Pregenerated sensors for STX1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007207Ensembl transcript IDs: ENSMUST00000005509.11, ENSMUST00000150838.2, ENSMUST00000201008.4
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GACTCCCAGCCAGAAGGCAGGAGTGGGGAGGGCAACCCAGCTAGGTaGAGCAGCCAGGGGCCTCCTCAGGGAGACCCATCCAGAATGGAG | + |
|
Preference number: 1 (lower is better) Translates to: DSQPEGRSGEGNPAR*SSQGPPQGDPSRME Trigger: CTCCATTCTGGATGGGTCTCCCTGAGGAGGCCCCTGGCTGCTGCACCTAGCTGGGTTGCCCTCCCCACTCCTGCCTTCTGGCTGGGAGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR GCA 90 bp | AGACCCCAGGCTGAAGAAAGGCAGACCTGGCCAGGGCCCGAGTCTTaGCCCGCACTGGCCTGTACCCAGCCACTCTGGCTGTTCCCAATC | + |
|
Preference number: 1 (lower is better) Translates to: RPQAEERQTWPGPES*PALACTQPLWLFPI Trigger: GATTGGGAACAGCCAGAGTGGCTGGGTACAGGCCAGTGCGGGGCAAGACTCGGGCCCTGGCCAGGTCTGCCTTTCTTCAGCCTGGGGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR CCA 90 bp | CCAGGGCCCGAGTCTTGCCCCGCACTGGCCTGTACCCAGCCACTCTaGCTGTTCCCAATCCTGCTCCCGACTCTGCCTCCTGTACAGACA | + |
|
Preference number: 1 (lower is better) Translates to: PGPESCPALACTQPL*LFPILLPTLPPVQT Trigger: TGTCTGTACAGGAGGCAGAGTCGGGAGCAGGATTGGGAACAGCCAGAGTGGCTGGGTACAGGCCAGTGCGGGGCAAGACTCGGGCCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR CCA 90 bp | CAGCTGGTCCCCACCTTCCAGGTGCCTTGGCATGGTGGGAAGAGCTaGAGAAGCCAGAGGACGGGACAAGTGAGGGCAAGGTTGGGGTCC | + |
|
Preference number: 1 (lower is better) Translates to: QLVPTFQVPWHGGKS*RSQRTGQVRARLGS Trigger: GGACCCCAACCTTGCCCTCACTTGTCCCGTCCTCTGGCTTCTCCAGCTCTTCCCACCATGCCAAGGCACCTGGAAGGTGGGGACCAGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR GCA 90 bp | AAAGCTGAGGGAAAGGGGGCACACAGACACGGCCCCAGCTCCCGCTaGATGCACTCGCATGCATACTCCTTGCCTGTGGGCGAGAAAGGG | + |
|
Preference number: 1 (lower is better) Translates to: KAEGKGAHRHGPSSR*MHSHAYSLPVGEKG Trigger: CCCTTTCTCGCCCACAGGCAAGGAGTATGCATGCGAGTGCATGCAGCGGGAGCTGGGGCCGTGTCTGTGTGCCCCCTTTCCCTCAGCTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR CCA 90 bp | GCCAGGGGCCTCCTCAGGGAGACCCATCCAGAATGGAGCAGTGGGTaGGGTGGTTTCTATCCAAAGATGCCCCCGATGGTGGAGGCGATG | + |
|
Preference number: 1 (lower is better) Translates to: ARGLLRETHPEWSSG*GGFYPKMPPMVEAM Trigger: CATCGCCTCCACCATCGGGGGCATCTTTGGATAGAAACCACCCCACCCACTGCTCCATTCTGGATGGGTCTCCCTGAGGAGGCCCCTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150838.2 |
||
| 3UTR TCA 90 bp | GAGGACGGGACAAGTGAGGGCAAGGTTGGGGTCCAGAAAGGAGCCTaGGTCCCAGGGAAGTGTAGACCCCAGGCTGAAGAAAGGCAGACC | + |
|
Preference number: 1 (lower is better) Translates to: EDGTSEGKVGVQKGA*VPGKCRPQAEERQT Trigger: GGTCTGCCTTTCTTCAGCCTGGGGTCTACACTTCCCTGGGACTCAGGCTCCTTTCTGGACCCCAACCTTGCCCTCACTTGTCCCGTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR GCA 90 bp | GCCCCGCACTGGCCTGTACCCAGCCACTCTGGCTGTTCCCAATCCTaGTCCCGACTCTGCCTCCTGTACAGACACACACTGTCACAAGAT | + |
|
Preference number: 1 (lower is better) Translates to: APHWPVPSHSGCSQS*SRLCLLYRHTLSQD Trigger: ATCTTGTGACAGTGTGTGTCTGTACAGGAGGCAGAGTCGGGAGCAGGATTGGGAACAGCCAGAGTGGCTGGGTACAGGCCAGTGCGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR CCA 90 bp | GGGCCTCCTCAGGGAGACCCATCCAGAATGGAGCAGTGGGTGGGGTaGTTTCTATCCAAAGATGCCCCCGATGGTGGAGGCGATGATGAT | + |
|
Preference number: 1 (lower is better) Translates to: GPPQGDPSRMEQWVG*FLSKDAPDGGGDDD Trigger: ATCATCATCGCCTCCACCATCGGGGGCATCTTTGGATAGAAACCACCCCACCCACTGCTCCATTCTGGATGGGTCTCCCTGAGGAGGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150838.2 |
||
| 3UTR CCA 90 bp | CCCAGCTGGCTGCTGAATACTGCATCCAGTACACCTGATACCACGTaGCACATCAATGGGAGACGGGGCAGGGTGAGACTACAGGCCCAA | + |
|
Preference number: 1 (lower is better) Translates to: PSWLLNTASSTPDTT*HINGRRGRVRLQAQ Trigger: TTGGGCCTGTAGTCTCACCCTGCCCCGTCTCCCATTGATGTGCCACGTGGTATCAGGTGTACTGGATGCAGTATTCAGCAGCCAGCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR GCA 90 bp | CCTGTACCCAGCCACTCTGGCTGTTCCCAATCCTGCTCCCGACTCTaGCTCCTGTACAGACACACACTGTCACAAGATCATGCACACGAC | + |
|
Preference number: 1 (lower is better) Translates to: PVPSHSGCSQSCSRL*LLYRHTLSQDHAHD Trigger: GTCGTGTGCATGATCTTGTGACAGTGTGTGTCTGTACAGGAGGCAGAGTCGGGAGCAGGATTGGGAACAGCCAGAGTGGCTGGGTACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR TCA 90 bp | GTACACCTGATACCACGTGGCACATCAATGGGAGACGGGGCAGGGTaGGACTACAGGCCCAAAGTGACACCTGGCTTTCAGAGCATAAAG | + |
|
Preference number: 1 (lower is better) Translates to: VHLIPRGTSMGDGAG*DYRPKVTPGFQSIK Trigger: CTTTATGCTCTGAAAGCCAGGTGTCACTTTGGGCCTGTAGTCTCACCCTGCCCCGTCTCCCATTGATGTGCCACGTGGTATCAGGTGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTGCTCCTAACACCCGCAGCCGTGGCACCCTGAGCCTCCGGGCAAGGGGCAGCGGCCTTCTTGGTGTCTaGCACGGCCCTCTCCACGTA | + |
|
Preference number: 2 (lower is better) Translates to: GAPNTRSRGTLSLRARGSGLLGV*HGPLHV Trigger: TACGTGGAGAGGGCCGTGTCAGACACCAAGAAGGCC...GCTGCCCCTTGCCCGGAGGCTCAGGGTGCCACGGCTGCGGGTGTTAGGAGCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150838.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGAGGGTACTAGGTGCTCCTAACACCCGCAGCCGTGGCACCCTGAGCCTCCGGGGCAACCCAGCTAGGTaGAGCAGCCAGGGGCCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: ERVLGAPNTRSRGTLSLRGNPAR*SSQGPP Trigger: AGGAGGCCCCTGGCTGCTGCACCTAGCTGGGTTGCC...CCGGAGGCTCAGGGTGCCACGGCTGCGGGTGTTAGGAGCACCTAGTACCCTCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR GCA 90 bp | GGAGGTGGCCGTGAGAAGGCAGCACGGACAGTGGTCACAGTCACTGGGCAGGAGCCAGGGCCCGAGTCTTaGCCCGCACTGGCCTGTACC | + |
