Pregenerated sensors for STX12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028879Ensembl transcript IDs: ENSMUST00000030698.5
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGGCAATTCACCTCAGACCCAGACTGTCCCACACAACCTGGCAGTaGGCCGGCTCTGCCAGGTTCTTCTCATTTTGTCTGAAGTCACGG | + |
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Preference number: 1 (lower is better) Translates to: KAIHLRPRLSHTTWQ*AGSARFFSFCLKSR Trigger: CCGTGACTTCAGACAAAATGAGAAGAACCTGGCAGAGCCGGCCCACTGCCAGGTTGTGTGGGACAGTCTGGGTCTGAGGTGAATTGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR TCA 90 bp | CAACCTGGCAGTGGGCCGGCTCTGCCAGGTTCTTCTCATTTTGTCTaGAGTCACGGGTGCAATGTTCTTAATCCCCAGTTATATATAGTG | + |
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Preference number: 1 (lower is better) Translates to: QPGSGPALPGSSHFV*SHGCNVLNPQLYIV Trigger: CACTATATATAACTGGGGATTAAGAACATTGCACCCGTGACTTCAGACAAAATGAGAAGAACCTGGCAGAGCCGGCCCACTGCCAGGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR GCA 90 bp | GGAATCATGCCAAACGATCCACATTTACTATCCAAAATCGGGCTGTaGCTAATTCTTCCGTTCTATGCAGACAGGTGGGAGAGACCCGAC | + |
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Preference number: 1 (lower is better) Translates to: GIMPNDPHLLSKIGL*LILPFYADRWERPD Trigger: GTCGGGTCTCTCCCACCTGTCTGCATAGAACGGAAGAATTAGGCACAGCCCGATTTTGGATAGTAAATGTGGATCGTTTGGCATGATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR TCA 90 bp | AAACAGAGTCTGATCTCAAAGCTCTCATGCATCCCAGTCTGGCCTTaGACTCACAACCTGCCTGTCTTGTCTTCTCAGGTACTAGGATTA | + |
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Preference number: 1 (lower is better) Translates to: KQSLISKLSCIPVWP*THNLPVLSSQVLGL Trigger: TAATCCTAGTACCTGAGAAGACAAGACAGGCAGGTTGTGAGTTCAAGGCCAGACTGGGATGCATGAGAGCTTTGAGATCAGACTCTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR TCA 90 bp | GGGTCAGGATTAGCCTTTGACAGCAACATTTATCATTCACCAGAATaGAAGCCACAGGTGAACGAGATGGAATCATGCCAAACGATCCAC | + |
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Preference number: 1 (lower is better) Translates to: GSGLAFDSNIYHSPE*KPQVNEMESCQTIH Trigger: GTGGATCGTTTGGCATGATTCCATCTCGTTCACCTGTGGCTTTCATTCTGGTGAATGATAAATGTTGCTGTCAAAGGCTAATCCTGACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR GCA 90 bp | ACATTTACTATCCAAAATCGGGCTGTGCCTAATTCTTCCGTTCTATaGAGACAGGTGGGAGAGACCCGACTGATTGTAAGCATGGTAATG | + |
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Preference number: 1 (lower is better) Translates to: TFTIQNRAVPNSSVL*RQVGETRLIVSMVM Trigger: CATTACCATGCTTACAATCAGTCGGGTCTCTCCCACCTGTCTGCATAGAACGGAAGAATTAGGCACAGCCCGATTTTGGATAGTAAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR GCA 90 bp | GAACAAGGGTTTCTCTCTGAAGTTACCACGTGGGCCACTGTGTCGTaGAGACAGATTTTCTTCCTTTCCACCTTTGTCTTAAAAACAGAG | + |
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Preference number: 1 (lower is better) Translates to: EQGFLSEVTTWATVS*RQIFFLSTFVLKTE Trigger: CTCTGTTTTTAAGACAAAGGTGGAAAGGAAGAAAATCTGTCTGCACGACACAGTGGCCCACGTGGTAACTTCAGAGAGAAACCCTTGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR TCA 90 bp | CTTGGATTGTTGACACAAATGACATATCCAAGTCCAACTATGATCTaGGAACAAGGGTTTCTCTCTGAAGTTACCACGTGGGCCACTGTG | + |
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Preference number: 1 (lower is better) Translates to: LGLLTQMTYPSPTMI*EQGFLSEVTTWATV Trigger: CACAGTGGCCCACGTGGTAACTTCAGAGAGAAACCCTTGTTCTCAGATCATAGTTGGACTTGGATATGTCATTTGTGTCAACAATCCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR TCA 90 bp | ATCAAAGCCAGGCAACCCTTACTTACAAGGGTCAGGATTAGCCTTTaGCAGCAACATTTATCATTCACCAGAATGAAAGCCACAGGTGAA | + |
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Preference number: 1 (lower is better) Translates to: IKARQPLLTRVRISL*QQHLSFTRMKATGE Trigger: TTCACCTGTGGCTTTCATTCTGGTGAATGATAAATGTTGCTGTCAAAGGCTAATCCTGACCCTTGTAAGTAAGGGTTGCCTGGCTTTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR TCA 90 bp | CAGACAGATTTTCTTCCTTTCCACCTTTGTCTTAAAAACAGAGTCTaGTCTCAAAGCTCTCATGCATCCCAGTCTGGCCTTGAACTCACA | + |
