Pregenerated sensors for STX17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061455Ensembl transcript IDs: ENSMUST00000064765.6, ENSMUST00000107720.9, ENSMUST00000107721.8, ENSMUST00000153502.8
Found 219 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACAGATGTGAGGTAGAAAGCTCCTTCTTGGACGCCCAAGAAGACTaGGGGGCGGCAATCCCTGGAGGCAGCAGGTATGCCAGCCCCTTC | + |
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Preference number: 1 (lower is better) Translates to: DRCEVESSFLDAQED*GAAIPGGSRYASPF Trigger: GAAGGGGCTGGCATACCTGCTGCCTCCAGGGATTGCCGCCCCTCAGTCTTCTTGGGCGTCCAAGAAGGAGCTTTCTACCTCACATCTGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR GCA 90 bp | CCCACATTCCCACACTGGCTCAGCGAAGATGCGCGGTCCCAAGGGTaGGAGCTTCATATCCAAGCCTCAGCCCTGTTTCTTTGGCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: PTFPHWLSEDARSQG*ELHIQASALFLWLP Trigger: TGGAAGCCAAAGAAACAGGGCTGAGGCTTGGATATGAAGCTCGCACCCTTGGGACCGCGCATCTTCGCTGAGCCAGTGTGGGAATGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR CCA 90 bp | CTGCTGGCCTTACAAGTCTCTGAGCTTCAGGGAGGCAGCACAGCATaGCAGAGTGTGGCTCAGCAGAACCCATTCCATCCAGGCTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: LLALQVSELQGGSTA*QSVAQQNPFHPGFL Trigger: CAGGAAGCCTGGATGGAATGGGTTCTGCTGAGCCACACTCTGCCATGCTGTGCTGCCTCCCTGAAGCTCAGAGACTTGTAAGGCCAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR CCA 90 bp | TACAAGTCTCTGAGCTTCAGGGAGGCAGCACAGCATGGCAGAGTGTaGCTCAGCAGAACCCATTCCATCCAGGCTTCCTGCCCTTGGAAT | + |
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Preference number: 1 (lower is better) Translates to: YKSLSFREAAQHGRV*LSRTHSIQASCPWN Trigger: ATTCCAAGGGCAGGAAGCCTGGATGGAATGGGTTCTGCTGAGCCACACTCTGCCATGCTGTGCTGCCTCCCTGAAGCTCAGAGACTTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR TCA 90 bp | CAAGTAGTTCACCCGTGCCCCCTGTTGAGCGGCAACATCCCTACCTaGCAGAGACTCCTGAACTCGAATTCTGTTCCTCCCTATAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: QVVHPCPLLSGNIPT*QRLLNSNSVPPYRK Trigger: CTTCCTATAGGGAGGAACAGAATTCGAGTTCAGGAGTCTCTGTCAGGTAGGGATGTTGCCGCTCAACAGGGGGCACGGGTGAACTACTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
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| 3UTR CCA 90 bp | TCCCAAGGGTGCGAGCTTCATATCCAAGCCTCAGCCCTGTTTCTTTaGCTTCCATGTGCTGAGGCTGTTATGGCACTTACTGATGGCACT | + |
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Preference number: 1 (lower is better) Translates to: SQGCELHIQASALFL*LPCAEAVMALTDGT Trigger: AGTGCCATCAGTAAGTGCCATAACAGCCTCAGCACATGGAAGCCAAAGAAACAGGGCTGAGGCTTGGATATGAAGCTCGCACCCTTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR TCA 90 bp | GCTCCTGTGTGTGAGGTAGGAGTAAGCCAACAGAAGACACAGAATTaGGATGGGGAGAGAATTGGGTCACAAGGTATGGGAAACCAGTCT | + |
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Preference number: 1 (lower is better) Translates to: APVCEVGVSQQKTQN*DGERIGSQGMGNQS Trigger: AGACTGGTTTCCCATACCTTGTGACCCAATTCTCTCCCCATCTCAATTCTGTGTCTTCTGTTGGCTTACTCCTACCTCACACACAGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR CCA 90 bp | CTGAATCTCAAACCTTTCTGTTTTGAGAGAGACACGGAGTTGAAGTaGACATGCCTGCTGTGCATGCCAACTGTTGGGTTAGCACCACAG | + |
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Preference number: 1 (lower is better) Translates to: LNLKPFCFERDTELK*TCLLCMPTVGLAPQ Trigger: CTGTGGTGCTAACCCAACAGTTGGCATGCACAGCAGGCATGTCCACTTCAACTCCGTGTCTCTCTCAAAACAGAAAGGTTTGAGATTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR CCA 90 bp | AGAGTGTGGCTCAGCAGAACCCATTCCATCCAGGCTTCCTGCCCTTaGAATGAATGGAAAGACTGCAAATTACTTAATTCCTCTGAGGCC | + |
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Preference number: 1 (lower is better) Translates to: RVWLSRTHSIQASCP*NEWKDCKLLNSSEA Trigger: GGCCTCAGAGGAATTAAGTAATTTGCAGTCTTTCCATTCATTCCAAGGGCAGGAAGCCTGGATGGAATGGGTTCTGCTGAGCCACACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR GCA 90 bp | CATGGCAGAGTGTGGCTCAGCAGAACCCATTCCATCCAGGCTTCCTaGCCTTGGAATGAATGGAAAGACTGCAAATTACTTAATTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: HGRVWLSRTHSIQAS*PWNEWKDCKLLNSS Trigger: AGAGGAATTAAGTAATTTGCAGTCTTTCCATTCATTCCAAGGGCAGGAAGCCTGGATGGAATGGGTTCTGCTGAGCCACACTCTGCCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR CCA 90 bp | AGAAGACACAGAATTGAGATGGGGAGAGAATTGGGTCACAAGGTATaGGAAACCAGTCTGAGGCCGACACACTGGATGTGGCTTTTCTTA | + |
|
Preference number: 1 (lower is better) Translates to: RRHRIEMGRELGHKV*ETSLRPTHWMWLFL Trigger: TAAGAAAAGCCACATCCAGTGTGTCGGCCTCAGACTGGTTTCCCATACCTTGTGACCCAATTCTCTCCCCATCTCAATTCTGTGTCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR CCA 90 bp | GGGATAGCAGTGTTCATTTTATACTTAAGCTCTGTGTTCTATGCATaGCCACAATTAAGAACAGGCTGTGGACACCCGATGAGGCCAGAA | + |
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Preference number: 1 (lower is better) Translates to: GIAVFILYLSSVFYA*PQLRTGCGHPMRPE Trigger: TTCTGGCCTCATCGGGTGTCCACAGCCTGTTCTTAATTGTGGCCATGCATAGAACACAGAGCTTAAGTATAAAATGAACACTGCTATCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR TCA 90 bp | CTCTCCAGAGGCCATGTGATCAGTGAAGGGCTTCTGAGGCATTCTTaGGAAATGCCTTTGTTTTCTAACAACTCAAAAGGTTTGGCTTCT | + |
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Preference number: 1 (lower is better) Translates to: LSRGHVISEGLLRHS*EMPLFSNNSKGLAS Trigger: AGAAGCCAAACCTTTTGAGTTGTTAGAAAACAAAGGCATTTCTCAAGAATGCCTCAGAAGCCCTTCACTGATCACATGGCCTCTGGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
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| 3UTR GCA 90 bp | ATCCTTAGTTATGGATCCAGTTTTCACATTTCCAGGCCTAACCTTTaGTCTTTGGCAGTCTTTAAACTTGACCTGACAGACACCCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: ILSYGSSFHISRPNL*SLAVFKLDLTDTLW Trigger: CCAGAGGGTGTCTGTCAGGTCAAGTTTAAAGACTGCCAAAGAGCAAAGGTTAGGCCTGGAAATGTGAAAACTGGATCCATAACTAAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
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| 3UTR TCA 90 bp | CAAGCATCACTCAGCAACATAACAGCAAACAAATGCAGAAAGGATTaGGTTTTGCACAAGTCCCCACCGTTTAACCTTTCCTTGTCCTTA | + |
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Preference number: 1 (lower is better) Translates to: QASLSNITANKCRKD*VLHKSPPFNLSLSL Trigger: TAAGGACAAGGAAAGGTTAAACGGTGGGGACTTGTGCAAAACTCAATCCTTTCTGCATTTGTTTGCTGTTATGTTGCTGAGTGATGCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR CAA 90 bp | GTCCTGCTCAAACAAGAGTGCTCACAGGAGCCCATAGGCCTTCCCTaGCTGTTGCAGGGATCCTCGTGCTTTGGCTGCCAAGGCACTGGC | + |
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Preference number: 2 (lower is better) Translates to: VLLKQECSQEPIGLP*LLQGSSCFGCQGTG Trigger: GCCAGTGCCTTGGCAGCCAAAGCACGAGGATCCCTGCAACAGCAAGGGAAGGCCTATGGGCTCCTGTGAGCACTCTTGTTTGAGCAGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR CAA 90 bp | CTCAAACAAGAGTGCTCACAGGAGCCCATAGGCCTTCCCTTGCTGTaGCAGGGATCCTCGTGCTTTGGCTGCCAAGGCACTGGCACTGCT | + |
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Preference number: 2 (lower is better) Translates to: LKQECSQEPIGLPLL*QGSSCFGCQGTGTA Trigger: AGCAGTGCCAGTGCCTTGGCAGCCAAAGCACGAGGATCCCTGCAACAGCAAGGGAAGGCCTATGGGCTCCTGTGAGCACTCTTGTTTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR-3UTR TCA 90 bp | ACATGCCTGCTGTGCATGCCAACTGTTGGGTTAGCACCACAGATCTTTCCTTGGGACGCCCAAGAAGACTaGGGGGCGGCAATCCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: TCLLCMPTVGLAPQIFPWDAQED*GAAIPG Trigger: TCCAGGGATTGCCGCCCCTCAGTCTTCTTGGGCGTC...CCAAGGAAAGATCTGTGGTGCTAACCCAACAGTTGGCATGCACAGCAGGCATGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR-3UTR CCA 90 bp | AGCAGAACCCATTCCATCCAGGCTTCCTGCCCTTGGAATGAATGGAAAGACTGCGGAGGGGAGACGGCCTaGGAAAGGGCAGCAGTGACA | + |
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Preference number: 2 (lower is better) Translates to: SRTHSIQASCPWNEWKDCGGETA*ERAAVT Trigger: TGTCACTGCTGCCCTTTCCCAGGCCGTCTCCCCTCC...GCAGTCTTTCCATTCATTCCAAGGGCAGGAAGCCTGGATGGAATGGGTTCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR-3UTR GCA 90 bp | CAGCACAGCATGGCAGAGTGTGGCTCAGCAGAACCCATTCCATCCAGGCTTCCTGGAAGAGATGAGAGTTaGGGGACCAGTGGCTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: QHSMAECGSAEPIPSRLPGRDES*GTSGFF Trigger: GAAGAAGCCACTGGTCCCGCAACTCTCATCTCTTCC...AGGAAGCCTGGATGGAATGGGTTCTGCTGAGCCACACTCTGCCATGCTGTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR-3UTR TCA 90 bp | TTGCCCAGGAGGGTCTTGCTCCAGGCTTTCACTCCTCTCTCCAGAGGCCATGTGTCAGTGAAGGGCTTCTaGGGCATTCTTGAGAAATGC | + |
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Preference number: 2 (lower is better) Translates to: LPRRVLLQAFTPLSRGHVSVKGF*GILEKC Trigger: GCATTTCTCAAGAATGCCTCAGAAGCCCTTCACTGA...CACATGGCCTCTGGAGAGAGGAGTGAAAGCCTGGAGCAAGACCCTCCTGGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCACAGCATGGCAGAGTGTGGCTCAGCAGAACCCATTCCATCCAGGCTTCCTTCAGCCCTGTTTCTTTaGCTTCCATGTGCTGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: QHSMAECGSAEPIPSRLPSALFL*LPCAEA Trigger: AGCCTCAGCACATGGAAGCCAAAGAAACAGGGCTGA...AGGAAGCCTGGATGGAATGGGTTCTGCTGAGCCACACTCTGCCATGCTGTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR-3UTR TCA 90 bp | CCCAAGGGTGCGAGCTTCATATCCAAGCCTCAGCCCTGTTTCTTTGGCTTCCATAGGCCATGTGATCAGTaGAGGGCTTCTGAGGCATTC | + |
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Preference number: 2 (lower is better) Translates to: PKGASFISKPQPCFFGFHRPCDQ*RASEAF Trigger: GAATGCCTCAGAAGCCCTTCACTGATCACATGGCCT...ATGGAAGCCAAAGAAACAGGGCTGAGGCTTGGATATGAAGCTCGCACCCTTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR-3UTR CCA 90 bp | TTGCCCAGGAGGGTCTTGCTCCAGGCTTTCACTCCTCTCTCCAGAGGCCATGTGGACACAGAATTGAGATaGGGAGAGAATTGGGTCACA | + |
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Preference number: 2 (lower is better) Translates to: LPRRVLLQAFTPLSRGHVDTELR*GENWVT Trigger: TGTGACCCAATTCTCTCCCCATCTCAATTCTGTGTC...CACATGGCCTCTGGAGAGAGGAGTGAAAGCCTGGAGCAAGACCCTCCTGGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR CAA 90 bp | GAATCTGAAGCCAGAGGGGAAGCACTTGCTAGGCCTCAGGCAACTTaGGGGATGTCACCAGACATGTGTAAACACCTGGGAGCAACAGTA | + |
