Pregenerated sensors for STX16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027522Ensembl transcript IDs: ENSMUST00000044638.13, ENSMUST00000087908.10, ENSMUST00000147038.8, ENSMUST00000155000.8, ENSMUST00000156054.2
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCGGACTCTCACCAGGGTGGCGTGGGCCCAGACCAGCACCACACTaGCTCCAGGCAGAAGGGGACAGTCCCTCTCCCCATAGGTCCTTG | + |
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Preference number: 1 (lower is better) Translates to: SGLSPGWRGPRPAPH*LQAEGDSPSPHRSL Trigger: CAAGGACCTATGGGGAGAGGGACTGTCCCCTTCTGCCTGGAGGCAGTGTGGTGCTGGTCTGGGCCCACGCCACCCTGGTGAGAGTCCGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR CCA 90 bp | CTTCCACCCCAATTCTACAAAAGCCAGCAGGGCAGCAGAGGGAGGTaGTGTCCGTCCAGAGGCCGGGCTTCCCAGGCACAGGGACAGACG | + |
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Preference number: 1 (lower is better) Translates to: LPPQFYKSQQGSRGR*CPSRGRASQAQGQT Trigger: CGTCTGTCCCTGTGCCTGGGAAGCCCGGCCTCTGGACGGACACCACCTCCCTCTGCTGCCCTGCTGGCTTTTGTAGAATTGGGGTGGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR GCA 90 bp | GCCTACACGCCAGCCCACTGGTTAGAAGGTGTCCACGGGAAGGTCTaGTGCCCACTGATGGACCAGTGGGCTGTGCTCTTTACACAGTGC | + |
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Preference number: 1 (lower is better) Translates to: AYTPAHWLEGVHGKV*CPLMDQWAVLFTQC Trigger: GCACTGTGTAAAGAGCACAGCCCACTGGTCCATCAGTGGGCAGCAGACCTTCCCGTGGACACCTTCTAACCAGTGGGCTGGCGTGTAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR CCA 90 bp | AACTTCTCCTCTTTCCCCCAGAACAGGCTCAACGGCAAAGGGCAGTaGGGCCCCAGAGAGCGAGTGCACAGAGCTCTGGAGCTCGGCAAA | + |
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Preference number: 1 (lower is better) Translates to: NFSSFPQNRLNGKGQ*GPRERVHRALELGK Trigger: TTTGCCGAGCTCCAGAGCTCTGTGCACTCGCTCTCTGGGGCCCCACTGCCCTTTGCCGTTGAGCCTGTTCTGGGGGAAAGAGGAGAAGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR GCA 90 bp | TACACGCCAGCCCACTGGTTAGAAGGTGTCCACGGGAAGGTCTGCTaGCCACTGATGGACCAGTGGGCTGTGCTCTTTACACAGTGCAGC | + |
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Preference number: 1 (lower is better) Translates to: YTPAHWLEGVHGKVC*PLMDQWAVLFTQCS Trigger: GCTGCACTGTGTAAAGAGCACAGCCCACTGGTCCATCAGTGGGCAGCAGACCTTCCCGTGGACACCTTCTAACCAGTGGGCTGGCGTGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR CCA 90 bp | CTGGACAGAGATGGAAAACATGGCCGTGCCTACACGCCAGCCCACTaGTTAGAAGGTGTCCACGGGAAGGTCTGCTGCCCACTGATGGAC | + |
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Preference number: 1 (lower is better) Translates to: LDRDGKHGRAYTPAH*LEGVHGKVCCPLMD Trigger: GTCCATCAGTGGGCAGCAGACCTTCCCGTGGACACCTTCTAACCAGTGGGCTGGCGTGTAGGCACGGCCATGTTTTCCATCTCTGTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR TCA 90 bp | CCCACTGATGGACCAGTGGGCTGTGCTCTTTACACAGTGCAGCGGTaGGGCACCAGCCAAGTCCTATCACCAATAATCCACACAGTAGCA | + |
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Preference number: 1 (lower is better) Translates to: PTDGPVGCALYTVQR*GTSQVLSPIIHTVA Trigger: TGCTACTGTGTGGATTATTGGTGATAGGACTTGGCTGGTGCCTCACCGCTGCACTGTGTAAAGAGCACAGCCCACTGGTCCATCAGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR TCA 90 bp | CACACACACACACACACACACACACACACACAGGGTTTCCCTAGCTaGCGTTCTCACTGTCCTCAGGAATACACCCGTTTTCTGGGCATT | + |
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Preference number: 1 (lower is better) Translates to: HTHTHTHTHTQGFPS*RSHCPQEYTRFLGI Trigger: AATGCCCAGAAAACGGGTGTATTCCTGAGGACAGTGAGAACGTCAGCTAGGGAAACCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR GCA 90 bp | TCAATTAGCAGAGAAAATGGTACATCCGTTAAATTAGACACACATTaGTTCACACAGTGGCCCAGCCAGCACCCCAATGTCCCTCCACCC | + |
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Preference number: 1 (lower is better) Translates to: SISRENGTSVKLDTH*FTQWPSQHPNVPPP Trigger: GGGTGGAGGGACATTGGGGTGCTGGCTGGGCCACTGTGTGAAGCAATGTGTGTCTAATTTAACGGATGTACCATTTTCTCTGCTAATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR TCA 90 bp | TTTAGATCTCATTATTCCATGGCCCAGGCAGGGAGAGTGAGTTCATaGTGGGTCTACATGACTCCATTTCTAGGTCTGAGCTGGAGTTTT | + |
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Preference number: 1 (lower is better) Translates to: FRSHYSMAQAGRVSS*WVYMTPFLGLSWSF Trigger: AAAACTCCAGCTCAGACCTAGAAATGGAGTCATGTAGACCCATCATGAACTCACTCTCCCTGCCTGGGCCATGGAATAATGAGATCTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR CCA 90 bp | GTTCTCACTGTCCTCAGGAATACACCCGTTTTCTGGGCATTTAAGTaGCAAGAGTCGATAAATCAAATCATGTGTAGAATATTTTACTTT | + |
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Preference number: 1 (lower is better) Translates to: VLTVLRNTPVFWAFK*QESINQIMCRIFYF Trigger: AAAGTAAAATATTCTACACATGATTTGATTTATCGACTCTTGCCACTTAAATGCCCAGAAAACGGGTGTATTCCTGAGGACAGTGAGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR-3UTR GCA 90 bp | GGGCCCAGACCAGCACCACACTGCCTCCAGGCAGAAGGGGACAGTCCCTCTCCCTGGACCAGTGGGCTGTaGTCTTTACACAGTGCAGCG | + |
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Preference number: 2 (lower is better) Translates to: GPRPAPHCLQAEGDSPSPWTSGL*SLHSAA Trigger: CGCTGCACTGTGTAAAGAGCACAGCCCACTGGTCCA...GGGAGAGGGACTGTCCCCTTCTGCCTGGAGGCAGTGTGGTGCTGGTCTGGGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR-3UTR TCA 90 bp | CAGCCTGAAGGGAAGGATGGACGCACAGACAGCGGCCGTCAGCAGGTACAAGAGCAGGGTTTCCCTAGCTaGCGTTCTCACTGTCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: QPEGKDGRTDSGRQQVQEQGFPS*RSHCPQ Trigger: CTGAGGACAGTGAGAACGTCAGCTAGGGAAACCCTG...CTCTTGTACCTGCTGACGGCCGCTGTCTGTGCGTCCATCCTTCCCTTCAGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR-3UTR GCA 90 bp | CAGCCTGAAGGGAAGGATGGACGCACAGACAGCGGCCGTCAGCAGGTACAAGAGTGGTGGGGTGGGTGCTaGCTCCTCTTTTCTAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: QPEGKDGRTDSGRQQVQEWWGGC*LLFSKP Trigger: AGGCTTAGAAAAGAGGAGGCAGCACCCACCCCACCA...CTCTTGTACCTGCTGACGGCCGCTGTCTGTGCGTCCATCCTTCCCTTCAGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR-3UTR CCA 90 bp | ACACATTGCTTCACACAGTGGCCCAGCCAGCACCCCAATGTCCCTCCACCCCCATCTGAAGTGGTGGGGTaGGTGCTGCCTCCTCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: THCFTQWPSQHPNVPPPPSEVVG*VLPPLF Trigger: GAAAAGAGGAGGCAGCACCCACCCCACCACTTCAGA...TGGGGGTGGAGGGACATTGGGGTGCTGGCTGGGCCACTGTGTGAAGCAATGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR-3UTR CCA 90 bp | CCCCAGAGAGCGAGTGCACAGAGCTCTGGAGCTCGGCAAAGCCCAGTATCCAAGCTGAGGAAGGATGGCTaGGGACACACTGTCAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: PQRASAQSSGARQSPVSKLRKDG*GHTVKL Trigger: AAGCTTGACAGTGTGTCCCCAGCCATCCTTCCTCAG...CTTGGATACTGGGCTTTGCCGAGCTCCAGAGCTCTGTGCACTCGCTCTCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR-3UTR CCA 90 bp | ACACATTGCTTCACACAGTGGCCCAGCCAGCACCCCAATGTCCCTCCACCCCCATGGACTGAGGAAGGATaGCTGGGGACACACTGTCAA | + |
|
Preference number: 2 (lower is better) Translates to: THCFTQWPSQHPNVPPPPWTEEG*LGTHCQ Trigger: TTGACAGTGTGTCCCCAGCCATCCTTCCTCAGTCCA...TGGGGGTGGAGGGACATTGGGGTGCTGGCTGGGCCACTGTGTGAAGCAATGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR-3UTR CCA 90 bp | CAGCCTGAAGGGAAGGATGGACGCACAGACAGCGGCCGTCAGCAGGTACAAGAGTGGACTGAGGAAGGATaGCTGGGGACACACTGTCAA | + |