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Preference number: 1 (lower is better) Translates to: QTDFLPFHLCLKNRV*SQSSHASQSGLELT Trigger: TGTGAGTTCAAGGCCAGACTGGGATGCATGAGAGCTTTGAGATCAGACTCTGTTTTTAAGACAAAGGTGGAAAGGAAGAAAATCTGTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR TCA 90 bp | GAGAGCCTAAACCAATTACACACTCTCTTGACTGTTCTAGGCCTGTaGAAAAGGGCAGTAGACAACATTTATATACAAGACAGAAACATT | + |
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Preference number: 1 (lower is better) Translates to: ESLNQLHTLLTVLGL*KRAVDNIYIQDRNI Trigger: AATGTTTCTGTCTTGTATATAAATGTTGTCTACTGCCCTTTTTCACAGGCCTAGAACAGTCAAGAGAGTGTGTAATTGGTTTAGGCTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR CAA 90 bp | CTCTCTTCTGTGGTCAGTCTGTTCTGGCAAGACTCTCTCAAGCACTaGCCCTTGAAAACAACTCAGCAGGAGGAGGCTCTGAGGCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: LSSVVSLFWQDSLKH*PLKTTQQEEALRQA Trigger: TGCTTGCCTCAGAGCCTCCTCCTGCTGAGTTGTTTTCAAGGGCAAGTGCTTGAGAGAGTCTTGCCAGAACAGACTGACCACAGAAGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR-3UTR CCA 90 bp | TTGGTATTAAGTAGGTGGGATGGTGCAAAAGCGCAGAGAAACTTATGCATGTGGCACACAACCTGGCAGTaGGCCGGCTCTGCCAGGTTC | + |
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Preference number: 2 (lower is better) Translates to: LVLSRWDGAKAQRNLCMWHTTWQ*AGSARF Trigger: GAACCTGGCAGAGCCGGCCCACTGCCAGGTTGTGTG...CCACATGCATAAGTTTCTCTGCGCTTTTGCACCATCCCACCTACTTAATACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR CAA 90 bp | CCACACAACCTGGCAGTGGGCCGGCTCTGCCAGGTTCTTCTCATTTaGTCTGAAGTCACGGGTGCAATGTTCTTAATCCCCAGTTATATA | + |
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Preference number: 2 (lower is better) Translates to: PHNLAVGRLCQVLLI*SEVTGAMFLIPSYI Trigger: TATATAACTGGGGATTAAGAACATTGCACCCGTGACTTCAGACAAAATGAGAAGAACCTGGCAGAGCCGGCCCACTGCCAGGTTGTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR-3UTR GCA 90 bp | GCATCCCAGTCTGGCCTTGAACTCACAACCTGCCTGTCTTGTCTTCTCAGGTACTGCTCTCCAGGTTTTTaGAGCTCTGTGTTTTCCATG | + |
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Preference number: 2 (lower is better) Translates to: ASQSGLELTTCLSCLLRYCSPGF*SSVFSM Trigger: CATGGAAAACACAGAGCTGCAAAAACCTGGAGAGCA...GTACCTGAGAAGACAAGACAGGCAGGTTGTGAGTTCAAGGCCAGACTGGGATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR CAA 90 bp | GCCAAGTTCCTACCTCTTCCCACAGCCATCGTGACAGCCACCACATaGTCATTATACAATCACAGCCACTTTGTTGTCCCAATAGCTTGT | + |
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Preference number: 2 (lower is better) Translates to: AKFLPLPTAIVTATT*SLYNHSHFVVPIAC Trigger: ACAAGCTATTGGGACAACAAAGTGGCTGTGATTGTATAATGACAATGTGGTGGCTGTCACGATGGCTGTGGGAAGAGGTAGGAACTTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR CAA 90 bp | AAAACAGAGTCTGATCTCAAAGCTCTCATGCATCCCAGTCTGGCCTaGAACTCACAACCTGCCTGTCTTGTCTTCTCAGGTACTAGGATT | + |
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Preference number: 2 (lower is better) Translates to: KTESDLKALMHPSLA*NSQPACLVFSGTRI Trigger: AATCCTAGTACCTGAGAAGACAAGACAGGCAGGTTGTGAGTTCAAGGCCAGACTGGGATGCATGAGAGCTTTGAGATCAGACTCTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR-3UTR GCA 90 bp | CCAGGTTTTTGCAGCTCTGTGTTTTCCATGGCAGAACAGTACCTAATACCTATGAATTCTTCCGTTCTATaGAGACAGGTGGGAGAGACC | + |
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Preference number: 2 (lower is better) Translates to: PGFCSSVFSMAEQYLIPMNSSVL*RQVGET Trigger: GGTCTCTCCCACCTGTCTGCATAGAACGGAAGAATT...CATAGGTATTAGGTACTGTTCTGCCATGGAAAACACAGAGCTGCAAAAACCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR-3UTR GCA 90 bp | TCTCTGAAGTTACCACGTGGGCCACTGTGTCGTGCAGACAGATTTTCTTCCTTTTCCAAAATCGGGCTGTaGCTAATTCTTCCGTTCTAT | + |