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Preference number: 2 (lower is better) Translates to: ESEARGEALARPQAT*GMSPDMCKHLGATV Trigger: TACTGTTGCTCCCAGGTGTTTACACATGTCTGGTGACATCCCCAAAGTTGCCTGAGGCCTAGCAAGTGCTTCCCCTCTGGCTTCAGATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCACAGCATGGCAGAGTGTGGCTCAGCAGAACCCATTCCATCCAGGCTTCCTAACTGGCAAACTGCTTaGGAAACACCAGTTCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: QHSMAECGSAEPIPSRLPNWQTA*ETPVLP Trigger: AGGAAGAACTGGTGTTTCCCAAGCAGTTTGCCAGTT...AGGAAGCCTGGATGGAATGGGTTCTGCTGAGCCACACTCTGCCATGCTGTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR-3UTR TCA 90 bp | TTGCCCAGGAGGGTCTTGCTCCAGGCTTTCACTCCTCTCTCCAGAGGCCATGTGCTTCTGAGGCATTCTTaGGAAATGCCTTTGTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: LPRRVLLQAFTPLSRGHVLLRHS*EMPLFS Trigger: AGAAAACAAAGGCATTTCTCAAGAATGCCTCAGAAG...CACATGGCCTCTGGAGAGAGGAGTGAAAGCCTGGAGCAAGACCCTCCTGGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
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| 3UTR-3UTR CCA 90 bp | ATACAAAAAGAATCTGAAGCCAGAGGGGAAGCACTTGCTAGGCCTCAGGCAACTCATGAACACGGAAGGTaGACAGGCAGGACAGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: IQKESEARGEALARPQATHEHGR*TGRTAV Trigger: CACAGCTGTCCTGCCTGTCCACCTTCCGTGTTCATG...AGTTGCCTGAGGCCTAGCAAGTGCTTCCCCTCTGGCTTCAGATTCTTTTTGTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
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| 3UTR CAA 90 bp | CACCAGCTGGAAATGGGCTTGGTGGCTGGTTTAGTAGGTCTAGCATaGAGGTTTTGTGCTCCTTATCTGGAGAGGCAGGAAAGACTTCAG | + |
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Preference number: 2 (lower is better) Translates to: HQLEMGLVAGLVGLA*RFCAPYLERQERLQ Trigger: CTGAAGTCTTTCCTGCCTCTCCAGATAAGGAGCACAAAACCTCAATGCTAGACCTACTAAACCAGCCACCAAGCCCATTTCCAGCTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR-3UTR TCA 90 bp | CGTGTTAATAGCAGTTACAAAACAGAGTTGGATGTGCGTAATCCCAGCAGGAGGGGCAACATCCCTACCTaGCAGAGACTCCTGAACTCG | + |
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Preference number: 2 (lower is better) Translates to: RVNSSYKTELDVRNPSRRGNIPT*QRLLNS Trigger: CGAGTTCAGGAGTCTCTGTCAGGTAGGGATGTTGCC...CCTCCTGCTGGGATTACGCACATCCAACTCTGTTTTGTAACTGCTATTAACACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR-3UTR TCA 90 bp | ACATGCCTGCTGTGCATGCCAACTGTTGGGTTAGCACCACAGATCTTTCCTTGGCATACAAAAAGAATCTaGAGCCAGAGGGGAAGCACT | + |
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Preference number: 2 (lower is better) Translates to: TCLLCMPTVGLAPQIFPWHTKRI*SQRGST Trigger: AGTGCTTCCCCTCTGGCTTCAGATTCTTTTTGTATG...CCAAGGAAAGATCTGTGGTGCTAACCCAACAGTTGGCATGCACAGCAGGCATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR-3UTR CCA 90 bp | AAACAGAAACAACACAACTCCACATACAAAAAGAATCTGAAGCCAGAGGGGAAGCTGACAGACACCCTCTaGCCAGGCTCCTCCACCTCT | + |
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Preference number: 2 (lower is better) Translates to: KQKQHNSTYKKNLKPEGKLTDTL*PGSSTS Trigger: AGAGGTGGAGGAGCCTGGCCAGAGGGTGTCTGTCAG...CTTCCCCTCTGGCTTCAGATTCTTTTTGTATGTGGAGTTGTGTTGTTTCTGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR CAA 90 bp | AGTTATGGATCCAGTTTTCACATTTCCAGGCCTAACCTTTGCTCTTaGGCAGTCTTTAAACTTGACCTGACAGACACCCTCTGGCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: SYGSSFHISRPNLCS*AVFKLDLTDTLWPG Trigger: GCCTGGCCAGAGGGTGTCTGTCAGGTCAAGTTTAAAGACTGCCAAAGAGCAAAGGTTAGGCCTGGAAATGTGAAAACTGGATCCATAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
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| 3UTR CAA 90 bp | CCTGCTGTGCATGCCAACTGTTGGGTTAGCACCACAGATCTTTCCTaGGGTCTGAATCATGAGTTTTCCCATCTAGAATGTGAGAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: PAVHANCWVSTTDLS*GLNHEFSHLECERG Trigger: ACCTCTCTCACATTCTAGATGGGAAAACTCATGATTCAGACCCAAGGAAAGATCTGTGGTGCTAACCCAACAGTTGGCATGCACAGCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR-3UTR TCA 90 bp | AGCAGAACCCATTCCATCCAGGCTTCCTGCCCTTGGAATGAATGGAAAGACTGCTCAAAAGCCCAATACTaGTGGTTCATTAACATGCCG | + |
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Preference number: 2 (lower is better) Translates to: SRTHSIQASCPWNEWKDCSKAQY*WFINMP Trigger: CGGCATGTTAATGAACCATCAGTATTGGGCTTTTGA...GCAGTCTTTCCATTCATTCCAAGGGCAGGAAGCCTGGATGGAATGGGTTCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR-3UTR GCA 90 bp | AACCTTTGCTCTTTGGCAGTCTTTAAACTTGACCTGACAGACACCCTCTGGCCATTCCAGTCCTCACTCTaGAGAAGACATGAACACGGA | + |
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Preference number: 2 (lower is better) Translates to: NLCSLAVFKLDLTDTLWPFQSSL*RRHEHG Trigger: TCCGTGTTCATGTCTTCTGCAGAGTGAGGACTGGAA...TGGCCAGAGGGTGTCTGTCAGGTCAAGTTTAAAGACTGCCAAAGAGCAAAGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGGAAAGGGCAGCAGTGACAGATGTGAGGTAGAAAGCTCCTTCTTGGACGCCAGTTCTTATGTGAAATaGTGCCAACTGGTGAATACA | + |
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Preference number: 2 (lower is better) Translates to: LGKGSSDRCEVESSFLDASSYVK*CQLVNT Trigger: TGTATTCACCAGTTGGCACCATTTCACATAAGAACT...GGCGTCCAAGAAGGAGCTTTCTACCTCACATCTGTCACTGCTGCCCTTTCCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR CAA 90 bp | TTTCTTCTGAATCTCAAACCTTTCTGTTTTGAGAGAGACACGGAGTaGAAGTGGACATGCCTGCTGTGCATGCCAACTGTTGGGTTAGCA | + |
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Preference number: 2 (lower is better) Translates to: FLLNLKPFCFERDTE*KWTCLLCMPTVGLA Trigger: TGCTAACCCAACAGTTGGCATGCACAGCAGGCATGTCCACTTCAACTCCGTGTCTCTCTCAAAACAGAAAGGTTTGAGATTCAGAAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR-3UTR TCA 90 bp | GTGTTAATAGCAGTTACAAAACAGAGTTGGATGTGCGTAATCCCAGCAGGAGGATCAGTGAAGGGCTTCTaGGGCATTCTTGAGAAATGC | + |
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Preference number: 2 (lower is better) Translates to: VLIAVTKQSWMCVIPAGGSVKGF*GILEKC Trigger: GCATTTCTCAAGAATGCCTCAGAAGCCCTTCACTGA...TCCTCCTGCTGGGATTACGCACATCCAACTCTGTTTTGTAACTGCTATTAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGAGGCTGTTATGGCACTTACTGATGGCACTTTGGGGATTCATGGAATTGAGTCCAGGCCTAACCTTTaGTCTTTGGCAGTCTTTAAA | + |
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Preference number: 2 (lower is better) Translates to: AEAVMALTDGTLGIHGIESRPNL*SLAVFK Trigger: TTTAAAGACTGCCAAAGAGCAAAGGTTAGGCCTGGA...CTCAATTCCATGAATCCCCAAAGTGCCATCAGTAAGTGCCATAACAGCCTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR-3UTR CCA 90 bp | GCAACTTTGGGGATGTCACCAGACATGTGTAAACACCTGGGAGCAACAGTAGCACTTCTGGACTTTTACTaGAAGGAAATACTGTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: ATLGMSPDMCKHLGATVALLDFY*KEILCA Trigger: AGCACACAGTATTTCCTTCCAGTAAAAGTCCAGAAG...TGCTACTGTTGCTCCCAGGTGTTTACACATGTCTGGTGACATCCCCAAAGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
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| 3UTR-3UTR CCA 90 bp | GCAACTTTGGGGATGTCACCAGACATGTGTAAACACCTGGGAGCAACAGTAGCAACAACTCAAAAGGTTTaGCTTCTGGACTTTTACTGG | + |
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Preference number: 2 (lower is better) Translates to: ATLGMSPDMCKHLGATVATTQKV*LLDFYW Trigger: CCAGTAAAAGTCCAGAAGCCAAACCTTTTGAGTTGT...TGCTACTGTTGCTCCCAGGTGTTTACACATGTCTGGTGACATCCCCAAAGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
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| 3UTR-3UTR GCA 90 bp | ATACGTGTTAATAGCAGTTACAAAACAGAGTTGGATGTGCGTAATCCCAGCAGGTTCCAGTCCTCACTCTaGAGAAGACATGAACACGGA | + |
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Preference number: 2 (lower is better) Translates to: IRVNSSYKTELDVRNPSRFQSSL*RRHEHG Trigger: TCCGTGTTCATGTCTTCTGCAGAGTGAGGACTGGAA...CCTGCTGGGATTACGCACATCCAACTCTGTTTTGTAACTGCTATTAACACGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
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| 3UTR-3UTR TCA 90 bp | AATAGCAGTTACAAAACAGAGTTGGATGTGCGTAATCCCAGCAGGAGGATTGCAGCTTCCAGTAAAACCTaGTTTCAGAAAACAGAAACA | + |
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Preference number: 2 (lower is better) Translates to: NSSYKTELDVRNPSRRIAASSKT*FQKTET Trigger: TGTTTCTGTTTTCTGAAATCAGGTTTTACTGGAAGC...TGCAATCCTCCTGCTGGGATTACGCACATCCAACTCTGTTTTGTAACTGCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
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| 3UTR-3UTR CCA 90 bp | ATGTTTGAGATGTGTATGCAAAAAGCAAACTATTGTGTGTCCTGCTCAAACAAGCCGACACACTGGATGTaGCTTTTCTTATTTAACATG | + |
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Preference number: 2 (lower is better) Translates to: MFEMCMQKANYCVSCSNKPTHWM*LFLFNM Trigger: CATGTTAAATAAGAAAAGCCACATCCAGTGTGTCGG...CTTGTTTGAGCAGGACACACAATAGTTTGCTTTTTGCATACACATCTCAAACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| 3UTR TCA 72 bp | GAGGTAGAAAGCTCCTTCTTGGACGCCCAAGAAGACTaGGGGGCGGCAATCCCTGGAGGCAGCAGGTATGCC | + |
|
Preference number: 3 (lower is better) Translates to: EVESSFLDAQED*GAAIPGGSRYA Trigger: GGCATACCTGCTGCCTCCAGGGATTGCCGCCCCTCAGTCTTCTTGGGCGTCCAAGAAGGAGCTTTCTACCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR CCA 72 bp | CTGAGCTTCAGGGAGGCAGCACAGCATGGCAGAGTGTaGCTCAGCAGAACCCATTCCATCCAGGCTTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LSFREAAQHGRV*LSRTHSIQASC Trigger: GCAGGAAGCCTGGATGGAATGGGTTCTGCTGAGCCACACTCTGCCATGCTGTGCTGCCTCCCTGAAGCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR-3UTR CAA 90 bp | TTGCCCAGGAGGGTCTTGCTCCAGGCTTTCACTCCTCTCTCCAGAGGCCATGTGTTGCCCAGGAGGGTCTaGCTCCAGGCTTTCACTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LPRRVLLQAFTPLSRGHVLPRRV*LQAFTP Trigger: AGGAGTGAAAGCCTGGAGCAAGACCCTCCTGGGCAA...CACATGGCCTCTGGAGAGAGGAGTGAAAGCCTGGAGCAAGACCCTCCTGGGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| 3UTR TCA 72 bp | CACCCGTGCCCCCTGTTGAGCGGCAACATCCCTACCTaGCAGAGACTCCTGAACTCGAATTCTGTTCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: HPCPLLSGNIPT*QRLLNSNSVPP Trigger: GGGAGGAACAGAATTCGAGTTCAGGAGTCTCTGTCAGGTAGGGATGTTGCCGCTCAACAGGGGGCACGGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| 3UTR TCA 72 bp | CAGCATGGGTTGTCCCCTGCTGGCCTTACAAGTCTCTaGGCTTCAGGGAGGCAGCACAGCATGGCAGAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: QHGLSPAGLTSL*ASGRQHSMAEC Trigger: ACACTCTGCCATGCTGTGCTGCCTCCCTGAAGCTCAGAGACTTGTAAGGCCAGCAGGGGACAACCCATGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR GCA 72 bp | GGAGAGCCACTTCCTAACACTTCCAGCAACAGCAACTaGTCCTTAGCTCGGTGCACAGCAGCAGCTGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: GEPLPNTSSNSN*SLARCTAAAGS Trigger: GCTTCCAGCTGCTGCTGTGCACCGAGCTAAGGAGCAGTTGCTGTTGCTGGAAGTGTTAGGAAGTGGCTCTCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| 3UTR CCA 72 bp | CTAAGAGGTAACCCTTCGGCCCCTGACCCTGTGCTCTaGCTGCTGGTGCACTCTTCTCAGGAAGAGATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LRGNPSAPDPVL*LLVHSSQEEMR Trigger: TCTCATCTCTTCCTGAGAAGAGTGCACCAGCAGCCAGAGCACAGGGTCAGGGGCCGAAGGGTTACCTCTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR TCA 72 bp | TGCTCTGGCTGCTGGTGCACTCTTCTCAGGAAGAGATaGGAGTTGCGGGACCAGTGGCTTCTTCCTATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: CSGCWCTLLRKR*ELRDQWLLPIP Trigger: AGGAATAGGAAGAAGCCACTGGTCCCGCAACTCTCATCTCTTCCTGAGAAGAGTGCACCAGCAGCCAGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR CCA 72 bp | GATGAGGCCAGAAGACAAAGAAGTAAACGGACAGCATaGGTTGTCCCCTGCTGGCCTTACAAGTCTCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: DEARRQRSKRTA*VVPCWPYKSLS Trigger: GCTCAGAGACTTGTAAGGCCAGCAGGGGACAACCCATGCTGTCCGTTTACTTCTTTGTCTTCTGGCCTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR GCA 72 bp | TTATCAGTAGGTGTTACCAGCTTCCAGTCCTCACTCTaGAGAAGACATGAACACGGAAGGTGGACAGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LSVGVTSFQSSL*RRHEHGRWTGR Trigger: CCTGCCTGTCCACCTTCCGTGTTCATGTCTTCTGCAGAGTGAGGACTGGAAGCTGGTAACACCTACTGATAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| 3UTR GCA 72 bp | GCTGCTGGTGCACTCTTCTCAGGAAGAGATGAGAGTTaGGGGACCAGTGGCTTCTTCCTATTCCTTTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: AAGALFSGRDES*GTSGFFLFLSS Trigger: AGAAGAAAGGAATAGGAAGAAGCCACTGGTCCCGCAACTCTCATCTCTTCCTGAGAAGAGTGCACCAGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR CCA 72 bp | AGAATTGAGATGGGGAGAGAATTGGGTCACAAGGTATaGGAAACCAGTCTGAGGCCGACACACTGGATGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RIEMGRELGHKV*ETSLRPTHWMW Trigger: CCACATCCAGTGTGTCGGCCTCAGACTGGTTTCCCATACCTTGTGACCCAATTCTCTCCCCATCTCAATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR TCA 72 bp | GGCTTTCACTCCTCTCTCCAGAGGCCATGTGATCAGTaGAGGGCTTCTGAGGCATTCTTGAGAAATGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: GFHSSLQRPCDQ*RASEAFLRNAF Trigger: AAAGGCATTTCTCAAGAATGCCTCAGAAGCCCTTCACTGATCACATGGCCTCTGGAGAGAGGAGTGAAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| 3UTR CCA 72 bp | GTTGAAGTGGACATGCCTGCTGTGCATGCCAACTGTTaGGTTAGCACCACAGATCTTTCCTTGGGTCTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: VEVDMPAVHANC*VSTTDLSLGLN Trigger: ATTCAGACCCAAGGAAAGATCTGTGGTGCTAACCCAACAGTTGGCATGCACAGCAGGCATGTCCACTTCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR CCA 72 bp | GGGGCCAAAGTTCAAGAATCTTGTTTTAGCTGGGTATaGCAACACACCTTTAATCCCAGCACTCCGGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GAKVQESCFSWV*QHTFNPSTPEA Trigger: TGCCTCCGGAGTGCTGGGATTAAAGGTGTGTTGCCATACCCAGCTAAAACAAGATTCTTGAACTTTGGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR CCA 72 bp | TGCGAGCTTCATATCCAAGCCTCAGCCCTGTTTCTTTaGCTTCCATGTGCTGAGGCTGTTATGGCACTTACT | + |
|
Preference number: 3 (lower is better) Translates to: CELHIQASALFL*LPCAEAVMALT Trigger: AGTAAGTGCCATAACAGCCTCAGCACATGGAAGCCAAAGAAACAGGGCTGAGGCTTGGATATGAAGCTCGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR GCA 72 bp | ATCCAGGCTTCCTGCCCTTGGAATGAATGGAAAGACTaGAAATTACTTAATTCCTCTGAGGCCCGGTTACCC | + |
|
Preference number: 3 (lower is better) Translates to: IQASCPWNEWKD*KLLNSSEARLP Trigger: GGGTAACCGGGCCTCAGAGGAATTAAGTAATTTGCAGTCTTTCCATTCATTCCAAGGGCAGGAAGCCTGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR GCA 72 bp | GTGTGGCTCAGCAGAACCCATTCCATCCAGGCTTCCTaGCCTTGGAATGAATGGAAAGACTGCAAATTACTT | + |
|
Preference number: 3 (lower is better) Translates to: VWLSRTHSIQAS*PWNEWKDCKLL Trigger: AAGTAATTTGCAGTCTTTCCATTCATTCCAAGGGCAGGAAGCCTGGATGGAATGGGTTCTGCTGAGCCACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR GCA 72 bp | AAAAGCAAACTATTGTGTGTCCTGCTCAAACAAGAGTaGTCACAGGAGCCCATAGGCCTTCCCTTGCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: KSKLLCVLLKQE*SQEPIGLPLLL Trigger: CAACAGCAAGGGAAGGCCTATGGGCTCCTGTGAGCACTCTTGTTTGAGCAGGACACACAATAGTTTGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR CCA 72 bp | CCCTGTTTCTTTGGCTTCCATGTGCTGAGGCTGTTATaGCACTTACTGATGGCACTTTGGGGATTCATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: PCFFGFHVLRLL*HLLMALWGFME Trigger: TTCCATGAATCCCCAAAGTGCCATCAGTAAGTGCCATAACAGCCTCAGCACATGGAAGCCAAAGAAACAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR CCA 72 bp | GCTGAGAGAGTGCAAGCTTCATCAGGCAACTTGACATaGCCTAACCAAACCTTAATAGACACGCATGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: AERVQASSGNLT*PNQTLIDTHGG Trigger: TCCTCCATGCGTGTCTATTAAGGTTTGGTTAGGCCATGTCAAGTTGCCTGATGAAGCTTGCACTCTCTCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGAACCCATTCCATCCAGGCTTCCTGCCCTTGGAATGAATGGAAAGACTGCATACGGTGTAGTTCTTaGTTTCATAGGGATGCACTG | + |
|
Preference number: 3 (lower is better) Translates to: SRTHSIQASCPWNEWKDCIRCSS*FHRDAL Trigger: CAGTGCATCCCTATGAAACAAAGAACTACACCGTAT...GCAGTCTTTCCATTCATTCCAAGGGCAGGAAGCCTGGATGGAATGGGTTCTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR TCA 72 bp | TGTGAGGTAGGAGTAAGCCAACAGAAGACACAGAATTaGGATGGGGAGAGAATTGGGTCACAAGGTATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: CEVGVSQQKTQN*DGERIGSQGMG Trigger: TCCCATACCTTGTGACCCAATTCTCTCCCCATCTCAATTCTGTGTCTTCTGTTGGCTTACTCCTACCTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR GCA 72 bp | GGTGGCTGGTTTAGTAGGTCTAGCATTGAGGTTTTGTaGTCCTTATCTGGAGAGGCAGGAAAGACTTCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: GGWFSRSSIEVL*SLSGEAGKTSE Trigger: TTCTGAAGTCTTTCCTGCCTCTCCAGATAAGGAGCACAAAACCTCAATGCTAGACCTACTAAACCAGCCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR GCA 72 bp | GGATGCATTCTGAATGCCCCCTGCTCAGGTTTGACATaGTATCTTAAAGGAGCAGCAAGAACCAGAGAACAA | + |
|
Preference number: 3 (lower is better) Translates to: GCILNAPCSGLT*YLKGAARTREQ Trigger: TTGTTCTCTGGTTCTTGCTGCTCCTTTAAGATAGCATGTCAAACCTGAGCAGGGGGCATTCAGAATGCATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR CCA 72 bp | AAACCTTTCTGTTTTGAGAGAGACACGGAGTTGAAGTaGACATGCCTGCTGTGCATGCCAACTGTTGGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: KPFCFERDTELK*TCLLCMPTVGL Trigger: TAACCCAACAGTTGGCATGCACAGCAGGCATGTCCACTTCAACTCCGTGTCTCTCTCAAAACAGAAAGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR CCA 72 bp | GGTAGGAGTAAGCCAACAGAAGACACAGAATTGAGATaGGGAGAGAATTGGGTCACAAGGTATGGGAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: GRSKPTEDTELR*GENWVTRYGKP Trigger: TGGTTTCCCATACCTTGTGACCCAATTCTCTCCCCATCTCAATTCTGTGTCTTCTGTTGGCTTACTCCTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR CCA 72 bp | TCCTCGTGCTTTGGCTGCCAAGGCACTGGCACTGCTTaGAAAGCTAAGAAACTGCATCTAATTGCTTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SSCFGCQGTGTA*KAKKLHLIASF Trigger: AAAAGAAGCAATTAGATGCAGTTTCTTAGCTTTCCAAGCAGTGCCAGTGCCTTGGCAGCCAAAGCACGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTGAGGCTGTTATGGCACTTACTGATGGCACTTTGGGGATTCATGGAATTGAGGCTTCTGAGGCATTCTaGAGAAATGCCTTTGTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: AEAVMALTDGTLGIHGIEASEAF*RNAFVF Trigger: GAAAACAAAGGCATTTCTCAAGAATGCCTCAGAAGC...CTCAATTCCATGAATCCCCAAAGTGCCATCAGTAAGTGCCATAACAGCCTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR CCA 72 bp | TGTGTTCTATGCATGGCCACAATTAAGAACAGGCTGTaGACACCCGATGAGGCCAGAAGACAAAGAAGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: CVLCMATIKNRL*TPDEARRQRSK Trigger: TTTACTTCTTTGTCTTCTGGCCTCATCGGGTGTCCACAGCCTGTTCTTAATTGTGGCCATGCATAGAACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR GCA 72 bp | TATGGATCCAGTTTTCACATTTCCAGGCCTAACCTTTaGTCTTTGGCAGTCTTTAAACTTGACCTGACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: YGSSFHISRPNL*SLAVFKLDLTD Trigger: GTCTGTCAGGTCAAGTTTAAAGACTGCCAAAGAGCAAAGGTTAGGCCTGGAAATGTGAAAACTGGATCCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| 3UTR GCA 72 bp | TTTGAAGTAAAATCTGGATGCATTCTGAATGCCCCCTaGTCAGGTTTGACATGCTATCTTAAAGGAGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: FEVKSGCILNAP*SGLTCYLKGAA Trigger: TGCTGCTCCTTTAAGATAGCATGTCAAACCTGAGCAGGGGGCATTCAGAATGCATCCAGATTTTACTTCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR CCA 72 bp | GTGTTCATTTTATACTTAAGCTCTGTGTTCTATGCATaGCCACAATTAAGAACAGGCTGTGGACACCCGATG | + |
|
Preference number: 3 (lower is better) Translates to: VFILYLSSVFYA*PQLRTGCGHPM Trigger: CATCGGGTGTCCACAGCCTGTTCTTAATTGTGGCCATGCATAGAACACAGAGCTTAAGTATAAAATGAACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR GCA 72 bp | TACGTGTTAATAGCAGTTACAAAACAGAGTTGGATGTaGGTAATCCCAGCAGGAGGATTGCAAGTTCAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: YVLIAVTKQSWM*VIPAGGLQVQN Trigger: GTTTTGAACTTGCAATCCTCCTGCTGGGATTACGCACATCCAACTCTGTTTTGTAACTGCTATTAACACGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGTTTGAGATGTGTATGCAAAAAGCAAACTATTGTGTGTCCTGCTCAAACAAGAGTTACAAAACAGAGTaGGATGTGCGTAATCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: MFEMCMQKANYCVSCSNKSYKTE*DVRNPS Trigger: GCTGGGATTACGCACATCCAACTCTGTTTTGTAACT...CTTGTTTGAGCAGGACACACAATAGTTTGCTTTTTGCATACACATCTCAAACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR CAA 72 bp | GAGTGCTCACAGGAGCCCATAGGCCTTCCCTTGCTGTaGCAGGGATCCTCGTGCTTTGGCTGCCAAGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: ECSQEPIGLPLL*QGSSCFGCQGT Trigger: AGTGCCTTGGCAGCCAAAGCACGAGGATCCCTGCAACAGCAAGGGAAGGCCTATGGGCTCCTGTGAGCACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| CDS-3UTR GCA 90 bp | CAGCACAGCATGGCAGAGTGTGGCTCAGCAGAACCCATTCCATCCAGGCTTCCTCACTCCTCCGATGAGTaGACCTGCCACAGGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QHSMAECGSAEPIPSRLPHSSDE*TCHRQS Trigger: GCTCTGCCTGTGGCAGGTGCACTCATCGGAGGAGTG...AGGAAGCCTGGATGGAATGGGTTCTGCTGAGCCACACTCTGCCATGCTGTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| CDS-3UTR CCA 90 bp | GCAACAGTAGCATTCTTCTCTAGGATGGTAAGGTGTGGCTTGCCCAGGAGGGTCCTGCGAGGAGGCCGATaGGACCCCCTACCACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ATVAFFSRMVRCGLPRRVLRGGR*DPLPLL Trigger: GAGGAGTGGTAGGGGGTCCCATCGGCCTCCTCGCAG...GACCCTCCTGGGCAAGCCACACCTTACCATCCTAGAGAAGAATGCTACTGTTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| CDS-3UTR TCA 90 bp | CGGGTAAACCCCAGTCCGTGCTCCAGAGGTCTGGCGAGTTCTAGGCAGCTTCAGTCAATCTTCTCCTGCTaGGAACTCACTAGGAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RVNPSPCSRGLASSRQLQSIFSC*ELTRRD Trigger: GTCCCTCCTAGTGAGTTCTCAGCAGGAGAAGATTGA...CTGAAGCTGCCTAGAACTCGCCAGACCTCTGGAGCACGGACTGGGGTTTACCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTGGCAGTCTTTAAACTTGACCTGACAGACACCCTCTGGCCAGGCTCCTCCCTACCACTCCTCCGATaGGTGCACCTGCCACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLAVFKLDLTDTLWPGSSLPLLR*VHLPQA Trigger: TGCCTGTGGCAGGTGCACTCATCGGAGGAGTGGTAG...GGAGGAGCCTGGCCAGAGGGTGTCTGTCAGGTCAAGTTTAAAGACTGCCAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR GCA 90 bp | CATGGTGGTTCAACACTGCATGGACAGGGAGAGCCACTTCCTAACACTTCCAGCTGCCACTTTGAAGCCTaGGAGGAGGCCGATGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: HGGSTLHGQGEPLPNTSSCHFEA*EEADGT Trigger: GGTCCCATCGGCCTCCTCGCAGGCTTCAAAGTGGCA...GCTGGAAGTGTTAGGAAGTGGCTCTCCCTGTCCATGCAGTGTTGAACCACCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR CCA 90 bp | TCACTCTGCAGAAGACATGAACACGGAAGGTGGACAGGCAGGACAGCTGTGGCTAGTTCAAGGCCAGCCTaGTCCTGTGCTCTGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLCRRHEHGRWTGRTAVASSRPA*SCALAA Trigger: AGCAGCCAGAGCACAGGACCAGGCTGGCCTTGAACT...AGCCACAGCTGTCCTGCCTGTCCACCTTCCGTGTTCATGTCTTCTGCAGAGTGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107721.8 |
