGGCCTGCAGTGTGCTCGCAGAGCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR-3UTR GCA 90 bp | CCTGATTCACTGGAAATCCAGATTCAGCTGCCTGCCTGGTCGAGAGGTCTCCTGCACAGCCCAGCCTGCTaGAGTAGCTCTCGGCACATG | + |
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Preference number: 2 (lower is better) Translates to: PDSLEIQIQLPAWSRGLLHSPAC*SSSRHM Trigger: CATGTGCCGAGAGCTACTGCAGCAGGCTGGGCTGTG...CAGGAGACCTCTCGACCAGGCAGGCAGCTGAATCTGGATTTCCAGTGAATCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR-3UTR TCA 90 bp | GCACTACAGGCTAACTCTAGACCAGGACCCACAGCCCAGCCTGCTGCAGTAGCTGGAAGGACAGGATGCTaGCTAAGCTGCAGGTATGGT | + |
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Preference number: 2 (lower is better) Translates to: ALQANSRPGPTAQPAAVAGRTGC*LSCRYG Trigger: ACCATACCTGCAGCTTAGTCAGCATCCTGTCCTTCC...AGCTACTGCAGCAGGCTGGGCTGTGGGTCCTGGTCTAGAGTTAGCCTGTAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR-3UTR TCA 90 bp | CTTCCAGGCAGGAAGGGTGAGCTCCCAGTTAGGAAGGGTGAGCTATCAGCCAGGTCACACTTGGTGTTCTaGCCCGGCATGGCTACATCA | + |
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Preference number: 2 (lower is better) Translates to: LPGRKGELPVRKGELSARSHLVF*PGMATS Trigger: TGATGTAGCCATGCCGGGTCAGAACACCAAGTGTGA...CCTGGCTGATAGCTCACCCTTCCTAACTGGGAGCTCACCCTTCCTGCCTGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR-3UTR TCA 90 bp | AGAAGGGTGAGCTCCCAGACAGGAAGTGTGAGCTTCCAGGCAGGAAGGGTGAGCTCACACTTGGTGTTCTaGCCCGGCATGGCTACATCA | + |
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Preference number: 2 (lower is better) Translates to: RRVSSQTGSVSFQAGRVSSHLVF*PGMATS Trigger: TGATGTAGCCATGCCGGGTCAGAACACCAAGTGTGA...GCTCACCCTTCCTGCCTGGAAGCTCACACTTCCTGTCTGGGAGCTCACCCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR-3UTR GCA 90 bp | AGCTCCCAGACAGGAAGTGTGAGCTTCCAGGCAGGAAGGGTGAGCTCCCAGTTAGACGAACATCACCTTTaGCACCCTGAGGGAGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: SSQTGSVSFQAGRVSSQLDEHHL*HPEGEA Trigger: TGCCTCTCCCTCAGGGTGGCAAAGGTGATGTTCGTC...TAACTGGGAGCTCACCCTTCCTGCCTGGAAGCTCACACTTCCTGTCTGGGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031378.14 |
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| 3UTR-3UTR CCA 90 bp | CTCCGTGAGCTAACGTTCAAGGCTCTTCAGACCCTCACACTTCCTAGTCAGGGTGAGACCCAGGCTCTCTaGGCTGGCATGTCGCATCCA | + |
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Preference number: 2 (lower is better) Translates to: LRELTFKALQTLTLPSQGETQAL*AGMSHP Trigger: TGGATGCGACATGCCAGCCCAGAGAGCCTGGGTCTC...ACCCTGACTAGGAAGTGTGAGGGTCTGAAGAGCCTTGAACGTTAGCTCACGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR-3UTR TCA 90 bp | CTGACTGATGCAGAGAGGGTGAGCTGCAAAGGCCCAGGTTCATCTTCAGAGCTCTCTCTGTGGTGTCCTTaGGAGAGACCCAGGCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: LTDAERVSCKGPGSSSELSLWCP*ERPRLS Trigger: AGAGAGCCTGGGTCTCTCTCAAGGACACCACAGAGA...GAGCTCTGAAGATGAACCTGGGCCTTTGCAGCTCACCCTCTCTGCATCAGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR CAA 90 bp | CTTCAGGTGCCATCCAGGAGTGGCTATGTACCCGGGACCATTCTCTaGAGTTTAGTGAGCACCAAGTTTGCTCCATCGTCACTGTCGCCT | + |
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Preference number: 2 (lower is better) Translates to: LQVPSRSGYVPGTIL*SLVSTKFAPSSLSP Trigger: AGGCGACAGTGACGATGGAGCAAACTTGGTGCTCACTAAACTCAAGAGAATGGTCCCGGGTACATAGCCACTCCTGGATGGCACCTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR-3UTR TCA 90 bp | AGCTCCCAGACAGGAAGTGTGAGCTTCCAGGCAGGAAGGGTGAGCTCCCAGTTACTCCATCAGCTCACATaGACAAGGAAGAGTAACATG | + |
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Preference number: 2 (lower is better) Translates to: SSQTGSVSFQAGRVSSQLLHQLT*TRKSNM Trigger: CATGTTACTCTTCCTTGTTCATGTGAGCTGATGGAG...TAACTGGGAGCTCACCCTTCCTGCCTGGAAGCTCACACTTCCTGTCTGGGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR-3UTR GCA 90 bp | GCACTACAGGCTAACTCTAGACCAGGACCCACAGCCCAGCCTGCTGCAGTAGCTACAAGTGTAAACCAGTaGACAGCTTTATCCCACACT | + |
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Preference number: 2 (lower is better) Translates to: ALQANSRPGPTAQPAAVATSVNQ*TALSHT Trigger: AGTGTGGGATAAAGCTGTGCACTGGTTTACACTTGT...AGCTACTGCAGCAGGCTGGGCTGTGGGTCCTGGTCTAGAGTTAGCCTGTAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR-3UTR CCA 90 bp | AGCTATCAGCCAGGAGTGGCTGCACTACAGGCTAACTCTAGACCAGGACCCACAAGGACAAAGAGCTCTTaGGGTACGGTTGCTATGACA | + |
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Preference number: 2 (lower is better) Translates to: SYQPGVAALQANSRPGPTRTKSS*GTVAMT Trigger: TGTCATAGCAACCGTACCCCAAGAGCTCTTTGTCCT...TGTGGGTCCTGGTCTAGAGTTAGCCTGTAGTGCAGCCACTCCTGGCTGATAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031378.14 |