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Preference number: 2 (lower is better) Translates to: SLKLPRGPLCRADRFSSFSKIGL*LILPFY Trigger: ATAGAACGGAAGAATTAGGCACAGCCCGATTTTGGA...AAAGGAAGAAAATCTGTCTGCACGACACAGTGGCCCACGTGGTAACTTCAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR-3UTR TCA 90 bp | GACATTTCTGGCCTCAATTCACATTTATCTGAGAGCCTAAACCAATTACACACTTCAAGCACTTGCCCTTaGAAACAACTCAGCAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: DISGLNSHLSESLNQLHTSSTCP*KQLSRR Trigger: CCTCCTGCTGAGTTGTTTTCAAGGGCAAGTGCTTGA...AGTGTGTAATTGGTTTAGGCTCTCAGATAAATGTGAATTGAGGCCAGAAATGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR-3UTR TCA 90 bp | GACTGTTCTAGGCCTGTGAAAAAGGGCAGTAGACAACATTTATATACAAGACAGAATAGGTTCACAGACTaGGTTTTAAACCCCACTTCA | + |
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Preference number: 2 (lower is better) Translates to: DCSRPVKKGSRQHLYTRQNRFTD*VLNPTS Trigger: TGAAGTGGGGTTTAAAACTCAGTCTGTGAACCTATT...CTGTCTTGTATATAAATGTTGTCTACTGCCCTTTTTCACAGGCCTAGAACAGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR CCA 72 bp | CACCTCAGACCCAGACTGTCCCACACAACCTGGCAGTaGGCCGGCTCTGCCAGGTTCTTCTCATTTTGTCTG | + |
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Preference number: 3 (lower is better) Translates to: HLRPRLSHTTWQ*AGSARFFSFCL Trigger: CAGACAAAATGAGAAGAACCTGGCAGAGCCGGCCCACTGCCAGGTTGTGTGGGACAGTCTGGGTCTGAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR GCA 72 bp | CAGACTGTCCCACACAACCTGGCAGTGGGCCGGCTCTaGCAGGTTCTTCTCATTTTGTCTGAAGTCACGGGT | + |
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Preference number: 3 (lower is better) Translates to: QTVPHNLAVGRL*QVLLILSEVTG Trigger: ACCCGTGACTTCAGACAAAATGAGAAGAACCTGGCAGAGCCGGCCCACTGCCAGGTTGTGTGGGACAGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR CCA 72 bp | GCAATTCACCTCAGACCCAGACTGTCCCACACAACCTaGCAGTGGGCCGGCTCTGCCAGGTTCTTCTCATTT | + |
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Preference number: 3 (lower is better) Translates to: AIHLRPRLSHTT*QWAGSARFFSF Trigger: AAATGAGAAGAACCTGGCAGAGCCGGCCCACTGCCAGGTTGTGTGGGACAGTCTGGGTCTGAGGTGAATTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR TCA 72 bp | TCCAGGCCAAGTTCCTACCTCTTCCCACAGCCATCGTaGCAGCCACCACATTGTCATTATACAATCACAGCC | + |
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Preference number: 3 (lower is better) Translates to: SRPSSYLFPQPS*QPPHCHYTITA Trigger: GGCTGTGATTGTATAATGACAATGTGGTGGCTGTCACGATGGCTGTGGGAAGAGGTAGGAACTTGGCCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR TCA 72 bp | AGTGGGCCGGCTCTGCCAGGTTCTTCTCATTTTGTCTaGAGTCACGGGTGCAATGTTCTTAATCCCCAGTTA | + |
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Preference number: 3 (lower is better) Translates to: SGPALPGSSHFV*SHGCNVLNPQL Trigger: TAACTGGGGATTAAGAACATTGCACCCGTGACTTCAGACAAAATGAGAAGAACCTGGCAGAGCCGGCCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR TCA 72 bp | AAGTCCAACTATGATCTGAGAACAAGGGTTTCTCTCTaGAGTTACCACGTGGGCCACTGTGTCGTGCAGACA | + |
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Preference number: 3 (lower is better) Translates to: KSNYDLRTRVSL*SYHVGHCVVQT Trigger: TGTCTGCACGACACAGTGGCCCACGTGGTAACTTCAGAGAGAAACCCTTGTTCTCAGATCATAGTTGGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR GCA 72 bp | AGTAGGTGGGATGGTGCAAAAGCGCAGAGAAACTTATaGATGTGGGCCCTTGTTTCTCTGCTGGTCACATTA | + |
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Preference number: 3 (lower is better) Translates to: SRWDGAKAQRNL*MWALVSLLVTL Trigger: TAATGTGACCAGCAGAGAAACAAGGGCCCACATGCATAAGTTTCTCTGCGCTTTTGCACCATCCCACCTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR-3UTR CAA 90 bp | GCTGGCATATTGTACAGTTTCTCAGACTCTAATAGGCTGGCTCCAGATGGAAATCTCAAGCACTTGCCCTaGAAAACAACTCAGCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: AGILYSFSDSNRLAPDGNLKHLP*KTTQQE Trigger: CTCCTGCTGAGTTGTTTTCAAGGGCAAGTGCTTGAG...ATTTCCATCTGGAGCCAGCCTATTAGAGTCTGAGAAACTGTACAATATGCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR-3UTR CAA 90 bp | CAAGCCAAACCTTACCTGCTCTCCAGGTTTTTGCAGCTCTGTGTTTTCCATGGCCTAAATTTCAAAATCTaGCCATCAAAGCCAGGCAAC | + |