|
Preference number: 2 (lower is better) Translates to: GGGREKAARTVVTVTGQEPGPES*PALACT Trigger: GGTACAGGCCAGTGCGGGGCAAGACTCGGGCCCTGG...CTCCTGCCCAGTGACTGTGACCACTGTCCGTGCTGCCTTCTCACGGCCACCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTGCTCCTAACACCCGCAGCCGTGGCACCCTGAGCCTCCGGGCAAGGGGCAGCGTCCAGAAAGGAGCCTaGGTCCCAGGGAAGTGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: GAPNTRSRGTLSLRARGSVQKGA*VPGKCR Trigger: TCTACACTTCCCTGGGACTCAGGCTCCTTTCTGGAC...GCTGCCCCTTGCCCGGAGGCTCAGGGTGCCACGGCTGCGGGTGTTAGGAGCACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCCCGAGTCTTGCCCCGCACTGGCCTGTACCCAGCCACTCTGGCTGTTCCCAAGGGACGGGAGCCTCATaGCAGAGAGGGAGCAGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: GPSLAPHWPVPSHSGCSQGTGAS*QRGSSV Trigger: CACACTGCTCCCTCTCTGCCATGAGGCTCCCGTCCC...TTGGGAACAGCCAGAGTGGCTGGGTACAGGCCAGTGCGGGGCAAGACTCGGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGTACCCAGCCACTCTGGCTGTTCCCAATCCTGCTCCCGACTCTGCCTCCTGTCTTGGGGCAGGGTGGTaGGGACGGGAGCCTCATGGC | + |
|
Preference number: 2 (lower is better) Translates to: LYPATLAVPNPAPDSASCLGAGW*GREPHG Trigger: GCCATGAGGCTCCCGTCCCCACCACCCTGCCCCAAG...ACAGGAGGCAGAGTCGGGAGCAGGATTGGGAACAGCCAGAGTGGCTGGGTACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAGAGAGGGTACTAGGTGCTCCTAACACCCGCAGCCGTGGCACCCTGAGCCTCGGCAACCCAGCTAGGTaGAGCAGCCAGGGGCCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: KERVLGAPNTRSRGTLSLGNPAR*SSQGPP Trigger: AGGAGGCCCCTGGCTGCTGCACCTAGCTGGGTTGCC...GAGGCTCAGGGTGCCACGGCTGCGGGTGTTAGGAGCACCTAGTACCCTCTCTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCCCAGCTCCCGCTGCATGCACTCGCATGCATACTCCTTGCCTGTGGGCGAGAAGTCTTGCCCCGCACTaGCCTGTACCCAGCCACTCT | + |
|
Preference number: 2 (lower is better) Translates to: APAPAACTRMHTPCLWARSLAPH*PVPSHS Trigger: AGAGTGGCTGGGTACAGGCCAGTGCGGGGCAAGACT...TCTCGCCCACAGGCAAGGAGTATGCATGCGAGTGCATGCAGCGGGAGCTGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR CCA 90 bp | CGGCCCCAGCTCCCGCTGCATGCACTCGCATGCATACTCCTTGCCTGTGGGCGAGGTGCCTTGGCATGGTaGGAAGAGCTGGAGAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: RPQLPLHALACILLACGRGALAW*EELEKP Trigger: TGGCTTCTCCAGCTCTTCCCACCATGCCAAGGCACC...TCGCCCACAGGCAAGGAGTATGCATGCGAGTGCATGCAGCGGGAGCTGGGGCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGGGCAGGAGCAAAGCTGAGGGAAAGGGGGCACACAGACACGGCCCCAGCTCCACCTTCCAGGTGCCTTaGCATGGTGGGAAGAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LGRSKAEGKGAHRHGPSSTFQVP*HGGKSW Trigger: CCAGCTCTTCCCACCATGCCAAGGCACCTGGAAGGT...GGAGCTGGGGCCGTGTCTGTGTGCCCCCTTTCCCTCAGCTTTGCTCCTGCCCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR CCA 90 bp | CCAGGGAAGTGTAGACCCCAGGCTGAAGAAAGGCAGACCTGGCCAGGGCCCGAGCACCATGTGACCAGCTaGTCCCCACCTTCCAGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: PGKCRPQAEERQTWPGPEHHVTS*SPPSRC Trigger: GCACCTGGAAGGTGGGGACCAGCTGGTCACATGGTG...CTCGGGCCCTGGCCAGGTCTGCCTTTCTTCAGCCTGGGGTCTACACTTCCCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCCCAGCTCCCGCTGCATGCACTCGCATGCATACTCCTTGCCTGTGGGCGAGAAGCCCCCTCCCCAGCTaGCTGCTGAATACTGCATCC | + |
|
Preference number: 2 (lower is better) Translates to: APAPAACTRMHTPCLWARSPLPS*LLNTAS Trigger: GGATGCAGTATTCAGCAGCCAGCTGGGGAGGGGGCT...TCTCGCCCACAGGCAAGGAGTATGCATGCGAGTGCATGCAGCGGGAGCTGGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGGTCCCCACCTTCCAGGTGCCTTGGCATGGTGGGAAGAGCTGGAGAAGCCAGGGCTGTTCCCAATCCTaGTCCCGACTCTGCCTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: LVPTFQVPWHGGKSWRSQGCSQS*SRLCLL Trigger: CAGGAGGCAGAGTCGGGAGCAGGATTGGGAACAGCC...CTGGCTTCTCCAGCTCTTCCCACCATGCCAAGGCACCTGGAAGGTGGGGACCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR GCA 90 bp | CCAGGGAAGTGTAGACCCCAGGCTGAAGAAAGGCAGACCTGGCCAGGGCCCGAGTCCCCACCTTCCAGGTaGCTTGGCATGGTGGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: PGKCRPQAEERQTWPGPESPPSR*LGMVGR Trigger: TCTTCCCACCATGCCAAGGCACCTGGAAGGTGGGGA...CTCGGGCCCTGGCCAGGTCTGCCTTTCTTCAGCCTGGGGTCTACACTTCCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCCCAGCTCCCGCTGCATGCACTCGCATGCATACTCCTTGCCTGTGGGCGAGAGAGACCCATCCAGAATaGAGCAGTGGGTGGGGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: APAPAACTRMHTPCLWARETHPE*SSGWGG Trigger: ACCACCCCACCCACTGCTCCATTCTGGATGGGTCTC...TCTCGCCCACAGGCAAGGAGTATGCATGCGAGTGCATGCAGCGGGAGCTGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGTACCCAGCCACTCTGGCTGTTCCCAATCCTGCTCCCGACTCTGCCTCCTGTGGGACGGGAGCCTCATaGCAGAGAGGGAGCAGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: LYPATLAVPNPAPDSASCGTGAS*QRGSSV Trigger: CACACTGCTCCCTCTCTGCCATGAGGCTCCCGTCCC...ACAGGAGGCAGAGTCGGGAGCAGGATTGGGAACAGCCAGAGTGGCTGGGTACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR CCA 90 bp | CCAGGGAAGTGTAGACCCCAGGCTGAAGAAAGGCAGACCTGGCCAGGGCCCGAGGGTGCCTTGGCATGGTaGGAAGAGCTGGAGAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: PGKCRPQAEERQTWPGPEGALAW*EELEKP Trigger: TGGCTTCTCCAGCTCTTCCCACCATGCCAAGGCACC...CTCGGGCCCTGGCCAGGTCTGCCTTTCTTCAGCCTGGGGTCTACACTTCCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR CAA 90 bp | GGGAAGAGCTGGAGAAGCCAGAGGACGGGACAAGTGAGGGCAAGGTaGGGGTCCAGAAAGGAGCCTGAGTCCCAGGGAAGTGTAGACCCC | + |
|