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| 3UTR-3UTR TCA 90 bp | CCCATTCTCGTCCTGATCACAGCTCTGCTCAATAGACTTCAGCTTGCCCCGGATTTGGAGCAGACAGGATaGTGCTGTGGTTCTTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: PILVLITALLNRLQLAPDLEQTG*CCGSSS Trigger: TGAAGAAGAACCACAGCATCATCCTGTCTGCTCCAA...ATCCGGGGCAAGCTGAAGTCTATTGAGCAGAGCTGTGATCAGGACGAGAATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195906.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGATTCACTGGAAATCCAGATTCAGCTGCCTGCCTGGTCGAGAGGTCTCCTGACGAAACCTCTGCGGTaGTTTCTTCTTCATCACCAA | + |
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Preference number: 2 (lower is better) Translates to: PDSLEIQIQLPAWSRGLLTKPLR*FLLHHQ Trigger: TTGGTGATGAAGAAGAAAGCACCGCAGAGGTTTCGT...CAGGAGACCTCTCGACCAGGCAGGCAGCTGAATCTGGATTTCCAGTGAATCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR-3UTR CCA 90 bp | CTGACTGATGCAGAGAGGGTGAGCTGCAAAGGCCCAGGTTCATCTTCAGAGCTCTTATCCCACACTTCATaGTTTCTTAGGAACTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LTDAERVSCKGPGSSSELLSHTS*FLRNSG Trigger: CCCAGAGTTCCTAAGAAACCATGAAGTGTGGGATAA...GAGCTCTGAAGATGAACCTGGGCCTTTGCAGCTCACCCTCTCTGCATCAGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR CAA 90 bp | GTCAGCAGTTGGCAGAGTTCACTAGTCATGGTATCCTTCACATACTaGGTCGCTGGGCCATCTATTCACAAGTGTAAACCAGTGCACAGC | + |
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Preference number: 2 (lower is better) Translates to: VSSWQSSLVMVSFTY*VAGPSIHKCKPVHS Trigger: GCTGTGCACTGGTTTACACTTGTGAATAGATGGCCCAGCGACCAAGTATGTGAAGGATACCATGACTAGTGAACTCTGCCAACTGCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR-3UTR CCA 90 bp | AGCTCCCAGACAGGAAGTGTGAGCTTCCAGGCAGGAAGGGTGAGCTCCCAGTTACCACTGAAAGGATCATaGTTTTTAGATAGTTCAGTA | + |
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Preference number: 2 (lower is better) Translates to: SSQTGSVSFQAGRVSSQLPLKGS*FLDSSV Trigger: TACTGAACTATCTAAAAACCATGATCCTTTCAGTGG...TAACTGGGAGCTCACCCTTCCTGCCTGGAAGCTCACACTTCCTGTCTGGGAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR-3UTR CCA 90 bp | CTGACTGATGCAGAGAGGGTGAGCTGCAAAGGCCCAGGTTCATCTTCAGAGCTCCCACTGAAAGGATCATaGTTTTTAGATAGTTCAGTA | + |
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Preference number: 2 (lower is better) Translates to: LTDAERVSCKGPGSSSELPLKGS*FLDSSV Trigger: TACTGAACTATCTAAAAACCATGATCCTTTCAGTGG...GAGCTCTGAAGATGAACCTGGGCCTTTGCAGCTCACCCTCTCTGCATCAGTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR-3UTR TCA 90 bp | ACAGTCAGCAGTTGGCAGAGTTCACTAGTCATGGTATCCTTCACATACTTGGTCCTCCATCAGCTCACATaGACAAGGAAGAGTAACATG | + |
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Preference number: 2 (lower is better) Translates to: TVSSWQSSLVMVSFTYLVLHQLT*TRKSNM Trigger: CATGTTACTCTTCCTTGTTCATGTGAGCTGATGGAG...GACCAAGTATGTGAAGGATACCATGACTAGTGAACTCTGCCAACTGCTGACTGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR-3UTR GCA 90 bp | ACAGTCAGCAGTTGGCAGAGTTCACTAGTCATGGTATCCTTCACATACTTGGTCACGAAACCTCTGCGGTaGTTTCTTCTTCATCACCAA | + |
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Preference number: 2 (lower is better) Translates to: TVSSWQSSLVMVSFTYLVTKPLR*FLLHHQ Trigger: TTGGTGATGAAGAAGAAAGCACCGCAGAGGTTTCGT...GACCAAGTATGTGAAGGATACCATGACTAGTGAACTCTGCCAACTGCTGACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR-3UTR CCA 90 bp | TGCTCAATAGACTTCAGCTTGCCCCGGATCCTGTTAGCAGTTTTCTTGATCTCTTTTTCCTTCTGGGTTTaGAGCAGACAGGATGATGCT | + |
|
Preference number: 2 (lower is better) Translates to: CSIDFSLPRILLAVFLISFSFWV*SRQDDA Trigger: AGCATCATCCTGTCTGCTCCAAACCCAGAAGGAAAA...AGAGATCAAGAAAACTGCTAACAGGATCCGGGGCAAGCTGAAGTCTATTGAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000195906.2 |
||
| 3UTR CCA 72 bp | GCAGGCCAAGGGCTCAGGCTGGACTGGAGGGACACCTaGCTGTGGGTGGTGGGAGCCTGGGTGGTACGCATG | + |
|
Preference number: 3 (lower is better) Translates to: AGQGLRLDWRDT*LWVVGAWVVRM Trigger: CATGCGTACCACCCAGGCTCCCACCACCCACAGCCAGGTGTCCCTCCAGTCCAGCCTGAGCCCTTGGCCTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| 3UTR GCA 72 bp | TGGTCGAGAGGTCTCCTGAGCGCTCTGCGAGCACACTaGAGGCCAAGGGCTCAGGCTGGACTGGAGGGACAC | + |
|
Preference number: 3 (lower is better) Translates to: WSRGLLSALRAH*RPRAQAGLEGH Trigger: GTGTCCCTCCAGTCCAGCCTGAGCCCTTGGCCTGCAGTGTGCTCGCAGAGCGCTCAGGAGACCTCTCGACCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| 3UTR CCA 72 bp | GGAGGGACACCTGGCTGTGGGTGGTGGGAGCCTGGGTaGTACGCATGGTCTCTGCAGCTAAATCCGATGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GGTPGCGWWEPG*YAWSLQLNPMA Trigger: TGCCATCGGATTTAGCTGCAGAGACCATGCGTACCACCCAGGCTCCCACCACCCACAGCCAGGTGTCCCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| 3UTR CCA 72 bp | AGACCCAGGCTCTCTGGGCTGGCATGTCGCATCCACTaGGCTCGCGGTGTTTCATGGTACGAAACCTCTGCG | + |
|
Preference number: 3 (lower is better) Translates to: RPRLSGLACRIH*ARGVSWYETSA Trigger: CGCAGAGGTTTCGTACCATGAAACACCGCGAGCCCAGTGGATGCGACATGCCAGCCCAGAGAGCCTGGGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| 3UTR CCA 72 bp | ATCTCTGTGGTGTCCTTGAGAGAGACCCAGGCTCTCTaGGCTGGCATGTCGCATCCACTGGGCTCGCGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: ISVVSLRETQAL*AGMSHPLGSRC Trigger: ACACCGCGAGCCCAGTGGATGCGACATGCCAGCCCAGAGAGCCTGGGTCTCTCTCAAGGACACCACAGAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| 3UTR CCA 72 bp | GACTGGAGGGACACCTGGCTGTGGGTGGTGGGAGCCTaGGTGGTACGCATGGTCTCTGCAGCTAAATCCGAT | + |