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Preference number: 3 (lower is better) Translates to: QAKPYLLSRFLQLCVFHGLNFKI*PSKPGN Trigger: GTTGCCTGGCTTTGATGGCAAGATTTTGAAATTTAG...GCCATGGAAAACACAGAGCTGCAAAAACCTGGAGAGCAGGTAAGGTTTGGCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR CCA 72 bp | AAATTATCACAGGACACTCTGGTACACTCTCTTCTGTaGTCAGTCTGTTCTGGCAAGACTCTCTCAAGCACT | + |
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Preference number: 3 (lower is better) Translates to: KLSQDTLVHSLL*SVCSGKTLSST Trigger: AGTGCTTGAGAGAGTCTTGCCAGAACAGACTGACCACAGAAGAGAGTGTACCAGAGTGTCCTGTGATAATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR CCA 72 bp | AAGCATGGTAATGAACCGATCCTCTCTAAACAGGAGTaGGATGGCTTAGTGTTCGAGGATGGACTCTGTAAA | + |
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Preference number: 3 (lower is better) Translates to: KHGNEPILSKQE*DGLVFEDGLCK Trigger: TTTACAGAGTCCATCCTCGAACACTAAGCCATCCCACTCCTGTTTAGAGAGGATCGGTTCATTACCATGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR TCA 72 bp | TTTCTTCCTTTCCACCTTTGTCTTAAAAACAGAGTCTaGTCTCAAAGCTCTCATGCATCCCAGTCTGGCCTT | + |
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Preference number: 3 (lower is better) Translates to: FLPFHLCLKNRV*SQSSHASQSGL Trigger: AAGGCCAGACTGGGATGCATGAGAGCTTTGAGATCAGACTCTGTTTTTAAGACAAAGGTGGAAAGGAAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR-3UTR CAA 90 bp | GACATTTCTGGCCTCAATTCACATTTATCTGAGAGCCTAAACCAATTACACACTGACTCTCTCAAGCACTaGCCCTTGAAAACAACTCAG | + |
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Preference number: 3 (lower is better) Translates to: DISGLNSHLSESLNQLHTDSLKH*PLKTTQ Trigger: CTGAGTTGTTTTCAAGGGCAAGTGCTTGAGAGAGTC...AGTGTGTAATTGGTTTAGGCTCTCAGATAAATGTGAATTGAGGCCAGAAATGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR TCA 72 bp | TTAGCCTTTGACAGCAACATTTATCATTCACCAGAATaGAAGCCACAGGTGAACGAGATGGAATCATGCCAA | + |
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Preference number: 3 (lower is better) Translates to: LAFDSNIYHSPE*KPQVNEMESCQ Trigger: TTGGCATGATTCCATCTCGTTCACCTGTGGCTTTCATTCTGGTGAATGATAAATGTTGCTGTCAAAGGCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR TCA 72 bp | TTGACACAAATGACATATCCAAGTCCAACTATGATCTaGGAACAAGGGTTTCTCTCTGAAGTTACCACGTGG | + |
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Preference number: 3 (lower is better) Translates to: LTQMTYPSPTMI*EQGFLSEVTTW Trigger: CCACGTGGTAACTTCAGAGAGAAACCCTTGTTCTCAGATCATAGTTGGACTTGGATATGTCATTTGTGTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR TCA 72 bp | AACCAATTACACACTCTCTTGACTGTTCTAGGCCTGTaGAAAAGGGCAGTAGACAACATTTATATACAAGAC | + |
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Preference number: 3 (lower is better) Translates to: NQLHTLLTVLGL*KRAVDNIYIQD Trigger: GTCTTGTATATAAATGTTGTCTACTGCCCTTTTTCACAGGCCTAGAACAGTCAAGAGAGTGTGTAATTGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR CCA 90 bp | CCTCAGACCCAGACTGTCCCACACAACCTGGCAGTGGGCCGGCTCTGCCAGGTTGCTTGGCTGATCCGCTaGATGTTGCCACTGCATGTC | + |
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Preference number: 4 (lower is better) Translates to: PQTQTVPHNLAVGRLCQVAWLIR*MLPLHV Trigger: GACATGCAGTGGCAACATCCAGCGGATCAGCCAAGC...AACCTGGCAGAGCCGGCCCACTGCCAGGTTGTGTGGGACAGTCTGGGTCTGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR TCA 90 bp | CGTTCTATGCAGACAGGTGGGAGAGACCCGACTGATTGTAAGCATGGTAATGAATTGAAGTCCCGGGGCTaGGGCCCCGACGGCCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: RSMQTGGRDPTDCKHGNELKSRG*GPDGPG Trigger: CCCCGGGCCGTCGGGGCCTCAGCCCCGGGACTTCAA...TTCATTACCATGCTTACAATCAGTCGGGTCTCTCCCACCTGTCTGCATAGAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR TCA 90 bp | CCTCAGACCCAGACTGTCCCACACAACCTGGCAGTGGGCCGGCTCTGCCAGGTTGACTGTAACAATCACTaGCAGGACAAGCACGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: PQTQTVPHNLAVGRLCQVDCNNH*QDKHED Trigger: ATCCTCGTGCTTGTCCTGTCAGTGATTGTTACAGTC...AACCTGGCAGAGCCGGCCCACTGCCAGGTTGTGTGGGACAGTCTGGGTCTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR CCA 90 bp | CTCAGACCCAGACTGTCCCACACAACCTGGCAGTGGGCCGGCTCTGCCAGGTTCTGGCCAGCTGATTTGTaGAGTGCTGTAACTGTTGCA | + |