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Preference number: 2 (lower is better) Translates to: QPEGKDGRTDSGRQQVQEWTEEG*LGTHCQ Trigger: TTGACAGTGTGTCCCCAGCCATCCTTCCTCAGTCCA...CTCTTGTACCTGCTGACGGCCGCTGTCTGTGCGTCCATCCTTCCCTTCAGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR-3UTR TCA 90 bp | CCCCAGAGAGCGAGTGCACAGAGCTCTGGAGCTCGGCAAAGCCCAGTATCCAAGTTTCAGCTGGGAAGATaGAGAGGCACTGCCTCTACA | + |
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Preference number: 2 (lower is better) Translates to: PQRASAQSSGARQSPVSKFQLGR*RGTAST Trigger: TGTAGAGGCAGTGCCTCTTCATCTTCCCAGCTGAAA...CTTGGATACTGGGCTTTGCCGAGCTCCAGAGCTCTGTGCACTCGCTCTCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR-3UTR GCA 90 bp | CAGCCTGAAGGGAAGGATGGACGCACAGACAGCGGCCGTCAGCAGGTACAAGAGGAGGTTGAGAGAGACTaGAGAGTCCCTTCCCCAATT | + |
|
Preference number: 2 (lower is better) Translates to: QPEGKDGRTDSGRQQVQEEVERD*RVPSPI Trigger: AATTGGGGAAGGGACTCTGCAGTCTCTCTCAACCTC...CTCTTGTACCTGCTGACGGCCGCTGTCTGTGCGTCCATCCTTCCCTTCAGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR-3UTR GCA 90 bp | TTCGGCAACAGCATCAAGTCCTTAGACTCTGGACAGAGATGGAAAACATGGCCGCACGGGAAGGTCTGCTaGCCACTGATGGACCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: FGNSIKSLDSGQRWKTWPHGKVC*PLMDQW Trigger: CCACTGGTCCATCAGTGGGCAGCAGACCTTCCCGTG...CGGCCATGTTTTCCATCTCTGTCCAGAGTCTAAGGACTTGATGCTGTTGCCGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR-3UTR CCA 90 bp | CCCCAGAGAGCGAGTGCACAGAGCTCTGGAGCTCGGCAAAGCCCAGTATCCAAGAAACGGAGTCAGGTTTaGACAGGTCATTACGTAGCT | + |
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Preference number: 2 (lower is better) Translates to: PQRASAQSSGARQSPVSKKRSQV*TGHYVA Trigger: AGCTACGTAATGACCTGTCCAAACCTGACTCCGTTT...CTTGGATACTGGGCTTTGCCGAGCTCCAGAGCTCTGTGCACTCGCTCTCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR-3UTR TCA 90 bp | CAGCCTGAAGGGAAGGATGGACGCACAGACAGCGGCCGTCAGCAGGTACAAGAGATTGATTTAAACGCATaGAGCTGGTTTAACTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: QPEGKDGRTDSGRQQVQEIDLNA*SWFNWP Trigger: GGGCCAGTTAAACCAGCTTCATGCGTTTAAATCAAT...CTCTTGTACCTGCTGACGGCCGCTGTCTGTGCGTCCATCCTTCCCTTCAGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR-3UTR CCA 90 bp | CCCCAGAGAGCGAGTGCACAGAGCTCTGGAGCTCGGCAAAGCCCAGTATCCAAGCTTAGTAACCCCTCTTaGTTTACAGTAGAAAATGCA | + |
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Preference number: 2 (lower is better) Translates to: PQRASAQSSGARQSPVSKLSNPS*FTVENA Trigger: TGCATTTTCTACTGTAAACCAAGAGGGGTTACTAAG...CTTGGATACTGGGCTTTGCCGAGCTCCAGAGCTCTGTGCACTCGCTCTCTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR-3UTR CCA 90 bp | CAGCCTGAAGGGAAGGATGGACGCACAGACAGCGGCCGTCAGCAGGTACAAGAGGTGACCCATTTAAAATaGCCTCTGTGTAAATTCACA | + |
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Preference number: 2 (lower is better) Translates to: QPEGKDGRTDSGRQQVQEVTHLK*PLCKFT Trigger: TGTGAATTTACACAGAGGCCATTTTAAATGGGTCAC...CTCTTGTACCTGCTGACGGCCGCTGTCTGTGCGTCCATCCTTCCCTTCAGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR-3UTR CCA 90 bp | CAGCCTGAAGGGAAGGATGGACGCACAGACAGCGGCCGTCAGCAGGTACAAGAGTCCACTAATCCTAAATaGGGTGACCCATTTAAAATG | + |
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Preference number: 2 (lower is better) Translates to: QPEGKDGRTDSGRQQVQESTNPK*GDPFKM Trigger: CATTTTAAATGGGTCACCCCATTTAGGATTAGTGGA...CTCTTGTACCTGCTGACGGCCGCTGTCTGTGCGTCCATCCTTCCCTTCAGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR-3UTR CCA 90 bp | CCAATTCTGAAGTGGTGGGGTGGGTGCTGCCTCCTCTTTTCTAAGCCTCTCTACCAAGTCCTTAGACTCTaGACAGAGATGGAAAACATG | + |
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Preference number: 2 (lower is better) Translates to: PILKWWGGCCLLFSKPLYQVLRL*TEMENM Trigger: CATGTTTTCCATCTCTGTCCAGAGTCTAAGGACTTG...GTAGAGAGGCTTAGAAAAGAGGAGGCAGCACCCACCCCACCACTTCAGAATTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR-3UTR GCA 90 bp | GGGAAGATGAAGAGGCACTGCCTCTACACTCATAAATTTTTGGTACCAAACTTCTGGACCAGTGGGCTGTaGTCTTTACACAGTGCAGCG | + |
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Preference number: 2 (lower is better) Translates to: GKMKRHCLYTHKFLVPNFWTSGL*SLHSAA Trigger: CGCTGCACTGTGTAAAGAGCACAGCCCACTGGTCCA...GAAGTTTGGTACCAAAAATTTATGAGTGTAGAGGCAGTGCCTCTTCATCTTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR-3UTR GCA 90 bp | AAGCTTTCTTGTAATGTGAGGTTGGTTCAAATGACCAAGTTTCTGATTCAGGAGCACGGGAAGGTCTGCTaGCCACTGATGGACCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: KLSCNVRLVQMTKFLIQEHGKVC*PLMDQW Trigger: CCACTGGTCCATCAGTGGGCAGCAGACCTTCCCGTG...CTCCTGAATCAGAAACTTGGTCATTTGAACCAACCTCACATTACAAGAAAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR-3UTR CCA 90 bp | AAAGAATCCAGAAAACCTTTAGATCTCATTATTCCATGGCCCAGGCAGGGAGAGGACTCTGGACAGAGATaGAAAACATGGCCGTGCCTA | + |
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Preference number: 2 (lower is better) Translates to: KESRKPLDLIIPWPRQGEDSGQR*KTWPCL Trigger: TAGGCACGGCCATGTTTTCCATCTCTGTCCAGAGTC...CTCTCCCTGCCTGGGCCATGGAATAATGAGATCTAAAGGTTTTCTGGATTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR-3UTR CCA 90 bp | CATTGCCAAAGAATCCAGAAAACCTTTAGATCTCATTATTCCATGGCCCAGGCACTGAGGAAGGATGGCTaGGGACACACTGTCAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: HCQRIQKTFRSHYSMAQALRKDG*GHTVKL Trigger: AAGCTTGACAGTGTGTCCCCAGCCATCCTTCCTCAG...TGCCTGGGCCATGGAATAATGAGATCTAAAGGTTTTCTGGATTCTTTGGCAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR-3UTR CCA 90 bp | AAAGAATCCAGAAAACCTTTAGATCTCATTATTCCATGGCCCAGGCAGGGAGAGTGCTTTGTTTTCAGCTaGGAAGATGAAGAGGCACTG | + |
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Preference number: 2 (lower is better) Translates to: KESRKPLDLIIPWPRQGECFVFS*EDEEAL Trigger: CAGTGCCTCTTCATCTTCCCAGCTGAAAACAAAGCA...CTCTCCCTGCCTGGGCCATGGAATAATGAGATCTAAAGGTTTTCTGGATTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR CAA 90 bp | AAGGATGGCTGGGGACACACTGTCAAGCTTTCTTGTAATGTGAGGTaGGTTCAAATGACCAAGTTTCTGATTCAGGAGGTTTTGCTTAGT | + |
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Preference number: 2 (lower is better) Translates to: KDGWGHTVKLSCNVR*VQMTKFLIQEVLLS Trigger: ACTAAGCAAAACCTCCTGAATCAGAAACTTGGTCATTTGAACCAACCTCACATTACAAGAAAGCTTGACAGTGTGTCCCCAGCCATCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR-3UTR TCA 90 bp | AAAGAATCCAGAAAACCTTTAGATCTCATTATTCCATGGCCCAGGCAGGGAGAGATTGATTTAAACGCATaGAGCTGGTTTAACTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: KESRKPLDLIIPWPRQGEIDLNA*SWFNWP Trigger: GGGCCAGTTAAACCAGCTTCATGCGTTTAAATCAAT...CTCTCCCTGCCTGGGCCATGGAATAATGAGATCTAAAGGTTTTCTGGATTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR-3UTR CCA 90 bp | AAGCTTTCTTGTAATGTGAGGTTGGTTCAAATGACCAAGTTTCTGATTCAGGAGGACTCTGGACAGAGATaGAAAACATGGCCGTGCCTA | + |