||
| CDS-3UTR TCA 90 bp | TCCACTCATGGTGGTTCAACACTGCATGGACAGGGAGAGCCACTTCCTAACACTCTACCACTCCTCCGATaGGTGCACCTGCCACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: STHGGSTLHGQGEPLPNTLPLLR*VHLPQA Trigger: TGCCTGTGGCAGGTGCACTCATCGGAGGAGTGGTAG...AGTGTTAGGAAGTGGCTCTCCCTGTCCATGCAGTGTTGAACCACCATGAGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR TCA 90 bp | GGTGGTTCAACACTGCATGGACAGGGAGAGCCACTTCCTAACACTTCCAGCAACCAATTCCTGCCACTTTaGAGCCTGCGAGGAGGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GGSTLHGQGEPLPNTSSNQFLPL*SLRGGR Trigger: TCGGCCTCCTCGCAGGCTTCAAAGTGGCAGGAATTG...GTTGCTGGAAGTGTTAGGAAGTGGCTCTCCCTGTCCATGCAGTGTTGAACCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR GCA 90 bp | TCACTCTGCAGAAGACATGAACACGGAAGGTGGACAGGCAGGACAGCTGTGGCTCGCCCTGCGTTGATGTaGTCTTCGTGCAACTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLCRRHEHGRWTGRTAVARPALM*SSCNLS Trigger: GGACAAGTTGCACGAAGAGCACATCAACGCAGGGCG...AGCCACAGCTGTCCTGCCTGTCCACCTTCCGTGTTCATGTCTTCTGCAGAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| CDS-3UTR GCA 90 bp | GCAACAGTAGCATTCTTCTCTAGGATGGTAAGGTGTGGCTTGCCCAGGAGGGTCGAGCTGGAGGAACTCTaGCGTAGCTGTTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ATVAFFSRMVRCGLPRRVELEEL*RSCCCC Trigger: GCAGCAGCAACAGCTACGGCAGAGTTCCTCCAGCTC...GACCCTCCTGGGCAAGCCACACCTTACCATCCTAGAGAAGAATGCTACTGTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| CDS-3UTR GCA 90 bp | CATGGACAGGGAGAGCCACTTCCTAACACTTCCAGCAACAGCAACTGCTCCTTATGCCACTTTGAAGCCTaGGAGGAGGCCGATGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: HGQGEPLPNTSSNSNCSLCHFEA*EEADGT Trigger: GGTCCCATCGGCCTCCTCGCAGGCTTCAAAGTGGCA...TAAGGAGCAGTTGCTGTTGCTGGAAGTGTTAGGAAGTGGCTCTCCCTGTCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR GCA 90 bp | GTAGCATTCTTCTCTAGGATGGTAAGGTGTGGCTTGCCCAGGAGGGTCTTGCTCCACCCCACCACCAAGTaGAGCTGCAATTCCTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VAFFSRMVRCGLPRRVLLHPTTK*SCNSCH Trigger: GTGGCAGGAATTGCAGCTGCACTTGGTGGTGGGGTG...GAGCAAGACCCTCCTGGGCAAGCCACACCTTACCATCCTAGAGAAGAATGCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| CDS-3UTR CCA 90 bp | GTGTGGCTTGCCCAGGAGGGTCTTGCTCCAGGCTTTCACTCCTCTCTCCAGAGGCCTCTCCAGGTCTGTTaGGATCACGATCTTAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VWLAQEGLAPGFHSSLQRPLQVC*DHDLSE Trigger: TTCACTAAGATCGTGATCCCAACAGACCTGGAGAGG...CCTCTGGAGAGAGGAGTGAAAGCCTGGAGCAAGACCCTCCTGGGCAAGCCACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| 3UTR CAA 72 bp | AAACAAGAGTGCTCACAGGAGCCCATAGGCCTTCCCTaGCTGTTGCAGGGATCCTCGTGCTTTGGCTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KQECSQEPIGLP*LLQGSSCFGCQ Trigger: TTGGCAGCCAAAGCACGAGGATCCCTGCAACAGCAAGGGAAGGCCTATGGGCTCCTGTGAGCACTCTTGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| CDS-3UTR TCA 90 bp | CGGGTAAACCCCAGTCCGTGCTCCAGAGGTCTGGCGAGTTCTAGGCAGCTTCAGCTGGTCAGAGAAGGCTaGAGTAATTCTTCATCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RVNPSPCSRGLASSRQLQLVREG*SNSSSL Trigger: CAACGATGAAGAATTACTTCAGCCTTCTCTGACCAG...CTGAAGCTGCCTAGAACTCGCCAGACCTCTGGAGCACGGACTGGGGTTTACCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| CDS-3UTR TCA 90 bp | CCTAACACTTCCAGCAACAGCAACTGCTCCTTAGCTCGGTGCACAGCAGCAGCTTCACAGCGGCACTGTTaGCATGGTCTGCAATGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PNTSSNSNCSLARCTAAASQRHC*HGLQCC Trigger: ACAGCATTGCAGACCATGTCAACAGTGCCGCTGTGA...AGCTGCTGCTGTGCACCGAGCTAAGGAGCAGTTGCTGTTGCTGGAAGTGTTAGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR TCA 90 bp | GTGGTTCAACACTGCATGGACAGGGAGAGCCACTTCCTAACACTTCCAGCAACACAATTCCTGCCACTTTaGAGCCTGCGAGGAGGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: VVQHCMDRESHFLTLPATQFLPL*SLRGGR Trigger: TCGGCCTCCTCGCAGGCTTCAAAGTGGCAGGAATTG...TGTTGCTGGAAGTGTTAGGAAGTGGCTCTCCCTGTCCATGCAGTGTTGAACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR GCA 90 bp | AACACATCCACTCATGGTGGTTCAACACTGCATGGACAGGGAGAGCCACTTCCTGAGCTGGAGGAACTCTaGCGTAGCTGTTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NTSTHGGSTLHGQGEPLPELEEL*RSCCCC Trigger: GCAGCAGCAACAGCTACGGCAGAGTTCCTCCAGCTC...AGGAAGTGGCTCTCCCTGTCCATGCAGTGTTGAACCACCATGAGTGGATGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR GCA 90 bp | TCAACACTGCATGGACAGGGAGAGCCACTTCCTAACACTTCCAGCAACAGCAACGAGCTGGAGGAACTCTaGCGTAGCTGTTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: STLHGQGEPLPNTSSNSNELEEL*RSCCCC Trigger: GCAGCAGCAACAGCTACGGCAGAGTTCCTCCAGCTC...GTTGCTGTTGCTGGAAGTGTTAGGAAGTGGCTCTCCCTGTCCATGCAGTGTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR GCA 90 bp | GCTAACAAACACATCCACTCATGGTGGTTCAACACTGCATGGACAGGGAGAGCCCACCCCACCACCAAGTaGAGCTGCAATTCCTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ANKHIHSWWFNTAWTGRAHPTTK*SCNSCH Trigger: GTGGCAGGAATTGCAGCTGCACTTGGTGGTGGGGTG...GGCTCTCCCTGTCCATGCAGTGTTGAACCACCATGAGTGGATGTGTTTGTTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR CCA 90 bp | AGGTGTGGCTTGCCCAGGAGGGTCTTGCTCCAGGCTTTCACTCCTCTCTCCAGACCTCTCCAGGTCTGTTaGGATCACGATCTTAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RCGLPRRVLLQAFTPLSRPLQVC*DHDLSE Trigger: TTCACTAAGATCGTGATCCCAACAGACCTGGAGAGG...TCTGGAGAGAGGAGTGAAAGCCTGGAGCAAGACCCTCCTGGGCAAGCCACACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| CDS-3UTR TCA 90 bp | CATGGTGGTTCAACACTGCATGGACAGGGAGAGCCACTTCCTAACACTTCCAGCTCACAGCGGCACTGTTaGCATGGTCTGCAATGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HGGSTLHGQGEPLPNTSSSQRHC*HGLQCC Trigger: ACAGCATTGCAGACCATGTCAACAGTGCCGCTGTGA...GCTGGAAGTGTTAGGAAGTGGCTCTCCCTGTCCATGCAGTGTTGAACCACCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR GCA 90 bp | TCCACTCATGGTGGTTCAACACTGCATGGACAGGGAGAGCCACTTCCTAACACTCGCCCTGCGTTGATGTaGTCTTCGTGCAACTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: STHGGSTLHGQGEPLPNTRPALM*SSCNLS Trigger: GGACAAGTTGCACGAAGAGCACATCAACGCAGGGCG...AGTGTTAGGAAGTGGCTCTCCCTGTCCATGCAGTGTTGAACCACCATGAGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR GCA 90 bp | CTCATGGTGGTTCAACACTGCATGGACAGGGAGAGCCACTTCCTAACACTTCCACTCTGCCGTAGCTGTTaGTGCTGCTTCCTTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LMVVQHCMDRESHFLTLPLCRSC*CCFLDR Trigger: CCTGTCAAGGAAGCAGCAGCAACAGCTACGGCAGAG...TGGAAGTGTTAGGAAGTGGCTCTCCCTGTCCATGCAGTGTTGAACCACCATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR GCA 90 bp | GACACCCTCTGGCCAGGCTCCTCCACCTCTAAAATCTCCATTAACACCCAGCTATGCCACAGGCAGAGCTaGCAGCTTGTATTTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DTLWPGSSTSKISINTQLCHRQS*QLVFCS Trigger: GCTGCAAAATACAAGCTGGCAGCTCTGCCTGTGGCA...TAGCTGGGTGTTAATGGAGATTTTAGAGGTGGAGGAGCCTGGCCAGAGGGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR GCA 90 bp | GACACCCTCTGGCCAGGCTCCTCCACCTCTAAAATCTCCATTAACACCCAGCTATGCAGCTGCAATTCCTaGCACTTTGAAGCCTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: DTLWPGSSTSKISINTQLCSCNS*HFEACE Trigger: CTCGCAGGCTTCAAAGTGGCAGGAATTGCAGCTGCA...TAGCTGGGTGTTAATGGAGATTTTAGAGGTGGAGGAGCCTGGCCAGAGGGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR GCA 90 bp | GCAACAGTAGCATTCTTCTCTAGGATGGTAAGGTGTGGCTTGCCCAGGAGGGTCTGCAGCTGCAATTCCTaGCACTTTGAAGCCTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ATVAFFSRMVRCGLPRRVCSCNS*HFEACE Trigger: CTCGCAGGCTTCAAAGTGGCAGGAATTGCAGCTGCA...GACCCTCCTGGGCAAGCCACACCTTACCATCCTAGAGAAGAATGCTACTGTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| CDS-3UTR CCA 90 bp | CCTAACACTTCCAGCAACAGCAACTGCTCCTTAGCTCGGTGCACAGCAGCAGCTGCGGCACTGTTGACATaGTCTGCAATGCTGTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: PNTSSNSNCSLARCTAAAAALLT*SAMLSI Trigger: GATTGACAGCATTGCAGACCATGTCAACAGTGCCGC...AGCTGCTGCTGTGCACCGAGCTAAGGAGCAGTTGCTGTTGCTGGAAGTGTTAGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR CCA 90 bp | TCACTCTGCAGAAGACATGAACACGGAAGGTGGACAGGCAGGACAGCTGTGGCTGCGGCACTGTTGACATaGTCTGCAATGCTGTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: SLCRRHEHGRWTGRTAVAAALLT*SAMLSI Trigger: GATTGACAGCATTGCAGACCATGTCAACAGTGCCGC...AGCCACAGCTGTCCTGCCTGTCCACCTTCCGTGTTCATGTCTTCTGCAGAGTGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| CDS-3UTR CCA 90 bp | ATCTCCATTAACACCCAGCTAACAAACACATCCACTCATGGTGGTTCAACACTGCTGCGAGGAGGCCGATaGGACCCCCTACCACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ISINTQLTNTSTHGGSTLLRGGR*DPLPLL Trigger: GAGGAGTGGTAGGGGGTCCCATCGGCCTCCTCGCAG...CAGTGTTGAACCACCATGAGTGGATGTGTTTGTTAGCTGGGTGTTAATGGAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| 3UTR CAA 72 bp | ACAGTAGCATTCTTCTCTAGGATGGTAAGGTGTGGCTaGCCCAGGAGGGTCTTGCTCCAGGCTTTCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TVAFFSRMVRCG*PRRVLLQAFTP Trigger: AGGAGTGAAAGCCTGGAGCAAGACCCTCCTGGGCAAGCCACACCTTACCATCCTAGAGAAGAATGCTACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| CDS-3UTR TCA 90 bp | GACCTGACAGACACCCTCTGGCCAGGCTCCTCCACCTCTAAAATCTCCATTAACTCAATCTTCTCCTGCTaGGAACTCACTAGGAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: DLTDTLWPGSSTSKISINSIFSC*ELTRRD Trigger: GTCCCTCCTAGTGAGTTCTCAGCAGGAGAAGATTGA...GTTAATGGAGATTTTAGAGGTGGAGGAGCCTGGCCAGAGGGTGTCTGTCAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR GCA 90 bp | CATGGACAGGGAGAGCCACTTCCTAACACTTCCAGCAACAGCAACTGCTCCTTATGCCACAGGCAGAGCTaGCAGCTTGTATTTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HGQGEPLPNTSSNSNCSLCHRQS*QLVFCS Trigger: GCTGCAAAATACAAGCTGGCAGCTCTGCCTGTGGCA...TAAGGAGCAGTTGCTGTTGCTGGAAGTGTTAGGAAGTGGCTCTCCCTGTCCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR CCA 90 bp | TCTTTGGCAGTCTTTAAACTTGACCTGACAGACACCCTCTGGCCAGGCTCCTCCCCATTTCTCGGATATTaGAGCGCAGTTGCTGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: SLAVFKLDLTDTLWPGSSPFLGY*SAVAEP Trigger: CGGTTCAGCAACTGCGCTCCAATATCCGAGAAATGG...GGAGGAGCCTGGCCAGAGGGTGTCTGTCAGGTCAAGTTTAAAGACTGCCAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR CCA 90 bp | GACCTGACAGACACCCTCTGGCCAGGCTCCTCCACCTCTAAAATCTCCATTAACTTGGCTAGGGAGATCTaGACAGCTGGAAGTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DLTDTLWPGSSTSKISINLAREI*TAGSEL Trigger: AAGCTCACTTCCAGCTGTCCAGATCTCCCTAGCCAA...GTTAATGGAGATTTTAGAGGTGGAGGAGCCTGGCCAGAGGGTGTCTGTCAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR TCA 90 bp | GCAACAGTAGCATTCTTCTCTAGGATGGTAAGGTGTGGCTTGCCCAGGAGGGTCGCAGCATTTTGGTCTTaGGGAATTTCAGGCAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ATVAFFSRMVRCGLPRRVAAFWS*GISGKA Trigger: TGCCTTGCCTGAAATTCCTCAAGACCAAAATGCTGC...GACCCTCCTGGGCAAGCCACACCTTACCATCCTAGAGAAGAATGCTACTGTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| CDS-3UTR TCA 90 bp | ACATGCCTGCTGTGCATGCCAACTGTTGGGTTAGCACCACAGATCTTTCCTTGGTCAATCTTCTCCTGCTaGGAACTCACTAGGAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TCLLCMPTVGLAPQIFPWSIFSC*ELTRRD Trigger: GTCCCTCCTAGTGAGTTCTCAGCAGGAGAAGATTGA...CCAAGGAAAGATCTGTGGTGCTAACCCAACAGTTGGCATGCACAGCAGGCATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| CDS-3UTR GCA 90 bp | AACCTTTGCTCTTTGGCAGTCTTTAAACTTGACCTGACAGACACCCTCTGGCCACTCTGCCGTAGCTGTTaGTGCTGCTTCCTTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: NLCSLAVFKLDLTDTLWPLCRSC*CCFLDR Trigger: CCTGTCAAGGAAGCAGCAGCAACAGCTACGGCAGAG...TGGCCAGAGGGTGTCTGTCAGGTCAAGTTTAAAGACTGCCAAAGAGCAAAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR GCA 90 bp | AGGTGTGGCTTGCCCAGGAGGGTCTTGCTCCAGGCTTTCACTCCTCTCTCCAGATATTTTGCAGCCTTCTaGAAGTTTTTGGTTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RCGLPRRVLLQAFTPLSRYFAAF*KFLVPS Trigger: AGAGGGAACCAAAAACTTGCAGAAGGCTGCAAAATA...TCTGGAGAGAGGAGTGAAAGCCTGGAGCAAGACCCTCCTGGGCAAGCCACACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| CDS-3UTR GCA 90 bp | GCAACTTTGGGGATGTCACCAGACATGTGTAAACACCTGGGAGCAACAGTAGCAGGAAGAGATGAGAGTTaGGGGACCAGTGGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ATLGMSPDMCKHLGATVAGRDES*GTSGFF Trigger: GAAGAAGCCACTGGTCCCGCAACTCTCATCTCTTCC...TGCTACTGTTGCTCCCAGGTGTTTACACATGTCTGGTGACATCCCCAAAGTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107721.8 |
||
| CDS-3UTR GCA 90 bp | ATACGTGTTAATAGCAGTTACAAAACAGAGTTGGATGTGCGTAATCCCAGCAGGGCCAGCCTGGTCCTGTaGTCTGGCTGCTGGTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: IRVNSSYKTELDVRNPSRASLVL*SGCWCT Trigger: AGTGCACCAGCAGCCAGAGCACAGGACCAGGCTGGC...CCTGCTGGGATTACGCACATCCAACTCTGTTTTGTAACTGCTATTAACACGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107721.8 |
||
| CDS-3UTR CCA 90 bp | CATGGTGGTTCAACACTGCATGGACAGGGAGAGCCACTTCCTAACACTTCCAGCCCTCTCCAGGTCTGTTaGGATCACGATCTTAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HGGSTLHGQGEPLPNTSSPLQVC*DHDLSE Trigger: TTCACTAAGATCGTGATCCCAACAGACCTGGAGAGG...GCTGGAAGTGTTAGGAAGTGGCTCTCCCTGTCCATGCAGTGTTGAACCACCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR CCA 90 bp | TCCACTCATGGTGGTTCAACACTGCATGGACAGGGAGAGCCACTTCCTAACACTTTGGCTAGGGAGATCTaGACAGCTGGAAGTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: STHGGSTLHGQGEPLPNTLAREI*TAGSEL Trigger: AAGCTCACTTCCAGCTGTCCAGATCTCCCTAGCCAA...AGTGTTAGGAAGTGGCTCTCCCTGTCCATGCAGTGTTGAACCACCATGAGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR TCA 90 bp | TCAACACTGCATGGACAGGGAGAGCCACTTCCTAACACTTCCAGCAACAGCAACTTGCTGCTGCTTCCTTaGCAGGATCTATCATTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: STLHGQGEPLPNTSSNSNLLLLP*QDLSFA Trigger: AGCGAATGATAGATCCTGTCAAGGAAGCAGCAGCAA...GTTGCTGTTGCTGGAAGTGTTAGGAAGTGGCTCTCCCTGTCCATGCAGTGTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR TCA 90 bp | TCAACACTGCATGGACAGGGAGAGCCACTTCCTAACACTTCCAGCAACAGCAACGCAGCATTTTGGTCTTaGGGAATTTCAGGCAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: STLHGQGEPLPNTSSNSNAAFWS*GISGKA Trigger: TGCCTTGCCTGAAATTCCTCAAGACCAAAATGCTGC...GTTGCTGTTGCTGGAAGTGTTAGGAAGTGGCTCTCCCTGTCCATGCAGTGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR TCA 90 bp | CTCATGGTGGTTCAACACTGCATGGACAGGGAGAGCCACTTCCTAACACTTCCACTGGACAGCTGGAAGTaGGCTTCTCCATCATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LMVVQHCMDRESHFLTLPLDSWK*ASPSFS Trigger: AGAAAATGATGGAGAAGCTCACTTCCAGCTGTCCAG...TGGAAGTGTTAGGAAGTGGCTCTCCCTGTCCATGCAGTGTTGAACCACCATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR TCA 90 bp | GTGGTTCAACACTGCATGGACAGGGAGAGCCACTTCCTAACACTTCCAGCAACACTGGACAGCTGGAAGTaGGCTTCTCCATCATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VVQHCMDRESHFLTLPATLDSWK*ASPSFS Trigger: AGAAAATGATGGAGAAGCTCACTTCCAGCTGTCCAG...TGTTGCTGGAAGTGTTAGGAAGTGGCTCTCCCTGTCCATGCAGTGTTGAACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR TCA 90 bp | GCTAACAAACACATCCACTCATGGTGGTTCAACACTGCATGGACAGGGAGAGCCCTGGTCAGAGAAGGCTaGAGTAATTCTTCATCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ANKHIHSWWFNTAWTGRALVREG*SNSSSL Trigger: CAACGATGAAGAATTACTTCAGCCTTCTCTGACCAG...GGCTCTCCCTGTCCATGCAGTGTTGAACCACCATGAGTGGATGTGTTTGTTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR TCA 90 bp | TCACTCTGCAGAAGACATGAACACGGAAGGTGGACAGGCAGGACAGCTGTGGCTCCTATTCCTTTCTTCTaGATCTCAAACCTTTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLCRRHEHGRWTGRTAVAPIPFF*ISNLSD Trigger: GTCAGAAAGGTTTGAGATTCAGAAGAAAGGAATAGG...AGCCACAGCTGTCCTGCCTGTCCACCTTCCGTGTTCATGTCTTCTGCAGAGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107721.8 |
||
| CDS-3UTR GCA 90 bp | AGATCCTTAGTTATGGATCCAGTTTTCACATTTCCAGGCCTAACCTTTGCTCTTCACTCCTCCGATGAGTaGACCTGCCACAGGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSLVMDPVFTFPGLTFALHSSDE*TCHRQS Trigger: GCTCTGCCTGTGGCAGGTGCACTCATCGGAGGAGTG...AAGAGCAAAGGTTAGGCCTGGAAATGTGAAAACTGGATCCATAACTAAGGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR CCA 90 bp | GCAACTTTGGGGATGTCACCAGACATGTGTAAACACCTGGGAGCAACAGTAGCACCATTTCTCGGATATTaGAGCGCAGTTGCTTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: ATLGMSPDMCKHLGATVAPFLGY*SAVASR Trigger: TCGAGAAGCAACTGCGCTCCAATATCCGAGAAATGG...TGCTACTGTTGCTCCCAGGTGTTTACACATGTCTGGTGACATCCCCAAAGTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107721.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAACAACACAACTCCACATACAAAAAGAATCTGAAGCCAGAGGGGAAGCACCTGTGCTCTGGCTGCTaGTGCACTCTTCTCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QKQHNSTYKKNLKPEGKHLCSGC*CTLLRK Trigger: CTTCCTGAGAAGAGTGCACCAGCAGCCAGAGCACAG...GTGCTTCCCCTCTGGCTTCAGATTCTTTTTGTATGTGGAGTTGTGTTGTTTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107721.8 |
||
| CDS-3UTR TCA 90 bp | AATAGCAGTTACAAAACAGAGTTGGATGTGCGTAATCCCAGCAGGAGGATTGCATCACAGCGGCACTGTTaGCATGGTCTGCAATGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NSSYKTELDVRNPSRRIASQRHC*HGLQCC Trigger: ACAGCATTGCAGACCATGTCAACAGTGCCGCTGTGA...TGCAATCCTCCTGCTGGGATTACGCACATCCAACTCTGTTTTGTAACTGCTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| CDS-3UTR GCA 90 bp | TCAACACTGCATGGACAGGGAGAGCCACTTCCTAACACTTCCAGCAACAGCAACACTGTTGACATGGTCTaGAATGCTGTCAATCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: STLHGQGEPLPNTSSNSNTVDMV*NAVNLL Trigger: GAGAAGATTGACAGCATTGCAGACCATGTCAACAGT...GTTGCTGTTGCTGGAAGTGTTAGGAAGTGGCTCTCCCTGTCCATGCAGTGTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR CCA 90 bp | CGTGTTAATAGCAGTTACAAAACAGAGTTGGATGTGCGTAATCCCAGCAGGAGGCCATTTCTCGGATATTaGAGCGCAGTTGCTGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: RVNSSYKTELDVRNPSRRPFLGY*SAVAEP Trigger: CGGTTCAGCAACTGCGCTCCAATATCCGAGAAATGG...CCTCCTGCTGGGATTACGCACATCCAACTCTGTTTTGTAACTGCTATTAACACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| CDS-3UTR CCA 90 bp | CGTGTTAATAGCAGTTACAAAACAGAGTTGGATGTGCGTAATCCCAGCAGGAGGGAGTTGCGGGACCAGTaGCTTCTTCCTATTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RVNSSYKTELDVRNPSRRELRDQ*LLPIPF Trigger: GAAAGGAATAGGAAGAAGCCACTGGTCCCGCAACTC...CCTCCTGCTGGGATTACGCACATCCAACTCTGTTTTGTAACTGCTATTAACACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107721.8 |
||