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Preference number: 4 (lower is better) Translates to: LRPRLSHTTWQWAGSARFWPADL*SAVTVA Trigger: TGCAACAGTTACAGCACTCCACAAATCAGCTGGCCA...GAACCTGGCAGAGCCGGCCCACTGCCAGGTTGTGTGGGACAGTCTGGGTCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR TCA 90 bp | CAGACCCAGACTGTCCCACACAACCTGGCAGTGGGCCGGCTCTGCCAGGTTCTTTTCCTGGAGTTTGCTTaGGTCCTGCTTAGTTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: QTQTVPHNLAVGRLCQVLFLEFA*VLLSSK Trigger: CTTGGAACTAAGCAGGACTCAAGCAAACTCCAGGAA...AAGAACCTGGCAGAGCCGGCCCACTGCCAGGTTGTGTGGGACAGTCTGGGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR CCA 90 bp | CTCAGACCCAGACTGTCCCACACAACCTGGCAGTGGGCCGGCTCTGCCAGGTTCTCGATCAGATCACCTTaGTCATGGATCATCATAGCT | + |
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Preference number: 4 (lower is better) Translates to: LRPRLSHTTWQWAGSARFSIRSP*SWIIIA Trigger: AGCTATGATGATCCATGACCAAGGTGATCTGATCGA...GAACCTGGCAGAGCCGGCCCACTGCCAGGTTGTGTGGGACAGTCTGGGTCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR GCA 90 bp | CTCAGACCCAGACTGTCCCACACAACCTGGCAGTGGGCCGGCTCTGCCAGGTTCGAGTGCTGTAACTGTTaGAAATTTTCCTGGAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: LRPRLSHTTWQWAGSARFECCNC*KFSWSL Trigger: CAAACTCCAGGAAAATTTGCAACAGTTACAGCACTC...GAACCTGGCAGAGCCGGCCCACTGCCAGGTTGTGTGGGACAGTCTGGGTCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR CAA 72 bp | CTGGCAGTGGGCCGGCTCTGCCAGGTTCTTCTCATTTaGTCTGAAGTCACGGGTGCAATGTTCTTAATCCCC | + |
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Preference number: 4 (lower is better) Translates to: LAVGRLCQVLLI*SEVTGAMFLIP Trigger: GGGGATTAAGAACATTGCACCCGTGACTTCAGACAAAATGAGAAGAACCTGGCAGAGCCGGCCCACTGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR TCA 90 bp | ACCTTACCTGCTCTCCAGGTTTTTGCAGCTCTGTGTTTTCCATGGCAGAACAGTGAGCAGTGGCTTGGCTaGTCCGCTGGATGTTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: TLPALQVFAALCFPWQNSEQWLG*SAGCCH Trigger: GTGGCAACATCCAGCGGATCAGCCAAGCCACTGCTC...ACTGTTCTGCCATGGAAAACACAGAGCTGCAAAAACCTGGAGAGCAGGTAAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR CAA 72 bp | GTGGTCAGTCTGTTCTGGCAAGACTCTCTCAAGCACTaGCCCTTGAAAACAACTCAGCAGGAGGAGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: VVSLFWQDSLKH*PLKTTQQEEAL Trigger: CAGAGCCTCCTCCTGCTGAGTTGTTTTCAAGGGCAAGTGCTTGAGAGAGTCTTGCCAGAACAGACTGACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR CAA 72 bp | AGTCTGTTCTGGCAAGACTCTCTCAAGCACTTGCCCTaGAAAACAACTCAGCAGGAGGAGGCTCTGAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: SLFWQDSLKHLP*KTTQQEEALRQ Trigger: TTGCCTCAGAGCCTCCTCCTGCTGAGTTGTTTTCAAGGGCAAGTGCTTGAGAGAGTCTTGCCAGAACAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR CCA 90 bp | GAACGAGATGGAATCATGCCAAACGATCCACATTTACTATCCAAAATCGGGCTGGCCGCCTCTTCCTCCTaGCTCTGCATTTGGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ERDGIMPNDPHLLSKIGLAASSS*LCIWFH Trigger: GTGGAACCAAATGCAGAGCCAGGAGGAAGAGGCGGC...CAGCCCGATTTTGGATAGTAAATGTGGATCGTTTGGCATGATTCCATCTCGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR TCA 90 bp | TCTGTTCTGGCAAGACTCTCTCAAGCACTTGCCCTTGAAAACAACTCAGCAGGAGTTTCCTTGGCCAGCTaGTTTGTGGAGTGCTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SVLARLSQALALENNSAGVSLAS*FVECCN Trigger: GTTACAGCACTCCACAAATCAGCTGGCCAAGGAAAC...TCCTGCTGAGTTGTTTTCAAGGGCAAGTGCTTGAGAGAGTCTTGCCAGAACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR TCA 90 bp | TCTGTTCTGGCAAGACTCTCTCAAGCACTTGCCCTTGAAAACAACTCAGCAGGAACGAGAAGTCATTCATaGGCCGCTCCTTCTGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVLARLSQALALENNSAGTRSHS*AAPSEA Trigger: AGCTTCAGAAGGAGCGGCTCATGAATGACTTCTCGT...TCCTGCTGAGTTGTTTTCAAGGGCAAGTGCTTGAGAGAGTCTTGCCAGAACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR TCA 90 bp | ACAGGTGAACGAGATGGAATCATGCCAAACGATCCACATTTACTATCCAAAATCCCAGGTCTTGCTCAGTaGTGGCCGCCTCTTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TGERDGIMPNDPHLLSKIPGLAQ*WPPLPP Trigger: AGGAGGAAGAGGCGGCCATCACTGAGCAAGACCTGG...GATTTTGGATAGTAAATGTGGATCGTTTGGCATGATTCCATCTCGTTCACCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| 3UTR CAA 72 bp | CTACCTCTTCCCACAGCCATCGTGACAGCCACCACATaGTCATTATACAATCACAGCCACTTTGTTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPLPTAIVTATT*SLYNHSHFVVP Trigger: TGGGACAACAAAGTGGCTGTGATTGTATAATGACAATGTGGTGGCTGTCACGATGGCTGTGGGAAGAGGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR GCA 90 bp | CTGTTCTGGCAAGACTCTCTCAAGCACTTGCCCTTGAAAACAACTCAGCAGGAGAGTTTGCTTGAGTCCTaGTTAGTTCCAAGTTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LFWQDSLKHLPLKTTQQESLLES*LVPSWL Trigger: GAGCCAACTTGGAACTAAGCAGGACTCAAGCAAACT...CTCCTGCTGAGTTGTTTTCAAGGGCAAGTGCTTGAGAGAGTCTTGCCAGAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR GCA 90 bp | CTCTGTAAACACCAGCAGACAATAAAGGCAATTCACCTCAGACCCAGACTGTCCAGCTGCTCTTCTCTCTaGCTGTCTTCTGCAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LCKHQQTIKAIHLRPRLSSCSSL*LSSAER Trigger: TCTTTCTGCAGAAGACAGGCAGAGAGAAGAGCAGCT...GGACAGTCTGGGTCTGAGGTGAATTGCCTTTATTGTCTGCTGGTGTTTACAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR GCA 90 bp | CTGTTCTGGCAAGACTCTCTCAAGCACTTGCCCTTGAAAACAACTCAGCAGGAGCCACATTGGCTTCTATaGTATCGATCAGATCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: LFWQDSLKHLPLKTTQQEPHWLL*YRSDHL Trigger: AAGGTGATCTGATCGATAGCATAGAAGCCAATGTGG...CTCCTGCTGAGTTGTTTTCAAGGGCAAGTGCTTGAGAGAGTCTTGCCAGAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR CCA 90 bp | GAACGAGATGGAATCATGCCAAACGATCCACATTTACTATCCAAAATCGGGCTGTCCTGGCTCTGCATTTaGTTCCACTCTTCATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERDGIMPNDPHLLSKIGLSWLCI*FHSSWL Trigger: CAGCCATGAAGAGTGGAACCAAATGCAGAGCCAGGA...CAGCCCGATTTTGGATAGTAAATGTGGATCGTTTGGCATGATTCCATCTCGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR TCA 90 bp | TCTCTGAAGTTACCACGTGGGCCACTGTGTCGTGCAGACAGATTTTCTTCCTTTATCAAATTCTTTATCTaGGCAGTGGCTTGGCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: SLKLPRGPLCRADRFSSFIKFFI*AVAWLI Trigger: GATCAGCCAAGCCACTGCTCAGATAAAGAATTTGAT...AAAGGAAGAAAATCTGTCTGCACGACACAGTGGCCCACGTGGTAACTTCAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR GCA 90 bp | CACTCTCTTGACTGTTCTAGGCCTGTGAAAAAGGGCAGTAGACAACATTTATATCTCTCGCTCTCGCGATaGTCTCCTTTTCCTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSLDCSRPVKKGSRQHLYLSLSR*SPFPSQ Trigger: CTGAGAAGGAAAAGGAGAGCATCGCGAGAGCGAGAG...ATATAAATGTTGTCTACTGCCCTTTTTCACAGGCCTAGAACAGTCAAGAGAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR GCA 90 bp | CCTTACTTACAAGGGTCAGGATTAGCCTTTGACAGCAACATTTATCATTCACCATCTCTGCCTGTCTTCTaGAGAAAGACGAGATCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PYLQGSGLAFDSNIYHSPSLPVF*RKTRSG Trigger: GCCGGATCTCGTCTTTCTGCAGAAGACAGGCAGAGA...TGGTGAATGATAAATGTTGCTGTCAAAGGCTAATCCTGACCCTTGTAAGTAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR GCA 90 bp | CAACATTTATCATTCACCAGAATGAAAGCCACAGGTGAACGAGATGGAATCATGGTGGCTCTTTCCACATaGACCTCCGAGCTTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: QHLSFTRMKATGERDGIMVALST*TSELST Trigger: TGTGGAAAGCTCGGAGGTGCATGTGGAAAGAGCCAC...CATGATTCCATCTCGTTCACCTGTGGCTTTCATTCTGGTGAATGATAAATGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR CCA 90 bp | CACAGCCATCGTGACAGCCACCACATTGTCATTATACAATCACAGCCACTTTGTCCGAGCTTTCCACATTaGCTTCTATGCTATCGATCA | + |
|