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Preference number: 2 (lower is better) Translates to: KLSCNVRLVQMTKFLIQEDSGQR*KTWPCL Trigger: TAGGCACGGCCATGTTTTCCATCTCTGTCCAGAGTC...CTCCTGAATCAGAAACTTGGTCATTTGAACCAACCTCACATTACAAGAAAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR-3UTR CCA 90 bp | AAAGAATCCAGAAAACCTTTAGATCTCATTATTCCATGGCCCAGGCAGGGAGAGCAAGTCCTTAGACTCTaGACAGAGATGGAAAACATG | + |
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Preference number: 2 (lower is better) Translates to: KESRKPLDLIIPWPRQGEQVLRL*TEMENM Trigger: CATGTTTTCCATCTCTGTCCAGAGTCTAAGGACTTG...CTCTCCCTGCCTGGGCCATGGAATAATGAGATCTAAAGGTTTTCTGGATTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR-3UTR TCA 90 bp | AAAGAATCCAGAAAACCTTTAGATCTCATTATTCCATGGCCCAGGCAGGGAGAGCACACTTTGTTACTCTaGTCGTTAACAGTGATGGAA | + |
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Preference number: 2 (lower is better) Translates to: KESRKPLDLIIPWPRQGEHTLLL*SLTVME Trigger: TTCCATCACTGTTAACGATCAGAGTAACAAAGTGTG...CTCTCCCTGCCTGGGCCATGGAATAATGAGATCTAAAGGTTTTCTGGATTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR CAA 90 bp | AATGTGAGGTTGGTTCAAATGACCAAGTTTCTGATTCAGGAGGTTTaGCTTAGTAACCCCTCTTGGTTTACAGTAGAAAATGCAGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: NVRLVQMTKFLIQEV*LSNPSWFTVENAGQ Trigger: TTGCCCTGCATTTTCTACTGTAAACCAAGAGGGGTTACTAAGCAAAACCTCCTGAATCAGAAACTTGGTCATTTGAACCAACCTCACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR-3UTR CCA 90 bp | CATTGCCAAAGAATCCAGAAAACCTTTAGATCTCATTATTCCATGGCCCAGGCATCCACTAATCCTAAATaGGGTGACCCATTTAAAATG | + |
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Preference number: 2 (lower is better) Translates to: HCQRIQKTFRSHYSMAQASTNPK*GDPFKM Trigger: CATTTTAAATGGGTCACCCCATTTAGGATTAGTGGA...TGCCTGGGCCATGGAATAATGAGATCTAAAGGTTTTCTGGATTCTTTGGCAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR GCA 72 bp | TCAACGGCAAAGGGCAGTGGGGCCCCAGAGAGCGAGTaGACAGAGCTCTGGAGCTCGGCAAAGCCCAGTATC | + |
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Preference number: 3 (lower is better) Translates to: STAKGSGAPESE*TELWSSAKPSI Trigger: GATACTGGGCTTTGCCGAGCTCCAGAGCTCTGTGCACTCGCTCTCTGGGGCCCCACTGCCCTTTGCCGTTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR CCA 72 bp | TCTTTCCCCCAGAACAGGCTCAACGGCAAAGGGCAGTaGGGCCCCAGAGAGCGAGTGCACAGAGCTCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: SFPQNRLNGKGQ*GPRERVHRALE Trigger: CTCCAGAGCTCTGTGCACTCGCTCTCTGGGGCCCCACTGCCCTTTGCCGTTGAGCCTGTTCTGGGGGAAAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR GCA 72 bp | CCAGCCCACTGGTTAGAAGGTGTCCACGGGAAGGTCTaGTGCCCACTGATGGACCAGTGGGCTGTGCTCTTT | + |
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Preference number: 3 (lower is better) Translates to: PAHWLEGVHGKV*CPLMDQWAVLF Trigger: AAAGAGCACAGCCCACTGGTCCATCAGTGGGCAGCAGACCTTCCCGTGGACACCTTCTAACCAGTGGGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR CCA 72 bp | GATGGAAAACATGGCCGTGCCTACACGCCAGCCCACTaGTTAGAAGGTGTCCACGGGAAGGTCTGCTGCCCA | + |
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Preference number: 3 (lower is better) Translates to: DGKHGRAYTPAH*LEGVHGKVCCP Trigger: TGGGCAGCAGACCTTCCCGTGGACACCTTCTAACCAGTGGGCTGGCGTGTAGGCACGGCCATGTTTTCCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| 3UTR-3UTR CAA 90 bp | CAGCCTGAAGGGAAGGATGGACGCACAGACAGCGGCCGTCAGCAGGTACAAGAGCTAACTCCAGCAGTGTaGATGCAAACAGAGCGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: QPEGKDGRTDSGRQQVQELTPAV*MQTERV Trigger: CACTCGCTCTGTTTGCATCAACACTGCTGGAGTTAG...CTCTTGTACCTGCTGACGGCCGCTGTCTGTGCGTCCATCCTTCCCTTCAGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCTGAAGGGAAGGATGGACGCACAGACAGCGGCCGTCAGCAGGTACAAGAGAGCAGTTTCCCTAATTaGGCCAGTCTACCCAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: QPEGKDGRTDSGRQQVQESSFPN*ASLPRN Trigger: GTTCCTGGGTAGACTGGCCAAATTAGGGAAACTGCT...CTCTTGTACCTGCTGACGGCCGCTGTCTGTGCGTCCATCCTTCCCTTCAGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| 3UTR GCA 72 bp | CCACTGATGGACCAGTGGGCTGTGCTCTTTACACAGTaGAGCGGTGAGGCACCAGCCAAGTCCTATCACCAA | + |
|
Preference number: 3 (lower is better) Translates to: PLMDQWAVLFTQ*SGEAPAKSYHQ Trigger: TTGGTGATAGGACTTGGCTGGTGCCTCACCGCTGCACTGTGTAAAGAGCACAGCCCACTGGTCCATCAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| 3UTR CCA 72 bp | GGCAACAGCATCAAGTCCTTAGACTCTGGACAGAGATaGAAAACATGGCCGTGCCTACACGCCAGCCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: GNSIKSLDSGQR*KTWPCLHASPL Trigger: CAGTGGGCTGGCGTGTAGGCACGGCCATGTTTTCCATCTCTGTCCAGAGTCTAAGGACTTGATGCTGTTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| 3UTR-3UTR CAA 90 bp | CCCCAGAGAGCGAGTGCACAGAGCTCTGGAGCTCGGCAAAGCCCAGTATCCAAGTCCTTGAAGGACTTCTaGCTTTGTTTTCAGCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PQRASAQSSGARQSPVSKSLKDF*LCFQLG Trigger: TCCCAGCTGAAAACAAAGCAAGAAGTCCTTCAAGGA...CTTGGATACTGGGCTTTGCCGAGCTCCAGAGCTCTGTGCACTCGCTCTCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| 3UTR GCA 72 bp | TCCTTAGACTCTGGACAGAGATGGAAAACATGGCCGTaGCTACACGCCAGCCCACTGGTTAGAAGGTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SLDSGQRWKTWP*LHASPLVRRCP Trigger: TGGACACCTTCTAACCAGTGGGCTGGCGTGTAGGCACGGCCATGTTTTCCATCTCTGTCCAGAGTCTAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| 3UTR GCA 72 bp | GGAACAGCTTGTCTAACCTCAGAGGTTGAGAGAGACTaGAGAGTCCCTTCCCCAATTCTGAAGTGGTGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: GTACLTSEVERD*RVPSPILKWWG Trigger: ACCCCACCACTTCAGAATTGGGGAAGGGACTCTGCAGTCTCTCTCAACCTCTGAGGTTAGACAAGCTGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| 3UTR CCA 72 bp | ATCAAGTCCTTAGACTCTGGACAGAGATGGAAAACATaGCCGTGCCTACACGCCAGCCCACTGGTTAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: IKSLDSGQRWKT*PCLHASPLVRR Trigger: CCTTCTAACCAGTGGGCTGGCGTGTAGGCACGGCCATGTTTTCCATCTCTGTCCAGAGTCTAAGGACTTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| 3UTR CCA 72 bp | CAGTCTCTTCGGCAACAGCATCAAGTCCTTAGACTCTaGACAGAGATGGAAAACATGGCCGTGCCTACACGC | + |
|
Preference number: 3 (lower is better) Translates to: QSLRQQHQVLRL*TEMENMAVPTR Trigger: GCGTGTAGGCACGGCCATGTTTTCCATCTCTGTCCAGAGTCTAAGGACTTGATGCTGTTGCCGAAGAGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| 3UTR CCA 72 bp | TCCAAAAGCCATTACCGTGAGGGACCTAGCAGGACATaGGTACTAACTTCTCCTCTTTCCCCCAGAACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SKSHYREGPSRT*VLTSPLSPRTG Trigger: GCCTGTTCTGGGGGAAAGAGGAGAAGTTAGTACCCATGTCCTGCTAGGTCCCTCACGGTAATGGCTTTTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| 3UTR TCA 72 bp | CATTATTCCATGGCCCAGGCAGGGAGAGTGAGTTCATaGTGGGTCTACATGACTCCATTTCTAGGTCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: HYSMAQAGRVSS*WVYMTPFLGLS Trigger: GCTCAGACCTAGAAATGGAGTCATGTAGACCCATCATGAACTCACTCTCCCTGCCTGGGCCATGGAATAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| 3UTR-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACAGGGTTTCCCTAGCTGACGTTTCCTTGAAGGACTTCTaGCTTTGTTTTCAGCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: HTHTHTHTHTHRVSLADVSLKDF*LCFQLG Trigger: TCCCAGCTGAAAACAAAGCAAGAAGTCCTTCAAGGA...AACGTCAGCTAGGGAAACCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| 3UTR GCA 72 bp | AGAGAAAATGGTACATCCGTTAAATTAGACACACATTaGTTCACACAGTGGCCCAGCCAGCACCCCAATGTC | + |