|
Preference number: 3 (lower is better) Translates to: DWRDTWLWVVGA*VVRMVSAAKSD Trigger: ATCGGATTTAGCTGCAGAGACCATGCGTACCACCCAGGCTCCCACCACCCACAGCCAGGTGTCCCTCCAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| 3UTR-3UTR CAA 90 bp | CCCCTGATTCACTGGAAATCCAGATTCAGCTGCCTGCCTGGTCGAGAGGTCTCCAGGCAGTGTTCATGCTaGCCCGGGGCTGGCCCATTG | + |
|
Preference number: 3 (lower is better) Translates to: PLIHWKSRFSCLPGREVSRQCSC*PGAGPL Trigger: CAATGGGCCAGCCCCGGGCAAGCATGAACACTGCCT...GGAGACCTCTCGACCAGGCAGGCAGCTGAATCTGGATTTCCAGTGAATCAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| 3UTR CCA 72 bp | TGTGGTGTCCTTGAGAGAGACCCAGGCTCTCTGGGCTaGCATGTCGCATCCACTGGGCTCGCGGTGTTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: CGVLERDPGSLG*HVASTGLAVFH Trigger: ATGAAACACCGCGAGCCCAGTGGATGCGACATGCCAGCCCAGAGAGCCTGGGTCTCTCTCAAGGACACCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| 3UTR CCA 72 bp | CCTGGCTGTGGGTGGTGGGAGCCTGGGTGGTACGCATaGTCTCTGCAGCTAAATCCGATGGCACTGACTGAT | + |
|
Preference number: 3 (lower is better) Translates to: PGCGWWEPGWYA*SLQLNPMALTD Trigger: ATCAGTCAGTGCCATCGGATTTAGCTGCAGAGACCATGCGTACCACCCAGGCTCCCACCACCCACAGCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| 3UTR TCA 72 bp | TTTCTTAGGAACTCTGGGCACTCGTGGGTGTTGGGCTaGGGACCTGGTCCTTCAGGTGCCATCCAGGAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: FLRNSGHSWVLG*GPGPSGAIQEW Trigger: CCACTCCTGGATGGCACCTGAAGGACCAGGTCCTCAGCCCAACACCCACGAGTGCCCAGAGTTCCTAAGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| 3UTR CCA 72 bp | TGCTCGGCGCTAGCCCTGGAGTCTGAGGTTCACTCGTaGAAGGACAGGATGCTGACTAAGCTGCAGGTATGG | + |
|
Preference number: 3 (lower is better) Translates to: CSALALESEVHS*KDRMLTKLQVW Trigger: CCATACCTGCAGCTTAGTCAGCATCCTGTCCTTCCACGAGTGAACCTCAGACTCCAGGGCTAGCGCCGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| 3UTR CCA 72 bp | CCTGATTCACTGGAAATCCAGATTCAGCTGCCTGCCTaGTCGAGAGGTCTCCTGAGCGCTCTGCGAGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: PDSLEIQIQLPA*SRGLLSALRAH Trigger: GTGTGCTCGCAGAGCGCTCAGGAGACCTCTCGACCAGGCAGGCAGCTGAATCTGGATTTCCAGTGAATCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCAGGCAGGAAGGGTGAGCTCCCAGTTAGGAAGGGTGAGCTATCAGCCAGGCCCGGGACCATTCTCTaGAGTTTAGTGAGCACCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LPGRKGELPVRKGELSARPGTIL*SLVSTK Trigger: CTTGGTGCTCACTAAACTCAAGAGAATGGTCCCGGG...CCTGGCTGATAGCTCACCCTTCCTAACTGGGAGCTCACCCTTCCTGCCTGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| 3UTR TCA 72 bp | CGCATGGTCTCTGCAGCTAAATCCGATGGCACTGACTaGTGCAGAGAGGGTGAGCTGCAAAGGCCCAGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: RMVSAAKSDGTD*CREGELQRPRF Trigger: GAACCTGGGCCTTTGCAGCTCACCCTCTCTGCATCAGTCAGTGCCATCGGATTTAGCTGCAGAGACCATGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTGGGCTGGCATGTCGCATCCACTGGGCTCGCGGTGTTTCATGGTACGAAAGAGGACAAAGAGCTCTaGGGGTACGGTTGCTATGAC | + |
|
Preference number: 3 (lower is better) Translates to: SLGWHVASTGLAVFHGTKEDKEL*GYGCYD Trigger: GTCATAGCAACCGTACCCCAAGAGCTCTTTGTCCTC...TTTCGTACCATGAAACACCGCGAGCCCAGTGGATGCGACATGCCAGCCCAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031378.14 |
||
| 3UTR CCA 72 bp | TCGTGGAAGGACAGGATGCTGACTAAGCTGCAGGTATaGTCGGAGTCACCGAGGACAAAGAGCTCTTGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SWKDRMLTKLQV*SESPRTKSSWG Trigger: ACCCCAAGAGCTCTTTGTCCTCGGTGACTCCGACCATACCTGCAGCTTAGTCAGCATCCTGTCCTTCCACGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| 3UTR CCA 72 bp | AGTGCTGACTCAGTCACCCACACACCCCTGATTCACTaGAAATCCAGATTCAGCTGCCTGCCTGGTCGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SADSVTHTPLIH*KSRFSCLPGRE Trigger: CTCTCGACCAGGCAGGCAGCTGAATCTGGATTTCCAGTGAATCAGGGGTGTGTGGGTGACTGAGTCAGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| 3UTR TCA 72 bp | GTATCTGGAGTGCTGACTCAGTCACCCACACACCCCTaGTTCACTGGAAATCCAGATTCAGCTGCCTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: VSGVLTQSPTHP*FTGNPDSAACL Trigger: CAGGCAGGCAGCTGAATCTGGATTTCCAGTGAATCAGGGGTGTGTGGGTGACTGAGTCAGCACTCCAGATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| 3UTR TCA 72 bp | CGCAGATCCACTGAAGTTCGGTTCCCATTCTCGTCCTaGTCACAGCTCTGCTCAATAGACTTCAGCTTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: RRSTEVRFPFSS*SQLCSIDFSLP Trigger: GGGCAAGCTGAAGTCTATTGAGCAGAGCTGTGATCAGGACGAGAATGGGAACCGAACTTCAGTGGATCTGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195906.2 |
||
