Pregenerated sensors for STX1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030806Ensembl transcript IDs: ENSMUST00000106267.5, ENSMUST00000156135.3
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGCTATCTATGTGCGGCAAGGTGAGAGCCAGGGACTCCAGGGTCTaGATGAGGGTGAGAGTGGCTGGAACTGCCTGGGTCTGTTTTGGG | + |
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Preference number: 1 (lower is better) Translates to: LLSMCGKVRARDSRV*MRVRVAGTAWVCFG Trigger: CCCAAAACAGACCCAGGCAGTTCCAGCCACTCTCACCCTCATGCAGACCCTGGAGTCCCTGGCTCTCACCTTGCCGCACATAGATAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR CCA 90 bp | GCCTCTGACATCTCCAAAGAAGCCAAAGGTGGGGGCAGGAGGCGCTaGATGGCCCTGCAGGAGATTGTTCTGGAATGGATAGGCAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: ASDISKEAKGGGRRR*MALQEIVLEWIGRL Trigger: GAGCCTGCCTATCCATTCCAGAACAATCTCCTGCAGGGCCATCCAGCGCCTCCTGCCCCCACCTTTGGCTTCTTTGGAGATGTCAGAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR CCA 90 bp | AGGTTGGGGAGAAGGGAGCTAGGGGCCGACCATCTTGTCCTCTGTTaGGTAGGTAGGGCAGGGCGAGTGCATAGAACACACGTGTACACG | + |
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Preference number: 1 (lower is better) Translates to: RLGRRELGADHLVLC*VGRAGRVHRTHVYT Trigger: CGTGTACACGTGTGTTCTATGCACTCGCCCTGCCCTACCTACCCAACAGAGGACAAGATGGTCGGCCCCTAGCTCCCTTCTCCCCAACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR CCA 90 bp | TGTGAACACCATGACTGGGGTGTCGGGGAGGCCACTAGAAACATCTaGGTTAATGGGAGTTCTGGCTGGCTGGGCTCAAAGACGCCGGGA | + |
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Preference number: 1 (lower is better) Translates to: CEHHDWGVGEATRNI*VNGSSGWLGSKTPG Trigger: TCCCGGCGTCTTTGAGCCCAGCCAGCCAGAACTCCCATTAACCCAGATGTTTCTAGTGGCCTCCCCGACACCCCAGTCATGGTGTTCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR CCA 90 bp | GGAGCAGCATGGCAGCCACAGTCCTGTCCTTGTGAACACCATGACTaGGGTGTCGGGGAGGCCACTAGAAACATCTGGGTTAATGGGAGT | + |
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Preference number: 1 (lower is better) Translates to: GAAWQPQSCPCEHHD*GVGEATRNIWVNGS Trigger: ACTCCCATTAACCCAGATGTTTCTAGTGGCCTCCCCGACACCCCAGTCATGGTGTTCACAAGGACAGGACTGTGGCTGCCATGCTGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR GCA 90 bp | ACACACGCTGGGGTGTCCACACGTCTTGAGCATGTGCCCTCGGCATaGATGTTGGTGTGCATGTGTGATCACGCCTGCTGCTATCTATGT | + |
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Preference number: 1 (lower is better) Translates to: THAGVSTRLEHVPSA*MLVCMCDHACCYLC Trigger: ACATAGATAGCAGCAGGCGTGATCACACATGCACACCAACATGCATGCCGAGGGCACATGCTCAAGACGTGTGGACACCCCAGCGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR GCA 90 bp | TACACAAGTACACACACGCTGGGGTGTCCACACGTCTTGAGCATGTaGCCTCGGCATGCATGTTGGTGTGCATGTGTGATCACGCCTGCT | + |
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Preference number: 1 (lower is better) Translates to: YTSTHTLGCPHVLSM*PRHACWCACVITPA Trigger: AGCAGGCGTGATCACACATGCACACCAACATGCATGCCGAGGGCACATGCTCAAGACGTGTGGACACCCCAGCGTGTGTGTACTTGTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR CCA 90 bp | GCTGTTTATGTGCGCAGCCCCAGCACCTATGTGTGGCTACCTCTCTaGAACTCCCCAGCCTCAGCATTCATGAGTACACGAGTCTGTGCT | + |
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Preference number: 1 (lower is better) Translates to: AVYVRSPSTYVWLPL*NSPASAFMSTRVCA Trigger: AGCACAGACTCGTGTACTCATGAATGCTGAGGCTGGGGAGTTCCAGAGAGGTAGCCACACATAGGTGCTGGGGCTGCGCACATAAACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR TCA 90 bp | CCTATGTGTGGCTACCTCTCTGGAACTCCCCAGCCTCAGCATTCATaGGTACACGAGTCTGTGCTAGCTGTCCAAGGCTCAGCTCTACTG | + |
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Preference number: 1 (lower is better) Translates to: PMCGYLSGTPQPQHS*VHESVLAVQGSALL Trigger: CAGTAGAGCTGAGCCTTGGACAGCTAGCACAGACTCGTGTACTCATGAATGCTGAGGCTGGGGAGTTCCAGAGAGGTAGCCACACATAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR GCA 90 bp | ATGGTTTGGGGTGTGTGGAGGGCACGCAGCACACATCTGAGAACATaGAACAGACACCAGCCCCCAGACAACCATCCAGGATACACATGT | + |
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Preference number: 1 (lower is better) Translates to: MVWGVWRARSTHLRT*NRHQPPDNHPGYTC Trigger: ACATGTGTATCCTGGATGGTTGTCTGGGGGCTGGTGTCTGTTGCATGTTCTCAGATGTGTGCTGCGTGCCCTCCACACACCCCAAACCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR CCA 90 bp | CACACACACACACACACTATCCATGTCTATTCACACAGGACAGGTTaGGCCATGGTGGGCTGCTACAGTCAGCACAGCAGCCAGATAGAG | + |
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Preference number: 1 (lower is better) Translates to: HTHTHTIHVYSHRTG*AMVGCYSQHSSQIE Trigger: CTCTATCTGGCTGCTGTGCTGACTGTAGCAGCCCACCATGGCCCAACCTGTCCTGTGTGAATAGACATGGATAGTGTGTGTGTGTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR CCA 90 bp | CGCTCAAGGTATGATGGGAGCATGATGACCCATGGGCACAAGAGATaGACACGCAGTGTGCTTTGTAAGAGGCAAGGAAGGGGAGAATGG | + |
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Preference number: 1 (lower is better) Translates to: RSRYDGSMMTHGHKR*TRSVLCKRQGRGEW Trigger: CCATTCTCCCCTTCCTTGCCTCTTACAAAGCACACTGCGTGTCCATCTCTTGTGCCCATGGGTCATCATGCTCCCATCATACCTTGAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR TCA 90 bp | CTTCTCCCCGAGTTGTGCTGCAGTTGCGTACACATACACTTCATGTaGCTACCCTACTCCAGGGCAGGACACACACTCCTCTATGTATCG | + |
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Preference number: 1 (lower is better) Translates to: LLPELCCSCVHIHFM*LPYSRAGHTLLYVS Trigger: CGATACATAGAGGAGTGTGTGTCCTGCCCTGGAGTAGGGTAGTCACATGAAGTGTATGTGTACGCAACTGCAGCACAACTCGGGGAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR CCA 90 bp | GAATGTGGGTCTGTGTTTCCGCATCAGACGGTCGCACACTTTCGATaGAGCAGTGGATGTGGCTTCTGTTTTGACAGATGGAGAGGAAGC | + |
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Preference number: 1 (lower is better) Translates to: ECGSVFPHQTVAHFR*SSGCGFCFDRWRGS Trigger: GCTTCCTCTCCATCTGTCAAAACAGAAGCCACATCCACTGCTCCATCGAAAGTGTGCGACCGTCTGATGCGGAAACACAGACCCACATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR TCA 90 bp | GCTGTCCAAGGCTCAGCTCTACTGTCAGGCAGAAACAGAAAAGTATaGATGTGGGTCTGTGTTTCCGCATCAGACGGTCGCACACTTTCG | + |
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Preference number: 1 (lower is better) Translates to: AVQGSALLSGRNRKV*MWVCVSASDGRTLS Trigger: CGAAAGTGTGCGACCGTCTGATGCGGAAACACAGACCCACATTCATACTTTTCTGTTTCTGCCTGACAGTAGAGCTGAGCCTTGGACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR TCA 90 bp | CCAGGATACACATGTGGACAGCAGTCAACAAGCATGTCCATCCTGTaGTGTATGGGTCTTGTAGAAAGCTGGGTTAGGGCTGACTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: PGYTCGQQSTSMSIL*CMGLVESWVRADSQ Trigger: CTGAGAGTCAGCCCTAACCCAGCTTTCTACAAGACCCATACATCACAGGATGGACATGCTTGTTGACTGCTGTCCACATGTGTATCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR GCA 90 bp | CATTTACCTTCTGCCTGCTCCCAAAGAACCCATAAACTGCACAGCTaGCCACCTGATATAAGAGTTCCTCCATTCCTTACTGCCACAGAC | + |