| CDS-3UTR TCA 90 bp | CGTGTTAATAGCAGTTACAAAACAGAGTTGGATGTGCGTAATCCCAGCAGGAGGTTGCTGCTGCTTCCTTaGCAGGATCTATCATTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RVNSSYKTELDVRNPSRRLLLLP*QDLSFA Trigger: AGCGAATGATAGATCCTGTCAAGGAAGCAGCAGCAA...CCTCCTGCTGGGATTACGCACATCCAACTCTGTTTTGTAACTGCTATTAACACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| CDS-3UTR TCA 90 bp | CAGAAACAACACAACTCCACATACAAAAAGAATCTGAAGCCAGAGGGGAAGCACTCAATTTTCCACCTGTaGAGCCTAACACCCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: QKQHNSTYKKNLKPEGKHSIFHL*SLTPHH Trigger: GTGGTGGGGTGTTAGGCTTCACAGGTGGAAAATTGA...GTGCTTCCCCTCTGGCTTCAGATTCTTTTTGTATGTGGAGTTGTGTTGTTTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| CDS-3UTR GCA 90 bp | AAACAGAAACAACACAACTCCACATACAAAAAGAATCTGAAGCCAGAGGGGAAGCTCTGCCGTAGCTGTTaGTGCTGCTTCCTTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KQKQHNSTYKKNLKPEGKLCRSC*CCFLDR Trigger: CCTGTCAAGGAAGCAGCAGCAACAGCTACGGCAGAG...CTTCCCCTCTGGCTTCAGATTCTTTTTGTATGTGGAGTTGTGTTGTTTCTGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| CDS-3UTR GCA 90 bp | CTCATGGTGGTTCAACACTGCATGGACAGGGAGAGCCACTTCCTAACACTTCCATATTTTGCAGCCTTCTaGAAGTTTTTGGTTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LMVVQHCMDRESHFLTLPYFAAF*KFLVPS Trigger: AGAGGGAACCAAAAACTTGCAGAAGGCTGCAAAATA...TGGAAGTGTTAGGAAGTGGCTCTCCCTGTCCATGCAGTGTTGAACCACCATGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR CCA 90 bp | CATGGACAGGGAGAGCCACTTCCTAACACTTCCAGCAACAGCAACTGCTCCTTATTCTCGATGTTTATCTaGTGTTTTCTTAGCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HGQGEPLPNTSSNSNCSLFSMFI*CFLSLS Trigger: GGAGAGGCTAAGAAAACACCAGATAAACATCGAGAA...TAAGGAGCAGTTGCTGTTGCTGGAAGTGTTAGGAAGTGGCTCTCCCTGTCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR CCA 90 bp | ATCTCCATTAACACCCAGCTAACAAACACATCCACTCATGGTGGTTCAACACTGGCGGCACTGTTGACATaGTCTGCAATGCTGTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: ISINTQLTNTSTHGGSTLAALLT*SAMLSI Trigger: GATTGACAGCATTGCAGACCATGTCAACAGTGCCGC...CAGTGTTGAACCACCATGAGTGGATGTGTTTGTTAGCTGGGTGTTAATGGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR GCA 90 bp | AAACAGAAACAACACAACTCCACATACAAAAAGAATCTGAAGCCAGAGGGGAAGTGCCACAGGCAGAGCTaGCAGCTTGTATTTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KQKQHNSTYKKNLKPEGKCHRQS*QLVFCS Trigger: GCTGCAAAATACAAGCTGGCAGCTCTGCCTGTGGCA...CTTCCCCTCTGGCTTCAGATTCTTTTTGTATGTGGAGTTGTGTTGTTTCTGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| 3UTR CAA 72 bp | AATCTCAAACCTTTCTGTTTTGAGAGAGACACGGAGTaGAAGTGGACATGCCTGCTGTGCATGCCAACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NLKPFCFERDTE*KWTCLLCMPTV Trigger: AACAGTTGGCATGCACAGCAGGCATGTCCACTTCAACTCCGTGTCTCTCTCAAAACAGAAAGGTTTGAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR CAA 72 bp | AAATCTGGATGCATTCTGAATGCCCCCTGCTCAGGTTaGACATGCTATCTTAAAGGAGCAGCAAGAACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSGCILNAPCSG*TCYLKGAARTR Trigger: TCTGGTTCTTGCTGCTCCTTTAAGATAGCATGTCAAACCTGAGCAGGGGGCATTCAGAATGCATCCAGATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| CDS-3UTR TCA 90 bp | AGATCCTTAGTTATGGATCCAGTTTTCACATTTCCAGGCCTAACCTTTGCTCTTTCAATTTTCCACCTGTaGAGCCTAACACCCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: RSLVMDPVFTFPGLTFALSIFHL*SLTPHH Trigger: GTGGTGGGGTGTTAGGCTTCACAGGTGGAAAATTGA...AAGAGCAAAGGTTAGGCCTGGAAATGTGAAAACTGGATCCATAACTAAGGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| 3UTR CAA 72 bp | ATAGACAGTTATCTGAATCACCAGCTGGAAATGGGCTaGGTGGCTGGTTTAGTAGGTCTAGCATTGAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IDSYLNHQLEMG*VAGLVGLALRF Trigger: AAACCTCAATGCTAGACCTACTAAACCAGCCACCAAGCCCATTTCCAGCTGGTGATTCAGATAACTGTCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| CDS-3UTR GCA 90 bp | GGTTTGACATGCTATCTTAAAGGAGCAGCAAGAACCAGAGAACAAAGGATGACAACTGTTGACATGGTCTaGAATGCTGTCAATCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLTCYLKGAARTREQRMTTVDMV*NAVNLL Trigger: GAGAAGATTGACAGCATTGCAGACCATGTCAACAGT...TGTCATCCTTTGTTCTCTGGTTCTTGCTGCTCCTTTAAGATAGCATGTCAAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| 3UTR CAA 72 bp | TTAGGAATACGTGTTAATAGCAGTTACAAAACAGAGTaGGATGTGCGTAATCCCAGCAGGAGGATTGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGIRVNSSYKTE*DVRNPSRRIAS Trigger: ACTTGCAATCCTCCTGCTGGGATTACGCACATCCAACTCTGTTTTGTAACTGCTATTAACACGTATTCCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| CDS-3UTR TCA 90 bp | TACTGTGTGCTAGAGATTTGTAGTTGTGTTTCCAAACTTCTTGTTATCAGTAGGGCAGCATTTTGGTCTTaGGGAATTTCAGGCAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: YCVLEICSCVSKLLVISRAAFWS*GISGKA Trigger: TGCCTTGCCTGAAATTCCTCAAGACCAAAATGCTGC...CCTACTGATAACAAGAAGTTTGGAAACACAACTACAAATCTCTAGCACACAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| CDS-3UTR GCA 90 bp | AAACAGAAACAACACAACTCCACATACAAAAAGAATCTGAAGCCAGAGGGGAAGACTGTTGACATGGTCTaGAATGCTGTCAATCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KQKQHNSTYKKNLKPEGKTVDMV*NAVNLL Trigger: GAGAAGATTGACAGCATTGCAGACCATGTCAACAGT...CTTCCCCTCTGGCTTCAGATTCTTTTTGTATGTGGAGTTGTGTTGTTTCTGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| CDS-3UTR TCA 90 bp | TACTGTGTGCTAGAGATTTGTAGTTGTGTTTCCAAACTTCTTGTTATCAGTAGGCTGGTCAGAGAAGGCTaGAGTAATTCTTCATCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: YCVLEICSCVSKLLVISRLVREG*SNSSSL Trigger: CAACGATGAAGAATTACTTCAGCCTTCTCTGACCAG...CCTACTGATAACAAGAAGTTTGGAAACACAACTACAAATCTCTAGCACACAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| CDS-3UTR GCA 90 bp | GAATACGTGTTAATAGCAGTTACAAAACAGAGTTGGATGTGCGTAATCCCAGCATATTTTGCAGCCTTCTaGAAGTTTTTGGTTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EYVLIAVTKQSWMCVIPAYFAAF*KFLVPS Trigger: AGAGGGAACCAAAAACTTGCAGAAGGCTGCAAAATA...TGCTGGGATTACGCACATCCAACTCTGTTTTGTAACTGCTATTAACACGTATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| CDS-3UTR CCA 90 bp | AGATCCTTAGTTATGGATCCAGTTTTCACATTTCCAGGCCTAACCTTTGCTCTTTTCTCGATGTTTATCTaGTGTTTTCTTAGCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSLVMDPVFTFPGLTFALFSMFI*CFLSLS Trigger: GGAGAGGCTAAGAAAACACCAGATAAACATCGAGAA...AAGAGCAAAGGTTAGGCCTGGAAATGTGAAAACTGGATCCATAACTAAGGATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS GCA 90 bp | CACCCCACCACCAAGTGCAGCTGCAATTCCTGCCACTTTGAAGCCTaGGAGGAGGCCGATGGGACCCCCTACCACTCCTCCGATGAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: HPTTKCSCNSCHFEA*EEADGTPYHSSDEC Trigger: GCACTCATCGGAGGAGTGGTAGGGGGTCCCATCGGCCTCCTCGCAGGCTTCAAAGTGGCAGGAATTGCAGCTGCACTTGGTGGTGGGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS TCA 90 bp | AGCCTAACACCCCACCACCAAGTGCAGCTGCAATTCCTGCCACTTTaGAGCCTGCGAGGAGGCCGATGGGACCCCCTACCACTCCTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SLTPHHQVQLQFLPL*SLRGGRWDPLPLLR Trigger: TCGGAGGAGTGGTAGGGGGTCCCATCGGCCTCCTCGCAGGCTTCAAAGTGGCAGGAATTGCAGCTGCACTTGGTGGTGGGGTGTTAGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR CAA 90 bp | CCTAACACTTCCAGCAACAGCAACTGCTCCTTAGCTCGGTGCACAGCAGCAGCTGCAATTCCTGCCACTTaGAAGCCTGCGAGGAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PNTSSNSNCSLARCTAAAAIPAT*KPARRP Trigger: CGGCCTCCTCGCAGGCTTCAAAGTGGCAGGAATTGC...AGCTGCTGCTGTGCACCGAGCTAAGGAGCAGTTGCTGTTGCTGGAAGTGTTAGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR CAA 90 bp | ACCAGCTTCCAGTCCTCACTCTGCAGAAGACATGAACACGGAAGGTGGACAGGCGCAATTCCTGCCACTTaGAAGCCTGCGAGGAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TSFQSSLCRRHEHGRWTGAIPAT*KPARRP Trigger: CGGCCTCCTCGCAGGCTTCAAAGTGGCAGGAATTGC...GCCTGTCCACCTTCCGTGTTCATGTCTTCTGCAGAGTGAGGACTGGAAGCTGGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| CDS CCA 90 bp | ACTCCGGAGGCAGAGACAGATGGATCTCTGAGTTCAAGGCCAGCCTaGTCCTGTGCTCTGGCTGCTGGTGCACTCTTCTCAGGAAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: TPEAETDGSLSSRPA*SCALAAGALFSGRD Trigger: ATCTCTTCCTGAGAAGAGTGCACCAGCAGCCAGAGCACAGGACCAGGCTGGCCTTGAACTCAGAGATCCATCTGTCTCTGCCTCCGGAGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107721.8 |
||
| CDS-3UTR CAA 90 bp | CGGGTAAACCCCAGTCCGTGCTCCAGAGGTCTGGCGAGTTCTAGGCAGCTTCAGTCCATTTCTCGGATATaGGAGCGCAGTTGCTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RVNPSPCSRGLASSRQLQSISRI*ERSCFS Trigger: CGAGAAGCAACTGCGCTCCAATATCCGAGAAATGGA...CTGAAGCTGCCTAGAACTCGCCAGACCTCTGGAGCACGGACTGGGGTTTACCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107721.8 |
||
| CDS-3UTR CAA 90 bp | AGGTGTGGCTTGCCCAGGAGGGTCTTGCTCCAGGCTTTCACTCCTCTCTCCAGAGTTGCTGCTGCTTCCTaGACAGGATCTATCATTCGC | + |
|
Preference number: 5 (lower is better) Translates to: RCGLPRRVLLQAFTPLSRVAAAS*TGSIIR Trigger: GCGAATGATAGATCCTGTCAAGGAAGCAGCAGCAAC...TCTGGAGAGAGGAGTGAAAGCCTGGAGCAAGACCCTCCTGGGCAAGCCACACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| CDS-3UTR CAA 90 bp | CCTAACACTTCCAGCAACAGCAACTGCTCCTTAGCTCGGTGCACAGCAGCAGCTGCACTCCATCAACAGTaGTGGATCTGGTCAGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PNTSSNSNCSLARCTAAAALHQQ*WIWSEK Trigger: CTTCTCTGACCAGATCCACAACTGTTGATGGAGTGC...AGCTGCTGCTGTGCACCGAGCTAAGGAGCAGTTGCTGTTGCTGGAAGTGTTAGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR CAA 90 bp | GCAACAGTAGCATTCTTCTCTAGGATGGTAAGGTGTGGCTTGCCCAGGAGGGTCGTTGCTGCTGCTTCCTaGACAGGATCTATCATTCGC | + |
|
Preference number: 5 (lower is better) Translates to: ATVAFFSRMVRCGLPRRVVAAAS*TGSIIR Trigger: GCGAATGATAGATCCTGTCAAGGAAGCAGCAGCAAC...GACCCTCCTGGGCAAGCCACACCTTACCATCCTAGAGAAGAATGCTACTGTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| CDS-3UTR CAA 90 bp | TCACTCTGCAGAAGACATGAACACGGAAGGTGGACAGGCAGGACAGCTGTGGCTGGACTCAGCAGCATTTaGGTCTTGAGGAATTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLCRRHEHGRWTGRTAVAGLSSI*VLRNFR Trigger: CCTGAAATTCCTCAAGACCAAAATGCTGCTGAGTCC...AGCCACAGCTGTCCTGCCTGTCCACCTTCCGTGTTCATGTCTTCTGCAGAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| CDS GCA 90 bp | AGACTCCTGAACTCGAATTCTGTTCCTCCCTGCCACAGGCAGAGCTaGCAGCTTGTATTTTGCAGCCTTCTGCAAGTTTTTGGTTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RLLNSNSVPPCHRQS*QLVFCSLLQVFGSL Trigger: GAGGGAACCAAAAACTTGCAGAAGGCTGCAAAATACAAGCTGGCAGCTCTGCCTGTGGCAGGGAGGAACAGAATTCGAGTTCAGGAGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107721.8 |
||
| CDS-3UTR CAA 90 bp | CGGGTAAACCCCAGTCCGTGCTCCAGAGGTCTGGCGAGTTCTAGGCAGCTTCAGTTCTTCATCGTTGACTaGTTTCTTGAGTTCTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: RVNPSPCSRGLASSRQLQFFIVD*FLEFFN Trigger: GTTGAAGAACTCAAGAAACAAGTCAACGATGAAGAA...CTGAAGCTGCCTAGAACTCGCCAGACCTCTGGAGCACGGACTGGGGTTTACCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| CDS-3UTR CAA 90 bp | GTAGCATTCTTCTCTAGGATGGTAAGGTGTGGCTTGCCCAGGAGGGTCTTGCTCGGACTCAGCAGCATTTaGGTCTTGAGGAATTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VAFFSRMVRCGLPRRVLLGLSSI*VLRNFR Trigger: CCTGAAATTCCTCAAGACCAAAATGCTGCTGAGTCC...GAGCAAGACCCTCCTGGGCAAGCCACACCTTACCATCCTAGAGAAGAATGCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| CDS-3UTR CAA 90 bp | AGCTTCCAGTCCTCACTCTGCAGAAGACATGAACACGGAAGGTGGACAGGCAGGCTGCCAGCTTGTATTTaGCAGCCTTCTGCAAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SFQSSLCRRHEHGRWTGRLPACI*QPSASF Trigger: AAAACTTGCAGAAGGCTGCAAAATACAAGCTGGCAG...CCTGCCTGTCCACCTTCCGTGTTCATGTCTTCTGCAGAGTGAGGACTGGAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| CDS-3UTR CAA 90 bp | TCACTCTGCAGAAGACATGAACACGGAAGGTGGACAGGCAGGACAGCTGTGGCTCTGCCAGCTTGTATTTaGCAGCCTTCTGCAAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SLCRRHEHGRWTGRTAVALPACI*QPSASF Trigger: AAAACTTGCAGAAGGCTGCAAAATACAAGCTGGCAG...AGCCACAGCTGTCCTGCCTGTCCACCTTCCGTGTTCATGTCTTCTGCAGAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| CDS GCA 90 bp | AGATTCCAAGTGGAGCTGGAGGAACTCTGCCGTAGCTGTTGCTGCTaGTTCCTTGACAGGATCTATCATTCGCTTCAAAAGGACCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: RFQVELEELCRSCCC*FLDRIYHSLQKDQI Trigger: GATCTGGTCCTTTTGAAGCGAATGATAGATCCTGTCAAGGAAGCAGCAGCAACAGCTACGGCAGAGTTCCTCCAGCTCCACTTGGAATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 ENSMUST00000107721.8 ENSMUST00000153502.8 |