|
Preference number: 3 (lower is better) Translates to: RENGTSVKLDTH*FTQWPSQHPNV Trigger: GACATTGGGGTGCTGGCTGGGCCACTGTGTGAAGCAATGTGTGTCTAATTTAACGGATGTACCATTTTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| 3UTR-3UTR CAA 90 bp | AAGCTTTCTTGTAATGTGAGGTTGGTTCAAATGACCAAGTTTCTGATTCAGGAGGAAGGACTTCTTGCTTaGTTTTCAGCTGGGAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: KLSCNVRLVQMTKFLIQEEGLLA*FSAGKM Trigger: CATCTTCCCAGCTGAAAACAAAGCAAGAAGTCCTTC...CTCCTGAATCAGAAACTTGGTCATTTGAACCAACCTCACATTACAAGAAAGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR CCA 90 bp | GGGCCCAGACCAGCACCACACTGCCTCCAGGCAGAAGGGGACAGTCCCTCTCCCCATGCCGGAAGCTGGTaGACAGCTCCTGCAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GPRPAPHCLQAEGDSPSPHAGSW*TAPAGP Trigger: AGGCCCTGCAGGAGCTGTCCACCAGCTTCCGGCATG...GGGAGAGGGACTGTCCCCTTCTGCCTGGAGGCAGTGTGGTGCTGGTCTGGGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR TCA 90 bp | GGGCCCAGACCAGCACCACACTGCCTCCAGGCAGAAGGGGACAGTCCCTCTCCCGGGCTGGAGGTGGTGTaGCTACTCACTTGCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GPRPAPHCLQAEGDSPSPGLEVV*LLTCSA Trigger: AGCCGAGCAAGTGAGTAGTCACACCACCTCCAGCCC...GGGAGAGGGACTGTCCCCTTCTGCCTGGAGGCAGTGTGGTGCTGGTCTGGGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR GCA 90 bp | GTCTGCTGCCCACTGATGGACCAGTGGGCTGTGCTCTTTACACAGTGCAGCGGTCGGCTGGGCAGGGCCTaGACAGCACGCTGGCACCTA | + |
|
Preference number: 4 (lower is better) Translates to: VCCPLMDQWAVLFTQCSGRLGRA*TARWHL Trigger: TAGGTGCCAGCGTGCTGTGCAGGCCCTGCCCAGCCG...ACCGCTGCACTGTGTAAAGAGCACAGCCCACTGGTCCATCAGTGGGCAGCAGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR CCA 90 bp | CCCCAGAGAGCGAGTGCACAGAGCTCTGGAGCTCGGCAAAGCCCAGTATCCAAGGTGCATGCCGGAAGCTaGTGGACAGCTCCTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PQRASAQSSGARQSPVSKVHAGS*WTAPAG Trigger: CCCTGCAGGAGCTGTCCACCAGCTTCCGGCATGCAC...CTTGGATACTGGGCTTTGCCGAGCTCCAGAGCTCTGTGCACTCGCTCTCTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR CCA 90 bp | CCCCAGAGAGCGAGTGCACAGAGCTCTGGAGCTCGGCAAAGCCCAGTATCCAAGCGCCATCCACCCACTTaGGAGGCGACCGCTTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PQRASAQSSGARQSPVSKRHPPT*EATALS Trigger: TGACAAAGCGGTCGCCTCCCAAGTGGGTGGATGGCG...CTTGGATACTGGGCTTTGCCGAGCTCCAGAGCTCTGTGCACTCGCTCTCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR TCA 90 bp | CCCCAGAGAGCGAGTGCACAGAGCTCTGGAGCTCGGCAAAGCCCAGTATCCAAGCGCAGCAATGCTACGTaGATGCAGAGGGCTGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PQRASAQSSGARQSPVSKRSNAT*MQRAGG Trigger: ACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCG...CTTGGATACTGGGCTTTGCCGAGCTCCAGAGCTCTGTGCACTCGCTCTCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR GCA 90 bp | ACACATTGCTTCACACAGTGGCCCAGCCAGCACCCCAATGTCCCTCCACCCCCACCAGCTCCGCAGCAATaGTACGTGAATGCAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: THCFTQWPSQHPNVPPPPPAPQQ*YVNAEG Trigger: GCCCTCTGCATTCACGTAGCATTGCTGCGGAGCTGG...TGGGGGTGGAGGGACATTGGGGTGCTGGCTGGGCCACTGTGTGAAGCAATGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087908.10 |
||
| CDS-3UTR CCA 90 bp | GTCTGCTGCCCACTGATGGACCAGTGGGCTGTGCTCTTTACACAGTGCAGCGGTCGCCATCCACCCACTTaGGAGGCGACCGCTTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VCCPLMDQWAVLFTQCSGRHPPT*EATALS Trigger: TGACAAAGCGGTCGCCTCCCAAGTGGGTGGATGGCG...ACCGCTGCACTGTGTAAAGAGCACAGCCCACTGGTCCATCAGTGGGCAGCAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR GCA 90 bp | CCCCAGAGAGCGAGTGCACAGAGCTCTGGAGCTCGGCAAAGCCCAGTATCCAAGGCAATGCTACGTGAATaGAGAGGGCTGGAGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PQRASAQSSGARQSPVSKAMLRE*RGLEVV Trigger: CACCACCTCCAGCCCTCTGCATTCACGTAGCATTGC...CTTGGATACTGGGCTTTGCCGAGCTCCAGAGCTCTGTGCACTCGCTCTCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR GCA 90 bp | CCCCAGAGAGCGAGTGCACAGAGCTCTGGAGCTCGGCAAAGCCCAGTATCCAAGCATGTTCCTCCTCACTaGTGTCATCCAGGGTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PQRASAQSSGARQSPVSKHVPPH*CHPGWV Trigger: GACCCACCCTGGATGACAGCAGTGAGGAGGAACATG...CTTGGATACTGGGCTTTGCCGAGCTCCAGAGCTCTGTGCACTCGCTCTCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR GCA 90 bp | CCCCAGAGAGCGAGTGCACAGAGCTCTGGAGCTCGGCAAAGCCCAGTATCCAAGCTGATACCAGCGCCATaGGGTCATCAGCAAGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PQRASAQSSGARQSPVSKLIPAP*GHQQAR Trigger: ACGAGCTTGCTGATGACCGCATGGCGCTGGTATCAG...CTTGGATACTGGGCTTTGCCGAGCTCCAGAGCTCTGTGCACTCGCTCTCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087908.10 |
||
| CDS-3UTR CCA 90 bp | CAGCCTGAAGGGAAGGATGGACGCACAGACAGCGGCCGTCAGCAGGTACAAGAGGCAGAGGGCTGGAGGTaGTGTGACTACTCACTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QPEGKDGRTDSGRQQVQEAEGWR*CDYSLA Trigger: AGCAAGTGAGTAGTCACACCACCTCCAGCCCTCTGC...CTCTTGTACCTGCTGACGGCCGCTGTCTGTGCGTCCATCCTTCCCTTCAGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR TCA 90 bp | GGGCCCAGACCAGCACCACACTGCCTCCAGGCAGAAGGGGACAGTCCCTCTCCCTTCAAATGCTTATCATaGAGGCTGGCTAACTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GPRPAPHCLQAEGDSPSPFKCLS*RLANSF Trigger: GAAGGAGTTAGCCAGCCTTCATGATAAGCATTTGAA...GGGAGAGGGACTGTCCCCTTCTGCCTGGAGGCAGTGTGGTGCTGGTCTGGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR GCA 90 bp | GTCTGCTGCCCACTGATGGACCAGTGGGCTGTGCTCTTTACACAGTGCAGCGGTGCAATGCTACGTGAATaGAGAGGGCTGGAGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VCCPLMDQWAVLFTQCSGAMLRE*RGLEVV Trigger: CACCACCTCCAGCCCTCTGCATTCACGTAGCATTGC...ACCGCTGCACTGTGTAAAGAGCACAGCCCACTGGTCCATCAGTGGGCAGCAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR CCA 90 bp | CCAATTCTGAAGTGGTGGGGTGGGTGCTGCCTCCTCTTTTCTAAGCCTCTCTACCATGCCGGAAGCTGGTaGACAGCTCCTGCAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PILKWWGGCCLLFSKPLYHAGSW*TAPAGP Trigger: AGGCCCTGCAGGAGCTGTCCACCAGCTTCCGGCATG...GTAGAGAGGCTTAGAAAAGAGGAGGCAGCACCCACCCCACCACTTCAGAATTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR CCA 90 bp | CCAATTCTGAAGTGGTGGGGTGGGTGCTGCCTCCTCTTTTCTAAGCCTCTCTACGTGCATGCCGGAAGCTaGTGGACAGCTCCTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PILKWWGGCCLLFSKPLYVHAGS*WTAPAG Trigger: CCCTGCAGGAGCTGTCCACCAGCTTCCGGCATGCAC...GTAGAGAGGCTTAGAAAAGAGGAGGCAGCACCCACCCCACCACTTCAGAATTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR TCA 90 bp | ACACATTGCTTCACACAGTGGCCCAGCCAGCACCCCAATGTCCCTCCACCCCCATCATCCGTGAAGCCCTaGCCATACAGAGTAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: THCFTQWPSQHPNVPPPPSSVKP*PYRVAS Trigger: TGATGCTACTCTGTATGGTCAGGGCTTCACGGATGA...TGGGGGTGGAGGGACATTGGGGTGCTGGCTGGGCCACTGTGTGAAGCAATGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| 3UTR CAA 72 bp | CAGGCAGAAGGGGACAGTCCCTCTCCCCATAGGTCCTaGGGACAGTTTCTAACCAGATGGATGGATTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QAEGDSPSPHRS*GQFLTRWMDWG Trigger: CCCCCAATCCATCCATCTGGTTAGAAACTGTCCCAAGGACCTATGGGGAGAGGGACTGTCCCCTTCTGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR TCA 90 bp | CCAATTCTGAAGTGGTGGGGTGGGTGCTGCCTCCTCTTTTCTAAGCCTCTCTACCGCAGCAATGCTACGTaGATGCAGAGGGCTGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PILKWWGGCCLLFSKPLYRSNAT*MQRAGG Trigger: ACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCG...GTAGAGAGGCTTAGAAAAGAGGAGGCAGCACCCACCCCACCACTTCAGAATTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR CCA 90 bp | CCCCAGAGAGCGAGTGCACAGAGCTCTGGAGCTCGGCAAAGCCCAGTATCCAAGGCTGCCGGGTTTGGATaGAATTATTCCGCAACAACA | + |