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Preference number: 1 (lower is better) Translates to: HLPSACSQRTHKLHS*PPDIRVPPFLTATD Trigger: GTCTGTGGCAGTAAGGAATGGAGGAACTCTTATATCAGGTGGGCAGCTGTGCAGTTTATGGGTTCTTTGGGAGCAGGCAGAAGGTAAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR-3UTR TCA 90 bp | GGGCAGGAGGCGCTGGATGGCCCTGCAGGAGATTGTTCTGGAATGGATAGGCAGGGTGTCCACACGTCTTaGGCATGTGCCCTCGGCATG | + |
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Preference number: 2 (lower is better) Translates to: GQEALDGPAGDCSGMDRQGVHTS*ACALGM Trigger: CATGCCGAGGGCACATGCTCAAGACGTGTGGACACC...CTGCCTATCCATTCCAGAACAATCTCCTGCAGGGCCATCCAGCGCCTCCTGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR-3UTR TCA 90 bp | CTGACATCTCCAAAGAAGCCAAAGGTGGGGGCAGGAGGCGCTGGATGGCCCTGCTCCACGTGCTTCCCCTaGACTCCAAGACCCAACACA | + |
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Preference number: 2 (lower is better) Translates to: LTSPKKPKVGAGGAGWPCSTCFP*TPRPNT Trigger: TGTGTTGGGTCTTGGAGTTCAGGGGAAGCACGTGGA...GCAGGGCCATCCAGCGCCTCCTGCCCCCACCTTTGGCTTCTTTGGAGATGTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR-3UTR GCA 90 bp | CTGACATCTCCAAAGAAGCCAAAGGTGGGGGCAGGAGGCGCTGGATGGCCCTGCGGCAGGGAAGAGATCTaGTGTCAGAGCTGGCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: LTSPKKPKVGAGGAGWPCGREEI*CQSWLR Trigger: TCTGAGCCAGCTCTGACAGCAGATCTCTTCCCTGCC...GCAGGGCCATCCAGCGCCTCCTGCCCCCACCTTTGGCTTCTTTGGAGATGTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR-3UTR TCA 90 bp | GGGCAGGAGGCGCTGGATGGCCCTGCAGGAGATTGTTCTGGAATGGATAGGCAGGGTCTGTTTTGGGAGTaGGCTTGGAGCAGGGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: GQEALDGPAGDCSGMDRQGLFWE*AWSREK Trigger: CTTTTCCCTGCTCCAAGCTCACTCCCAAAACAGACC...CTGCCTATCCATTCCAGAACAATCTCCTGCAGGGCCATCCAGCGCCTCCTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR-3UTR CCA 90 bp | TGGGACCACCAAGGAGGCATAATTGGGCTTGATGGTTTGGGGTGTGTGGAGGGCGTCGCTGGGCCTCTCTaGATCCTCCGAGGATGTGAA | + |
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Preference number: 2 (lower is better) Translates to: WDHQGGIIGLDGLGCVEGVAGPL*ILRGCE Trigger: TTCACATCCTCGGAGGATCCAGAGAGGCCCAGCGAC...GCCCTCCACACACCCCAAACCATCAAGCCCAATTATGCCTCCTTGGTGGTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR-3UTR CCA 90 bp | GGGCAGGGGCTCATGTCAGCAAACATGGCTACATCACATGACACGCCAGCGACACAAAGAAGCCAAAGGTaGGGGCAGGAGGCGCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: GQGLMSANMATSHDTPATQRSQR*GQEALD Trigger: ATCCAGCGCCTCCTGCCCCCACCTTTGGCTTCTTTG...TGTCGCTGGCGTGTCATGTGATGTAGCCATGTTTGCTGACATGAGCCCCTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR-3UTR CCA 90 bp | GGGCAGGGGCTCATGTCAGCAAACATGGCTACATCACATGACACGCCAGCGACATTGGGCTTGATGGTTTaGGGTGTGTGGAGGGCACGC | + |
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Preference number: 2 (lower is better) Translates to: GQGLMSANMATSHDTPATLGLMV*GVWRAR Trigger: GCGTGCCCTCCACACACCCCAAACCATCAAGCCCAA...TGTCGCTGGCGTGTCATGTGATGTAGCCATGTTTGCTGACATGAGCCCCTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR CAA 90 bp | GCTTGGGCCTGGGACCACCAAGGAGGCATAATTGGGCTTGATGGTTaGGGGTGTGTGGAGGGCACGCAGCACACATCTGAGAACATGCAA | + |
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Preference number: 2 (lower is better) Translates to: AWAWDHQGGIIGLDG*GCVEGTQHTSENMQ Trigger: TTGCATGTTCTCAGATGTGTGCTGCGTGCCCTCCACACACCCCAAACCATCAAGCCCAATTATGCCTCCTTGGTGGTCCCAGGCCCAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR-3UTR TCA 90 bp | TGGGACCACCAAGGAGGCATAATTGGGCTTGATGGTTTGGGGTGTGTGGAGGGCTCAGACCACACAGGATaGAGGTGGCAGCAAGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: WDHQGGIIGLDGLGCVEGSDHTG*RWQQEG Trigger: ACCCTCTTGCTGCCACCTTCATCCTGTGTGGTCTGA...GCCCTCCACACACCCCAAACCATCAAGCCCAATTATGCCTCCTTGGTGGTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR-3UTR TCA 90 bp | GGGCAGGAGGCGCTGGATGGCCCTGCAGGAGATTGTTCTGGAATGGATAGGCAGGTGGAGGGCTCTGTCTaGGGAGAAAACTATCACACT | + |
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Preference number: 2 (lower is better) Translates to: GQEALDGPAGDCSGMDRQVEGSV*GENYHT Trigger: AGTGTGATAGTTTTCTCCTCAGACAGAGCCCTCCAC...CTGCCTATCCATTCCAGAACAATCTCCTGCAGGGCCATCCAGCGCCTCCTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR-3UTR GCA 90 bp | TGGGACCACCAAGGAGGCATAATTGGGCTTGATGGTTTGGGGTGTGTGGAGGGCTCACCTGAGGCCCATTaGCGTTCAAAGAGGCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: WDHQGGIIGLDGLGCVEGSPEAH*RSKRQE Trigger: CTCCTGCCTCTTTGAACGGCAATGGGCCTCAGGTGA...GCCCTCCACACACCCCAAACCATCAAGCCCAATTATGCCTCCTTGGTGGTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR-3UTR CCA 90 bp | TCAGAGCTGGCTCAGAGGAGTCTTGTTATCTGGAAGGTCCTATTTGCAGGGCCAGTGCAGCATGGTCGCTaGGCCTCTCTGGATCCTCCG | + |
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Preference number: 2 (lower is better) Translates to: SELAQRSLVIWKVLFAGPVQHGR*ASLDPP Trigger: CGGAGGATCCAGAGAGGCCCAGCGACCATGCTGCAC...TGGCCCTGCAAATAGGACCTTCCAGATAACAAGACTCCTCTGAGCCAGCTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR-3UTR CCA 90 bp | GGTTTGGGGTGTGTGGAGGGCACGCAGCACACATCTGAGAACATGCAACAGACACACACACACACCAGGTaGGCAGGGCTCAAACAGCCA | + |
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Preference number: 2 (lower is better) Translates to: GLGCVEGTQHTSENMQQTHTHTR*AGLKQP Trigger: TGGCTGTTTGAGCCCTGCCCACCTGGTGTGTGTGTG...TGTCTGTTGCATGTTCTCAGATGTGTGCTGCGTGCCCTCCACACACCCCAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR-3UTR TCA 90 bp | TGTATGGGTCTTGTAGAAAGCTGGGTTAGGGCTGACTCTCAGGGACTGCTCATTCTATGTGCGGCAAGGTaGGAGCCAGGGACTCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: CMGLVESWVRADSQGLLILCAAR*EPGTPG Trigger: CCCTGGAGTCCCTGGCTCTCACCTTGCCGCACATAG...AATGAGCAGTCCCTGAGAGTCAGCCCTAACCCAGCTTTCTACAAGACCCATACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR-3UTR GCA 90 bp | GGTTTGGGGTGTGTGGAGGGCACGCAGCACACATCTGAGAACATGCAACAGACAGAGAGTGGCTGGAACTaGCTGGGTCTGTTTTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: GLGCVEGTQHTSENMQQTESGWN*LGLFWE Trigger: CTCCCAAAACAGACCCAGGCAGTTCCAGCCACTCTC...TGTCTGTTGCATGTTCTCAGATGTGTGCTGCGTGCCCTCCACACACCCCAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR-3UTR GCA 90 bp | TGGGACCACCAAGGAGGCATAATTGGGCTTGATGGTTTGGGGTGTGTGGAGGGCCATGTGCCCTCGGCATaGATGTTGGTGTGCATGTGT | + |
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Preference number: 2 (lower is better) Translates to: WDHQGGIIGLDGLGCVEGHVPSA*MLVCMC Trigger: ACACATGCACACCAACATGCATGCCGAGGGCACATG...GCCCTCCACACACCCCAAACCATCAAGCCCAATTATGCCTCCTTGGTGGTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR-3UTR GCA 90 bp | GGTTTGGGGTGTGTGGAGGGCACGCAGCACACATCTGAGAACATGCAACAGACAGGCGCTGGATGGCCCTaGAGGAGATTGTTCTGGAAT | + |