||
| CDS GCA 90 bp | AACAGATTCCAAGTGGAGCTGGAGGAACTCTGCCGTAGCTGTTGCTaGTGCTTCCTTGACAGGATCTATCATTCGCTTCAAAAGGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: NRFQVELEELCRSCC*CFLDRIYHSLQKDQ Trigger: CTGGTCCTTTTGAAGCGAATGATAGATCCTGTCAAGGAAGCAGCAGCAACAGCTACGGCAGAGTTCCTCCAGCTCCACTTGGAATCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 ENSMUST00000107721.8 ENSMUST00000153502.8 |
||
| CDS-3UTR CAA 90 bp | TCAACACTGCATGGACAGGGAGAGCCACTTCCTAACACTTCCAGCAACAGCAACAGCAGCATTTTGGTCTaGAGGAATTTCAGGCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: STLHGQGEPLPNTSSNSNSSILV*RNFRQG Trigger: GCCTTGCCTGAAATTCCTCAAGACCAAAATGCTGCT...GTTGCTGTTGCTGGAAGTGTTAGGAAGTGGCTCTCCCTGTCCATGCAGTGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR CAA 90 bp | TCAACACTGCATGGACAGGGAGAGCCACTTCCTAACACTTCCAGCAACAGCAACGGACTCAGCAGCATTTaGGTCTTGAGGAATTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: STLHGQGEPLPNTSSNSNGLSSI*VLRNFR Trigger: CCTGAAATTCCTCAAGACCAAAATGCTGCTGAGTCC...GTTGCTGTTGCTGGAAGTGTTAGGAAGTGGCTCTCCCTGTCCATGCAGTGTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS-3UTR CAA 90 bp | CCCAAGGGTGCGAGCTTCATATCCAAGCCTCAGCCCTGTTTCTTTGGCTTCCATGCCTTCTGCAAGTTTTaGGTTCCCTCTTCAACATTC | + |
|
Preference number: 5 (lower is better) Translates to: PKGASFISKPQPCFFGFHAFCKF*VPSSTF Trigger: GAATGTTGAAGAGGGAACCAAAAACTTGCAGAAGGC...ATGGAAGCCAAAGAAACAGGGCTGAGGCTTGGATATGAAGCTCGCACCCTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
||
| CDS-3UTR CAA 90 bp | CATGGTGGTTCAACACTGCATGGACAGGGAGAGCCACTTCCTAACACTTCCAGCCTGCCAGCTTGTATTTaGCAGCCTTCTGCAAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: HGGSTLHGQGEPLPNTSSLPACI*QPSASF Trigger: AAAACTTGCAGAAGGCTGCAAAATACAAGCTGGCAG...GCTGGAAGTGTTAGGAAGTGGCTCTCCCTGTCCATGCAGTGTTGAACCACCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
||
| CDS TCA 90 bp | TGTCAATCTTCTCCTGCTGAGAACTCACTAGGAGGGACATGTCAGTaGCCAGATGGCTCAGCTCAATTAAGTCCGCTTCTAAGGTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: CQSSPAENSLGGTCQ*PDGSAQLSPLLRFP Trigger: GGGAAACCTTAGAAGCGGACTTAATTGAGCTGAGCCATCTGGTCACTGACATGTCCCTCCTAGTGAGTTCTCAGCAGGAGAAGATTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| CDS GCA 90 bp | TTCAACAGATTCCAAGTGGAGCTGGAGGAACTCTGCCGTAGCTGTTaGTGCTGCTTCCTTGACAGGATCTATCATTCGCTTCAAAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FNRFQVELEELCRSC*CCFLDRIYHSLQKD Trigger: GTCCTTTTGAAGCGAATGATAGATCCTGTCAAGGAAGCAGCAGCAACAGCTACGGCAGAGTTCCTCCAGCTCCACTTGGAATCTGTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 ENSMUST00000107721.8 ENSMUST00000153502.8 |
||
| CDS CCA 90 bp | TCGTTGACTTGTTTCTTGAGTTCTTCAACAGATTCCAAGTGGAGCTaGAGGAACTCTGCCGTAGCTGTTGCTGCTGCTTCCTTGACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLTCFLSSSTDSKWS*RNSAVAVAAASLTG Trigger: TCCTGTCAAGGAAGCAGCAGCAACAGCTACGGCAGAGTTCCTCCAGCTCCACTTGGAATCTGTTGAAGAACTCAAGAAACAAGTCAACGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 ENSMUST00000107721.8 ENSMUST00000153502.8 |
||
| CDS-3UTR CAA 90 bp | CGTGTTAATAGCAGTTACAAAACAGAGTTGGATGTGCGTAATCCCAGCAGGAGGTTCACAGCGGCACTGTaGACATGGTCTGCAATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RVNSSYKTELDVRNPSRRFTAAL*TWSAML Trigger: CAGCATTGCAGACCATGTCAACAGTGCCGCTGTGAA...CCTCCTGCTGGGATTACGCACATCCAACTCTGTTTTGTAACTGCTATTAACACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
||
| CDS-3UTR CAA 90 bp | GTGGTTCAACACTGCATGGACAGGGAGAGCCACTTCCTAACACTTCCAGCAACAGCCTTCTGCAAGTTTTaGGTTCCCTCTTCAACATTC | + |
|
Preference number: 5 (lower is better) Translates to: VVQHCMDRESHFLTLPATAFCKF*VPSSTF Trigger: GAATGTTGAAGAGGGAACCAAAAACTTGCAGAAGGC...TGTTGCTGGAAGTGTTAGGAAGTGGCTCTCCCTGTCCATGCAGTGTTGAACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
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| CDS-3UTR CAA 90 bp | ATCTCCATTAACACCCAGCTAACAAACACATCCACTCATGGTGGTTCAACACTGTTCACAGCGGCACTGTaGACATGGTCTGCAATGCTG | + |
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Preference number: 5 (lower is better) Translates to: ISINTQLTNTSTHGGSTLFTAAL*TWSAML Trigger: CAGCATTGCAGACCATGTCAACAGTGCCGCTGTGAA...CAGTGTTGAACCACCATGAGTGGATGTGTTTGTTAGCTGGGTGTTAATGGAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
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| CDS TCA 90 bp | TCTGCAAGTTTTTGGTTCCCTCTTCAACATTCACAGCGGCACTGTTaGCATGGTCTGCAATGCTGTCAATCTTCTCCTGCTGAGAACTCA | + |
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Preference number: 5 (lower is better) Translates to: SASFWFPLQHSQRHC*HGLQCCQSSPAENS Trigger: TGAGTTCTCAGCAGGAGAAGATTGACAGCATTGCAGACCATGTCAACAGTGCCGCTGTGAATGTTGAAGAGGGAACCAAAAACTTGCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 ENSMUST00000107721.8 |
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| CDS-3UTR CAA 90 bp | CTCATGGTGGTTCAACACTGCATGGACAGGGAGAGCCACTTCCTAACACTTCCATCGTTGACTTGTTTCTaGAGTTCTTCAACAGATTCC | + |
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Preference number: 5 (lower is better) Translates to: LMVVQHCMDRESHFLTLPSLTCF*SSSTDS Trigger: GGAATCTGTTGAAGAACTCAAGAAACAAGTCAACGA...TGGAAGTGTTAGGAAGTGGCTCTCCCTGTCCATGCAGTGTTGAACCACCATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
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| CDS-3UTR CAA 90 bp | AATAGCAGTTACAAAACAGAGTTGGATGTGCGTAATCCCAGCAGGAGGATTGCAAGCAGCATTTTGGTCTaGAGGAATTTCAGGCAAGGC | + |
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Preference number: 5 (lower is better) Translates to: NSSYKTELDVRNPSRRIASSILV*RNFRQG Trigger: GCCTTGCCTGAAATTCCTCAAGACCAAAATGCTGCT...TGCAATCCTCCTGCTGGGATTACGCACATCCAACTCTGTTTTGTAACTGCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
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| CDS-3UTR CAA 90 bp | GAATACGTGTTAATAGCAGTTACAAAACAGAGTTGGATGTGCGTAATCCCAGCATTCACAGCGGCACTGTaGACATGGTCTGCAATGCTG | + |
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Preference number: 5 (lower is better) Translates to: EYVLIAVTKQSWMCVIPAFTAAL*TWSAML Trigger: CAGCATTGCAGACCATGTCAACAGTGCCGCTGTGAA...TGCTGGGATTACGCACATCCAACTCTGTTTTGTAACTGCTATTAACACGTATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
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| CDS-3UTR CAA 90 bp | AAAATCTCCATTAACACCCAGCTAACAAACACATCCACTCATGGTGGTTCAACAGTTGCTGCTGCTTCCTaGACAGGATCTATCATTCGC | + |
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Preference number: 5 (lower is better) Translates to: KISINTQLTNTSTHGGSTVAAAS*TGSIIR Trigger: GCGAATGATAGATCCTGTCAAGGAAGCAGCAGCAAC...TGTTGAACCACCATGAGTGGATGTGTTTGTTAGCTGGGTGTTAATGGAGATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
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| CDS-3UTR CAA 90 bp | AGATCCTTAGTTATGGATCCAGTTTTCACATTTCCAGGCCTAACCTTTGCTCTTGCACTCCATCAACAGTaGTGGATCTGGTCAGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: RSLVMDPVFTFPGLTFALALHQQ*WIWSEK Trigger: CTTCTCTGACCAGATCCACAACTGTTGATGGAGTGC...AAGAGCAAAGGTTAGGCCTGGAAATGTGAAAACTGGATCCATAACTAAGGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
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| CDS-3UTR CAA 90 bp | GAATACGTGTTAATAGCAGTTACAAAACAGAGTTGGATGTGCGTAATCCCAGCAGCACTCCATCAACAGTaGTGGATCTGGTCAGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: EYVLIAVTKQSWMCVIPAALHQQ*WIWSEK Trigger: CTTCTCTGACCAGATCCACAACTGTTGATGGAGTGC...TGCTGGGATTACGCACATCCAACTCTGTTTTGTAACTGCTATTAACACGTATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
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| CDS-3UTR CAA 90 bp | TACTGTGTGCTAGAGATTTGTAGTTGTGTTTCCAAACTTCTTGTTATCAGTAGGAGCAGCATTTTGGTCTaGAGGAATTTCAGGCAAGGC | + |
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Preference number: 5 (lower is better) Translates to: YCVLEICSCVSKLLVISRSSILV*RNFRQG Trigger: GCCTTGCCTGAAATTCCTCAAGACCAAAATGCTGCT...CCTACTGATAACAAGAAGTTTGGAAACACAACTACAAATCTCTAGCACACAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
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| CDS-3UTR CAA 90 bp | CCAACTGGTGAATACAAACAGAACCACTCATTAGGAATACGTGTTAATAGCAGTGCCTTCTGCAAGTTTTaGGTTCCCTCTTCAACATTC | + |
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Preference number: 5 (lower is better) Translates to: PTGEYKQNHSLGIRVNSSAFCKF*VPSSTF Trigger: GAATGTTGAAGAGGGAACCAAAAACTTGCAGAAGGC...ACTGCTATTAACACGTATTCCTAATGAGTGGTTCTGTTTGTATTCACCAGTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
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| CDS-3UTR CAA 90 bp | GAATACGTGTTAATAGCAGTTACAAAACAGAGTTGGATGTGCGTAATCCCAGCATCGTTGACTTGTTTCTaGAGTTCTTCAACAGATTCC | + |
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Preference number: 5 (lower is better) Translates to: EYVLIAVTKQSWMCVIPASLTCF*SSSTDS Trigger: GGAATCTGTTGAAGAACTCAAGAAACAAGTCAACGA...TGCTGGGATTACGCACATCCAACTCTGTTTTGTAACTGCTATTAACACGTATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107720.9 ENSMUST00000107721.8 |
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| CDS-3UTR CAA 90 bp | AAAATCTCCATTAACACCCAGCTAACAAACACATCCACTCATGGTGGTTCAACATTCTTCATCGTTGACTaGTTTCTTGAGTTCTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: KISINTQLTNTSTHGGSTFFIVD*FLEFFN Trigger: GTTGAAGAACTCAAGAAACAAGTCAACGATGAAGAA...TGTTGAACCACCATGAGTGGATGTGTTTGTTAGCTGGGTGTTAATGGAGATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
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| CDS-3UTR CAA 90 bp | ATGTTTGAGATGTGTATGCAAAAAGCAAACTATTGTGTGTCCTGCTCAAACAAGTTCTTCATCGTTGACTaGTTTCTTGAGTTCTTCAAC | + |
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Preference number: 5 (lower is better) Translates to: MFEMCMQKANYCVSCSNKFFIVD*FLEFFN Trigger: GTTGAAGAACTCAAGAAACAAGTCAACGATGAAGAA...CTTGTTTGAGCAGGACACACAATAGTTTGCTTTTTGCATACACATCTCAAACAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107720.9 |