| 3UTR TCA 72 bp | CTACATCATATCCCACCAAGTGAGGCTGGGGTAGAGTaGGCACTCATCACAGTCAGCAGTTGGCAGAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LHHIPPSEAGVE*ALITVSSWQSS Trigger: TGAACTCTGCCAACTGCTGACTGTGATGAGTGCTCACTCTACCCCAGCCTCACTTGGTGGGATATGATGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| 3UTR TCA 72 bp | GGCTATGAAGTCAGCAGAGAGATGTATCTGGAGTGCTaGCTCAGTCACCCACACACCCCTGATTCACTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GYEVSREMYLEC*LSHPHTPDSLE Trigger: TTCCAGTGAATCAGGGGTGTGTGGGTGACTGAGTCAGCACTCCAGATACATCTCTCTGCTGACTTCATAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| 3UTR-3UTR CAA 90 bp | CCCATTCTCGTCCTGATCACAGCTCTGCTCAATAGACTTCAGCTTGCCCCGGATGTTTTCTTGATCTCTTaGTTCAGGTCCTCCAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: PILVLITALLNRLQLAPDVFLIS*FRSSSS Trigger: AGAGCTGGAGGACCTGAACAAAGAGATCAAGAAAAC...ATCCGGGGCAAGCTGAAGTCTATTGAGCAGAGCTGTGATCAGGACGAGAATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195906.2 |
||
| 3UTR TCA 72 bp | TCCTATTTCAAAGCTACCAAGGCAAGGCCACTGTTGTaGAATCTCTGTGGTGTCCTTGAGAGAGACCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SYFKATKARPLL*NLCGVLERDPG Trigger: GCCTGGGTCTCTCTCAAGGACACCACAGAGATTTCACAACAGTGGCCTTGCCTTGGTAGCTTTGAAATAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| 3UTR GCA 72 bp | GGAGTCACCGAGGACAAAGAGCTCTTGGGGTACGGTTaGTATGACAATGCTGTTGCGAGAATAATTCCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GVTEDKELLGYG*YDNAVARIIPR Trigger: CCTTGGAATTATTCTCGCAACAGCATTGTCATAGCAACCGTACCCCAAGAGCTCTTTGTCCTCGGTGACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031378.14 |
||
| 3UTR GCA 72 bp | CCACTGGGCTCGCGGTGTTTCATGGTACGAAACCTCTaGGGTGCTTTCTTCTTCATCACCAATAAAAACCTC | + |
|
Preference number: 3 (lower is better) Translates to: PLGSRCFMVRNL*GAFFFITNKNL Trigger: GAGGTTTTTATTGGTGATGAAGAAGAAAGCACCGCAGAGGTTTCGTACCATGAAACACCGCGAGCCCAGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| 3UTR CCA 72 bp | AGTGTAAACCAGTGCACAGCTTTATCCCACACTTCATaGTTTCTTAGGAACTCTGGGCACTCGTGGGTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: SVNQCTALSHTS*FLRNSGHSWVL Trigger: CAACACCCACGAGTGCCCAGAGTTCCTAAGAAACCATGAAGTGTGGGATAAAGCTGTGCACTGGTTTACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| 3UTR CCA 72 bp | GGTGACAGTGTGGCACACTCACCACTGAAAGGATCATaGTTTTTAGATAGTTCAGTAGCACTTGCTCACACT | + |
|
Preference number: 3 (lower is better) Translates to: GDSVAHSPLKGS*FLDSSVALAHT Trigger: AGTGTGAGCAAGTGCTACTGAACTATCTAAAAACCATGATCCTTTCAGTGGTGAGTGTGCCACACTGTCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| 3UTR TCA 72 bp | ACAAAACAGTTCTGTGATGATTCTGCAAACAAGACATaGACAGAGATCAGGCCTGGCACGAAGTCTCTTCGT | + |
|
Preference number: 3 (lower is better) Translates to: TKQFCDDSANKT*TEIRPGTKSLR Trigger: ACGAAGAGACTTCGTGCCAGGCCTGATCTCTGTTCATGTCTTGTTTGCAGAATCATCACAGAACTGTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| CDS-3UTR TCA 90 bp | GCCCTGAGGGGCTGTAAGGCAGTGTTCATGCTTGCCCGGGGCTGGCCCATTGTCGAGCCAGGACGGCAATaGCAGCCACCGCCACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALRGCKAVFMLARGWPIVEPGRQ*QPPPQQ Trigger: CTGCTGTGGCGGTGGCTGTCATTGCCGTCCTGGCTC...GACAATGGGCCAGCCCCGGGCAAGCATGAACACTGCCTTACAGCCCCTCAGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031378.14 |
||
| CDS-3UTR GCA 90 bp | CAGATTCAGCTGCCTGCCTGGTCGAGAGGTCTCCTGAGCGCTCTGCGAGCACACGCTGGATGCGGCCTTTaGTTCGCTCCCGGAACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QIQLPAWSRGLLSALRAHAGCGL*FAPGTG Trigger: TCCTGTTCCGGGAGCGAAGCAAAGGCCGCATCCAGC...GTGTGCTCGCAGAGCGCTCAGGAGACCTCTCGACCAGGCAGGCAGCTGAATCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| CDS-3UTR TCA 90 bp | CAGATTCAGCTGCCTGCCTGGTCGAGAGGTCTCCTGAGCGCTCTGCGAGCACACGTCCACAAACTTCCGTaGCAGCACCGAGTGCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QIQLPAWSRGLLSALRAHVHKLP*QHRVLG Trigger: ACCCAGCACTCGGTGCTGTCACGGAAGTTTGTGGAC...GTGTGCTCGCAGAGCGCTCAGGAGACCTCTCGACCAGGCAGGCAGCTGAATCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| CDS-3UTR TCA 90 bp | CCTGGCACGAAGTCTCTTCGTCAGCACTGCCAGCTGAGCGCAGAGCACACCCTAGTCCACAAACTTCCGTaGCAGCACCGAGTGCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGTKSLRQHCQLSAEHTLVHKLP*QHRVLG Trigger: ACCCAGCACTCGGTGCTGTCACGGAAGTTTGTGGAC...TAGGGTGTGCTCTGCGCTCAGCTGGCAGTGCTGACGAAGAGACTTCGTGCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| CDS-3UTR GCA 90 bp | AGAAGGGTGAGCTCCCAGACAGGAAGTGTGAGCTTCCAGGCAGGAAGGGTGAGCGCTGGATGCGGCCTTTaGTTCGCTCCCGGAACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RRVSSQTGSVSFQAGRVSAGCGL*FAPGTG Trigger: TCCTGTTCCGGGAGCGAAGCAAAGGCCGCATCCAGC...GCTCACCCTTCCTGCCTGGAAGCTCACACTTCCTGTCTGGGAGCTCACCCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| CDS-3UTR GCA 90 bp | CTCCGTGAGCTAACGTTCAAGGCTCTTCAGACCCTCACACTTCCTAGTCAGGGTCCAGCTGGCGCTGGATaGGGCCTTTGCTTCGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LRELTFKALQTLTLPSQGPAGAG*GLCFAP Trigger: GGGAGCGAAGCAAAGGCCGCATCCAGCGCCAGCTGG...ACCCTGACTAGGAAGTGTGAGGGTCTGAAGAGCCTTGAACGTTAGCTCACGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| CDS-3UTR TCA 90 bp | GCCCTGAGGGGCTGTAAGGCAGTGTTCATGCTTGCCCGGGGCTGGCCCATTGTCTTGGAGCAGACAGGATaGTGCTGTGGTTCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALRGCKAVFMLARGWPIVLEQTG*CCGSSS Trigger: TGAAGAAGAACCACAGCATCATCCTGTCTGCTCCAA...GACAATGGGCCAGCCCCGGGCAAGCATGAACACTGCCTTACAGCCCCTCAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| CDS-3UTR TCA 90 bp | GTGAGCTCCCAGACAGGAAGTGTGAGCTTCCAGGCAGGAAGGGTGAGCTCCCAGCGAATCTCCTCTACCTaGTGGAAGAAACCGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VSSQTGSVSFQAGRVSSQRISST*WKKPSM Trigger: CATGGACGGTTTCTTCCATCAGGTAGAGGAGATTCG...CTGGGAGCTCACCCTTCCTGCCTGGAAGCTCACACTTCCTGTCTGGGAGCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| CDS-3UTR TCA 90 bp | AAACCTCAGTGCTCGGCGCTAGCCCTGGAGTCTGAGGTTCACTCGTGGAAGGACTGGTCTCCAGCTTCATaGTGTCTTTGTGGCGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: KPQCSALALESEVHSWKDWSPAS*CLCGGT Trigger: AGTCCCGCCACAAAGACATCATGAAGCTGGAGACCA...GTCCTTCCACGAGTGAACCTCAGACTCCAGGGCTAGCGCCGAGCACTGAGGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| CDS-3UTR TCA 90 bp | GTGAGCTCCCAGACAGGAAGTGTGAGCTTCCAGGCAGGAAGGGTGAGCTCCCAGACATGGCCATATCCATaGACATCTCGTGCAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSSQTGSVSFQAGRVSSQTWPYP*TSRAAL Trigger: GAGAGCTGCACGAGATGTTCATGGATATGGCCATGT...CTGGGAGCTCACCCTTCCTGCCTGGAAGCTCACACTTCCTGTCTGGGAGCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| CDS-3UTR TCA 90 bp | GCCCTGAGGGGCTGTAAGGCAGTGTTCATGCTTGCCCGGGGCTGGCCCATTGTCCCTTGCTCTGGTATTTaGTGGCTTTCTTCGTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ALRGCKAVFMLARGWPIVPCSGI*WLSSSL Trigger: AAGAGACGAAGAAAGCCATCAAATACCAGAGCAAGG...GACAATGGGCCAGCCCCGGGCAAGCATGAACACTGCCTTACAGCCCCTCAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| CDS-3UTR CCA 90 bp | GATTCAGCTGCCTGCCTGGTCGAGAGGTCTCCTGAGCGCTCTGCGAGCACACTGCATGCTGAGCAATCCTaGCTATGCTGCTTCGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: DSAACLVERSPERSASTLHAEQS*LCCFES Trigger: AGATTCGAAGCAGCATAGCCAGGATTGCTCAGCATG...CAGTGTGCTCGCAGAGCGCTCAGGAGACCTCTCGACCAGGCAGGCAGCTGAATC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| CDS-3UTR TCA 90 bp | CCCCTGATTCACTGGAAATCCAGATTCAGCTGCCTGCCTGGTCGAGAGGTCTCCCAACCGACAAGCCAATaGTTAGAGCCAGGACGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PLIHWKSRFSCLPGREVSQPTSQ*LEPGRQ Trigger: TTGCCGTCCTGGCTCTAATCATTGGCTTGTCGGTTG...GGAGACCTCTCGACCAGGCAGGCAGCTGAATCTGGATTTCCAGTGAATCAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031378.14 |
||
| CDS-3UTR CCA 90 bp | CAGATTCAGCTGCCTGCCTGGTCGAGAGGTCTCCTGAGCGCTCTGCGAGCACACTTTTCCTTCTGGGTTTaGAGCAGACAGGATGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: QIQLPAWSRGLLSALRAHFSFWV*SRQDDA Trigger: AGCATCATCCTGTCTGCTCCAAACCCAGAAGGAAAA...GTGTGCTCGCAGAGCGCTCAGGAGACCTCTCGACCAGGCAGGCAGCTGAATCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| CDS-3UTR CCA 90 bp | AGGCAGTGTTCATGCTTGCCCGGGGCTGGCCCATTGTCCTTCACAAGGCAGTGTCGCCTGGCCTTGCTCTaGTATTTGATGGCTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RQCSCLPGAGPLSFTRQCRLALL*YLMAFF Trigger: GAAGAAAGCCATCAAATACCAGAGCAAGGCCAGGCG...ACACTGCCTTGTGAAGGACAATGGGCCAGCCCCGGGCAAGCATGAACACTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| CDS-3UTR TCA 90 bp | TCTCTGGGCTGGCATGTCGCATCCACTGGGCTCGCGGTGTTTCATGGTACGAAAGATCCTTCTCCACAATaGCGACAGCAGTGTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLGWHVASTGLAVFHGTKDPSPQ*RQQCLH Trigger: ATGGAGACACTGCTGTCGTCATTGTGGAGAAGGATC...TTTCGTACCATGAAACACCGCGAGCCCAGTGGATGCGACATGCCAGCCCAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| CDS-3UTR TCA 90 bp | CCCCTGATTCACTGGAAATCCAGATTCAGCTGCCTGCCTGGTCGAGAGGTCTCCCGAATCTCCTCTACCTaGTGGAAGAAACCGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: PLIHWKSRFSCLPGREVSRISST*WKKPSM Trigger: CATGGACGGTTTCTTCCATCAGGTAGAGGAGATTCG...GGAGACCTCTCGACCAGGCAGGCAGCTGAATCTGGATTTCCAGTGAATCAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| CDS-3UTR TCA 90 bp | AGCTATCAGCCAGGAGTGGCTGCACTACAGGCTAACTCTAGACCAGGACCCACATGGTCTCCAGCTTCATaGTGTCTTTGTGGCGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SYQPGVAALQANSRPGPTWSPAS*CLCGGT Trigger: AGTCCCGCCACAAAGACATCATGAAGCTGGAGACCA...TGTGGGTCCTGGTCTAGAGTTAGCCTGTAGTGCAGCCACTCCTGGCTGATAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR CAA 72 bp | GCAGGTATGGTCGGAGTCACCGAGGACAAAGAGCTCTaGGGGTACGGTTGCTATGACAATGCTGTTGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AGMVGVTEDKEL*GYGCYDNAVAR Trigger: TCTCGCAACAGCATTGTCATAGCAACCGTACCCCAAGAGCTCTTTGTCCTCGGTGACTCCGACCATACCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031378.14 |