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Preference number: 2 (lower is better) Translates to: GLGCVEGTQHTSENMQQTGAGWP*RRLFWN Trigger: ATTCCAGAACAATCTCCTGCAGGGCCATCCAGCGCC...TGTCTGTTGCATGTTCTCAGATGTGTGCTGCGTGCCCTCCACACACCCCAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR-3UTR CCA 90 bp | GGAATGGATAGGCAGGCTCCCTCCTCAGCACAGCTAATCTGGGGTTACATATATGGACAGGTTGGGCCATaGTGGGCTGCTACAGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: GMDRQAPSSAQLIWGYIYGQVGP*WAATVS Trigger: GCTGACTGTAGCAGCCCACCATGGCCCAACCTGTCC...ATATATGTAACCCCAGATTAGCTGTGCTGAGGAGGGAGCCTGCCTATCCATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR-3UTR CCA 90 bp | TTAATGGGAGTTCTGGCTGGCTGGGCTCAAAGACGCCGGGAACTGGATCCTGAGGAGATTGTTCTGGAATaGATAGGCAGGCTCCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: LMGVLAGWAQRRRELDPEEIVLE*IGRLPP Trigger: AGGAGGGAGCCTGCCTATCCATTCCAGAACAATCTC...CTCAGGATCCAGTTCCCGGCGTCTTTGAGCCCAGCCAGCCAGAACTCCCATTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR-3UTR GCA 90 bp | AGTACACGAGTCTGTGCTAGCTGTCCAAGGCTCAGCTCTACTGTCAGGCAGAAACTGCTGCTATCTATGTaGGGCAAGGTGAGAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: STRVCASCPRLSSTVRQKLLLSM*GKVRAR Trigger: CCTGGCTCTCACCTTGCCGCACATAGATAGCAGCAG...TTTCTGCCTGACAGTAGAGCTGAGCCTTGGACAGCTAGCACAGACTCGTGTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR-3UTR CCA 90 bp | AGTACACGAGTCTGTGCTAGCTGTCCAAGGCTCAGCTCTACTGTCAGGCAGAAAGAGGGTGAGAGTGGCTaGAACTGCCTGGGTCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: STRVCASCPRLSSTVRQKEGESG*NCLGLF Trigger: AAACAGACCCAGGCAGTTCCAGCCACTCTCACCCTC...TTTCTGCCTGACAGTAGAGCTGAGCCTTGGACAGCTAGCACAGACTCGTGTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR CAA 90 bp | ACACACACACACACACACTATCCATGTCTATTCACACAGGACAGGTaGGGCCATGGTGGGCTGCTACAGTCAGCACAGCAGCCAGATAGA | + |
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Preference number: 2 (lower is better) Translates to: THTHTHYPCLFTQDR*GHGGLLQSAQQPDR Trigger: TCTATCTGGCTGCTGTGCTGACTGTAGCAGCCCACCATGGCCCAACCTGTCCTGTGTGAATAGACATGGATAGTGTGTGTGTGTGTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR-3UTR TCA 90 bp | GGGCAGGGGCTCATGTCAGCAAACATGGCTACATCACATGACACGCCAGCGACAATGTGGCTTCTGTTTTaGCAGATGGAGAGGAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: GQGLMSANMATSHDTPATMWLLF*QMERKQ Trigger: TTGCTTCCTCTCCATCTGTCAAAACAGAAGCCACAT...TGTCGCTGGCGTGTCATGTGATGTAGCCATGTTTGCTGACATGAGCCCCTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR-3UTR GCA 90 bp | GGTTTGGGGTGTGTGGAGGGCACGCAGCACACATCTGAGAACATGCAACAGACACACACACACACCTCGTaGAGAAGCCCTTTACATCAT | + |
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Preference number: 2 (lower is better) Translates to: GLGCVEGTQHTSENMQQTHTHTS*RSPLHH Trigger: ATGATGTAAAGGGCTTCTGCACGAGGTGTGTGTGTG...TGTCTGTTGCATGTTCTCAGATGTGTGCTGCGTGCCCTCCACACACCCCAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR-3UTR GCA 90 bp | GGTTTGGGGTGTGTGGAGGGCACGCAGCACACATCTGAGAACATGCAACAGACAATCCCATTTACCTTCTaGCTGCTCCCAAAGAACCCA | + |
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Preference number: 2 (lower is better) Translates to: GLGCVEGTQHTSENMQQTIPFTF*LLPKNP Trigger: TGGGTTCTTTGGGAGCAGGCAGAAGGTAAATGGGAT...TGTCTGTTGCATGTTCTCAGATGTGTGCTGCGTGCCCTCCACACACCCCAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR-3UTR GCA 90 bp | TTAATGGGAGTTCTGGCTGGCTGGGCTCAAAGACGCCGGGAACTGGATCCTGAGGAGTTGTGCTGCAGTTaGGTACACATACACTTCATG | + |
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Preference number: 2 (lower is better) Translates to: LMGVLAGWAQRRRELDPEELCCS*VHIHFM Trigger: CATGAAGTGTATGTGTACGCAACTGCAGCACAACTC...CTCAGGATCCAGTTCCCGGCGTCTTTGAGCCCAGCCAGCCAGAACTCCCATTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR-3UTR CCA 90 bp | TGTATGGGTCTTGTAGAAAGCTGGGTTAGGGCTGACTCTCAGGGACTGCTCATTGTGGCTGGAACTGCCTaGGTCTGTTTTGGGAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: CMGLVESWVRADSQGLLIVAGTA*VCFGSE Trigger: CTCACTCCCAAAACAGACCCAGGCAGTTCCAGCCAC...AATGAGCAGTCCCTGAGAGTCAGCCCTAACCCAGCTTTCTACAAGACCCATACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR-3UTR CCA 90 bp | AAACTGCACAGCTGCCCACCTGATATAAGAGTTCCTCCATTCCTTACTGCCACAGTGTGGCTACCTCTCTaGAACTCCCCAGCCTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: KLHSCPPDIRVPPFLTATVWLPL*NSPASA Trigger: TGCTGAGGCTGGGGAGTTCCAGAGAGGTAGCCACAC...TGTGGCAGTAAGGAATGGAGGAACTCTTATATCAGGTGGGCAGCTGTGCAGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| 3UTR-3UTR TCA 90 bp | GGAATGGATAGGCAGGCTCCCTCCTCAGCACAGCTAATCTGGGGTTACATATATGTTGGTGTGCATGTGTaGTCACGCCTGCTGCTATCT | + |
|
Preference number: 2 (lower is better) Translates to: GMDRQAPSSAQLIWGYIYVGVHV*SRLLLS Trigger: AGATAGCAGCAGGCGTGATCACACATGCACACCAAC...ATATATGTAACCCCAGATTAGCTGTGCTGAGGAGGGAGCCTGCCTATCCATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR-3UTR TCA 90 bp | GGAATGGATAGGCAGGCTCCCTCCTCAGCACAGCTAATCTGGGGTTACATATATCATCAGCTGGGGCAGTaGGGAGAAACCATGGTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: GMDRQAPSSAQLIWGYIYHQLGQ*GETMVS Trigger: AGAAACCATGGTTTCTCCTCACTGCCCCAGCTGATG...ATATATGTAACCCCAGATTAGCTGTGCTGAGGAGGGAGCCTGCCTATCCATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR-3UTR TCA 90 bp | TCAGAGCTGGCTCAGAGGAGTCTTGTTATCTGGAAGGTCCTATTTGCAGGGCCAGCACAGCTGCCCACCTaGTATAAGAGTTCCTCCATT | + |
|
Preference number: 2 (lower is better) Translates to: SELAQRSLVIWKVLFAGPAQLPT*YKSSSI Trigger: AATGGAGGAACTCTTATATCAGGTGGGCAGCTGTGC...TGGCCCTGCAAATAGGACCTTCCAGATAACAAGACTCCTCTGAGCCAGCTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR-3UTR GCA 90 bp | GGGCAGGGGCTCATGTCAGCAAACATGGCTACATCACATGACACGCCAGCGACAGGTCAGTGGAGGAATTaGTTTTGCATTGGGTTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: GQGLMSANMATSHDTPATGQWRN*FCIGFS Trigger: TGAAAACCCAATGCAAAAGCAATTCCTCCACTGACC...TGTCGCTGGCGTGTCATGTGATGTAGCCATGTTTGCTGACATGAGCCCCTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR-3UTR GCA 90 bp | TGGGACCACCAAGGAGGCATAATTGGGCTTGATGGTTTGGGGTGTGTGGAGGGCCATTTACCTTCTGCCTaGTCCCAAAGAACCCATAAA | + |
|
Preference number: 2 (lower is better) Translates to: WDHQGGIIGLDGLGCVEGHLPSA*SQRTHK Trigger: TTTATGGGTTCTTTGGGAGCAGGCAGAAGGTAAATG...GCCCTCCACACACCCCAAACCATCAAGCCCAATTATGCCTCCTTGGTGGTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR-3UTR GCA 90 bp | GGAATGGATAGGCAGGCTCCCTCCTCAGCACAGCTAATCTGGGGTTACATATATCTCCCCGAGTTGTGCTaGAGTTGCGTACACATACAC | + |
|
Preference number: 2 (lower is better) Translates to: GMDRQAPSSAQLIWGYIYLPELC*SCVHIH Trigger: GTGTATGTGTACGCAACTGCAGCACAACTCGGGGAG...ATATATGTAACCCCAGATTAGCTGTGCTGAGGAGGGAGCCTGCCTATCCATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR-3UTR GCA 90 bp | AAACTGCACAGCTGCCCACCTGATATAAGAGTTCCTCCATTCCTTACTGCCACAGCATGCATGTTGGTGTaGATGTGTGATCACGCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: KLHSCPPDIRVPPFLTATACMLV*MCDHAC Trigger: GCAGGCGTGATCACACATGCACACCAACATGCATGC...TGTGGCAGTAAGGAATGGAGGAACTCTTATATCAGGTGGGCAGCTGTGCAGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR-3UTR GCA 90 bp | TGTATGGGTCTTGTAGAAAGCTGGGTTAGGGCTGACTCTCAGGGACTGCTCATTACTATGCTGTTTATGTaGGCAGCCCCAGCACCTATG | + |
|
Preference number: 2 (lower is better) Translates to: CMGLVESWVRADSQGLLITMLFM*AAPAPM Trigger: CATAGGTGCTGGGGCTGCGCACATAAACAGCATAGT...AATGAGCAGTCCCTGAGAGTCAGCCCTAACCCAGCTTTCTACAAGACCCATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR-3UTR CCA 90 bp | TGTATGGGTCTTGTAGAAAGCTGGGTTAGGGCTGACTCTCAGGGACTGCTCATTGTTCAAAGCATCAGCTaGGGCAGTGAGGAGAAACCA | + |