Preference number: 2 (lower is better) Translates to: GKSWRSQRTGQVRAR*GSRKEPESQGSVDP Trigger: GGGGTCTACACTTCCCTGGGACTCAGGCTCCTTTCTGGACCCCAACCTTGCCCTCACTTGTCCCGTCCTCTGGCTTCTCCAGCTCTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR GCA 90 bp | GGAGGTGGCCGTGAGAAGGCAGCACGGACAGTGGTCACAGTCACTGGGCAGGAGTCCTGCTCCCGACTCTaGCTCCTGTACAGACACACA | + |
|
Preference number: 2 (lower is better) Translates to: GGGREKAARTVVTVTGQESCSRL*LLYRHT Trigger: TGTGTGTCTGTACAGGAGGCAGAGTCGGGAGCAGGA...CTCCTGCCCAGTGACTGTGACCACTGTCCGTGCTGCCTTCTCACGGCCACCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR GCA 90 bp | GCCCCAGCTCCCGCTGCATGCACTCGCATGCATACTCCTTGCCTGTGGGCGAGACTGCATGCACTCGCATaGATACTCCTTGCCTGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: APAPAACTRMHTPCLWARLHALA*ILLACG Trigger: CCCACAGGCAAGGAGTATGCATGCGAGTGCATGCAG...TCTCGCCCACAGGCAAGGAGTATGCATGCGAGTGCATGCAGCGGGAGCTGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTGGTTGTACCAAGACCTTTGGTGAAGGGGTAAAGGGAGGTGGCCGTGAGAAGCGGCTTGGGGCAGGGTaGTGGGGACGGGAGCCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: AGCTKTFGEGVKGGGREKRLGAG*WGREPH Trigger: ATGAGGCTCCCGTCCCCACCACCCTGCCCCAAGCCG...CTTCTCACGGCCACCTCCCTTTACCCCTTCACCAAAGGTCTTGGTACAACCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR CCA 90 bp | CATGCACTCGCATGCATACTCCTTGCCTGTGGGCGAGAAAGGGGTCCTGGGGCAAGTCTTGCCCCGCACTaGCCTGTACCCAGCCACTCT | + |
|
Preference number: 2 (lower is better) Translates to: HALACILLACGRERGPGASLAPH*PVPSHS Trigger: AGAGTGGCTGGGTACAGGCCAGTGCGGGGCAAGACT...TGCCCCAGGACCCCTTTCTCGCCCACAGGCAAGGAGTATGCATGCGAGTGCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAGAGAGGGTACTAGGTGCTCCTAACACCCGCAGCCGTGGCACCCTGAGCCTCGAAGAAAGGCAGACCTaGCCAGGGCCCGAGTCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: KERVLGAPNTRSRGTLSLEERQT*PGPESC Trigger: GCAAGACTCGGGCCCTGGCCAGGTCTGCCTTTCTTC...GAGGCTCAGGGTGCCACGGCTGCGGGTGTTAGGAGCACCTAGTACCCTCTCTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR CCA 90 bp | CATGCACTCGCATGCATACTCCTTGCCTGTGGGCGAGAAAGGGGTCCTGGGGCAACCTTCCAGGTGCCTTaGCATGGTGGGAAGAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: HALACILLACGRERGPGATFQVP*HGGKSW Trigger: CCAGCTCTTCCCACCATGCCAAGGCACCTGGAAGGT...TGCCCCAGGACCCCTTTCTCGCCCACAGGCAAGGAGTATGCATGCGAGTGCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAGGTGGCCGTGAGAAGGCAGCACGGACAGTGGTCACAGTCACTGGGCAGGAGACACCTGATACCACGTaGCACATCAATGGGAGACGG | + |
|
Preference number: 2 (lower is better) Translates to: GGGREKAARTVVTVTGQETPDTT*HINGRR Trigger: CCGTCTCCCATTGATGTGCCACGTGGTATCAGGTGT...CTCCTGCCCAGTGACTGTGACCACTGTCCGTGCTGCCTTCTCACGGCCACCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR GCA 90 bp | GGACAAGTGAGGGCAAGGTTGGGGTCCAGAAAGGAGCCTGAGTCCCAGGGAAGTTCCCCACCTTCCAGGTaGCTTGGCATGGTGGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: GQVRARLGSRKEPESQGSSPPSR*LGMVGR Trigger: TCTTCCCACCATGCCAAGGCACCTGGAAGGTGGGGA...ACTTCCCTGGGACTCAGGCTCCTTTCTGGACCCCAACCTTGCCCTCACTTGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCAGTACACCTGATACCACGTGGCACATCAATGGGAGACGGGGCAGGGTGAGAAGCCCCCTCCCCAGCTaGCTGCTGAATACTGCATCC | + |
|
Preference number: 2 (lower is better) Translates to: SSTPDTTWHINGRRGRVRSPLPS*LLNTAS Trigger: GGATGCAGTATTCAGCAGCCAGCTGGGGAGGGGGCT...TCTCACCCTGCCCCGTCTCCCATTGATGTGCCACGTGGTATCAGGTGTACTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR TCA 90 bp | ACCAAGACCTTTGGTGAAGGGGTAAAGGGAGGTGGCCGTGAGAAGGCAGCACGGTCCCCAGCTGGCTGCTaGATACTGCATCCAGTACAC | + |
|
Preference number: 2 (lower is better) Translates to: TKTFGEGVKGGGREKAARSPAGC*ILHPVH Trigger: GTGTACTGGATGCAGTATTCAGCAGCCAGCTGGGGA...CCGTGCTGCCTTCTCACGGCCACCTCCCTTTACCCCTTCACCAAAGGTCTTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR GCA 90 bp | AACTTACCATGCCTGTTAGGACTATGGCCTGCTCCATCCCTCCAACTCAAAGCACCAGGGCCCGAGTCTTaGCCCGCACTGGCCTGTACC | + |
|
Preference number: 2 (lower is better) Translates to: NLPCLLGLWPAPSLQLKAPGPES*PALACT Trigger: GGTACAGGCCAGTGCGGGGCAAGACTCGGGCCCTGG...TGCTTTGAGTTGGAGGGATGGAGCAGGCCATAGTCCTAACAGGCATGGTAAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGACACACACTGTCACAAGATCATGCACACGACACGGCTTGGGGCAGGGTGGTGAGACCCATCCAGAATaGAGCAGTGGGTGGGGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: QTHTVTRSCTRHGLGQGGETHPE*SSGWGG Trigger: ACCACCCCACCCACTGCTCCATTCTGGATGGGTCTC...ACCACCCTGCCCCAAGCCGTGTCGTGTGCATGATCTTGTGACAGTGTGTGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCAGTACACCTGATACCACGTGGCACATCAATGGGAGACGGGGCAGGGTGAGAGGGAGCAGTGTGGGATaGGAGGGAAAAGGACTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: SSTPDTTWHINGRRGRVRGSSVG*EGKGLP Trigger: TGGGAGTCCTTTTCCCTCCCATCCCACACTGCTCCC...TCTCACCCTGCCCCGTCTCCCATTGATGTGCCACGTGGTATCAGGTGTACTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR CCA 90 bp | ACACACACTGTCACAAGATCATGCACACGACACGGCTTGGGGCAGGGTGGTGGGTCCAGAATGGAGCAGTaGGTGGGGTGGTTTCTATCC | + |
|
Preference number: 2 (lower is better) Translates to: THTVTRSCTRHGLGQGGGSRMEQ*VGWFLS Trigger: GGATAGAAACCACCCCACCCACTGCTCCATTCTGGA...CCCACCACCCTGCCCCAAGCCGTGTCGTGTGCATGATCTTGTGACAGTGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150838.2 |
||