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| CDS-3UTR TCA 90 bp | CCTGATTCACTGGAAATCCAGATTCAGCTGCCTGCCTGGTCGAGAGGTCTCCTGACGTCTTCTACATGCTaGGCAATCCTGGCTATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PDSLEIQIQLPAWSRGLLTSSTC*AILAML Trigger: CAGCATAGCCAGGATTGCTCAGCATGTAGAAGACGT...CAGGAGACCTCTCGACCAGGCAGGCAGCTGAATCTGGATTTCCAGTGAATCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| CDS-3UTR TCA 90 bp | CTGACTGATGCAGAGAGGGTGAGCTGCAAAGGCCCAGGTTCATCTTCAGAGCTCACGTCTTCTACATGCTaGGCAATCCTGGCTATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTDAERVSCKGPGSSSELTSSTC*AILAML Trigger: CAGCATAGCCAGGATTGCTCAGCATGTAGAAGACGT...GAGCTCTGAAGATGAACCTGGGCCTTTGCAGCTCACCCTCTCTGCATCAGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| CDS-3UTR TCA 90 bp | AGGCAGTGTTCATGCTTGCCCGGGGCTGGCCCATTGTCCTTCACAAGGCAGTGTCCTTGCTCTGGTATTTaGTGGCTTTCTTCGTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RQCSCLPGAGPLSFTRQCPCSGI*WLSSSL Trigger: AAGAGACGAAGAAAGCCATCAAATACCAGAGCAAGG...ACACTGCCTTGTGAAGGACAATGGGCCAGCCCCGGGCAAGCATGAACACTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| CDS-3UTR GCA 90 bp | AGCTCCCAGACAGGAAGTGTGAGCTTCCAGGCAGGAAGGGTGAGCTCCCAGTTATCCCGGAACAGGATCTaGGCTTCATTGTATTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSQTGSVSFQAGRVSSQLSRNRI*ASLYSV Trigger: GACAGAATACAATGAAGCGCAGATCCTGTTCCGGGA...TAACTGGGAGCTCACCCTTCCTGCCTGGAAGCTCACACTTCCTGTCTGGGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| CDS-3UTR TCA 90 bp | CCCCTGATTCACTGGAAATCCAGATTCAGCTGCCTGCCTGGTCGAGAGGTCTCCAAACCGTCCATGAAATaGTCCTTCTCCACAATGACG | + |
|
Preference number: 4 (lower is better) Translates to: PLIHWKSRFSCLPGREVSKPSMK*SFSTMT Trigger: CGTCATTGTGGAGAAGGATCATTTCATGGACGGTTT...GGAGACCTCTCGACCAGGCAGGCAGCTGAATCTGGATTTCCAGTGAATCAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| CDS-3UTR TCA 90 bp | GGAAGGGTGAGCTATCAGCCAGGAGTGGCTGCACTACAGGCTAACTCTAGACCATTGGAGCAGACAGGATaGTGCTGTGGTTCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRVSYQPGVAALQANSRPLEQTG*CCGSSS Trigger: TGAAGAAGAACCACAGCATCATCCTGTCTGCTCCAA...TGGTCTAGAGTTAGCCTGTAGTGCAGCCACTCCTGGCTGATAGCTCACCCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| CDS-3UTR TCA 90 bp | GACTACACAAATGAGGACGAACATCACCTTTGCCACCCTGAGGGAGAGGCAAGCACATGGCCATATCCATaGACATCTCGTGCAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DYTNEDEHHLCHPEGEASTWPYP*TSRAAL Trigger: GAGAGCTGCACGAGATGTTCATGGATATGGCCATGT...GCTTGCCTCTCCCTCAGGGTGGCAAAGGTGATGTTCGTCCTCATTTGTGTAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031378.14 |
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| CDS-3UTR TCA 90 bp | GTTCCCATTCTCGTCCTGATCACAGCTCTGCTCAATAGACTTCAGCTTGCCCCGGCTTCGAATCTCCTCTaGTGGAAGAAACCGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VPILVLITALLNRLQLAPASNLL*WKKPSM Trigger: CATGGACGGTTTCTTCCATCAGAGGAGATTCGAAGC...CGGGGCAAGCTGAAGTCTATTGAGCAGAGCTGTGATCAGGACGAGAATGGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195906.2 |
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| CDS-3UTR GCA 90 bp | CTGACTGATGCAGAGAGGGTGAGCTGCAAAGGCCCAGGTTCATCTTCAGAGCTCTCCCGGAACAGGATCTaGGCTTCATTGTATTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTDAERVSCKGPGSSSELSRNRI*ASLYSV Trigger: GACAGAATACAATGAAGCGCAGATCCTGTTCCGGGA...GAGCTCTGAAGATGAACCTGGGCCTTTGCAGCTCACCCTCTCTGCATCAGTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| CDS-3UTR CCA 90 bp | ACGAAGTCTCTTCGTCAGCACTGCCAGCTGAGCGCAGAGCACACCCTAATTACACGCCTGGCCTTGCTCTaGTATTTGATGGCTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TKSLRQHCQLSAEHTLITRLALL*YLMAFF Trigger: GAAGAAAGCCATCAAATACCAGAGCAAGGCCAGGCG...TGTAATTAGGGTGTGCTCTGCGCTCAGCTGGCAGTGCTGACGAAGAGACTTCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| CDS-3UTR TCA 90 bp | CCTGATTCACTGGAAATCCAGATTCAGCTGCCTGCCTGGTCGAGAGGTCTCCTGAAACCGTCCATGAAATaGTCCTTCTCCACAATGACG | + |
|
Preference number: 4 (lower is better) Translates to: PDSLEIQIQLPAWSRGLLKPSMK*SFSTMT Trigger: CGTCATTGTGGAGAAGGATCATTTCATGGACGGTTT...CAGGAGACCTCTCGACCAGGCAGGCAGCTGAATCTGGATTTCCAGTGAATCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| CDS-3UTR CCA 90 bp | GGCCACTGTTGTGAAATCTCTGTGGTGTCCTTGAGAGAGACCCAGGCTCTCTGGTTTTCCTTCTGGGTTTaGAGCAGACAGGATGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: GHCCEISVVSLRETQALWFSFWV*SRQDDA Trigger: AGCATCATCCTGTCTGCTCCAAACCCAGAAGGAAAA...CCAGAGAGCCTGGGTCTCTCTCAAGGACACCACAGAGATTTCACAACAGTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| CDS-3UTR CCA 90 bp | GGAAGGGTGAGCTATCAGCCAGGAGTGGCTGCACTACAGGCTAACTCTAGACCATTCATGATGTCTTTGTaGCGGGACTCGATCTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: GRVSYQPGVAALQANSRPFMMSL*RDSISL Trigger: CAATGAGATCGAGTCCCGCCACAAAGACATCATGAA...TGGTCTAGAGTTAGCCTGTAGTGCAGCCACTCCTGGCTGATAGCTCACCCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR CAA 72 bp | CCATCCAGGAGTGGCTATGTACCCGGGACCATTCTCTaGAGTTTAGTGAGCACCAAGTTTGCTCCATCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSRSGYVPGTIL*SLVSTKFAPSS Trigger: TGACGATGGAGCAAACTTGGTGCTCACTAAACTCAAGAGAATGGTCCCGGGTACATAGCCACTCCTGGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR CAA 72 bp | GGCTGGGGTAGAGTGAGCACTCATCACAGTCAGCAGTaGGCAGAGTTCACTAGTCATGGTATCCTTCACATA | + |