|
Preference number: 4 (lower is better) Translates to: PQRASAQSSGARQSPVSKAAGFG*NYSATT Trigger: TGTTGTTGCGGAATAATTCCATCCAAACCCGGCAGC...CTTGGATACTGGGCTTTGCCGAGCTCCAGAGCTCTGTGCACTCGCTCTCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR GCA 90 bp | CCAATTCTGAAGTGGTGGGGTGGGTGCTGCCTCCTCTTTTCTAAGCCTCTCTACCAGGTAGTCAGACTGTaGATGCCGGAAGCTGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PILKWWGGCCLLFSKPLYQVVRL*MPEAGG Trigger: TCCACCAGCTTCCGGCATGCACAGTCTGACTACCTG...GTAGAGAGGCTTAGAAAAGAGGAGGCAGCACCCACCCCACCACTTCAGAATTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR GCA 90 bp | CCCCAGAGAGCGAGTGCACAGAGCTCTGGAGCTCGGCAAAGCCCAGTATCCAAGCCTCTCGGTTTTTCATaGGTTTCAGGTAGTCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: PQRASAQSSGARQSPVSKPLGFS*VSGSQT Trigger: AGTCTGACTACCTGAAACGCATGAAAAACCGAGAGG...CTTGGATACTGGGCTTTGCCGAGCTCCAGAGCTCTGTGCACTCGCTCTCTGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR GCA 90 bp | CAGCCTGAAGGGAAGGATGGACGCACAGACAGCGGCCGTCAGCAGGTACAAGAGCCTCTCGGTTTTTCATaGGTTTCAGGTAGTCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: QPEGKDGRTDSGRQQVQEPLGFS*VSGSQT Trigger: AGTCTGACTACCTGAAACGCATGAAAAACCGAGAGG...CTCTTGTACCTGCTGACGGCCGCTGTCTGTGCGTCCATCCTTCCCTTCAGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR CCA 90 bp | GTCTGCTGCCCACTGATGGACCAGTGGGCTGTGCTCTTTACACAGTGCAGCGGTGCTGCCGGGTTTGGATaGAATTATTCCGCAACAACA | + |
|
Preference number: 4 (lower is better) Translates to: VCCPLMDQWAVLFTQCSGAAGFG*NYSATT Trigger: TGTTGTTGCGGAATAATTCCATCCAAACCCGGCAGC...ACCGCTGCACTGTGTAAAGAGCACAGCCCACTGGTCCATCAGTGGGCAGCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR CCA 90 bp | CAGCCTGAAGGGAAGGATGGACGCACAGACAGCGGCCGTCAGCAGGTACAAGAGTGCTGTCATCCAGGGTaGGTCTGTTCAAATGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: QPEGKDGRTDSGRQQVQECCHPG*VCSNAY Trigger: ATAAGCATTTGAACAGACCCACCCTGGATGACAGCA...CTCTTGTACCTGCTGACGGCCGCTGTCTGTGCGTCCATCCTTCCCTTCAGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR CCA 90 bp | CCAATTCTGAAGTGGTGGGGTGGGTGCTGCCTCCTCTTTTCTAAGCCTCTCTACGCACGCTGGCACCTATaGAAGAGCTGTGTGACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PILKWWGGCCLLFSKPLYARWHL*KSCVTS Trigger: GGAAGTCACACAGCTCTTCCATAGGTGCCAGCGTGC...GTAGAGAGGCTTAGAAAAGAGGAGGCAGCACCCACCCCACCACTTCAGAATTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR CCA 90 bp | CCAATTCTGAAGTGGTGGGGTGGGTGCTGCCTCCTCTTTTCTAAGCCTCTCTACGTGAATGCAGAGGGCTaGAGGTGGTGTGACTACTCA | + |
|
Preference number: 4 (lower is better) Translates to: PILKWWGGCCLLFSKPLYVNAEG*RWCDYS Trigger: TGAGTAGTCACACCACCTCCAGCCCTCTGCATTCAC...GTAGAGAGGCTTAGAAAAGAGGAGGCAGCACCCACCCCACCACTTCAGAATTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR GCA 90 bp | AAAGAATCCAGAAAACCTTTAGATCTCATTATTCCATGGCCCAGGCAGGGAGAGCTCCTGCAGGGCCTGTaGCAAGGAGGCCACCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: KESRKPLDLIIPWPRQGELLQGL*QGGHHV Trigger: AACGTGGTGGCCTCCTTGGCACAGGCCCTGCAGGAG...CTCTCCCTGCCTGGGCCATGGAATAATGAGATCTAAAGGTTTTCTGGATTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR GCA 90 bp | GGGAAGATGAAGAGGCACTGCCTCTACACTCATAAATTTTTGGTACCAAACTTCCTCCTGCAGGGCCTGTaGCAAGGAGGCCACCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: GKMKRHCLYTHKFLVPNFLLQGL*QGGHHV Trigger: AACGTGGTGGCCTCCTTGGCACAGGCCCTGCAGGAG...GAAGTTTGGTACCAAAAATTTATGAGTGTAGAGGCAGTGCCTCTTCATCTTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR CCA 90 bp | CCAATTCTGAAGTGGTGGGGTGGGTGCTGCCTCCTCTTTTCTAAGCCTCTCTACAACAGCTGCCGGGTTTaGATGGAATTATTCCGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PILKWWGGCCLLFSKPLYNSCRV*MELFRN Trigger: GTTGCGGAATAATTCCATCCAAACCCGGCAGCTGTT...GTAGAGAGGCTTAGAAAAGAGGAGGCAGCACCCACCCCACCACTTCAGAATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR TCA 90 bp | CATTGCCAAAGAATCCAGAAAACCTTTAGATCTCATTATTCCATGGCCCAGGCAGGGCTGGAGGTGGTGTaGCTACTCACTTGCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HCQRIQKTFRSHYSMAQAGLEVV*LLTCSA Trigger: AGCCGAGCAAGTGAGTAGTCACACCACCTCCAGCCC...TGCCTGGGCCATGGAATAATGAGATCTAAAGGTTTTCTGGATTCTTTGGCAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR GCA 90 bp | TTCGGCAACAGCATCAAGTCCTTAGACTCTGGACAGAGATGGAAAACATGGCCGTGCTCGGCTAACAGCTaGCGGGTTTGGATGGAATTA | + |
|
Preference number: 4 (lower is better) Translates to: FGNSIKSLDSGQRWKTWPCSANS*RVWMEL Trigger: TAATTCCATCCAAACCCGGCAGCTGTTAGCCGAGCA...CGGCCATGTTTTCCATCTCTGTCCAGAGTCTAAGGACTTGATGCTGTTGCCGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR GCA 90 bp | AGGCACTGCCTCTACACTCATAAATTTTTGGTACCAAACTTCTTAAAAACCAGACGGCTGGGCAGGGCCTaGACAGCACGCTGGCACCTA | + |
|
Preference number: 4 (lower is better) Translates to: RHCLYTHKFLVPNFLKTRRLGRA*TARWHL Trigger: TAGGTGCCAGCGTGCTGTGCAGGCCCTGCCCAGCCG...TCTGGTTTTTAAGAAGTTTGGTACCAAAAATTTATGAGTGTAGAGGCAGTGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR GCA 90 bp | AAAGAATCCAGAAAACCTTTAGATCTCATTATTCCATGGCCCAGGCAGGGAGAGCAGGTAGTCAGACTGTaGATGCCGGAAGCTGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KESRKPLDLIIPWPRQGEQVVRL*MPEAGG Trigger: TCCACCAGCTTCCGGCATGCACAGTCTGACTACCTG...CTCTCCCTGCCTGGGCCATGGAATAATGAGATCTAAAGGTTTTCTGGATTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR GCA 90 bp | AAAGAATCCAGAAAACCTTTAGATCTCATTATTCCATGGCCCAGGCAGGGAGAGCTGATACCAGCGCCATaGGGTCATCAGCAAGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KESRKPLDLIIPWPRQGELIPAP*GHQQVL Trigger: CAGAACTTGCTGATGACCGCATGGCGCTGGTATCAG...CTCTCCCTGCCTGGGCCATGGAATAATGAGATCTAAAGGTTTTCTGGATTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044638.13 |
||
| CDS-3UTR GCA 90 bp | GGGAAGATGAAGAGGCACTGCCTCTACACTCATAAATTTTTGGTACCAAACTTCCATGTTCCTCCTCACTaGTGTCATCCAGGGTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GKMKRHCLYTHKFLVPNFHVPPH*CHPGWV Trigger: GACCCACCCTGGATGACAGCAGTGAGGAGGAACATG...GAAGTTTGGTACCAAAAATTTATGAGTGTAGAGGCAGTGCCTCTTCATCTTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR CCA 90 bp | GGGAAGATGAAGAGGCACTGCCTCTACACTCATAAATTTTTGGTACCAAACTTCGCAGAGGGCTGGAGGTaGTGTGACTACTCACTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GKMKRHCLYTHKFLVPNFAEGWR*CDYSLA Trigger: AGCAAGTGAGTAGTCACACCACCTCCAGCCCTCTGC...GAAGTTTGGTACCAAAAATTTATGAGTGTAGAGGCAGTGCCTCTTCATCTTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR CCA 90 bp | TTCGGCAACAGCATCAAGTCCTTAGACTCTGGACAGAGATGGAAAACATGGCCGTGCTGTCATCCAGGGTaGGTCTGTTCAAATGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: FGNSIKSLDSGQRWKTWPCCHPG*VCSNAY Trigger: ATAAGCATTTGAACAGACCCACCCTGGATGACAGCA...CGGCCATGTTTTCCATCTCTGTCCAGAGTCTAAGGACTTGATGCTGTTGCCGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR TCA 90 bp | AAGCTTTCTTGTAATGTGAGGTTGGTTCAAATGACCAAGTTTCTGATTCAGGAGCTTCTGGATCTAGGCTaGTGCCTGATACCAGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLSCNVRLVQMTKFLIQELLDLG*CLIPAP Trigger: TGGCGCTGGTATCAGGCATCAGCCTAGATCCAGAAG...CTCCTGAATCAGAAACTTGGTCATTTGAACCAACCTCACATTACAAGAAAGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR GCA 90 bp | AAGCTTTCTTGTAATGTGAGGTTGGTTCAAATGACCAAGTTTCTGATTCAGGAGCACACTCCGCAGCAATaGTACGTGAATGCAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLSCNVRLVQMTKFLIQEHTPQQ*YVNAEG Trigger: GCCCTCTGCATTCACGTAGCATTGCTGCGGAGTGTG...CTCCTGAATCAGAAACTTGGTCATTTGAACCAACCTCACATTACAAGAAAGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044638.13 |