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| CDS TCA 72 bp | CGAGGAGGCCGATGGGACCCCCTACCACTCCTCCGATaGGTGCACCTGCCACAGGCAGAGCTGCCAGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: RGGRWDPLPLLR*VHLPQAELPAC Trigger: ACAAGCTGGCAGCTCTGCCTGTGGCAGGTGCACTCATCGGAGGAGTGGTAGGGGGTCCCATCGGCCTCCTCG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
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| CDS TCA 72 bp | CCCCACCACCAAGTGCAGCTGCAATTCCTGCCACTTTaGAGCCTGCGAGGAGGCCGATGGGACCCCCTACCA | + |
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Preference number: 6 (lower is better) Translates to: PHHQVQLQFLPL*SLRGGRWDPLP Trigger: TGGTAGGGGGTCCCATCGGCCTCCTCGCAGGCTTCAAAGTGGCAGGAATTGCAGCTGCACTTGGTGGTGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
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| CDS GCA 72 bp | GAGGCCGATGGGACCCCCTACCACTCCTCCGATGAGTaGACCTGCCACAGGCAGAGCTGCCAGCTTGTATTT | + |
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Preference number: 6 (lower is better) Translates to: EADGTPYHSSDE*TCHRQSCQLVF Trigger: AAATACAAGCTGGCAGCTCTGCCTGTGGCAGGTGCACTCATCGGAGGAGTGGTAGGGGGTCCCATCGGCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
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| CDS GCA 72 bp | ACCAAGTGCAGCTGCAATTCCTGCCACTTTGAAGCCTaGGAGGAGGCCGATGGGACCCCCTACCACTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: TKCSCNSCHFEA*EEADGTPYHSS Trigger: GGAGGAGTGGTAGGGGGTCCCATCGGCCTCCTCGCAGGCTTCAAAGTGGCAGGAATTGCAGCTGCACTTGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
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| CDS TCA 72 bp | ATCCCAGCACTCCGGAGGCAGAGACAGATGGATCTCTaGGTTCAAGGCCAGCCTGGTCCTGTGCTCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: IPALRRQRQMDL*VQGQPGPVLWL Trigger: CAGCCAGAGCACAGGACCAGGCTGGCCTTGAACTCAGAGATCCATCTGTCTCTGCCTCCGGAGTGCTGGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107721.8 |
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| CDS GCA 72 bp | GATGGGACCCCCTACCACTCCTCCGATGAGTGCACCTaGCACAGGCAGAGCTGCCAGCTTGTATTTTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: DGTPYHSSDECT*HRQSCQLVFCS Trigger: GCTGCAAAATACAAGCTGGCAGCTCTGCCTGTGGCAGGTGCACTCATCGGAGGAGTGGTAGGGGGTCCCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
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| CDS TCA 72 bp | AGCTTCTCCATTTCTCGGATATTGGAGCGCAGTTGCTaGACCGTGCGCCCTGCGTTGATGTGCTCTTCGTGC | + |
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Preference number: 6 (lower is better) Translates to: SFSISRILERSC*TVRPALMCSSC Trigger: GCACGAAGAGCACATCAACGCAGGGCGCACGGTTCAGCAACTGCGCTCCAATATCCGAGAAATGGAGAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 ENSMUST00000153502.8 |
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| CDS TCA 72 bp | TATTGGAGCGCAGTTGCTGAACCGTGCGCCCTGCGTTaGTGTGCTCTTCGTGCAACTTGTCCCAAATTCTGC | + |
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Preference number: 6 (lower is better) Translates to: YWSAVAEPCALR*CALRATCPKFC Trigger: GCAGAATTTGGGACAAGTTGCACGAAGAGCACATCAACGCAGGGCGCACGGTTCAGCAACTGCGCTCCAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 ENSMUST00000153502.8 |
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| CDS GCA 72 bp | TCGGATATTGGAGCGCAGTTGCTGAACCGTGCGCCCTaGGTTGATGTGCTCTTCGTGCAACTTGTCCCAAAT | + |
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Preference number: 6 (lower is better) Translates to: SDIGAQLLNRAP*VDVLFVQLVPN Trigger: ATTTGGGACAAGTTGCACGAAGAGCACATCAACGCAGGGCGCACGGTTCAGCAACTGCGCTCCAATATCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 ENSMUST00000153502.8 |
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| CDS CAA 72 bp | GCAAAGCTTCTCCATTTCTCGGATATTGGAGCGCAGTaGCTGAACCGTGCGCCCTGCGTTGATGTGCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: AKLLHFSDIGAQ*LNRAPCVDVLF Trigger: GAAGAGCACATCAACGCAGGGCGCACGGTTCAGCAACTGCGCTCCAATATCCGAGAAATGGAGAAGCTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 ENSMUST00000153502.8 |
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| CDS GCA 72 bp | CACTCCTCCGATGAGTGCACCTGCCACAGGCAGAGCTaGCAGCTTGTATTTTGCAGCCTTCTGCAAGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: HSSDECTCHRQS*QLVFCSLLQVF Trigger: AAAAACTTGCAGAAGGCTGCAAAATACAAGCTGGCAGCTCTGCCTGTGGCAGGTGCACTCATCGGAGGAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 |
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| CDS GCA 72 bp | CAAGTGGAGCTGGAGGAACTCTGCCGTAGCTGTTGCTaGTGCTTCCTTGACAGGATCTATCATTCGCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: QVELEELCRSCC*CFLDRIYHSLQ Trigger: TTGAAGCGAATGATAGATCCTGTCAAGGAAGCAGCAGCAACAGCTACGGCAGAGTTCCTCCAGCTCCACTTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 ENSMUST00000107721.8 ENSMUST00000153502.8 |
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| CDS GCA 72 bp | TTCCAAGTGGAGCTGGAGGAACTCTGCCGTAGCTGTTaGTGCTGCTTCCTTGACAGGATCTATCATTCGCTT | + |
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Preference number: 6 (lower is better) Translates to: FQVELEELCRSC*CCFLDRIYHSL Trigger: AAGCGAATGATAGATCCTGTCAAGGAAGCAGCAGCAACAGCTACGGCAGAGTTCCTCCAGCTCCACTTGGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 ENSMUST00000107721.8 ENSMUST00000153502.8 |
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| CDS TCA 72 bp | TCTCCTGCTGAGAACTCACTAGGAGGGACATGTCAGTaGCCAGATGGCTCAGCTCAATTAAGTCCGCTTCTA | + |
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Preference number: 6 (lower is better) Translates to: SPAENSLGGTCQ*PDGSAQLSPLL Trigger: TAGAAGCGGACTTAATTGAGCTGAGCCATCTGGTCACTGACATGTCCCTCCTAGTGAGTTCTCAGCAGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 ENSMUST00000107721.8 |
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| CDS CCA 72 bp | TGTTTCTTGAGTTCTTCAACAGATTCCAAGTGGAGCTaGAGGAACTCTGCCGTAGCTGTTGCTGCTGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: CFLSSSTDSKWS*RNSAVAVAAAS Trigger: GGAAGCAGCAGCAACAGCTACGGCAGAGTTCCTCCAGCTCCACTTGGAATCTGTTGAAGAACTCAAGAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 ENSMUST00000107721.8 ENSMUST00000153502.8 |
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| CDS CCA 72 bp | CAGCCTCCCCAGTGTGGAGCACTCCATCAACAGTTGTaGATCTGGTCAGAGAAGGCTGAAGTAATTCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: QPPQCGALHQQL*IWSEKAEVILH Trigger: ATGAAGAATTACTTCAGCCTTCTCTGACCAGATCCACAACTGTTGATGGAGTGCTCCACACTGGGGAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 ENSMUST00000107721.8 |
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| CDS GCA 72 bp | CTCTTCAACATTCACAGCGGCACTGTTGACATGGTCTaGAATGCTGTCAATCTTCTCCTGCTGAGAACTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LFNIHSGTVDMV*NAVNLLLLRTH Trigger: GTGAGTTCTCAGCAGGAGAAGATTGACAGCATTGCAGACCATGTCAACAGTGCCGCTGTGAATGTTGAAGAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 ENSMUST00000107721.8 |
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| CDS GCA 72 bp | AACTCGAATTCTGTTCCTCCCTGCCACAGGCAGAGCTaGCAGCTTGTATTTTGCAGCCTTCTGCAAGTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: NSNSVPPCHRQS*QLVFCSLLQVF Trigger: AAAAACTTGCAGAAGGCTGCAAAATACAAGCTGGCAGCTCTGCCTGTGGCAGGGAGGAACAGAATTCGAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107721.8 |
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| CDS TCA 72 bp | TTTTGGTTCCCTCTTCAACATTCACAGCGGCACTGTTaGCATGGTCTGCAATGCTGTCAATCTTCTCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: FWFPLQHSQRHC*HGLQCCQSSPA Trigger: AGCAGGAGAAGATTGACAGCATTGCAGACCATGTCAACAGTGCCGCTGTGAATGTTGAAGAGGGAACCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 ENSMUST00000107721.8 |
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| CDS CCA 72 bp | TTGACTTGTTTCTTGAGTTCTTCAACAGATTCCAAGTaGAGCTGGAGGAACTCTGCCGTAGCTGTTGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LTCFLSSSTDSK*SWRNSAVAVAA Trigger: AGCAGCAACAGCTACGGCAGAGTTCCTCCAGCTCCACTTGGAATCTGTTGAAGAACTCAAGAAACAAGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 ENSMUST00000107721.8 ENSMUST00000153502.8 |
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| CDS CAA 72 bp | TTTTTGGTTCCCTCTTCAACATTCACAGCGGCACTGTaGACATGGTCTGCAATGCTGTCAATCTTCTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: FLVPSSTFTAAL*TWSAMLSIFSC Trigger: GCAGGAGAAGATTGACAGCATTGCAGACCATGTCAACAGTGCCGCTGTGAATGTTGAAGAGGGAACCAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 ENSMUST00000107721.8 |
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| CDS CCA 72 bp | GCACTTTCAAGCAAAGCTTCTCCATTTCTCGGATATTaGAGCGCAGTTGCTTCTCGATGTTTATCTGGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: ALSSKASPFLGY*SAVASRCLSGV Trigger: AACACCAGATAAACATCGAGAAGCAACTGCGCTCCAATATCCGAGAAATGGAGAAGCTTTGCTTGAAAGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107721.8 |
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| CDS CAA 72 bp | GGATCTATCATTCGCTTCAAAAGGACCAGATCATCCTaGTGCACTTTCAAGCAAAGCTTCTCCATTTCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: GSIIRFKRTRSS*CTFKQSFSISR Trigger: CCGAGAAATGGAGAAGCTTTGCTTGAAAGTGCACAAGGATGATCTGGTCCTTTTGAAGCGAATGATAGATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064765.6 ENSMUST00000107720.9 ENSMUST00000107721.8 ENSMUST00000153502.8 |
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| CDS CAA 72 bp | TGCACTTTCAAGCAAAGCTTCTCCATTTCTCGGATATaGGAGCGCAGTTGCTTCTCGATGTTTATCTGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: CTFKQSFSISRI*ERSCFSMFIWC Trigger: ACACCAGATAAACATCGAGAAGCAACTGCGCTCCAATATCCGAGAAATGGAGAAGCTTTGCTTGAAAGTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107721.8 |
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| CDS TCA 72 bp | TCTTCCTATTCCTTTCTTCTGAATCTCAAACCTTTCTaGCAGAGACTCCTGAACTCGAATTCTGTTCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: SSYSFLLNLKPF*QRLLNSNSVPP Trigger: GGGAGGAACAGAATTCGAGTTCAGGAGTCTCTGTCAGAAAGGTTTGAGATTCAGAAGAAAGGAATAGGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107721.8 |
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