Preference number: 4 (lower is better) Translates to: HSHRDSHHIVIIQSQPLCPSFPH*LLCYRS Trigger: TGATCGATAGCATAGAAGCCAATGTGGAAAGCTCGG...ACAAAGTGGCTGTGATTGTATAATGACAATGTGGTGGCTGTCACGATGGCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR CCA 90 bp | TTGCTGGCATATTGTACAGTTTCTCAGACTCTAATAGGCTGGCTCCAGATGGAATTTGTAGCTGATCAGTaGCTCTTTCCACATGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LLAYCTVSQTLIGWLQMEFVADQ*LFPHAP Trigger: AGGTGCATGTGGAAAGAGCCACTGATCAGCTACAAA...TTCCATCTGGAGCCAGCCTATTAGAGTCTGAGAAACTGTACAATATGCCAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR GCA 90 bp | GACATTTCTGGCCTCAATTCACATTTATCTGAGAGCCTAAACCAATTACACACTTCAAATGAGACGAGCTaGTCTTCTCTCTGCCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DISGLNSHLSESLNQLHTSNETS*SSLCLS Trigger: AGACAGGCAGAGAGAAGAGCAGCTCGTCTCATTTGA...AGTGTGTAATTGGTTTAGGCTCTCAGATAAATGTGAATTGAGGCCAGAAATGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR CCA 90 bp | CGTTCTATGCAGACAGGTGGGAGAGACCCGACTGATTGTAAGCATGGTAATGAATGCTTAGTTCCAAGTTaGCTCATCAAATTCTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: RSMQTGGRDPTDCKHGNECLVPS*LIKFFI Trigger: GATAAAGAATTTGATGAGCCAACTTGGAACTAAGCA...TTCATTACCATGCTTACAATCAGTCGGGTCTCTCCCACCTGTCTGCATAGAACG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR CCA 90 bp | CCTTACTTACAAGGGTCAGGATTAGCCTTTGACAGCAACATTTATCATTCACCATTTCTCTGCACAACCTaGAAATTGTTTAAGGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: PYLQGSGLAFDSNIYHSPFLCTT*KLFKAD Trigger: GTCGGCCTTAAACAATTTCCAGGTTGTGCAGAGAAA...TGGTGAATGATAAATGTTGCTGTCAAAGGCTAATCCTGACCCTTGTAAGTAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR CAA 90 bp | CTCAGACCCAGACTGTCCCACACAACCTGGCAGTGGGCCGGCTCTGCCAGGTTCTCCGAGCTTTCCACATaGGCTTCTATGCTATCGATC | + |
|
Preference number: 5 (lower is better) Translates to: LRPRLSHTTWQWAGSARFSELST*ASMLSI Trigger: GATCGATAGCATAGAAGCCAATGTGGAAAGCTCGGA...GAACCTGGCAGAGCCGGCCCACTGCCAGGTTGTGTGGGACAGTCTGGGTCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS GCA 90 bp | AGCTGCCGAATCGCCGTTTCCCTCTCTTTGATGAGTTCCAGGTCTTaGTCAGTGATGGCCGCCTCTTCCTCCTGGCTCTGCATTTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SCRIAVSLSLMSSRS*SVMAASSSWLCIWF Trigger: GAACCAAATGCAGAGCCAGGAGGAAGAGGCGGCCATCACTGAGCAAGACCTGGAACTCATCAAAGAGAGGGAAACGGCGATTCGGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS GCA 90 bp | GCCTGTCTTCTGCAGAAAGACGAGATCCGGCTCTCGCTCTCGCGATaGTCTCCTTTTCCTTCTCAGATACCTTTCTCTGCACAACCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ACLLQKDEIRLSLSR*SPFPSQIPFSAQPG Trigger: TCCAGGTTGTGCAGAGAAAGGTATCTGAGAAGGAAAAGGAGAGCATCGCGAGAGCGAGAGCCGGATCTCGTCTTTCTGCAGAAGACAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR CAA 90 bp | GCATCCCAGTCTGGCCTTGAACTCACAACCTGCCTGTCTTGTCTTCTCAGGTACATCGATCAGATCACCTaGGTCATGGATCATCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: ASQSGLELTTCLSCLLRYIDQIT*VMDHHS Trigger: GCTATGATGATCCATGACCAAGGTGATCTGATCGAT...GTACCTGAGAAGACAAGACAGGCAGGTTGTGAGTTCAAGGCCAGACTGGGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR CAA 90 bp | GCTGGCATATTGTACAGTTTCTCAGACTCTAATAGGCTGGCTCCAGATGGAAATCTGATCCGCTGGATGTaGCCACTGCATGTCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: AGILYSFSDSNRLAPDGNLIRWM*PLHVWM Trigger: CATCCAGACATGCAGTGGCAACATCCAGCGGATCAG...ATTTCCATCTGGAGCCAGCCTATTAGAGTCTGAGAAACTGTACAATATGCCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR CAA 90 bp | TTGGTATTAAGTAGGTGGGATGGTGCAAAAGCGCAGAGAAACTTATGCATGTGGTATCTGAGCAGTGGCTaGGCTGATCCGCTGGATGTT | + |
|
Preference number: 5 (lower is better) Translates to: LVLSRWDGAKAQRNLCMWYLSSG*ADPLDV Trigger: AACATCCAGCGGATCAGCCAAGCCACTGCTCAGATA...CCACATGCATAAGTTTCTCTGCGCTTTTGCACCATCCCACCTACTTAATACCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR CAA 90 bp | ACCTTACCTGCTCTCCAGGTTTTTGCAGCTCTGTGTTTTCCATGGCAGAACAGTTGCACAACCTGGAAATaGTTTAAGGCCGACGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TLPALQVFAALCFPWQNSCTTWK*FKADEK Trigger: CTTCTCGTCGGCCTTAAACAATTTCCAGGTTGTGCA...ACTGTTCTGCCATGGAAAACACAGAGCTGCAAAAACCTGGAGAGCAGGTAAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR CAA 90 bp | TTGGTATTAAGTAGGTGGGATGGTGCAAAAGCGCAGAGAAACTTATGCATGTGGCCTTCAGCAACTCATTaGTTTCCTTGGCCAGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LVLSRWDGAKAQRNLCMWPSATH*FPWPAD