||
| CDS-3UTR CCA 90 bp | AAGCTTTCTTGTAATGTGAGGTTGGTTCAAATGACCAAGTTTCTGATTCAGGAGGCACGCTGGCACCTATaGAAGAGCTGTGTGACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KLSCNVRLVQMTKFLIQEARWHL*KSCVTS Trigger: GGAAGTCACACAGCTCTTCCATAGGTGCCAGCGTGC...CTCCTGAATCAGAAACTTGGTCATTTGAACCAACCTCACATTACAAGAAAGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR TCA 90 bp | GGGAAGATGAAGAGGCACTGCCTCTACACTCATAAATTTTTGGTACCAAACTTCAGCCATCTTCGGTCTTaGCACAGGACTGTTCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: GKMKRHCLYTHKFLVPNFSHLRS*HRTVQH Trigger: ATGTTGAACAGTCCTGTGTCAAGACCGAAGATGGCT...GAAGTTTGGTACCAAAAATTTATGAGTGTAGAGGCAGTGCCTCTTCATCTTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| 3UTR CAA 72 bp | AACAGTTATACAACAATCACTCTAACTCCAGCAGTGTaGATGCAAACAGAGCGAGTGAGATACGCACGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NSYTTITLTPAV*MQTERVRYARS Trigger: AGAGCGTGCGTATCTCACTCGCTCTGTTTGCATCAACACTGCTGGAGTTAGAGTGATTGTTGTATAACTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR TCA 90 bp | AAGCTTTCTTGTAATGTGAGGTTGGTTCAAATGACCAAGTTTCTGATTCAGGAGTCATCCGTGAAGCCCTaGCCATACAGAGTAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: KLSCNVRLVQMTKFLIQESSVKP*PYRVAS Trigger: TGATGCTACTCTGTATGGTCAGGGCTTCACGGATGA...CTCCTGAATCAGAAACTTGGTCATTTGAACCAACCTCACATTACAAGAAAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR CCA 90 bp | AGGCACTGCCTCTACACTCATAAATTTTTGGTACCAAACTTCTTAAAAACCAGAGTGAATGCAGAGGGCTaGAGGTGGTGTGACTACTCA | + |
|
Preference number: 4 (lower is better) Translates to: RHCLYTHKFLVPNFLKTRVNAEG*RWCDYS Trigger: TGAGTAGTCACACCACCTCCAGCCCTCTGCATTCAC...TCTGGTTTTTAAGAAGTTTGGTACCAAAAATTTATGAGTGTAGAGGCAGTGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR CCA 90 bp | CATTGCCAAAGAATCCAGAAAACCTTTAGATCTCATTATTCCATGGCCCAGGCAGCTTATCATGAAGGCTaGCTAACTCCTTCATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HCQRIQKTFRSHYSMAQAAYHEG*LTPSSS Trigger: AGAAGATGAAGGAGTTAGCCAGCCTTCATGATAAGC...TGCCTGGGCCATGGAATAATGAGATCTAAAGGTTTTCTGGATTCTTTGGCAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR CCA 90 bp | AAGCTTTCTTGTAATGTGAGGTTGGTTCAAATGACCAAGTTTCTGATTCAGGAGGCTTATCATGAAGGCTaGCTAACTCCTTCATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KLSCNVRLVQMTKFLIQEAYHEG*LTPSSS Trigger: AGAAGATGAAGGAGTTAGCCAGCCTTCATGATAAGC...CTCCTGAATCAGAAACTTGGTCATTTGAACCAACCTCACATTACAAGAAAGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR TCA 90 bp | AGGCACTGCCTCTACACTCATAAATTTTTGGTACCAAACTTCTTAAAAACCAGATTCAAATGCTTATCATaGAGGCTGGCTAACTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RHCLYTHKFLVPNFLKTRFKCLS*RLANSF Trigger: GAAGGAGTTAGCCAGCCTTCATGATAAGCATTTGAA...TCTGGTTTTTAAGAAGTTTGGTACCAAAAATTTATGAGTGTAGAGGCAGTGCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| 3UTR CAA 72 bp | TTGGTTCAAATGACCAAGTTTCTGATTCAGGAGGTTTaGCTTAGTAACCCCTCTTGGTTTACAGTAGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LVQMTKFLIQEV*LSNPSWFTVEN Trigger: ATTTTCTACTGTAAACCAAGAGGGGTTACTAAGCAAAACCTCCTGAATCAGAAACTTGGTCATTTGAACCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS GCA 90 bp | TCTTCCTGCTCCGAGCAGGCCCTTCGTGCCCGGCTGGGCAGGGCCTaGACAGCACGCTGGCACCTATGGAAGAGCTGTGTGACTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSCSEQALRARLGRA*TARWHLWKSCVTSW Trigger: CCAGGAAGTCACACAGCTCTTCCATAGGTGCCAGCGTGCTGTGCAGGCCCTGCCCAGCCGGGCACGAAGGGCCTGCTCGGAGCAGGAAGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 ENSMUST00000147038.8 ENSMUST00000156054.2 |
||
| CDS CCA 90 bp | CAAGCTCGTCCAGCTCCGCAGCAATGCTACGTGAATGCAGAGGGCTaGAGGTGGTGTGACTACTCACTTGCTCGGCTAACAGCTGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: QARPAPQQCYVNAEG*RWCDYSLARLTAAG Trigger: CCCGGCAGCTGTTAGCCGAGCAAGTGAGTAGTCACACCACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCGGAGCTGGACGAGCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087908.10 ENSMUST00000156054.2 |
||
| CDS TCA 90 bp | CATGCGGTCATCAGCAAGCTCGTCCAGCTCCGCAGCAATGCTACGTaGATGCAGAGGGCTGGAGGTGGTGTGACTACTCACTTGCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: HAVISKLVQLRSNAT*MQRAGGGVTTHLLG Trigger: GCCGAGCAAGTGAGTAGTCACACCACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCGGAGCTGGACGAGCTTGCTGATGACCGCATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087908.10 ENSMUST00000156054.2 |
||
| CDS CCA 90 bp | CGTCCAGCTCCGCAGCAATGCTACGTGAATGCAGAGGGCTGGAGGTaGTGTGACTACTCACTTGCTCGGCTAACAGCTGCCGGGTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RPAPQQCYVNAEGWR*CDYSLARLTAAGFG Trigger: TCCAAACCCGGCAGCTGTTAGCCGAGCAAGTGAGTAGTCACACCACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCGGAGCTGGACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087908.10 ENSMUST00000156054.2 |
||
| CDS TCA 90 bp | GAGGCGACCGCTTTGTCACGCCAATTGCTGCTTCTGGATCTAGGCTaGTGCCTGATACCAGCGCCATGCGGTCATCAGCAAGCTCGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: EATALSRQLLLLDLG*CLIPAPCGHQQARP Trigger: TGGACGAGCTTGCTGATGACCGCATGGCGCTGGTATCAGGCATCAGCCTAGATCCAGAAGCAGCAATTGGCGTGACAAAGCGGTCGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087908.10 ENSMUST00000156054.2 |
||
| CDS-3UTR CAA 90 bp | CCCCAGAGAGCGAGTGCACAGAGCTCTGGAGCTCGGCAAAGCCCAGTATCCAAGGCTTTGTCACGCCAATaGCTGCTTCTGGATCTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PQRASAQSSGARQSPVSKALSRQ*LLLDLG Trigger: GCCTAGATCCAGAAGCAGCAATTGGCGTGACAAAGC...CTTGGATACTGGGCTTTGCCGAGCTCCAGAGCTCTGTGCACTCGCTCTCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS GCA 90 bp | CGATCTCTCCTCTCGGTTTTTCATGCGTTTCAGGTAGTCAGACTGTaGATGCCGGAAGCTGGTGGACAGCTCCTGCAGGGCCTGTGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: RSLLSVFHAFQVVRL*MPEAGGQLLQGLCQ Trigger: TTGGCACAGGCCCTGCAGGAGCTGTCCACCAGCTTCCGGCATGCACAGTCTGACTACCTGAAACGCATGAAAAACCGAGAGGAGAGATCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 ENSMUST00000147038.8 ENSMUST00000156054.2 |
||
| CDS CCA 90 bp | GTTCTGTATCACACTCCGCAGCAATGCTACGTGAATGCAGAGGGCTaGAGGTGGTGTGACTACTCACTTGCTCGGCTAACAGCTGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: VLYHTPQQCYVNAEG*RWCDYSLARLTAAG Trigger: CCCGGCAGCTGTTAGCCGAGCAAGTGAGTAGTCACACCACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCGGAGTGTGATACAGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044638.13 |
||