| 3UTR-3UTR TCA 90 bp | CCCAGCTGGCTGCTGAATACTGCATCCAGTACACCTGATACCACGTGGCACATCTCCCCACCCCTAACCTaGAAAGCAGCACCATGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: PSWLLNTASSTPDTTWHISPPLT*KAAPCD Trigger: GTCACATGGTGCTGCTTTTCAGGTTAGGGGTGGGGA...GATGTGCCACGTGGTATCAGGTGTACTGGATGCAGTATTCAGCAGCCAGCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR TCA 90 bp | AAATGGGCAGCTGGTTGTACCAAGACCTTTGGTGAAGGGGTAAAGGGAGGTGGCTCCCCACCCCTAACCTaGAAAGCAGCACCATGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: KWAAGCTKTFGEGVKGGGSPPLT*KAAPCD Trigger: GTCACATGGTGCTGCTTTTCAGGTTAGGGGTGGGGA...GCCACCTCCCTTTACCCCTTCACCAAAGGTCTTGGTACAACCAGCTGCCCATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCAGCTGGCTGCTGAATACTGCATCCAGTACACCTGATACCACGTGGCACATCGAATGGAGCAGTGGGTaGGGTGGTTTCTATCCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: PSWLLNTASSTPDTTWHIEWSSG*GGFYPK Trigger: CTTTGGATAGAAACCACCCCACCCACTGCTCCATTC...GATGTGCCACGTGGTATCAGGTGTACTGGATGCAGTATTCAGCAGCCAGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150838.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCTGGCTGCTGAATACTGCATCCAGTACACCTGATACCACGTGGCACATCAATAAAAGCAGCACCATGTaGCCAGCTGGTCCCCACCTT | + |
|
Preference number: 2 (lower is better) Translates to: SWLLNTASSTPDTTWHINKSSTM*PAGPHL Trigger: AAGGTGGGGACCAGCTGGTCACATGGTGCTGCTTTT...ATTGATGTGCCACGTGGTATCAGGTGTACTGGATGCAGTATTCAGCAGCCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR GCA 90 bp | AACTTACCATGCCTGTTAGGACTATGGCCTGCTCCATCCCTCCAACTCAAAGCATCCTGCTCCCGACTCTaGCTCCTGTACAGACACACA | + |
|
Preference number: 2 (lower is better) Translates to: NLPCLLGLWPAPSLQLKASCSRL*LLYRHT Trigger: TGTGTGTCTGTACAGGAGGCAGAGTCGGGAGCAGGA...TGCTTTGAGTTGGAGGGATGGAGCAGGCCATAGTCCTAACAGGCATGGTAAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCTGGCTGCTGAATACTGCATCCAGTACACCTGATACCACGTGGCACATCAATACACCTGATACCACGTaGCACATCAATGGGAGACGG | + |
|
Preference number: 2 (lower is better) Translates to: SWLLNTASSTPDTTWHINTPDTT*HINGRR Trigger: CCGTCTCCCATTGATGTGCCACGTGGTATCAGGTGT...ATTGATGTGCCACGTGGTATCAGGTGTACTGGATGCAGTATTCAGCAGCCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR CCA 90 bp | ATAAAAATCTCACAAAATGGGCAGCTGGTTGTACCAAGACCTTTGGTGAAGGGGCTGCGCGCCTTGCTCTaGTACTTGACGGCCTTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: IKISQNGQLVVPRPLVKGLRALL*YLTAFL Trigger: CAAGAAGGCCGTCAAGTACCAGAGCAAGGCGCGCAG...CCCCTTCACCAAAGGTCTTGGTACAACCAGCTGCCCATTTTGTGAGATTTTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000150838.2 |
||
| 3UTR GCA 72 bp | CCAGCTCCCGCTGCATGCACTCGCATGCATACTCCTTaGCTGTGGGCGAGAAAGGGGTCCTGGGGCAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: PAPAACTRMHTP*LWARKGSWGRG Trigger: CCCCCTGCCCCAGGACCCCTTTCTCGCCCACAGGCAAGGAGTATGCATGCGAGTGCATGCAGCGGGAGCTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR GCA 72 bp | GGAAAGGGGGCACACAGACACGGCCCCAGCTCCCGCTaGATGCACTCGCATGCATACTCCTTGCCTGTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: GKGAHRHGPSSR*MHSHAYSLPVG Trigger: GCCCACAGGCAAGGAGTATGCATGCGAGTGCATGCAGCGGGAGCTGGGGCCGTGTCTGTGTGCCCCCTTTCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR GCA 72 bp | CAGACACGGCCCCAGCTCCCGCTGCATGCACTCGCATaGATACTCCTTGCCTGTGGGCGAGAAAGGGGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: QTRPQLPLHALA*ILLACGRERGP Trigger: AGGACCCCTTTCTCGCCCACAGGCAAGGAGTATGCATGCGAGTGCATGCAGCGGGAGCTGGGGCCGTGTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGCTGTTCCCAATCCTGCTCCCGACTCTGCCTCCTGTACAGACACACACTGTTGCACACGACACGGCTaGGGGCAGGGTGGTGGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LAVPNPAPDSASCTDTHCCTRHG*GQGGGD Trigger: GTCCCCACCACCCTGCCCCAAGCCGTGTCGTGTGCA...ACAGTGTGTGTCTGTACAGGAGGCAGAGTCGGGAGCAGGATTGGGAACAGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGTGGCCGTGAGAAGGCAGCACGGACAGTGGTCACAGTCACTGGGCAGGAGTACTTGACGGCCTTCTaGGTGTCTGACACGGCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GGGREKAARTVVTVTGQEYLTAF*VSDTAL Trigger: GAGGGCCGTGTCAGACACCAAGAAGGCCGTCAAGTA...CTCCTGCCCAGTGACTGTGACCACTGTCCGTGCTGCCTTCTCACGGCCACCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150838.2 |
||
| 3UTR CCA 72 bp | CCAGCTGGTCCCCACCTTCCAGGTGCCTTGGCATGGTaGGAAGAGCTGGAGAAGCCAGAGGACGGGACAAGT | + |
|
Preference number: 3 (lower is better) Translates to: PAGPHLPGALAW*EELEKPEDGTS Trigger: ACTTGTCCCGTCCTCTGGCTTCTCCAGCTCTTCCCACCATGCCAAGGCACCTGGAAGGTGGGGACCAGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR TCA 72 bp | GTGGGAAGAGCTGGAGAAGCCAGAGGACGGGACAAGTaGGGGCAAGGTTGGGGTCCAGAAAGGAGCCTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: VGRAGEARGRDK*GQGWGPERSLS Trigger: ACTCAGGCTCCTTTCTGGACCCCAACCTTGCCCTCACTTGTCCCGTCCTCTGGCTTCTCCAGCTCTTCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR GCA 72 bp | TGGCCTGTACCCAGCCACTCTGGCTGTTCCCAATCCTaGTCCCGACTCTGCCTCCTGTACAGACACACACTG | + |
|
Preference number: 3 (lower is better) Translates to: WPVPSHSGCSQS*SRLCLLYRHTL Trigger: CAGTGTGTGTCTGTACAGGAGGCAGAGTCGGGAGCAGGATTGGGAACAGCCAGAGTGGCTGGGTACAGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR CCA 72 bp | CAGGGAGACCCATCCAGAATGGAGCAGTGGGTGGGGTaGTTTCTATCCAAAGATGCCCCCGATGGTGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: QGDPSRMEQWVG*FLSKDAPDGGG Trigger: GCCTCCACCATCGGGGGCATCTTTGGATAGAAACCACCCCACCCACTGCTCCATTCTGGATGGGTCTCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150838.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGTTGTACCAAGACCTTTGGTGAAGGGGTAAAGGGAGGTGGCCGTGAGAAGTTCTTCCTGCGCGCCTaGCTCTGGTACTTGACGGCC | + |
|