|
Preference number: 2 (lower is better) Translates to: CMGLVESWVRADSQGLLIVQSIS*GSEEKP Trigger: TGGTTTCTCCTCACTGCCCCAGCTGATGCTTTGAAC...AATGAGCAGTCCCTGAGAGTCAGCCCTAACCCAGCTTTCTACAAGACCCATACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR-3UTR GCA 90 bp | AGGCTTCCACGTGCTTCCCCTGAACTCCAAGACCCAACACACACACACACACACTGGAGGAATTGCTTTTaGATTGGGTTTTCACACTCA | + |
|
Preference number: 2 (lower is better) Translates to: RLPRASPELQDPTHTHTHWRNCF*IGFSHS Trigger: TGAGTGTGAAAACCCAATGCAAAAGCAATTCCTCCA...GTGTGTGTGTGTGTGTGTTGGGTCTTGGAGTTCAGGGGAAGCACGTGGAAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR-3UTR CCA 90 bp | GGTTTGGGGTGTGTGGAGGGCACGCAGCACACATCTGAGAACATGCAACAGACAGAATTGCTTTTGCATTaGGTTTTCACACTCACAAAA | + |
|
Preference number: 2 (lower is better) Translates to: GLGCVEGTQHTSENMQQTELLLH*VFTLTK Trigger: TTTTGTGAGTGTGAAAACCCAATGCAAAAGCAATTC...TGTCTGTTGCATGTTCTCAGATGTGTGCTGCGTGCCCTCCACACACCCCAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR-3UTR CCA 90 bp | TGTATGGGTCTTGTAGAAAGCTGGGTTAGGGCTGACTCTCAGGGACTGCTCATTAGGAGAGAAGGTCAGTaGAGGAATTGCTTTTGCATT | + |
|
Preference number: 2 (lower is better) Translates to: CMGLVESWVRADSQGLLIRREGQ*RNCFCI Trigger: AATGCAAAAGCAATTCCTCCACTGACCTTCTCTCCT...AATGAGCAGTCCCTGAGAGTCAGCCCTAACCCAGCTTTCTACAAGACCCATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR-3UTR TCA 90 bp | TGTATGGGTCTTGTAGAAAGCTGGGTTAGGGCTGACTCTCAGGGACTGCTCATTAGAAACAGAAAAGTATaGATGTGGGTCTGTGTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: CMGLVESWVRADSQGLLIRNRKV*MWVCVS Trigger: GGAAACACAGACCCACATTCATACTTTTCTGTTTCT...AATGAGCAGTCCCTGAGAGTCAGCCCTAACCCAGCTTTCTACAAGACCCATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR-3UTR CCA 90 bp | AAACTGCACAGCTGCCCACCTGATATAAGAGTTCCTCCATTCCTTACTGCCACATGTACATACACTGTATaGGCACAGATCTACACACAC | + |
|
Preference number: 2 (lower is better) Translates to: KLHSCPPDIRVPPFLTATCTYTV*AQIYTH Trigger: GTGTGTGTAGATCTGTGCCCATACAGTGTATGTACA...TGTGGCAGTAAGGAATGGAGGAACTCTTATATCAGGTGGGCAGCTGTGCAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR CAA 90 bp | TCCAGATGTAGCAGACAGGAGAGAAGGTCAGTGGAGGAATTGCTTTaGCATTGGGTTTTCACACTCACAAAATTCAATGTACATACACTG | + |
|
Preference number: 2 (lower is better) Translates to: SRCSRQERRSVEELL*HWVFTLTKFNVHTL Trigger: CAGTGTATGTACATTGAATTTTGTGAGTGTGAAAACCCAATGCAAAAGCAATTCCTCCACTGACCTTCTCTCCTGTCTGCTACATCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR GCA 72 bp | ATGTGCGGCAAGGTGAGAGCCAGGGACTCCAGGGTCTaGATGAGGGTGAGAGTGGCTGGAACTGCCTGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: MCGKVRARDSRV*MRVRVAGTAWV Trigger: GACCCAGGCAGTTCCAGCCACTCTCACCCTCATGCAGACCCTGGAGTCCCTGGCTCTCACCTTGCCGCACAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR GCA 72 bp | GGGGTGTCCACACGTCTTGAGCATGTGCCCTCGGCATaGATGTTGGTGTGCATGTGTGATCACGCCTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GVSTRLEHVPSA*MLVCMCDHACC Trigger: GCAGCAGGCGTGATCACACATGCACACCAACATGCATGCCGAGGGCACATGCTCAAGACGTGTGGACACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR-3UTR CAA 90 bp | GGGCAGGGGCTCATGTCAGCAAACATGGCTACATCACATGACACGCCAGCGACAGGGTGTCCACACGTCTaGAGCATGTGCCCTCGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: GQGLMSANMATSHDTPATGCPHV*SMCPRH Trigger: ATGCCGAGGGCACATGCTCAAGACGTGTGGACACCC...TGTCGCTGGCGTGTCATGTGATGTAGCCATGTTTGCTGACATGAGCCCCTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR TCA 72 bp | GGGTTAGGGCTGACTCTCAGGGACTGCTCATTCACCTaGGGCCCATTGCCGTTCAAAGAGGCAGGAGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GLGLTLRDCSFT*GPLPFKEAGAA Trigger: TGCTGCTCCTGCCTCTTTGAACGGCAATGGGCCTCAGGTGAATGAGCAGTCCCTGAGAGTCAGCCCTAACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR GCA 72 bp | GGTGTGTGGAGGGCACGCAGCACACATCTGAGAACATaGAACAGACACCAGCCCCCAGACAACCATCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GVWRARSTHLRT*NRHQPPDNHPG Trigger: TCCTGGATGGTTGTCTGGGGGCTGGTGTCTGTTGCATGTTCTCAGATGTGTGCTGCGTGCCCTCCACACACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR CCA 72 bp | GTGCGCAGCCCCAGCACCTATGTGTGGCTACCTCTCTaGAACTCCCCAGCCTCAGCATTCATGAGTACACGA | + |
|
Preference number: 3 (lower is better) Translates to: VRSPSTYVWLPL*NSPASAFMSTR Trigger: TCGTGTACTCATGAATGCTGAGGCTGGGGAGTTCCAGAGAGGTAGCCACACATAGGTGCTGGGGCTGCGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR CCA 72 bp | AGAAGGGAGCTAGGGGCCGACCATCTTGTCCTCTGTTaGGTAGGTAGGGCAGGGCGAGTGCATAGAACACAC | + |
|
Preference number: 3 (lower is better) Translates to: RRELGADHLVLC*VGRAGRVHRTH Trigger: GTGTGTTCTATGCACTCGCCCTGCCCTACCTACCCAACAGAGGACAAGATGGTCGGCCCCTAGCTCCCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR-3UTR CAA 90 bp | GGGCAGGGGCTCATGTCAGCAAACATGGCTACATCACATGACACGCCAGCGACATCTGGAAGGTCCTATTaGCAGGGCCACTCCCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: GQGLMSANMATSHDTPATSGRSY*QGHSLL Trigger: GAGAAGGGAGTGGCCCTGCAAATAGGACCTTCCAGA...TGTCGCTGGCGTGTCATGTGATGTAGCCATGTTTGCTGACATGAGCCCCTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR TCA 72 bp | GCATGTGCCCTCGGCATGCATGTTGGTGTGCATGTGTaGTCACGCCTGCTGCTATCTATGTGCGGCAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: ACALGMHVGVHV*SRLLLSMCGKV Trigger: CACCTTGCCGCACATAGATAGCAGCAGGCGTGATCACACATGCACACCAACATGCATGCCGAGGGCACATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR GCA 72 bp | ACACACACGCTGGGGTGTCCACACGTCTTGAGCATGTaGCCTCGGCATGCATGTTGGTGTGCATGTGTGATC | + |
|
Preference number: 3 (lower is better) Translates to: THTLGCPHVLSM*PRHACWCACVI Trigger: GATCACACATGCACACCAACATGCATGCCGAGGGCACATGCTCAAGACGTGTGGACACCCCAGCGTGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR CCA 72 bp | CTAGAAACATCTGGGTTAATGGGAGTTCTGGCTGGCTaGGCTCAAAGACGCCGGGAACTGGATCCTGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LETSGLMGVLAG*AQRRRELDPEA Trigger: GGCCTCAGGATCCAGTTCCCGGCGTCTTTGAGCCCAGCCAGCCAGAACTCCCATTAACCCAGATGTTTCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR CCA 72 bp | CATGACTGGGGTGTCGGGGAGGCCACTAGAAACATCTaGGTTAATGGGAGTTCTGGCTGGCTGGGCTCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: HDWGVGEATRNI*VNGSSGWLGSK Trigger: CTTTGAGCCCAGCCAGCCAGAACTCCCATTAACCCAGATGTTTCTAGTGGCCTCCCCGACACCCCAGTCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR CCA 72 bp | TGGCAGCCACAGTCCTGTCCTTGTGAACACCATGACTaGGGTGTCGGGGAGGCCACTAGAAACATCTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: WQPQSCPCEHHD*GVGEATRNIWV Trigger: AACCCAGATGTTTCTAGTGGCCTCCCCGACACCCCAGTCATGGTGTTCACAAGGACAGGACTGTGGCTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR TCA 72 bp | ACACAAGTACACACACGCTGGGGTGTCCACACGTCTTaGGCATGTGCCCTCGGCATGCATGTTGGTGTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: TQVHTRWGVHTS*ACALGMHVGVH Trigger: ATGCACACCAACATGCATGCCGAGGGCACATGCTCAAGACGTGTGGACACCCCAGCGTGTGTGTACTTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR TCA 72 bp | GGCTACCTCTCTGGAACTCCCCAGCCTCAGCATTCATaGGTACACGAGTCTGTGCTAGCTGTCCAAGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: GYLSGTPQPQHS*VHESVLAVQGS Trigger: TGAGCCTTGGACAGCTAGCACAGACTCGTGTACTCATGAATGCTGAGGCTGGGGAGTTCCAGAGAGGTAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR GCA 72 bp | CGTCTTGAGCATGTGCCCTCGGCATGCATGTTGGTGTaGATGTGTGATCACGCCTGCTGCTATCTATGTGCG | + |