|
Preference number: 4 (lower is better) Translates to: GWGRVSTHHSQQ*AEFTSHGILHI Trigger: TATGTGAAGGATACCATGACTAGTGAACTCTGCCAACTGCTGACTGTGATGAGTGCTCACTCTACCCCAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| CDS-3UTR TCA 90 bp | CTGCTCAATAGACTTCAGCTTGCCCCGGATCCTGTTAGCAGTTTTCTTGATCTCGATCCTTCTCCACAATaGCGACAGCAGTGTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLNRLQLAPDPVSSFLDLDPSPQ*RQQCLH Trigger: ATGGAGACACTGCTGTCGTCATTGTGGAGAAGGATC...GAGATCAAGAAAACTGCTAACAGGATCCGGGGCAAGCTGAAGTCTATTGAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195906.2 |
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| CDS-3UTR TCA 90 bp | ACAGTCAGCAGTTGGCAGAGTTCACTAGTCATGGTATCCTTCACATACTTGGTCGATCCTTCTCCACAATaGCGACAGCAGTGTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TVSSWQSSLVMVSFTYLVDPSPQ*RQQCLH Trigger: ATGGAGACACTGCTGTCGTCATTGTGGAGAAGGATC...GACCAAGTATGTGAAGGATACCATGACTAGTGAACTCTGCCAACTGCTGACTGT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| CDS-3UTR GCA 90 bp | GGCCACTGTTGTGAAATCTCTGTGGTGTCCTTGAGAGAGACCCAGGCTCTCTGGATCTCATTGAGAGCTTaGCTAGTGATTTGTGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: GHCCEISVVSLRETQALWISLRA*LVICES Trigger: AGATTCACAAATCACTAGGCAAGCTCTCAATGAGAT...CCAGAGAGCCTGGGTCTCTCTCAAGGACACCACAGAGATTTCACAACAGTGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| CDS-3UTR GCA 90 bp | ACGAAGTCTCTTCGTCAGCACTGCCAGCTGAGCGCAGAGCACACCCTAATTACAATCTCATTGAGAGCTTaGCTAGTGATTTGTGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: TKSLRQHCQLSAEHTLITISLRA*LVICES Trigger: AGATTCACAAATCACTAGGCAAGCTCTCAATGAGAT...TGTAATTAGGGTGTGCTCTGCGCTCAGCTGGCAGTGCTGACGAAGAGACTTCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| CDS-3UTR CCA 90 bp | ACAGTCAGCAGTTGGCAGAGTTCACTAGTCATGGTATCCTTCACATACTTGGTCCATGCTGAGCAATCCTaGCTATGCTGCTTCGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: TVSSWQSSLVMVSFTYLVHAEQS*LCCFES Trigger: AGATTCGAAGCAGCATAGCCAGGATTGCTCAGCATG...GACCAAGTATGTGAAGGATACCATGACTAGTGAACTCTGCCAACTGCTGACTGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| 3UTR CAA 72 bp | TGGCAGAGTTCACTAGTCATGGTATCCTTCACATACTaGGTCGCTGGGCCATCTATTCACAAGTGTAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: WQSSLVMVSFTY*VAGPSIHKCKP Trigger: TGGTTTACACTTGTGAATAGATGGCCCAGCGACCAAGTATGTGAAGGATACCATGACTAGTGAACTCTGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| CDS-3UTR CAA 90 bp | GCTAACTCTAGACCAGGACCCACAGCCCAGCCTGCTGCAGTAGCTCTCGGCACACGCTGGATGCGGCCTTaGCTTCGCTCCCGGAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: ANSRPGPTAQPAAVALGTRWMRP*LRSRNR Trigger: CCTGTTCCGGGAGCGAAGCAAAGGCCGCATCCAGCG...TGTGCCGAGAGCTACTGCAGCAGGCTGGGCTGTGGGTCCTGGTCTAGAGTTAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| CDS-3UTR CAA 90 bp | TCTCTGGGCTGGCATGTCGCATCCACTGGGCTCGCGGTGTTTCATGGTACGAAACGCTGGATGCGGCCTTaGCTTCGCTCCCGGAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLGWHVASTGLAVFHGTKRWMRP*LRSRNR Trigger: CCTGTTCCGGGAGCGAAGCAAAGGCCGCATCCAGCG...TTTCGTACCATGAAACACCGCGAGCCCAGTGGATGCGACATGCCAGCCCAGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| CDS-3UTR CAA 90 bp | AGAAGGGTGAGCTCCCAGACAGGAAGTGTGAGCTTCCAGGCAGGAAGGGTGAGCACCTTCCGCCTGGCCTaGCTCTGGTATTTGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RRVSSQTGSVSFQAGRVSTFRLA*LWYLMA Trigger: AGCCATCAAATACCAGAGCAAGGCCAGGCGGAAGGT...GCTCACCCTTCCTGCCTGGAAGCTCACACTTCCTGTCTGGGAGCTCACCCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100680.10 |
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| CDS-3UTR CAA 90 bp | TATCAGCCAGGAGTGGCTGCACTACAGGCTAACTCTAGACCAGGACCCACAGCCTTTTTCCGCCTGGCCTaGCTCTGGTATTTGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: YQPGVAALQANSRPGPTAFFRLA*LWYLMA Trigger: AGCCATCAAATACCAGAGCAAGGCCAGGCGGAAAAA...GGCTGTGGGTCCTGGTCTAGAGTTAGCCTGTAGTGCAGCCACTCCTGGCTGATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031378.14 |
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| CDS-3UTR CAA 90 bp | ACGAAGTCTCTTCGTCAGCACTGCCAGCTGAGCGCAGAGCACACCCTAATTACAAGCTTCATGATGTCTTaGTGGCGGGACTCGATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TKSLRQHCQLSAEHTLITSFMMS*WRDSIS Trigger: TGAGATCGAGTCCCGCCACAAAGACATCATGAAGCT...TGTAATTAGGGTGTGCTCTGCGCTCAGCTGGCAGTGCTGACGAAGAGACTTCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| CDS CCA 90 bp | ACCGCCACAGCAGCAATTATCCACTTTTTCCGCCTGGCCTTGCTCTaGTATTTGATGGCTTTCTTCGTCTCTTCCTTGGCATGTTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: TATAAIIHFFRLALL*YLMAFFVSSLACST Trigger: CGTGGAACATGCCAAGGAAGAGACGAAGAAAGCCATCAAATACCAGAGCAAGGCCAGGCGGAAAAAGTGGATAATTGCTGCTGTGGCGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031378.14 |