Preference number: 3 (lower is better) Translates to: AGCTKTFGEGVKGGGREKFFLRA*LWYLTA Trigger: GGCCGTCAAGTACCAGAGCAAGGCGCGCAGGAAGAA...CTTCTCACGGCCACCTCCCTTTACCCCTTCACCAAAGGTCTTGGTACAACCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150838.2 |
||
| 3UTR TCA 72 bp | CCCCAGCTGGCTGCTGAATACTGCATCCAGTACACCTaGTACCACGTGGCACATCAATGGGAGACGGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PQLAAEYCIQYT*YHVAHQWETGQ Trigger: CTGCCCCGTCTCCCATTGATGTGCCACGTGGTATCAGGTGTACTGGATGCAGTATTCAGCAGCCAGCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR CCA 72 bp | CTCCTCAGGGAGACCCATCCAGAATGGAGCAGTGGGTaGGGTGGTTTCTATCCAAAGATGCCCCCGATGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LLRETHPEWSSG*GGFYPKMPPMV Trigger: CACCATCGGGGGCATCTTTGGATAGAAACCACCCCACCCACTGCTCCATTCTGGATGGGTCTCCCTGAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150838.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTATGGCCTGCTCCATCCCTCCAACTCAAAGCAAGGCTGGAGATGACACCACTCACCTTCCAGGTGCCTaGGCATGGTGGGAAGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TMACSIPPTQSKAGDDTTHLPGA*AWWEEL Trigger: CAGCTCTTCCCACCATGCCAAGGCACCTGGAAGGTG...AGTGGTGTCATCTCCAGCCTTGCTTTGAGTTGGAGGGATGGAGCAGGCCATAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR TCA 72 bp | ATACCACGTGGCACATCAATGGGAGACGGGGCAGGGTaGGACTACAGGCCCAAAGTGACACCTGGCTTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: IPRGTSMGDGAG*DYRPKVTPGFQ Trigger: CTGAAAGCCAGGTGTCACTTTGGGCCTGTAGTCTCACCCTGCCCCGTCTCCCATTGATGTGCCACGTGGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR CAA 90 bp | AAATGGGCAGCTGGTTGTACCAAGACCTTTGGTGAAGGGGTAAAGGGAGGTGGCCAAGTGAGGGCAAGGTaGGGGTCCAGAAAGGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: KWAAGCTKTFGEGVKGGGQVRAR*GSRKEP Trigger: AGGCTCCTTTCTGGACCCCAACCTTGCCCTCACTTG...GCCACCTCCCTTTACCCCTTCACCAAAGGTCTTGGTACAACCAGCTGCCCATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR GCA 72 bp | AGCCACTCTGGCTGTTCCCAATCCTGCTCCCGACTCTaGCTCCTGTACAGACACACACTGTCACAAGATCAT | + |
|
Preference number: 3 (lower is better) Translates to: SHSGCSQSCSRL*LLYRHTLSQDH Trigger: ATGATCTTGTGACAGTGTGTGTCTGTACAGGAGGCAGAGTCGGGAGCAGGATTGGGAACAGCCAGAGTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR GCA 72 bp | ACACCTGGCTTTCAGAGCATAAAGGGCGCAGGGAACTaGTGTCCCCAACATGCAACTCTGGCCACAACTTAC | + |
|
Preference number: 3 (lower is better) Translates to: TPGFQSIKGAGN*CPQHATLATTY Trigger: GTAAGTTGTGGCCAGAGTTGCATGTTGGGGACAGCAGTTCCCTGCGCCCTTTATGCTCTGAAAGCCAGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR CAA 90 bp | AACTTACCATGCCTGTTAGGACTATGGCCTGCTCCATCCCTCCAACTCAAAGCACAAGTGAGGGCAAGGTaGGGGTCCAGAAAGGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: NLPCLLGLWPAPSLQLKAQVRAR*GSRKEP Trigger: AGGCTCCTTTCTGGACCCCAACCTTGCCCTCACTTG...TGCTTTGAGTTGGAGGGATGGAGCAGGCCATAGTCCTAACAGGCATGGTAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR CCA 72 bp | AACTCTGGCCACAACTTACCATGCCTGTTAGGACTATaGCCTGCTCCATCCCTCCAACTCAAAGCAAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: NSGHNLPCLLGL*PAPSLQLKARL Trigger: CAGCCTTGCTTTGAGTTGGAGGGATGGAGCAGGCCATAGTCCTAACAGGCATGGTAAGTTGTGGCCAGAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR-3UTR CAA 90 bp | AACTTACCATGCCTGTTAGGACTATGGCCTGCTCCATCCCTCCAACTCAAAGCAAGACACTGTCAGGCTTaGCCCAAAGAGAGGGTACTA | + |
|
Preference number: 3 (lower is better) Translates to: NLPCLLGLWPAPSLQLKARHCQA*PKERVL Trigger: TAGTACCCTCTCTTTGGGCAAAGCCTGACAGTGTCT...TGCTTTGAGTTGGAGGGATGGAGCAGGCCATAGTCCTAACAGGCATGGTAAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| 3UTR CAA 72 bp | CCCAGCTCCCGCTGCATGCACTCGCATGCATACTCCTaGCCTGTGGGCGAGAAAGGGGTCCTGGGGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSSRCMHSHAYS*PVGEKGVLGQG Trigger: CCCCTGCCCCAGGACCCCTTTCTCGCCCACAGGCAAGGAGTATGCATGCGAGTGCATGCAGCGGGAGCTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR GCA 90 bp | AACCCAGCTAGGTGCAGCAGCCAGGGGCCTCCTCAGGGAGACCCATCCAGAATGCGCTGTCCTTGGCCGTaGGGAGCTCCTGGGTTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: NPARCSSQGPPQGDPSRMRCPWP*GAPGFG Trigger: ACCGAACCCAGGAGCTCCGCACGGCCAAGGACAGCG...CATTCTGGATGGGTCTCCCTGAGGAGGCCCCTGGCTGCTGCACCTAGCTGGGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR GCA 90 bp | GCCCCAGCTCCCGCTGCATGCACTCGCATGCATACTCCTTGCCTGTGGGCGAGACGGGACAGCGTGGAGTaGTGCGTCTTCCGGATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: APAPAACTRMHTPCLWARRDSVE*CVFRIL Trigger: GAGGATCCGGAAGACGCAGCACTCCACGCTGTCCCG...TCTCGCCCACAGGCAAGGAGTATGCATGCGAGTGCATGCAGCGGGAGCTGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR TCA 90 bp | AGAGAGGGAGCAGTGTGGGATGGGAGGGAAAAGGACTCCCAGCCAGAAGGCAGGTCGTGGTCCGGCCGGTaGTCTCCAGCTGCCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: REGAVWDGREKDSQPEGRSWSGR*SPAASG Trigger: TCCAGAGGCAGCTGGAGATCACCGGCCGGACCACGA...CCTGCCTTCTGGCTGGGAGTCCTTTTCCCTCCCATCCCACACTGCTCCCTCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR TCA 90 bp | CTGGGCAGGAGCAAAGCTGAGGGAAAGGGGGCACACAGACACGGCCCCAGCTCCGCGTTCTCGGTAGTCTaGCTGAGTGGCGTTGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: LGRSKAEGKGAHRHGPSSAFSVV*LSGVVL Trigger: GAGTACAACGCCACTCAGTCAGACTACCGAGAACGC...GGAGCTGGGGCCGTGTCTGTGTGCCCCCTTTCCCTCAGCTTTGCTCCTGCCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR GCA 90 bp | CTGTCACAAGATCATGCACACGACACGGCTTGGGGCAGGGTGGTGGGGACGGGACCGGTGATCTCCAGCTaGCTCTGGATGCGCCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSQDHAHDTAWGRVVGTGPVISS*LWMRPL