| CDS TCA 90 bp | GCGGTCATCAGCAAGTTCTGTATCACACTCCGCAGCAATGCTACGTaGATGCAGAGGGCTGGAGGTGGTGTGACTACTCACTTGCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: AVISKFCITLRSNAT*MQRAGGGVTTHLLG Trigger: GCCGAGCAAGTGAGTAGTCACACCACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCGGAGTGTGATACAGAACTTGCTGATGACCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044638.13 |
||
| CDS CCA 90 bp | TATCACACTCCGCAGCAATGCTACGTGAATGCAGAGGGCTGGAGGTaGTGTGACTACTCACTTGCTCGGCTAACAGCTGCCGGGTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: YHTPQQCYVNAEGWR*CDYSLARLTAAGFG Trigger: TCCAAACCCGGCAGCTGTTAGCCGAGCAAGTGAGTAGTCACACCACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCGGAGTGTGATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044638.13 |
||
| CDS-3UTR CAA 90 bp | TTCGGCAACAGCATCAAGTCCTTAGACTCTGGACAGAGATGGAAAACATGGCCGACGCCATCCACCCACTaGGGAGGCGACCGCTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: FGNSIKSLDSGQRWKTWPTPSTH*GGDRFV Trigger: GACAAAGCGGTCGCCTCCCAAGTGGGTGGATGGCGT...CGGCCATGTTTTCCATCTCTGTCCAGAGTCTAAGGACTTGATGCTGTTGCCGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS TCA 90 bp | GAGGCGACCGCTTTGTCACGCCAATTGCTGCTTCTGGATCTAGGCTaGTGCCTGATACCAGCGCCATGCGGTCATCAGCAAGTTCTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: EATALSRQLLLLDLG*CLIPAPCGHQQVLY Trigger: ATACAGAACTTGCTGATGACCGCATGGCGCTGGTATCAGGCATCAGCCTAGATCCAGAAGCAGCAATTGGCGTGACAAAGCGGTCGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044638.13 |
||
| CDS GCA 90 bp | GCGCCATGCGGTCATCAGCAAGTTCTGTATCACACTCCGCAGCAATaGTACGTGAATGCAGAGGGCTGGAGGTGGTGTGACTACTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: APCGHQQVLYHTPQQ*YVNAEGWRWCDYSL Trigger: AAGTGAGTAGTCACACCACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCGGAGTGTGATACAGAACTTGCTGATGACCGCATGGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044638.13 |
||
| CDS CCA 90 bp | TGCGGCCAACATCATACTGTATTTCGTCCACGCCATCCACCCACTTaGGAGGCGACCGCTTTGTCACGCCAATTGCTGCTTCTGGATCTA | + |
|
Preference number: 5 (lower is better) Translates to: CGQHHTVFRPRHPPT*EATALSRQLLLLDL Trigger: TAGATCCAGAAGCAGCAATTGGCGTGACAAAGCGGTCGCCTCCCAAGTGGGTGGATGGCGTGGACGAAATACAGTATGATGTTGGCCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 ENSMUST00000147038.8 ENSMUST00000155000.8 ENSMUST00000156054.2 |
||
| CDS-3UTR CAA 90 bp | CCCCAGAGAGCGAGTGCACAGAGCTCTGGAGCTCGGCAAAGCCCAGTATCCAAGTCCCTGAAGATTTCATaGAGGTCTGAAATGGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: PQRASAQSSGARQSPVSKSLKIS*RSEMDC Trigger: GCAGTCCATTTCAGACCTCAATGAAATCTTCAGGGA...CTTGGATACTGGGCTTTGCCGAGCTCCAGAGCTCTGTGCACTCGCTCTCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS GCA 90 bp | CTGGGGTGTCGAAGAAATGCTGCGATCTCTCCTCTCGGTTTTTCATaGGTTTCAGGTAGTCAGACTGTGCATGCCGGAAGCTGGTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: LGCRRNAAISPLGFS*VSGSQTVHAGSWWT Trigger: TGTCCACCAGCTTCCGGCATGCACAGTCTGACTACCTGAAACGCATGAAAAACCGAGAGGAGAGATCGCAGCATTTCTTCGACACCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 ENSMUST00000147038.8 ENSMUST00000156054.2 |
||
| CDS-3UTR CAA 90 bp | GTCTGCTGCCCACTGATGGACCAGTGGGCTGTGCTCTTTACACAGTGCAGCGGTTCCCTGAAGATTTCATaGAGGTCTGAAATGGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: VCCPLMDQWAVLFTQCSGSLKIS*RSEMDC Trigger: GCAGTCCATTTCAGACCTCAATGAAATCTTCAGGGA...ACCGCTGCACTGTGTAAAGAGCACAGCCCACTGGTCCATCAGTGGGCAGCAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACAGGGTTTCCCTAGCTGACGTTGCTTTGTCACGCCAATaGCTGCTTCTGGATCTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHRVSLADVALSRQ*LLLDLG Trigger: GCCTAGATCCAGAAGCAGCAATTGGCGTGACAAAGC...AACGTCAGCTAGGGAAACCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS TCA 90 bp | CTCCACAATCATGGCTCCCAAGTCCCTGAAGATTTCATTGAGGTCTaGAATGGACTGCACAATCTGACGGATCTCTCGCTCCCTCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LHNHGSQVPEDFIEV*NGLHNLTDLSLPLL Trigger: GAGGAGAGGGAGCGAGAGATCCGTCAGATTGTGCAGTCCATTTCAGACCTCAATGAAATCTTCAGGGACTTGGGAGCCATGATTGTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS CCA 90 bp | TGGTGTGACTACTCACTTGCTCGGCTAACAGCTGCCGGGTTTGGATaGAATTATTCCGCAACAACAAGAAAGCGTCGGTTAAACGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: WCDYSLARLTAAGFG*NYSATTRKRRLNAW Trigger: CCAGGCGTTTAACCGACGCTTTCTTGTTGTTGCGGAATAATTCCATCCAAACCCGGCAGCTGTTAGCCGAGCAAGTGAGTAGTCACACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR CAA 90 bp | CCAATTCTGAAGTGGTGGGGTGGGTGCTGCCTCCTCTTTTCTAAGCCTCTCTACAAGCCATCTTCGGTCTaGACACAGGACTGTTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: PILKWWGGCCLLFSKPLYKPSSV*TQDCST Trigger: TGTTGAACAGTCCTGTGTCAAGACCGAAGATGGCTT...GTAGAGAGGCTTAGAAAAGAGGAGGCAGCACCCACCCCACCACTTCAGAATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS CCA 90 bp | TGGTGTGACTACTCACTTGCTCGGCTAACAGCTGCCGGGTTTGGATaGAATTATTCCGCAACAACAAGAAAGCGTCGGTTAAACGCCTGN | + |
|
Preference number: 5 (lower is better) Translates to: WCDYSLARLTAAGFG*NYSATTRKRRLNAX Trigger: NCAGGCGTTTAACCGACGCTTTCTTGTTGTTGCGGAATAATTCCATCCAAACCCGGCAGCTGTTAGCCGAGCAAGTGAGTAGTCACACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156054.2 |
||
| CDS TCA 90 bp | AGTGTGTTTTGCTCTACCAGCACCAGCTGGTCATCCGTGAAGCCCTaGCCATACAGAGTAGCATCATCTCCATCATCCATTAGTGGTACT | + |
|
Preference number: 5 (lower is better) Translates to: SVFCSTSTSWSSVKP*PYRVASSPSSISGT Trigger: AGTACCACTAATGGATGATGGAGATGATGCTACTCTGTATGGTCAGGGCTTCACGGATGACCAGCTGGTGCTGGTAGAGCAAAACACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR CAA 90 bp | AGGCACTGCCTCTACACTCATAAATTTTTGGTACCAAACTTCTTAAAAACCAGAACGCCATCCACCCACTaGGGAGGCGACCGCTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RHCLYTHKFLVPNFLKTRTPSTH*GGDRFV Trigger: GACAAAGCGGTCGCCTCCCAAGTGGGTGGATGGCGT...TCTGGTTTTTAAGAAGTTTGGTACCAAAAATTTATGAGTGTAGAGGCAGTGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR CAA 90 bp | GGGAAGATGAAGAGGCACTGCCTCTACACTCATAAATTTTTGGTACCAAACTTCCACCATCAGTGTGTTTaGCTCTACCAGCACCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GKMKRHCLYTHKFLVPNFHHQCV*LYQHQL Trigger: CAGCTGGTGCTGGTAGAGCAAAACACACTGATGGTG...GAAGTTTGGTACCAAAAATTTATGAGTGTAGAGGCAGTGCCTCTTCATCTTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
||
| CDS-3UTR CAA 90 bp | AGGCACTGCCTCTACACTCATAAATTTTTGGTACCAAACTTCTTAAAAACCAGAAAGCCATCTTCGGTCTaGACACAGGACTGTTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: RHCLYTHKFLVPNFLKTRKPSSV*TQDCST Trigger: TGTTGAACAGTCCTGTGTCAAGACCGAAGATGGCTT...TCTGGTTTTTAAGAAGTTTGGTACCAAAAATTTATGAGTGTAGAGGCAGTGCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| CDS GCA 72 bp | TCCGAGCAGGCCCTTCGTGCCCGGCTGGGCAGGGCCTaGACAGCACGCTGGCACCTATGGAAGAGCTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: SEQALRARLGRA*TARWHLWKSCV Trigger: CACACAGCTCTTCCATAGGTGCCAGCGTGCTGTGCAGGCCCTGCCCAGCCGGGCACGAAGGGCCTGCTCGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 ENSMUST00000147038.8 ENSMUST00000156054.2 |
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| CDS GCA 72 bp | TCAGACTGTGCATGCCGGAAGCTGGTGGACAGCTCCTaGAGGGCCTGTGCCAAGGAGGCCACCACGTTCCGC | + |