|
Preference number: 3 (lower is better) Translates to: RLEHVPSACMLV*MCDHACCYLCA Trigger: CGCACATAGATAGCAGCAGGCGTGATCACACATGCACACCAACATGCATGCCGAGGGCACATGCTCAAGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR GCA 72 bp | TGGGCAGGGCTCAAACAGCCAGGCAGGGAAGAGATCTaGTGTCAGAGCTGGCTCAGAGGAGTCTTGTTATCT | + |
|
Preference number: 3 (lower is better) Translates to: WAGLKQPGREEI*CQSWLRGVLLS Trigger: AGATAACAAGACTCCTCTGAGCCAGCTCTGACAGCAGATCTCTTCCCTGCCTGGCTGTTTGAGCCCTGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR CCA 72 bp | TATGCTGTTTATGTGCGCAGCCCCAGCACCTATGTGTaGCTACCTCTCTGGAACTCCCCAGCCTCAGCATTC | + |
|
Preference number: 3 (lower is better) Translates to: YAVYVRSPSTYV*LPLWNSPASAF Trigger: GAATGCTGAGGCTGGGGAGTTCCAGAGAGGTAGCCACACATAGGTGCTGGGGCTGCGCACATAAACAGCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR-3UTR CAA 90 bp | TCAGAGCTGGCTCAGAGGAGTCTTGTTATCTGGAAGGTCCTATTTGCAGGGCCACTGCCTGGGTCTGTTTaGGGAGTGAGCTTGGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SELAQRSLVIWKVLFAGPLPGSV*GVSLEQ Trigger: CTGCTCCAAGCTCACTCCCAAAACAGACCCAGGCAG...TGGCCCTGCAAATAGGACCTTCCAGATAACAAGACTCCTCTGAGCCAGCTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR-3UTR CAA 90 bp | AGTACACGAGTCTGTGCTAGCTGTCCAAGGCTCAGCTCTACTGTCAGGCAGAAATTCACACAGGACAGGTaGGGCCATGGTGGGCTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: STRVCASCPRLSSTVRQKFTQDR*GHGGLL Trigger: TAGCAGCCCACCATGGCCCAACCTGTCCTGTGTGAA...TTTCTGCCTGACAGTAGAGCTGAGCCTTGGACAGCTAGCACAGACTCGTGTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR CCA 72 bp | ACACACACTATCCATGTCTATTCACACAGGACAGGTTaGGCCATGGTGGGCTGCTACAGTCAGCACAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: THTIHVYSHRTG*AMVGCYSQHSS Trigger: GCTGCTGTGCTGACTGTAGCAGCCCACCATGGCCCAACCTGTCCTGTGTGAATAGACATGGATAGTGTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTTCCACGTGCTTCCCCTGAACTCCAAGACCCAACACACACACACACACACGTTTTGGGAGTGAGCTaGGAGCAGGGAAAAGGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: RLPRASPELQDPTHTHTHVLGVS*EQGKGE Trigger: TTCACCTTTTCCCTGCTCCAAGCTCACTCCCAAAAC...GTGTGTGTGTGTGTGTGTTGGGTCTTGGAGTTCAGGGGAAGCACGTGGAAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR TCA 72 bp | GAGTTGTGCTGCAGTTGCGTACACATACACTTCATGTaGCTACCCTACTCCAGGGCAGGACACACACTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: ELCCSCVHIHFM*LPYSRAGHTLL Trigger: GAGGAGTGTGTGTCCTGCCCTGGAGTAGGGTAGTCACATGAAGTGTATGTGTACGCAACTGCAGCACAACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR CCA 72 bp | ACACCAGCCCCCAGACAACCATCCAGGATACACATGTaGACAGCAGTCAACAAGCATGTCCATCCTGTGATG | + |
|
Preference number: 3 (lower is better) Translates to: TPAPRQPSRIHM*TAVNKHVHPVM Trigger: CATCACAGGATGGACATGCTTGTTGACTGCTGTCCACATGTGTATCCTGGATGGTTGTCTGGGGGCTGGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR TCA 72 bp | CGAGTGCATAGAACACACGTGTACACGCTCAAGGTATaGTGGGAGCATGATGACCCATGGGCACAAGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: RVHRTHVYTLKV*WEHDDPWAQEM Trigger: CATCTCTTGTGCCCATGGGTCATCATGCTCCCATCATACCTTGAGCGTGTACACGTGTGTTCTATGCACTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR CCA 72 bp | TCTGTGTTTCCGCATCAGACGGTCGCACACTTTCGATaGAGCAGTGGATGTGGCTTCTGTTTTGACAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: SVFPHQTVAHFR*SSGCGFCFDRW Trigger: CCATCTGTCAAAACAGAAGCCACATCCACTGCTCCATCGAAAGTGTGCGACCGTCTGATGCGGAAACACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR CCA 72 bp | AAACAGCCAGGCAGGGAAGAGATCTGCTGTCAGAGCTaGCTCAGAGGAGTCTTGTTATCTGGAAGGTCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: KQPGREEICCQS*LRGVLLSGRSY Trigger: ATAGGACCTTCCAGATAACAAGACTCCTCTGAGCCAGCTCTGACAGCAGATCTCTTCCCTGCCTGGCTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR CCA 72 bp | TATGATGGGAGCATGATGACCCATGGGCACAAGAGATaGACACGCAGTGTGCTTTGTAAGAGGCAAGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: YDGSMMTHGHKR*TRSVLCKRQGR Trigger: CCTTCCTTGCCTCTTACAAAGCACACTGCGTGTCCATCTCTTGTGCCCATGGGTCATCATGCTCCCATCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR CCA 72 bp | GAAAAAGAGAAGGGCAGGGGCTCATGTCAGCAAACATaGCTACATCACATGACACGCCAGCGACACAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: EKEKGRGSCQQT*LHHMTRQRHRN Trigger: GTTTCTGTGTCGCTGGCGTGTCATGTGATGTAGCCATGTTTGCTGACATGAGCCCCTGCCCTTCTCTTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTTCCACGTGCTTCCCCTGAACTCCAAGACCCAACACACACACACACACACGGAATTGCTTTTGCATaGGGTTTTCACACTCACAAA | + |
|
Preference number: 3 (lower is better) Translates to: RLPRASPELQDPTHTHTHGIAFA*GFHTHK Trigger: TTTGTGAGTGTGAAAACCCAATGCAAAAGCAATTCC...GTGTGTGTGTGTGTGTGTTGGGTCTTGGAGTTCAGGGGAAGCACGTGGAAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR TCA 72 bp | ACATGTGGACAGCAGTCAACAAGCATGTCCATCCTGTaGTGTATGGGTCTTGTAGAAAGCTGGGTTAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: TCGQQSTSMSIL*CMGLVESWVRA Trigger: AGCCCTAACCCAGCTTTCTACAAGACCCATACATCACAGGATGGACATGCTTGTTGACTGCTGTCCACATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR CCA 72 bp | CCCACTCCAGATGTAGCAGACAGGAGAGAAGGTCAGTaGAGGAATTGCTTTTGCATTGGGTTTTCACACTCA | + |
|
Preference number: 3 (lower is better) Translates to: PTPDVADRREGQ*RNCFCIGFSHS Trigger: TGAGTGTGAAAACCCAATGCAAAAGCAATTCCTCCACTGACCTTCTCTCCTGTCTGCTACATCTGGAGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR-3UTR CAA 90 bp | TGTATGGGTCTTGTAGAAAGCTGGGTTAGGGCTGACTCTCAGGGACTGCTCATTAGGTCAGTGGAGGAATaGCTTTTGCATTGGGTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: CMGLVESWVRADSQGLLIRSVEE*LLHWVF Trigger: GAAAACCCAATGCAAAAGCAATTCCTCCACTGACCT...AATGAGCAGTCCCTGAGAGTCAGCCCTAACCCAGCTTTCTACAAGACCCATACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR-3UTR CAA 90 bp | AAACTGCACAGCTGCCCACCTGATATAAGAGTTCCTCCATTCCTTACTGCCACAGATGTGGCTTCTGTTTaGACAGATGGAGAGGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: KLHSCPPDIRVPPFLTATDVASV*TDGEEA Trigger: TGCTTCCTCTCCATCTGTCAAAACAGAAGCCACATC...TGTGGCAGTAAGGAATGGAGGAACTCTTATATCAGGTGGGCAGCTGTGCAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS-3UTR TCA 90 bp | TTAATGGGAGTTCTGGCTGGCTGGGCTCAAAGACGCCGGGAACTGGATCCTGAGCTCCACGAACTTCCGTaGGAGTGTGGAGTGCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LMGVLAGWAQRRRELDPELHELP*ECGVLG Trigger: ACCCAGCACTCCACACTCTCACGGAAGTTCGTGGAG...CTCAGGATCCAGTTCCCGGCGTCTTTGAGCCCAGCCAGCCAGAACTCCCATTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS-3UTR GCA 90 bp | CTGACATCTCCAAAGAAGCCAAAGGTGGGGGCAGGAGGCGCTGGATGGCCCTGCCAGACAGTTTCTCGATaGAGCCTCGGATCTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTSPKKPKVGAGGAGWPCQTVSR*SLGSLP Trigger: TGGAAGAGATCCGAGGCTGCATCGAGAAACTGTCTG...GCAGGGCCATCCAGCGCCTCCTGCCCCCACCTTTGGCTTCTTTGGAGATGTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR CAA 72 bp | TGGGACCACCAAGGAGGCATAATTGGGCTTGATGGTTaGGGGTGTGTGGAGGGCACGCAGCACACATCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: WDHQGGIIGLDG*GCVEGTQHTSE Trigger: CTCAGATGTGTGCTGCGTGCCCTCCACACACCCCAAACCATCAAGCCCAATTATGCCTCCTTGGTGGTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR CAA 72 bp | GCAAGGAAGGGGAGAATGGAAGCATTGAGTCCTGGCTaGGGCCTGGGACCACCAAGGAGGCATAATTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ARKGRMEALSPG*GLGPPRRHNWA Trigger: AGCCCAATTATGCCTCCTTGGTGGTCCCAGGCCCAAGCCAGGACTCAATGCTTCCATTCTCCCCTTCCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR CAA 72 bp | TGGCTCAGAGGAGTCTTGTTATCTGGAAGGTCCTATTaGCAGGGCCACTCCCTTCTCCCCGAGTTGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WLRGVLLSGRSY*QGHSLLPELCC Trigger: GCAGCACAACTCGGGGAGAAGGGAGTGGCCCTGCAAATAGGACCTTCCAGATAACAAGACTCCTCTGAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS-3UTR TCA 90 bp | CCTGCTGCTATCTATGTGCGGCAAGGTGAGAGCCAGGGACTCCAGGGTCTGCATTCCCGGTACTTGGACTaGGTTGCATTATATTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PAAIYVRQGESQGLQGLHSRYLD*VALYSV Trigger: GACCGAATATAATGCAACTCAGTCCAAGTACCGGGA...ATGCAGACCCTGGAGTCCCTGGCTCTCACCTTGCCGCACATAGATAGCAGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS-3UTR GCA 90 bp | GGGCAGGAGGCGCTGGATGGCCCTGCAGGAGATTGTTCTGGAATGGATAGGCAGTGCTGTTTCTTCACTTaGTCCACATCCTCAGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: GQEALDGPAGDCSGMDRQCCFFT*STSSDS Trigger: ACTGTCTGAGGATGTGGAGCAAGTGAAGAAACAGCA...CTGCCTATCCATTCCAGAACAATCTCCTGCAGGGCCATCCAGCGCCTCCTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS-3UTR GCA 90 bp | TTAATGGGAGTTCTGGCTGGCTGGGCTCAAAGACGCCGGGAACTGGATCCTGAGTTCAGCCCCTCTTCCTaGTCAATGCTTTGCTCGATC | + |
|
Preference number: 4 (lower is better) Translates to: LMGVLAGWAQRRRELDPEFSPSS*SMLCSI Trigger: GATCGAGCAAAGCATTGAGCAGGAAGAGGGGCTGAA...CTCAGGATCCAGTTCCCGGCGTCTTTGAGCCCAGCCAGCCAGAACTCCCATTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS-3UTR GCA 90 bp | TCAGAGCTGGCTCAGAGGAGTCTTGTTATCTGGAAGGTCCTATTTGCAGGGCCATCTGGATTCGGTCCTTaGAGCGGTCCCGGTACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SELAQRSLVIWKVLFAGPSGFGP*SGPGTW Trigger: CCAAGTACCGGGACCGCTGCAAGGACCGAATCCAGA...TGGCCCTGCAAATAGGACCTTCCAGATAACAAGACTCCTCTGAGCCAGCTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS-3UTR GCA 90 bp | GAGAGAGGTAGACAGACAAATGAAGGGACCGTTGGGGTGTGGGACATGAGGAAAACTGATCTTTTGGCCTaGCCCCCTGCTTCAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ERGRQTNEGTVGVWDMRKTDLLA*PPASGS Trigger: GCTGCCTGAAGCAGGGGGGCAGGCCAAAAGATCAGT...TTTCCTCATGTCCCACACCCCAACGGTCCCTTCATTTGTCTGTCTACCTCTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000156135.3 |
||
| CDS-3UTR CCA 90 bp | AGGCTTCCACGTGCTTCCCCTGAACTCCAAGACCCAACACACACACACACACACTGGTCTCGATCCACGTaGACCACCTCCTCTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RLPRASPELQDPTHTHTHWSRST*TTSSSS Trigger: TGATGAAGAGGAGGTGGTCCACGTGGATCGAGACCA...GTGTGTGTGTGTGTGTGTTGGGTCTTGGAGTTCAGGGGAAGCACGTGGAAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS-3UTR CCA 90 bp | GGTTTGGGGTGTGTGGAGGGCACGCAGCACACATCTGAGAACATGCAACAGACAACTTCCGTGAGAGTGTaGAGTGCTGGGTCTTACGGA | + |
|
Preference number: 4 (lower is better) Translates to: GLGCVEGTQHTSENMQQTTSVRV*SAGSYG Trigger: TCCGTAAGACCCAGCACTCCACACTCTCACGGAAGT...TGTCTGTTGCATGTTCTCAGATGTGTGCTGCGTGCCCTCCACACACCCCAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS-3UTR CCA 90 bp | GGGCAGGGGCTCATGTCAGCAAACATGGCTACATCACATGACACGCCAGCGACAGGCTCTCTACGAGCATaGCCATGTCCACAAACATGT | + |
|
Preference number: 4 (lower is better) Translates to: GQGLMSANMATSHDTPATGSLRA*PCPQTC Trigger: ACATGTTTGTGGACATGGCCATGCTCGTAGAGAGCC...TGTCGCTGGCGTGTCATGTGATGTAGCCATGTTTGCTGACATGAGCCCCTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR CAA 72 bp | CACACACACTATCCATGTCTATTCACACAGGACAGGTaGGGCCATGGTGGGCTGCTACAGTCAGCACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HTHYPCLFTQDR*GHGGLLQSAQQ Trigger: CTGCTGTGCTGACTGTAGCAGCCCACCATGGCCCAACCTGTCCTGTGTGAATAGACATGGATAGTGTGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS-3UTR GCA 90 bp | TGGGACCACCAAGGAGGCATAATTGGGCTTGATGGTTTGGGGTGTGTGGAGGGCCCTCTTCCTGCTCAATaGTTTGCTCGATCGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: WDHQGGIIGLDGLGCVEGPLPAQ*FARSLS Trigger: TGAAAGCGATCGAGCAAAGCATTGAGCAGGAAGAGG...GCCCTCCACACACCCCAAACCATCAAGCCCAATTATGCCTCCTTGGTGGTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS-3UTR CCA 90 bp | AGTACACGAGTCTGTGCTAGCTGTCCAAGGCTCAGCTCTACTGTCAGGCAGAAATCGATCATCTCACCCTaGCTCTCTACGAGCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: STRVCASCPRLSSTVRQKSIISP*LSTSMA Trigger: GGCCATGCTCGTAGAGAGCCAGGGTGAGATGATCGA...TTTCTGCCTGACAGTAGAGCTGAGCCTTGGACAGCTAGCACAGACTCGTGTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS-3UTR CCA 90 bp | GAGAGAGGTAGACAGACAAATGAAGGGACCGTTGGGGTGTGGGACATGAGGAAATCGATCATCTCACCCTaGCTCTCTACGAGCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ERGRQTNEGTVGVWDMRKSIISP*LSTSMA Trigger: GGCCATGCTCGTAGAGAGCCAGGGTGAGATGATCGA...TTTCCTCATGTCCCACACCCCAACGGTCCCTTCATTTGTCTGTCTACCTCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156135.3 |
||
| 3UTR CAA 72 bp | GAAGAGATCTGCTGTCAGAGCTGGCTCAGAGGAGTCTaGTTATCTGGAAGGTCCTATTTGCAGGGCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: EEICCQSWLRGV*LSGRSYLQGHS Trigger: GGAGTGGCCCTGCAAATAGGACCTTCCAGATAACAAGACTCCTCTGAGCCAGCTCTGACAGCAGATCTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS-3UTR GCA 90 bp | AGGCTTCCACGTGCTTCCCCTGAACTCCAAGACCCAACACACACACACACACACTCCACAAACATGTCGTaGAGCTCTCGAATGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RLPRASPELQDPTHTHTHSTNMS*SSRMLV Trigger: AACCAGCATTCGAGAGCTGCACGACATGTTTGTGGA...GTGTGTGTGTGTGTGTGTTGGGTCTTGGAGTTCAGGGGAAGCACGTGGAAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS-3UTR GCA 90 bp | TCAGAGCTGGCTCAGAGGAGTCTTGTTATCTGGAAGGTCCTATTTGCAGGGCCAGGACCGGACCTTGTTTaGCGTCTTTTTGATGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SELAQRSLVIWKVLFAGPGPDLV*RLFDVC Trigger: GCAGACATCAAAAAGACGGCAAACAAGGTCCGGTCC...TGGCCCTGCAAATAGGACCTTCCAGATAACAAGACTCCTCTGAGCCAGCTCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS-3UTR CCA 90 bp | GAGAGAGGTAGACAGACAAATGAAGGGACCGTTGGGGTGTGGGACATGAGGAAAGGCTCTCTACGAGCATaGCCATGTCCACAAACATGT | + |
|
Preference number: 4 (lower is better) Translates to: ERGRQTNEGTVGVWDMRKGSLRA*PCPQTC Trigger: ACATGTTTGTGGACATGGCCATGCTCGTAGAGAGCC...TTTCCTCATGTCCCACACCCCAACGGTCCCTTCATTTGTCTGTCTACCTCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156135.3 |
||
| CDS-3UTR GCA 90 bp | TGTATGGGTCTTGTAGAAAGCTGGGTTAGGGCTGACTCTCAGGGACTGCTCATTGCAAGAATGGCGCTGTaGTGTTTCTTCACTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CMGLVESWVRADSQGLLIARMAL*CFFTCS Trigger: GGAGCAAGTGAAGAAACAGCACAGCGCCATTCTTGC...AATGAGCAGTCCCTGAGAGTCAGCCCTAACCCAGCTTTCTACAAGACCCATACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS-3UTR GCA 90 bp | TTAATGGGAGTTCTGGCTGGCTGGGCTCAAAGACGCCGGGAACTGGATCCTGAGGCTTGCTTTGTCATCTaGGAGTCCATTTTGATATCA | + |