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| CDS-3UTR CAA 90 bp | GGCCACTGTTGTGAAATCTCTGTGGTGTCCTTGAGAGAGACCCAGGCTCTCTGGGTTTTCTTGATCTCTTaGTTCAGGTCCTCCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GHCCEISVVSLRETQALWVFLIS*FRSSSS Trigger: AGAGCTGGAGGACCTGAACAAAGAGATCAAGAAAAC...CCAGAGAGCCTGGGTCTCTCTCAAGGACACCACAGAGATTTCACAACAGTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| CDS CCA 90 bp | ACTACACAAATGAGGACGAACATCACCTTCCGCCTGGCCTTGCTCTaGTATTTGATGGCTTTCTTCGTCTCTTCCTTGGCATGTTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: TTQMRTNITFRLALL*YLMAFFVSSLACST Trigger: CGTGGAACATGCCAAGGAAGAGACGAAGAAAGCCATCAAATACCAGAGCAAGGCCAGGCGGAAGGTGATGTTCGTCCTCATTTGTGTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100680.10 |
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| CDS TCA 90 bp | CAGCAGCAATTATCCACTTTTTCCGCCTGGCCTTGCTCTGGTATTTaGTGGCTTTCTTCGTCTCTTCCTTGGCATGTTCCACGTAATCTA | + |
|
Preference number: 5 (lower is better) Translates to: QQQLSTFSAWPCSGI*WLSSSLPWHVPRNL Trigger: TAGATTACGTGGAACATGCCAAGGAAGAGACGAAGAAAGCCATCAAATACCAGAGCAAGGCCAGGCGGAAAAAGTGGATAATTGCTGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031378.14 |
||
| CDS-3UTR CAA 90 bp | AGTTCTGTGATGATTCTGCAAACAAGACATGAACAGAGATCAGGCCTGGCACGAGTTTTCTTGATCTCTTaGTTCAGGTCCTCCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSVMILQTRHEQRSGLARVFLIS*FRSSSS Trigger: AGAGCTGGAGGACCTGAACAAAGAGATCAAGAAAAC...TCGTGCCAGGCCTGATCTCTGTTCATGTCTTGTTTGCAGAATCATCACAGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| CDS GCA 90 bp | AGCTTCATGATGTCTTTGTGGCGGGACTCGATCTCATTGAGAGCTTaGCTAGTGATTTGTGAATCTGATATAATATCCGAGATGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SFMMSLWRDSISLRA*LVICESDIISEMKM Trigger: CATCTTCATCTCGGATATTATATCAGATTCACAAATCACTAGGCAAGCTCTCAATGAGATCGAGTCCCGCCACAAAGACATCATGAAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| CDS TCA 72 bp | CACCGAGTGCTGGGTCCTTCGTATCCGCAGATCCACTaGAGTTCGGTTCCCATTCTCGTCCTGATCACAGCT | + |
|
Preference number: 6 (lower is better) Translates to: HRVLGPSYPQIH*SSVPILVLITA Trigger: AGCTGTGATCAGGACGAGAATGGGAACCGAACTTCAGTGGATCTGCGGATACGAAGGACCCAGCACTCGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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| CDS CAA 90 bp | ACAGCCACCGCCACAGCAGCAATTATCCACTTTTTCCGCCTGGCCTaGCTCTGGTATTTGATGGCTTTCTTCGTCTCTTCCTTGGCATGT | + |
|
Preference number: 6 (lower is better) Translates to: TATATAAIIHFFRLA*LWYLMAFFVSSLAC Trigger: ACATGCCAAGGAAGAGACGAAGAAAGCCATCAAATACCAGAGCAAGGCCAGGCGGAAAAAGTGGATAATTGCTGCTGTGGCGGTGGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031378.14 |
||
| CDS CAA 72 bp | GCCACAGCAGCAATTATCCACTTTTTCCGCCTGGCCTaGCTCTGGTATTTGATGGCTTTCTTCGTCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ATAAIIHFFRLA*LWYLMAFFVSS Trigger: GGAAGAGACGAAGAAAGCCATCAAATACCAGAGCAAGGCCAGGCGGAAAAAGTGGATAATTGCTGCTGTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031378.14 |
||
| CDS CCA 72 bp | GGTTCTTCTTCACGTCTTCTACATGCTGAGCAATCCTaGCTATGCTGCTTCGAATCTCCTCTACCTGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: GSSSRLLHAEQS*LCCFESPLPDG Trigger: TCCATCAGGTAGAGGAGATTCGAAGCAGCATAGCCAGGATTGCTCAGCATGTAGAAGACGTGAAGAAGAACC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 ENSMUST00000149877.2 |
||
| CDS CCA 72 bp | GCAGCAATTATCCACTTTTTCCGCCTGGCCTTGCTCTaGTATTTGATGGCTTTCTTCGTCTCTTCCTTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: AAIIHFFRLALL*YLMAFFVSSLA Trigger: TGCCAAGGAAGAGACGAAGAAAGCCATCAAATACCAGAGCAAGGCCAGGCGGAAAAAGTGGATAATTGCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031378.14 |
||
| CDS CAA 90 bp | AAAGTGACTACACAAATGAGGACGAACATCACCTTCCGCCTGGCCTaGCTCTGGTATTTGATGGCTTTCTTCGTCTCTTCCTTGGCATGT | + |
|
Preference number: 6 (lower is better) Translates to: KVTTQMRTNITFRLA*LWYLMAFFVSSLAC Trigger: ACATGCCAAGGAAGAGACGAAGAAAGCCATCAAATACCAGAGCAAGGCCAGGCGGAAGGTGATGTTCGTCCTCATTTGTGTAGTCACTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100680.10 |
||
| CDS GCA 72 bp | TCTTCACGTCTTCTACATGCTGAGCAATCCTGGCTATaGTGCTTCGAATCTCCTCTACCTGATGGAAGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: SSRLLHAEQSWL*CFESPLPDGRN Trigger: GTTTCTTCCATCAGGTAGAGGAGATTCGAAGCAGCATAGCCAGGATTGCTCAGCATGTAGAAGACGTGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 ENSMUST00000149877.2 |
||
| CDS GCA 72 bp | ATGTCTTTGTGGCGGGACTCGATCTCATTGAGAGCTTaGCTAGTGATTTGTGAATCTGATATAATATCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: MSLWRDSISLRA*LVICESDIISE Trigger: CTCGGATATTATATCAGATTCACAAATCACTAGGCAAGCTCTCAATGAGATCGAGTCCCGCCACAAAGACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
||
| CDS CAA 72 bp | AGCTTCATGATGTCTTTGTGGCGGGACTCGATCTCATaGAGAGCTTGCCTAGTGATTTGTGAATCTGATATA | + |
|
Preference number: 6 (lower is better) Translates to: SFMMSLWRDSIS*RACLVICESDI Trigger: TATATCAGATTCACAAATCACTAGGCAAGCTCTCAATGAGATCGAGTCCCGCCACAAAGACATCATGAAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031378.14 ENSMUST00000100680.10 |
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