Trigger: CAAAGGGCGCATCCAGAGGCAGCTGGAGATCACCGG...TCCCGTCCCCACCACCCTGCCCCAAGCCGTGTCGTGTGCATGATCTTGTGACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAGGGAGCAGTGTGGGATGGGAGGGAAAAGGACTCCCAGCCAGAAGGCAGGCCGGTGATCTCCAGCTaGCTCTGGATGCGCCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: REGAVWDGREKDSQPEGRPVISS*LWMRPL Trigger: CAAAGGGCGCATCCAGAGGCAGCTGGAGATCACCGG...CCTGCCTTCTGGCTGGGAGTCCTTTTCCCTCCCATCCCACACTGCTCCCTCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR TCA 90 bp | CATGCACTCGCATGCATACTCCTTGCCTGTGGGCGAGAAAGGGGTCCTGGGGCATGGTCTCGATCTCACTaGGGGCCTGCTTCGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: HALACILLACGRERGPGAWSRSH*GPASRC Trigger: GCATCTCGAAGCAGGCCCTCAGTGAGATCGAGACCA...TGCCCCAGGACCCCTTTCTCGCCCACAGGCAAGGAGTATGCATGCGAGTGCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR TCA 90 bp | AGAGAGGGAGCAGTGTGGGATGGGAGGGAAAAGGACTCCCAGCCAGAAGGCAGGTGGTCTCGATCTCACTaGGGGCCTGCTTCGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: REGAVWDGREKDSQPEGRWSRSH*GPASRC Trigger: GCATCTCGAAGCAGGCCCTCAGTGAGATCGAGACCA...CCTGCCTTCTGGCTGGGAGTCCTTTTCCCTCCCATCCCACACTGCTCCCTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR GCA 90 bp | ACTGGCCTGTACCCAGCCACTCTGGCTGTTCCCAATCCTGCTCCCGACTCTGCCATCTCACTGAGGGCCTaGTTCGAGATGCTGGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TGLYPATLAVPNPAPDSAISLRA*FEMLES Trigger: GGACTCCAGCATCTCGAAGCAGGCCCTCAGTGAGAT...GGCAGAGTCGGGAGCAGGATTGGGAACAGCCAGAGTGGCTGGGTACAGGCCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGAGAGGGAGCAGTGTGGGATGGGAGGGAAAAGGACTCCCAGCCAGAAGGCTTCAGGAAAGTCTCCTaGCTCTCCACCAGCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GREGAVWDGREKDSQPEGFRKVS*LSTSMA Trigger: GGCCATGCTGGTGGAGAGCCAGGAGACTTTCCTGAA...GCCTTCTGGCTGGGAGTCCTTTTCCCTCCCATCCCACACTGCTCCCTCTCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150838.2 |
||
| CDS-3UTR TCA 90 bp | CCACTCTGGCTGTTCCCAATCCTGCTCCCGACTCTGCCTCCTGTACAGACACACGCATGGCCATGTCCATaGACATGTCGTGCAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PLWLFPILLPTLPPVQTHAWPCP*TCRAAP Trigger: GGGAGCTGCACGACATGTTCATGGACATGGCCATGC...GTGTGTCTGTACAGGAGGCAGAGTCGGGAGCAGGATTGGGAACAGCCAGAGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR GCA 90 bp | CACTCTGGCTGTTCCCAATCCTGCTCCCGACTCTGCCTCCTGTACAGACACACACCAGCTGCCTCTGGATaGGCCCTTTGCAGCGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HSGCSQSCSRLCLLYRHTPAASG*ALCSVL Trigger: GAGAACGCTGCAAAGGGCGCATCCAGAGGCAGCTGG...TGTGTGTCTGTACAGGAGGCAGAGTCGGGAGCAGGATTGGGAACAGCCAGAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR CCA 90 bp | AAAGAGAGGGTACTAGGTGCTCCTAACACCCGCAGCCGTGGCACCCTGAGCCTCTCCCAGAGGCAAAGATaGCAGGGTTCCCACTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KERVLGAPNTRSRGTLSLSQRQR*QGSHSP Trigger: TGGAGAGTGGGAACCCTGCCATCTTTGCCTCTGGGA...GAGGCTCAGGGTGCCACGGCTGCGGGTGTTAGGAGCACCTAGTACCCTCTCTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR TCA 90 bp | AGCCACTCTGGCTGTTCCCAATCCTGCTCCCGACTCTGCCTCCTGTACAGACACGCGTTCTCGGTAGTCTaGCTGAGTGGCGTTGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: SHSGCSQSCSRLCLLYRHAFSVV*LSGVVL Trigger: GAGTACAACGCCACTCAGTCAGACTACCGAGAACGC...GTGTCTGTACAGGAGGCAGAGTCGGGAGCAGGATTGGGAACAGCCAGAGTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR CCA 90 bp | ACCAAGACCTTTGGTGAAGGGGTAAAGGGAGGTGGCCGTGAGAAGGCAGCACGGTCCCAGAGGCAAAGATaGCAGGGTTCCCACTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TKTFGEGVKGGGREKAARSQRQR*QGSHSP Trigger: TGGAGAGTGGGAACCCTGCCATCTTTGCCTCTGGGA...CCGTGCTGCCTTCTCACGGCCACCTCCCTTTACCCCTTCACCAAAGGTCTTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR TCA 90 bp | AAATGGGCAGCTGGTTGTACCAAGACCTTTGGTGAAGGGGTAAAGGGAGGTGGCGGCCTTCTTGGTGTCTaGCACGGCCCTCTCCACGTA | + |
|
Preference number: 4 (lower is better) Translates to: KWAAGCTKTFGEGVKGGGGLLGV*HGPLHV Trigger: TACGTGGAGAGGGCCGTGTCAGACACCAAGAAGGCC...GCCACCTCCCTTTACCCCTTCACCAAAGGTCTTGGTACAACCAGCTGCCCATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005509.11 |
||
| CDS-3UTR GCA 90 bp | AATCCTGCTCCCGACTCTGCCTCCTGTACAGACACACACTGTCACAAGATCATGCGGGACAGCGTGGAGTaGTGCGTCTTCCGGATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NPAPDSASCTDTHCHKIMRDSVE*CVFRIL Trigger: GAGGATCCGGAAGACGCAGCACTCCACGCTGTCCCG...CATGATCTTGTGACAGTGTGTGTCTGTACAGGAGGCAGAGTCGGGAGCAGGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR GCA 90 bp | AAATGGGCAGCTGGTTGTACCAAGACCTTTGGTGAAGGGGTAAAGGGAGGTGGCCCAGCTGCCTCTGGATaGGCCCTTTGCAGCGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KWAAGCTKTFGEGVKGGGPAASG*ALCSVL Trigger: GAGAACGCTGCAAAGGGCGCATCCAGAGGCAGCTGG...GCCACCTCCCTTTACCCCTTCACCAAAGGTCTTGGTACAACCAGCTGCCCATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR GCA 90 bp | CTGGCTGTTCCCAATCCTGCTCCCGACTCTGCCTCCTGTACAGACACACACTGTATCTCACTGAGGGCCTaGTTCGAGATGCTGGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LAVPNPAPDSASCTDTHCISLRA*FEMLES Trigger: GGACTCCAGCATCTCGAAGCAGGCCCTCAGTGAGAT...ACAGTGTGTGTCTGTACAGGAGGCAGAGTCGGGAGCAGGATTGGGAACAGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR TCA 90 bp | AGCCACTCTGGCTGTTCCCAATCCTGCTCCCGACTCTGCCTCCTGTACAGACACCAAAGAATTCATCCATaGAGCGGTCTCGGTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SHSGCSQSCSRLCLLYRHQRIHP*SGLGPQ Trigger: CTGTGGACCGAGACCGCTTCATGGATGAATTCTTTG...GTGTCTGTACAGGAGGCAGAGTCGGGAGCAGGATTGGGAACAGCCAGAGTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR TCA 90 bp | AAATGGGCAGCTGGTTGTACCAAGACCTTTGGTGAAGGGGTAAAGGGAGGTGGCGCATGGCCATGTCCATaGACATGTCGTGCAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KWAAGCTKTFGEGVKGGGAWPCP*TCRAAP Trigger: GGGAGCTGCACGACATGTTCATGGACATGGCCATGC...GCCACCTCCCTTTACCCCTTCACCAAAGGTCTTGGTACAACCAGCTGCCCATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR GCA 90 bp | TCCTGCTCCCGACTCTGCCTCCTGTACAGACACACACTGTCACAAGATCATGCAAGGACCAGGAGGGAGTaGAGGGTAGGGGTTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SCSRLCLLYRHTLSQDHARTRRE*RVGVQE Trigger: TTCCTGAACCCCTACCCTGCACTCCCTCCTGGTCCT...TGCATGATCTTGTGACAGTGTGTGTCTGTACAGGAGGCAGAGTCGGGAGCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150838.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGCTCCCGACTCTGCCTCCTGTACAGACACACACTGTCACAAGATCATGCACTGCGCGCCTTGCTCTaGTACTTGACGGCCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SCSRLCLLYRHTLSQDHALRALL*YLTAFL Trigger: CAAGAAGGCCGTCAAGTACCAGAGCAAGGCGCGCAG...TGCATGATCTTGTGACAGTGTGTGTCTGTACAGGAGGCAGAGTCGGGAGCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005509.11 |
||
| 3UTR CAA 72 bp | GAACATGACTCCCAGGGCCAGAGACACTGTCAGGCTTaGCCCAAAGAGAGGGTACTAGGTGCTCCTAACACC | + |
|
Preference number: 4 (lower is better) Translates to: EHDSQGQRHCQA*PKERVLGAPNT Trigger: GGTGTTAGGAGCACCTAGTACCCTCTCTTTGGGCAAAGCCTGACAGTGTCTCTGGCCCTGGGAGTCATGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGTACACCTGATACCACGTGGCACATCAATGGGAGACGGGGCAGGGTGAGACAAAGAATTCATCCATaGAGCGGTCTCGGTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SSTPDTTWHINGRRGRVRQRIHP*SGLGPQ Trigger: CTGTGGACCGAGACCGCTTCATGGATGAATTCTTTG...TCTCACCCTGCCCCGTCTCCCATTGATGTGCCACGTGGTATCAGGTGTACTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR CCA 90 bp | CTGTACCCAGCCACTCTGGCTGTTCCCAATCCTGCTCCCGACTCTGCCTCCTGTCAATGCTCTTTAGCTTaGAGCGAACTTTGTTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LYPATLAVPNPAPDSASCQCSLA*SELCSL Trigger: CAGCGAACAAAGTTCGCTCCAAGCTAAAGAGCATTG...ACAGGAGGCAGAGTCGGGAGCAGGATTGGGAACAGCCAGAGTGGCTGGGTACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR GCA 90 bp | ATAAAAATCTCACAAAATGGGCAGCTGGTTGTACCAAGACCTTTGGTGAAGGGGCGCTGTCCTTGGCCGTaGGGAGCTCCTGGGTTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: IKISQNGQLVVPRPLVKGRCPWP*GAPGFG Trigger: ACCGAACCCAGGAGCTCCGCACGGCCAAGGACAGCG...CCCCTTCACCAAAGGTCTTGGTACAACCAGCTGCCCATTTTGTGAGATTTTTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR CCA 90 bp | ACACACACTGTCACAAGATCATGCACACGACACGGCTTGGGGCAGGGTGGTGGGCAATGCTCTTTAGCTTaGAGCGAACTTTGTTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: THTVTRSCTRHGLGQGGGQCSLA*SELCSL Trigger: CAGCGAACAAAGTTCGCTCCAAGCTAAAGAGCATTG...CCCACCACCCTGCCCCAAGCCGTGTCGTGTGCATGATCTTGTGACAGTGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR GCA 90 bp | CTGTACAGACACACACTGTCACAAGATCATGCACACGACACGGCTTGGGGCAGGCTTCCTCCTGCTCGATaGTCTGCTCAATGCTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LYRHTLSQDHAHDTAWGRLPPAR*SAQCSL Trigger: TAAAGAGCATTGAGCAGAGCATCGAGCAGGAGGAAG...CCTGCCCCAAGCCGTGTCGTGTGCATGATCTTGTGACAGTGTGTGTCTGTACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTCCCCACCTTCCAGGTGCCTTGGCATGGTGGGAAGAGCTGGAGAAGCCAGTCGTCATCGCTGTCCTaGGCCGTGCGGAGCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LVPTFQVPWHGGKSWRSQSSSLS*AVRSSW Trigger: CCAGGAGCTCCGCACGGCCAAGGACAGCGATGACGA...CTGGCTTCTCCAGCTCTTCCCACCATGCCAAGGCACCTGGAAGGTGGGGACCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR CAA 90 bp | AGGGCAACCCAGCTAGGTGCAGCAGCCAGGGGCCTCCTCAGGGAGACCCATCCATTCTTCCTGCGCGCCTaGCTCTGGTACTTGACGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RATQLGAAARGLLRETHPFFLRA*LWYLTA Trigger: GGCCGTCAAGTACCAGAGCAAGGCGCGCAGGAAGAA...TGGATGGGTCTCCCTGAGGAGGCCCCTGGCTGCTGCACCTAGCTGGGTTGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005509.11 |
||
| CDS GCA 90 bp | TTCCGGATCCTCAGGTCGGCTGATGAGCGGTTCAGACCTTCCTCCTaGTCGATGCTCTGCTCAATGCTCTCATCGGGGTTCGGGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FRILRSADERFRPSS*SMLCSMLSSGFGEA Trigger: GGCCTCCCCGAACCCCGATGAGAGCATTGAGCAGAGCATCGAGCAGGAGGAAGGTCTGAACCGCTCATCAGCCGACCTGAGGATCCGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201008.4 |
||
| CDS-3UTR CAA 90 bp | TGGCTGTTCCCAATCCTGCTCCCGACTCTGCCTCCTGTACAGACACACACTGTCTCGTCATCGCTGTCCTaGGCCGTGCGGAGCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: WLFPILLPTLPPVQTHTVSSSLS*AVRSSW Trigger: CCAGGAGCTCCGCACGGCCAAGGACAGCGATGACGA...GACAGTGTGTGTCTGTACAGGAGGCAGAGTCGGGAGCAGGATTGGGAACAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR CAA 90 bp | AGCCACTCTGGCTGTTCCCAATCCTGCTCCCGACTCTGCCTCCTGTACAGACACTACTTGACGGCCTTCTaGGTGTCTGACACGGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SHSGCSQSCSRLCLLYRHYLTAF*VSDTAL Trigger: GAGGGCCGTGTCAGACACCAAGAAGGCCGTCAAGTA...GTGTCTGTACAGGAGGCAGAGTCGGGAGCAGGATTGGGAACAGCCAGAGTGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005509.11 |
||
| CDS-3UTR CAA 90 bp | TGGCAGAGAGGGAGCAGTGTGGGATGGGAGGGAAAAGGACTCCCAGCCAGAAGGACGGCGTGCTCCACATaGTACTCGATCCTGTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: WQRGSSVGWEGKGLPARRTACST*YSILSI Trigger: GATTGACAGGATCGAGTACAATGTGGAGCACGCCGT...CCTTCTGGCTGGGAGTCCTTTTCCCTCCCATCCCACACTGCTCCCTCTCTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005509.11 |