|
Preference number: 4 (lower is better) Translates to: LMGVLAGWAQRRRELDPEACFVI*ESILIS Trigger: TGATATCAAAATGGACTCGCAGATGACAAAGCAAGC...CTCAGGATCCAGTTCCCGGCGTCTTTGAGCCCAGCCAGCCAGAACTCCCATTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS-3UTR GCA 90 bp | GAGAGAGGTAGACAGACAAATGAAGGGACCGTTGGGGTGTGGGACATGAGGAAATCCACAAACATGTCGTaGAGCTCTCGAATGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ERGRQTNEGTVGVWDMRKSTNMS*SSRMLV Trigger: AACCAGCATTCGAGAGCTGCACGACATGTTTGTGGA...TTTCCTCATGTCCCACACCCCAACGGTCCCTTCATTTGTCTGTCTACCTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156135.3 |
||
| CDS-3UTR GCA 90 bp | AGTACACGAGTCTGTGCTAGCTGTCCAAGGCTCAGCTCTACTGTCAGGCAGAAATCTTCCTCCTGGCCTTaGTCTGATACTTCACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: STRVCASCPRLSSTVRQKSSSWP*SDTSQL Trigger: AAGCTGTGAAGTATCAGAGCAAGGCCAGGAGGAAGA...TTTCTGCCTGACAGTAGAGCTGAGCCTTGGACAGCTAGCACAGACTCGTGTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS-3UTR GCA 90 bp | GAGAGAGGTAGACAGACAAATGAAGGGACCGTTGGGGTGTGGGACATGAGGAAATTACCCTCCTGGCCTTaGTCTGATACTTCACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ERGRQTNEGTVGVWDMRKLPSWP*SDTSQL Trigger: AAGCTGTGAAGTATCAGAGCAAGGCCAGGAGGGTAA...TTTCCTCATGTCCCACACCCCAACGGTCCCTTCATTTGTCTGTCTACCTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156135.3 |
||
| CDS-3UTR GCA 90 bp | TCAGAGCTGGCTCAGAGGAGTCTTGTTATCTGGAAGGTCCTATTTGCAGGGCCAATCTCATTCAGAGCTTaGTTTGTCATCTGCGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SELAQRSLVIWKVLFAGPISFRA*FVICES Trigger: GGACTCGCAGATGACAAAGCAAGCTCTGAATGAGAT...TGGCCCTGCAAATAGGACCTTCCAGATAACAAGACTCCTCTGAGCCAGCTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS-3UTR GCA 90 bp | GAGAGAGGTAGACAGACAAATGAAGGGACCGTTGGGGTGTGGGACATGAGGAAAATCTCATTCAGAGCTTaGTTTGTCATCTGCGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ERGRQTNEGTVGVWDMRKISFRA*FVICES Trigger: GGACTCGCAGATGACAAAGCAAGCTCTGAATGAGAT...TTTCCTCATGTCCCACACCCCAACGGTCCCTTCATTTGTCTGTCTACCTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156135.3 |
||
| CDS-3UTR CCA 90 bp | GGAATGGATAGGCAGGCTCCCTCCTCAGCACAGCTAATCTGGGGTTACATATATAGCGGTCCCGGTACTTaGACTGAGTTGCATTATATT | + |
|
Preference number: 4 (lower is better) Translates to: GMDRQAPSSAQLIWGYIYSGPGT*TELHYI Trigger: AATATAATGCAACTCAGTCCAAGTACCGGGACCGCT...ATATATGTAACCCCAGATTAGCTGTGCTGAGGAGGGAGCCTGCCTATCCATTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS-3UTR GCA 90 bp | GAGAGAGGTAGACAGACAAATGAAGGGACCGTTGGGGTGTGGGACATGAGGAAAGCTTGCTTTGTCATCTaGGAGTCCATTTTGATATCA | + |
|
Preference number: 4 (lower is better) Translates to: ERGRQTNEGTVGVWDMRKACFVI*ESILIS Trigger: TGATATCAAAATGGACTCGCAGATGACAAAGCAAGC...TTTCCTCATGTCCCACACCCCAACGGTCCCTTCATTTGTCTGTCTACCTCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156135.3 |
||
| CDS-3UTR GCA 90 bp | GAGAGAGGTAGACAGACAAATGAAGGGACCGTTGGGGTGTGGGACATGAGGAAATTGATGATCTCATTGTaGCTTGTCTCGATCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: ERGRQTNEGTVGVWDMRKLMISL*LVSISF Trigger: GAATGAGATCGAGACAAGGCACAATGAGATCATCAA...TTTCCTCATGTCCCACACCCCAACGGTCCCTTCATTTGTCTGTCTACCTCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156135.3 |
||
| CDS-3UTR GCA 90 bp | TGTATGGGTCTTGTAGAAAGCTGGGTTAGGGCTGACTCTCAGGGACTGCTCATTTTGATGATCTCATTGTaGCTTGTCTCGATCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: CMGLVESWVRADSQGLLILMISL*LVSISF Trigger: GAATGAGATCGAGACAAGGCACAATGAGATCATCAA...AATGAGCAGTCCCTGAGAGTCAGCCCTAACCCAGCTTTCTACAAGACCCATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS-3UTR GCA 90 bp | GGAATGGATAGGCAGGCTCCCTCCTCAGCACAGCTAATCTGGGGTTACATATATGTACTTGGACTGAGTTaGATTATATTCGGTCATTAC | + |
|
Preference number: 4 (lower is better) Translates to: GMDRQAPSSAQLIWGYIYVLGLS*IIFGHY Trigger: GTAATGACCGAATATAATGCAACTCAGTCCAAGTAC...ATATATGTAACCCCAGATTAGCTGTGCTGAGGAGGGAGCCTGCCTATCCATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| 3UTR CAA 72 bp | AGCAGACAGGAGAGAAGGTCAGTGGAGGAATTGCTTTaGCATTGGGTTTTCACACTCACAAAATTCAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: SRQERRSVEELL*HWVFTLTKFNV Trigger: TACATTGAATTTTGTGAGTGTGAAAACCCAATGCAAAAGCAATTCCTCCACTGACCTTCTCTCCTGTCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS-3UTR CAA 90 bp | GGTTTGGGGTGTGTGGAGGGCACGCAGCACACATCTGAGAACATGCAACAGACACTCTGGATTCGGTCCTaGCAGCGGTCCCGGTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: GLGCVEGTQHTSENMQQTLWIRS*QRSRYL Trigger: CAAGTACCGGGACCGCTGCAAGGACCGAATCCAGAG...TGTCTGTTGCATGTTCTCAGATGTGTGCTGCGTGCCCTCCACACACCCCAAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS GCA 90 bp | TTACGGATGCGCAGGTCCGCAGAGGAACGATTCAGCCCCTCTTCCTaGTCAATGCTTTGCTCGATCGCTTTCAACTTGGACCGGACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LRMRRSAEERFSPSS*SMLCSIAFNLDRTL Trigger: CAAGGTCCGGTCCAAGTTGAAAGCGATCGAGCAAAGCATTGAGCAGGAAGAGGGGCTGAATCGTTCCTCTGCGGACCTGCGCATCCGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS-3UTR CAA 90 bp | CTGACATCTCCAAAGAAGCCAAAGGTGGGGGCAGGAGGCGCTGGATGGCCCTGCGGTACTTGGACTGAGTaGCATTATATTCGGTCATTA | + |
|
Preference number: 5 (lower is better) Translates to: LTSPKKPKVGAGGAGWPCGTWTE*HYIRSL Trigger: TAATGACCGAATATAATGCAACTCAGTCCAAGTACC...GCAGGGCCATCCAGCGCCTCCTGCCCCCACCTTTGGCTTCTTTGGAGATGTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS-3UTR CAA 90 bp | TTAATGGGAGTTCTGGCTGGCTGGGCTCAAAGACGCCGGGAACTGGATCCTGAGACGGAATGTTCCACGTaGTACTCAATTCGGTCGATC | + |
|
Preference number: 5 (lower is better) Translates to: LMGVLAGWAQRRRELDPETECST*YSIRSI Trigger: GATCGACCGAATTGAGTACAACGTGGAACATTCCGT...CTCAGGATCCAGTTCCCGGCGTCTTTGAGCCCAGCCAGCCAGAACTCCCATTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS GCA 90 bp | CTCAATGCTTTGCTCGATCGCTTTCAACTTGGACCGGACCTTGTTTaGCGTCTTTTTGATGTCTGCCGTGAGGTCCTCCAACTCCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LNALLDRFQLGPDLV*RLFDVCREVLQLLF Trigger: AAACAGGAGTTGGAGGACCTCACGGCAGACATCAAAAAGACGGCAAACAAGGTCCGGTCCAAGTTGAAAGCGATCGAGCAAAGCATTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS-3UTR CAA 90 bp | GAGAGAGGTAGACAGACAAATGAAGGGACCGTTGGGGTGTGGGACATGAGGAAAACGGAATGTTCCACGTaGTACTCAATTCGGTCGATC | + |
|
Preference number: 5 (lower is better) Translates to: ERGRQTNEGTVGVWDMRKTECST*YSIRSI Trigger: GATCGACCGAATTGAGTACAACGTGGAACATTCCGT...TTTCCTCATGTCCCACACCCCAACGGTCCCTTCATTTGTCTGTCTACCTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156135.3 |
||
| CDS-3UTR CAA 90 bp | GGAATGGATAGGCAGGCTCCCTCCTCAGCACAGCTAATCTGGGGTTACATATATTTCCTGCTCAATGCTTaGCTCGATCGCTTTCAACTT | + |
|
Preference number: 5 (lower is better) Translates to: GMDRQAPSSAQLIWGYIYFLLNA*LDRFQL Trigger: AAGTTGAAAGCGATCGAGCAAAGCATTGAGCAGGAA...ATATATGTAACCCCAGATTAGCTGTGCTGAGGAGGGAGCCTGCCTATCCATTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS-3UTR CAA 90 bp | GAGAGAGGTAGACAGACAAATGAAGGGACCGTTGGGGTGTGGGACATGAGGAAAATGCTGGTTTCCAGTTaGATGATCTCATTGTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: ERGRQTNEGTVGVWDMRKMLVSS*MISLCL Trigger: AAGGCACAATGAGATCATCAAACTGGAAACCAGCAT...TTTCCTCATGTCCCACACCCCAACGGTCCCTTCATTTGTCTGTCTACCTCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156135.3 |