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Preference number: 6 (lower is better) Translates to: SDCACRKLVDSS*RACAKEATTFR Trigger: GCGGAACGTGGTGGCCTCCTTGGCACAGGCCCTGCAGGAGCTGTCCACCAGCTTCCGGCATGCACAGTCTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 ENSMUST00000147038.8 ENSMUST00000156054.2 |
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| CDS GCA 72 bp | TGCGGTCATCAGCAAGCTCGTCCAGCTCCGCAGCAATaGTACGTGAATGCAGAGGGCTGGAGGTGGTGTGAC | + |
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Preference number: 6 (lower is better) Translates to: CGHQQARPAPQQ*YVNAEGWRWCD Trigger: GTCACACCACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCGGAGCTGGACGAGCTTGCTGATGACCGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087908.10 ENSMUST00000156054.2 |
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| CDS CCA 72 bp | CCGCAGCAATGCTACGTGAATGCAGAGGGCTGGAGGTaGTGTGACTACTCACTTGCTCGGCTAACAGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: PQQCYVNAEGWR*CDYSLARLTAA Trigger: GGCAGCTGTTAGCCGAGCAAGTGAGTAGTCACACCACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 ENSMUST00000156054.2 |
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| CDS TCA 72 bp | ATCAGCAAGCTCGTCCAGCTCCGCAGCAATGCTACGTaGATGCAGAGGGCTGGAGGTGGTGTGACTACTCAC | + |
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Preference number: 6 (lower is better) Translates to: ISKLVQLRSNAT*MQRAGGGVTTH Trigger: GTGAGTAGTCACACCACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCGGAGCTGGACGAGCTTGCTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087908.10 ENSMUST00000156054.2 |
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| CDS GCA 72 bp | ATCTCTCGCTCCCTCTCCTCCACCATCAGTGTGTTTTaGTCTACCAGCACCAGCTGGTCATCCGTGAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: ISRSLSSTISVF*STSTSWSSVKP Trigger: GGGCTTCACGGATGACCAGCTGGTGCTGGTAGAGCAAAACACACTGATGGTGGAGGAGAGGGAGCGAGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| CDS CCA 72 bp | GCACGCTGGCACCTATGGAAGAGCTGTGTGACTTCCTaGGTGGTGATCTCGATGGCATGTTCCTCCTCACTG | + |
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Preference number: 6 (lower is better) Translates to: ARWHLWKSCVTS*VVISMACSSSL Trigger: CAGTGAGGAGGAACATGCCATCGAGATCACCACCCAGGAAGTCACACAGCTCTTCCATAGGTGCCAGCGTGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 ENSMUST00000147038.8 ENSMUST00000155000.8 ENSMUST00000156054.2 |
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| CDS CAA 90 bp | ATGCGGCCAACATCATACTGTATTTCGTCCACGCCATCCACCCACTaGGGAGGCGACCGCTTTGTCACGCCAATTGCTGCTTCTGGATCT | + |
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Preference number: 6 (lower is better) Translates to: MRPTSYCISSTPSTH*GGDRFVTPIAASGS Trigger: AGATCCAGAAGCAGCAATTGGCGTGACAAAGCGGTCGCCTCCCAAGTGGGTGGATGGCGTGGACGAAATACAGTATGATGTTGGCCGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 ENSMUST00000147038.8 ENSMUST00000155000.8 ENSMUST00000156054.2 |
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| CDS GCA 72 bp | GGTCATCAGCAAGTTCTGTATCACACTCCGCAGCAATaGTACGTGAATGCAGAGGGCTGGAGGTGGTGTGAC | + |
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Preference number: 6 (lower is better) Translates to: GHQQVLYHTPQQ*YVNAEGWRWCD Trigger: GTCACACCACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCGGAGTGTGATACAGAACTTGCTGATGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044638.13 |
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| CDS CCA 72 bp | CATCATACTGTATTTCGTCCACGCCATCCACCCACTTaGGAGGCGACCGCTTTGTCACGCCAATTGCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: HHTVFRPRHPPT*EATALSRQLLL Trigger: AAGCAGCAATTGGCGTGACAAAGCGGTCGCCTCCCAAGTGGGTGGATGGCGTGGACGAAATACAGTATGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 ENSMUST00000147038.8 ENSMUST00000155000.8 ENSMUST00000156054.2 |
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| CDS CAA 72 bp | ACATCATACTGTATTTCGTCCACGCCATCCACCCACTaGGGAGGCGACCGCTTTGTCACGCCAATTGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: TSYCISSTPSTH*GGDRFVTPIAA Trigger: AGCAGCAATTGGCGTGACAAAGCGGTCGCCTCCCAAGTGGGTGGATGGCGTGGACGAAATACAGTATGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 ENSMUST00000147038.8 ENSMUST00000155000.8 ENSMUST00000156054.2 |
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| CDS TCA 72 bp | TGCTCTACCAGCACCAGCTGGTCATCCGTGAAGCCCTaGCCATACAGAGTAGCATCATCTCCATCATCCATT | + |
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Preference number: 6 (lower is better) Translates to: CSTSTSWSSVKP*PYRVASSPSSI Trigger: AATGGATGATGGAGATGATGCTACTCTGTATGGTCAGGGCTTCACGGATGACCAGCTGGTGCTGGTAGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| CDS GCA 72 bp | CGAAGAAATGCTGCGATCTCTCCTCTCGGTTTTTCATaGGTTTCAGGTAGTCAGACTGTGCATGCCGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: RRNAAISPLGFS*VSGSQTVHAGS Trigger: GCTTCCGGCATGCACAGTCTGACTACCTGAAACGCATGAAAAACCGAGAGGAGAGATCGCAGCATTTCTTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 ENSMUST00000147038.8 ENSMUST00000156054.2 |
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| CDS TCA 72 bp | CATGGCTCCCAAGTCCCTGAAGATTTCATTGAGGTCTaGAATGGACTGCACAATCTGACGGATCTCTCGCTC | + |
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Preference number: 6 (lower is better) Translates to: HGSQVPEDFIEV*NGLHNLTDLSL Trigger: GAGCGAGAGATCCGTCAGATTGTGCAGTCCATTTCAGACCTCAATGAAATCTTCAGGGACTTGGGAGCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 |
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| CDS TCA 72 bp | ATCTTCCGGTTCTTCTTCTGGTACTGCTCAGCCTTGTaGAGCTGTTTCAAGCCATCTTCGGTCTTGACACAG | + |
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Preference number: 6 (lower is better) Translates to: IFRFFFWYCSAL*SCFKPSSVLTQ Trigger: CTGTGTCAAGACCGAAGATGGCTTGAAACAGCTTCACAAGGCTGAGCAGTACCAGAAGAAGAACCGGAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 ENSMUST00000156054.2 |
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| CDS GCA 72 bp | CCATCATCCATTAGTGGTACTGGGGTGTCGAAGAAATaGTGCGATCTCTCCTCTCGGTTTTTCATGCGTTTC | + |
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Preference number: 6 (lower is better) Translates to: PSSISGTGVSKK*CDLSSRFFMRF Trigger: GAAACGCATGAAAAACCGAGAGGAGAGATCGCAGCATTTCTTCGACACCCCAGTACCACTAATGGATGATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 ENSMUST00000147038.8 ENSMUST00000156054.2 |
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| CDS CCA 72 bp | TACTCACTTGCTCGGCTAACAGCTGCCGGGTTTGGATaGAATTATTCCGCAACAACAAGAAAGCGTCGGTTA | + |
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Preference number: 6 (lower is better) Translates to: YSLARLTAAGFG*NYSATTRKRRL Trigger: TAACCGACGCTTTCTTGTTGTTGCGGAATAATTCCATCCAAACCCGGCAGCTGTTAGCCGAGCAAGTGAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044638.13 ENSMUST00000087908.10 ENSMUST00000156054.2 |
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