||
| CDS GCA 90 bp | TTCCGGATCCTCAGGTCGGCTGATGAGCGGTTCAGACCTTCCTCCTaGTCGATGCTCTGCTCAATGCTCTTTAGCTTGGAGCGAACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: FRILRSADERFRPSS*SMLCSMLFSLERTL Trigger: CAAAGTTCGCTCCAAGCTAAAGAGCATTGAGCAGAGCATCGAGCAGGAGGAAGGTCTGAACCGCTCATCAGCCGACCTGAGGATCCGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR CAA 90 bp | CATGCACTCGCATGCATACTCCTTGCCTGTGGGCGAGAAAGGGGTCCTGGGGCAAGCTTGGAGCGAACTTaGTTCGCTGTCTTCTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: HALACILLACGRERGPGASLERT*FAVFLM Trigger: CATTAAGAAGACAGCGAACAAAGTTCGCTCCAAGCT...TGCCCCAGGACCCCTTTCTCGCCCACAGGCAAGGAGTATGCATGCGAGTGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR CAA 90 bp | AGCCACTCTGGCTGTTCCCAATCCTGCTCCCGACTCTGCCTCCTGTACAGACACTCAATGCTCTTTAGCTaGGAGCGAACTTTGTTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SHSGCSQSCSRLCLLYRHSMLFS*ERTLFA Trigger: AGCGAACAAAGTTCGCTCCAAGCTAAAGAGCATTGA...GTGTCTGTACAGGAGGCAGAGTCGGGAGCAGGATTGGGAACAGCCAGAGTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS-3UTR CAA 90 bp | CTGCTGAATACTGCATCCAGTACACCTGATACCACGTGGCACATCAATGGGAGAAGCTTGGAGCGAACTTaGTTCGCTGTCTTCTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: LLNTASSTPDTTWHINGRSLERT*FAVFLM Trigger: CATTAAGAAGACAGCGAACAAAGTTCGCTCCAAGCT...TCTCCCATTGATGTGCCACGTGGTATCAGGTGTACTGGATGCAGTATTCAGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS GCA 72 bp | CGGCTGATGAGCGGTTCAGACCTTCCTCCTGCTCGATaGTCTGCTCAATGCTCTCATCGGGGTTCGGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RLMSGSDLPPAR*SAQCSHRGSGR Trigger: CCTCCCCGAACCCCGATGAGAGCATTGAGCAGAGCATCGAGCAGGAGGAAGGTCTGAACCGCTCATCAGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201008.4 |
||
| CDS CCA 72 bp | GCTCAATGCTCTCATCGGGGTTCGGGGAGGCCAGGATaGCGCTGTGTTTCCGCTTCACCTCCTCCACGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: AQCSHRGSGRPG*RCVSASPPPRF Trigger: AAAACGTGGAGGAGGTGAAGCGGAAACACAGCGCCATCCTGGCCTCCCCGAACCCCGATGAGAGCATTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201008.4 |
||
| CDS TCA 72 bp | CCTCTGGATGCGCCCTTTGCAGCGTTCTCGGTAGTCTaGCTGAGTGGCGTTGTACTCGGACATGACCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PLDAPFAAFSVV*LSGVVLGHDLH Trigger: GTGGAGGTCATGTCCGAGTACAACGCCACTCAGTCAGACTACCGAGAACGCTGCAAAGGGCGCATCCAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 ENSMUST00000201008.4 |
||
| CDS GCA 72 bp | CTCAGGTCGGCTGATGAGCGGTTCAGACCTTCCTCCTaGTCGATGCTCTGCTCAATGCTCTCATCGGGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LRSADERFRPSS*SMLCSMLSSGF Trigger: GAACCCCGATGAGAGCATTGAGCAGAGCATCGAGCAGGAGGAAGGTCTGAACCGCTCATCAGCCGACCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201008.4 |
||
| CDS CCA 72 bp | CCTTTGTCTTCTCATCGGGGTTCGGGGAGGCCAGGATaGCGCTGTGTTTCCGCTTCACCTCCTCCACGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: PLSSHRGSGRPG*RCVSASPPPRF Trigger: AAAACGTGGAGGAGGTGAAGCGGAAACACAGCGCCATCCTGGCCTCCCCGAACCCCGATGAGAAGACAAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS GCA 72 bp | CTCAGGTCGGCTGATGAGCGGTTCAGACCTTCCTCCTaGTCGATGCTCTGCTCAATGCTCTTTAGCTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LRSADERFRPSS*SMLCSMLFSLE Trigger: CTCCAAGCTAAAGAGCATTGAGCAGAGCATCGAGCAGGAGGAAGGTCTGAACCGCTCATCAGCCGACCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS GCA 72 bp | GGTTCAGACCTTCCTCCTGCTCGATGCTCTGCTCAATaGTCTTTAGCTTGGAGCGAACTTTGTTCGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GSDLPPARCSAQ*SLAWSELCSLS Trigger: AGACAGCGAACAAAGTTCGCTCCAAGCTAAAGAGCATTGAGCAGAGCATCGAGCAGGAGGAAGGTCTGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS GCA 72 bp | GATGAGCGGTTCAGACCTTCCTCCTGCTCGATGCTCTaGTCAATGCTCTTTAGCTTGGAGCGAACTTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: DERFRPSSCSML*SMLFSLERTLF Trigger: GAACAAAGTTCGCTCCAAGCTAAAGAGCATTGAGCAGAGCATCGAGCAGGAGGAAGGTCTGAACCGCTCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS CAA 90 bp | TCCTGCTCGATGCTCTGCTCAATGCTCTTTAGCTTGGAGCGAACTTaGTTCGCTGTCTTCTTAATGTCCGACATGAGCTCCTCCAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SCSMLCSMLFSLERT*FAVFLMSDMSSSSS Trigger: GGAACTGGAGGAGCTCATGTCGGACATTAAGAAGACAGCGAACAAAGTTCGCTCCAAGCTAAAGAGCATTGAGCAGAGCATCGAGCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS CAA 90 bp | TTCAGACCTTCCTCCTGCTCGATGCTCTGCTCAATGCTCTTTAGCTaGGAGCGAACTTTGTTCGCTGTCTTCTTAATGTCCGACATGAGC | + |
|
Preference number: 6 (lower is better) Translates to: FRPSSCSMLCSMLFS*ERTLFAVFLMSDMS Trigger: GCTCATGTCGGACATTAAGAAGACAGCGAACAAAGTTCGCTCCAAGCTAAAGAGCATTGAGCAGAGCATCGAGCAGGAGGAAGGTCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS CAA 72 bp | TCCTCCTGCTCGATGCTCTGCTCAATGCTCTTTAGCTaGGAGCGAACTTTGTTCGCTGTCTTCTTAATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSCSMLCSMLFS*ERTLFAVFLMS Trigger: GGACATTAAGAAGACAGCGAACAAAGTTCGCTCCAAGCTAAAGAGCATTGAGCAGAGCATCGAGCAGGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||
| CDS CAA 72 bp | ATGCTCTGCTCAATGCTCTTTAGCTTGGAGCGAACTTaGTTCGCTGTCTTCTTAATGTCCGACATGAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: MLCSMLFSLERT*FAVFLMSDMSS Trigger: GGAGCTCATGTCGGACATTAAGAAGACAGCGAACAAAGTTCGCTCCAAGCTAAAGAGCATTGAGCAGAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005509.11 ENSMUST00000150838.2 |
||