||
| CDS-3UTR CAA 90 bp | GGAATGGATAGGCAGGCTCCCTCCTCAGCACAGCTAATCTGGGGTTACATATATATGCTGGTTTCCAGTTaGATGATCTCATTGTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GMDRQAPSSAQLIWGYIYMLVSS*MISLCL Trigger: AAGGCACAATGAGATCATCAAACTGGAAACCAGCAT...ATATATGTAACCCCAGATTAGCTGTGCTGAGGAGGGAGCCTGCCTATCCATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS CAA 90 bp | TCTGCCGTGAGGTCCTCCAACTCCTGTTTAGTCTTCTCATCGGGGTaGGGGGCGGCAAGAATGGCGCTGTGCTGTTTCTTCACTTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SAVRSSNSCLVFSSG*GAARMALCCFFTCS Trigger: GGAGCAAGTGAAGAAACAGCACAGCGCCATTCTTGCCGCCCCCAACCCCGATGAGAAGACTAAACAGGAGTTGGAGGACCTCACGGCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS GCA 72 bp | GGGGCGGCAAGAATGGCGCTGTGCTGTTTCTTCACTTaGTCCACATCCTCAGACAGTTTCTCGATGCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GAARMALCCFFT*STSSDSFSMQP Trigger: AGGCTGCATCGAGAAACTGTCTGAGGATGTGGAGCAAGTGAAGAAACAGCACAGCGCCATTCTTGCCGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS GCA 72 bp | CGCAGGTCCGCAGAGGAACGATTCAGCCCCTCTTCCTaGTCAATGCTTTGCTCGATCGCTTTCAACTTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: RRSAEERFSPSS*SMLCSIAFNLD Trigger: GTCCAAGTTGAAAGCGATCGAGCAAAGCATTGAGCAGGAAGAGGGGCTGAATCGTTCCTCTGCGGACCTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
||
| CDS CAA 72 bp | AGGTCCTCCAACTCCTGTTTAGTCTTCTCATCGGGGTaGGGGGCGGCAAGAATGGCGCTGTGCTGTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RSSNSCLVFSSG*GAARMALCCFF Trigger: GAAGAAACAGCACAGCGCCATTCTTGCCGCCCCCAACCCCGATGAGAAGACTAAACAGGAGTTGGAGGACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| CDS CAA 90 bp | GCCTCTGGATTCGGTCCTTGCAGCGGTCCCGGTACTTGGACTGAGTaGCATTATATTCGGTCATTACCTCCACGAACTTCCGTGAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: ASGFGPCSGPGTWTE*HYIRSLPPRTSVRV Trigger: CACTCTCACGGAAGTTCGTGGAGGTAATGACCGAATATAATGCAACTCAGTCCAAGTACCGGGACCGCTGCAAGGACCGAATCCAGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| CDS GCA 72 bp | TCGGTCCTTGCAGCGGTCCCGGTACTTGGACTGAGTTaGATTATATTCGGTCATTACCTCCACGAACTTCCG | + |
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Preference number: 6 (lower is better) Translates to: SVLAAVPVLGLS*IIFGHYLHELP Trigger: CGGAAGTTCGTGGAGGTAATGACCGAATATAATGCAACTCAGTCCAAGTACCGGGACCGCTGCAAGGACCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| CDS CCA 72 bp | GCCTCTGGATTCGGTCCTTGCAGCGGTCCCGGTACTTaGACTGAGTTGCATTATATTCGGTCATTACCTCCA | + |
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Preference number: 6 (lower is better) Translates to: ASGFGPCSGPGT*TELHYIRSLPP Trigger: TGGAGGTAATGACCGAATATAATGCAACTCAGTCCAAGTACCGGGACCGCTGCAAGGACCGAATCCAGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| CDS TCA 72 bp | TGGATTCGGTCCTTGCAGCGGTCCCGGTACTTGGACTaGGTTGCATTATATTCGGTCATTACCTCCACGAAC | + |
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Preference number: 6 (lower is better) Translates to: WIRSLQRSRYLD*VALYSVITSTN Trigger: GTTCGTGGAGGTAATGACCGAATATAATGCAACTCAGTCCAAGTACCGGGACCGCTGCAAGGACCGAATCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| CDS GCA 72 bp | TCTTCACTTGCTCCACATCCTCAGACAGTTTCTCGATaGAGCCTCGGATCTCTTCCACCTGCTCGAAGAACT | + |
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Preference number: 6 (lower is better) Translates to: SSLAPHPQTVSR*SLGSLPPARRT Trigger: AGTTCTTCGAGCAGGTGGAAGAGATCCGAGGCTGCATCGAGAAACTGTCTGAGGATGTGGAGCAAGTGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| CDS GCA 72 bp | TTGCTCGATCGCTTTCAACTTGGACCGGACCTTGTTTaGCGTCTTTTTGATGTCTGCCGTGAGGTCCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: LLDRFQLGPDLV*RLFDVCREVLQ Trigger: TTGGAGGACCTCACGGCAGACATCAAAAAGACGGCAAACAAGGTCCGGTCCAAGTTGAAAGCGATCGAGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| CDS CAA 72 bp | ATGCTTTGCTCGATCGCTTTCAACTTGGACCGGACCTaGTTTGCCGTCTTTTTGATGTCTGCCGTGAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: MLCSIAFNLDRT*FAVFLMSAVRS Trigger: GGACCTCACGGCAGACATCAAAAAGACGGCAAACAAGGTCCGGTCCAAGTTGAAAGCGATCGAGCAAAGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| CDS CAA 72 bp | TTCGGTCCTTGCAGCGGTCCCGGTACTTGGACTGAGTaGCATTATATTCGGTCATTACCTCCACGAACTTCC | + |
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Preference number: 6 (lower is better) Translates to: FGPCSGPGTWTE*HYIRSLPPRTS Trigger: GGAAGTTCGTGGAGGTAATGACCGAATATAATGCAACTCAGTCCAAGTACCGGGACCGCTGCAAGGACCGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| CDS CAA 72 bp | AGCTTCCCGCTTTCCAACATGTCTTCTAGTTCTTCATaGGTAGTAGTCCTGCCAGTGATCTCCAGCTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SFPLSNMSSSSS*VVVLPVISSCL Trigger: GAGGCAGCTGGAGATCACTGGCAGGACTACTACCAATGAAGAACTAGAAGACATGTTGGAAAGCGGGAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106267.5 ENSMUST00000156135.3 |
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| CDS CAA 72 bp | TCTTCCTGCTCAATGCTTTGCTCGATCGCTTTCAACTaGGACCGGACCTTGTTTGCCGTCTTTTTGATGTCT | + |
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Preference number: 6 (lower is better) Translates to: SSCSMLCSIAFN*DRTLFAVFLMS Trigger: AGACATCAAAAAGACGGCAAACAAGGTCCGGTCCAAGTTGAAAGCGATCGAGCAAAGCATTGAGCAGGAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106267.5 |
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| CDS CAA 72 bp | TCATTCAGAGCTTGCTTTGTCATCTGCGAGTCCATTTaGATATCATCAGTGAAGATGGCCAGCTTCCCGCTT | + |
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Preference number: 6 (lower is better) Translates to: SFRACFVICESI*ISSVKMASFPL Trigger: AAGCGGGAAGCTGGCCATCTTCACTGATGATATCAAAATGGACTCGCAGATGACAAAGCAAGCTCTGAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106267.5 ENSMUST00000156135.3 |
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| CDS GCA 72 bp | CTTGTCTCGATCTCATTCAGAGCTTGCTTTGTCATCTaGGAGTCCATTTTGATATCATCAGTGAAGATGGCC | + |
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Preference number: 6 (lower is better) Translates to: LVSISFRACFVI*ESILISSVKMA Trigger: GGCCATCTTCACTGATGATATCAAAATGGACTCGCAGATGACAAAGCAAGCTCTGAATGAGATCGAGACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106267.5 ENSMUST00000156135.3 |
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| CDS GCA 72 bp | ATCTCATTGTGCCTTGTCTCGATCTCATTCAGAGCTTaGTTTGTCATCTGCGAGTCCATTTTGATATCATCA | + |
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Preference number: 6 (lower is better) Translates to: ISLCLVSISFRA*FVICESILISS Trigger: TGATGATATCAAAATGGACTCGCAGATGACAAAGCAAGCTCTGAATGAGATCGAGACAAGGCACAATGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106267.5 ENSMUST00000156135.3 |
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