Trigger: ATCAGCTGGCCAAGGAAACAAATGAGTTGCTGAAGG...CCACATGCATAAGTTTCTCTGCGCTTTTGCACCATCCCACCTACTTAATACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR CAA 90 bp | CCTTACTTACAAGGGTCAGGATTAGCCTTTGACAGCAACATTTATCATTCACCACTCCTGGCTCTGCATTaGGTTCCACTCTTCATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PYLQGSGLAFDSNIYHSPLLALH*VPLFMA Trigger: AGCCATGAAGAGTGGAACCAAATGCAGAGCCAGGAG...TGGTGAATGATAAATGTTGCTGTCAAAGGCTAATCCTGACCCTTGTAAGTAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS TCA 90 bp | AAGGACCCTAATTCCTTCAGCAACTCATTTGTTTCCTTGGCCAGCTaGTTTGTGGAGTGCTGTAACTGTTGCAAATTTTCCTGGAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: KDPNSFSNSFVSLAS*FVECCNCCKFSWSL Trigger: CAAACTCCAGGAAAATTTGCAACAGTTACAGCACTCCACAAATCAGCTGGCCAAGGAAACAAATGAGTTGCTGAAGGAATTAGGGTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS CCA 90 bp | CTAATTCCTTCAGCAACTCATTTGTTTCCTTGGCCAGCTGATTTGTaGAGTGCTGTAACTGTTGCAAATTTTCCTGGAGTTTGCTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LIPSATHLFPWPADL*SAVTVANFPGVCLS Trigger: ACTCAAGCAAACTCCAGGAAAATTTGCAACAGTTACAGCACTCCACAAATCAGCTGGCCAAGGAAACAAATGAGTTGCTGAAGGAATTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS-3UTR CAA 90 bp | GCTGGCATATTGTACAGTTTCTCAGACTCTAATAGGCTGGCTCCAGATGGAAATCTGCTTAGTTCCAAGTaGGCTCATCAAATTCTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: AGILYSFSDSNRLAPDGNLLSSK*AHQILY Trigger: ATAAAGAATTTGATGAGCCAACTTGGAACTAAGCAG...ATTTCCATCTGGAGCCAGCCTATTAGAGTCTGAGAAACTGTACAATATGCCAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS GCA 72 bp | ATCGCCGTTTCCCTCTCTTTGATGAGTTCCAGGTCTTaGTCAGTGATGGCCGCCTCTTCCTCCTGGCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: IAVSLSLMSSRS*SVMAASSSWLC Trigger: GCAGAGCCAGGAGGAAGAGGCGGCCATCACTGAGCAAGACCTGGAACTCATCAAAGAGAGGGAAACGGCGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS GCA 72 bp | CTGCAGAAAGACGAGATCCGGCTCTCGCTCTCGCGATaGTCTCCTTTTCCTTCTCAGATACCTTTCTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LQKDEIRLSLSR*SPFPSQIPFSA Trigger: TGCAGAGAAAGGTATCTGAGAAGGAAAAGGAGAGCATCGCGAGAGCGAGAGCCGGATCTCGTCTTTCTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS CAA 90 bp | CAGACAAGGGTAGGGGCAAGGACCCTAATTCCTTCAGCAACTCATTaGTTTCCTTGGCCAGCTGATTTGTGGAGTGCTGTAACTGTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: QTRVGARTLIPSATH*FPWPADLWSAVTVA Trigger: TGCAACAGTTACAGCACTCCACAAATCAGCTGGCCAAGGAAACAAATGAGTTGCTGAAGGAATTAGGGTCCTTGCCCCTACCCTTGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS CAA 72 bp | GTAGGGGCAAGGACCCTAATTCCTTCAGCAACTCATTaGTTTCCTTGGCCAGCTGATTTGTGGAGTGCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: VGARTLIPSATH*FPWPADLWSAV Trigger: TACAGCACTCCACAAATCAGCTGGCCAAGGAAACAAATGAGTTGCTGAAGGAATTAGGGTCCTTGCCCCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS CAA 72 bp | TCCTTCTCAGATACCTTTCTCTGCACAACCTGGAAATaGTTTAAGGCCGACGAGAAGTCATTCATGAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SFSDTFLCTTWK*FKADEKSFMSR Trigger: GCGGCTCATGAATGACTTCTCGTCGGCCTTAAACAATTTCCAGGTTGTGCAGAGAAAGGTATCTGAGAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS CAA 72 bp | CCTTCAGCAACTCATTTGTTTCCTTGGCCAGCTGATTaGTGGAGTGCTGTAACTGTTGCAAATTTTCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PSATHLFPWPAD*WSAVTVANFPG Trigger: TCCAGGAAAATTTGCAACAGTTACAGCACTCCACAAATCAGCTGGCCAAGGAAACAAATGAGTTGCTGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS CAA 90 bp | ACCCTAATTCCTTCAGCAACTCATTTGTTTCCTTGGCCAGCTGATTaGTGGAGTGCTGTAACTGTTGCAAATTTTCCTGGAGTTTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TLIPSATHLFPWPAD*WSAVTVANFPGVCL Trigger: CAAGCAAACTCCAGGAAAATTTGCAACAGTTACAGCACTCCACAAATCAGCTGGCCAAGGAAACAAATGAGTTGCTGAAGGAATTAGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS CCA 72 bp | TCCTTTTCCTTCTCAGATACCTTTCTCTGCACAACCTaGAAATTGTTTAAGGCCGACGAGAAGTCATTCATG | + |
|
Preference number: 6 (lower is better) Translates to: SFSFSDTFLCTT*KLFKADEKSFM Trigger: CATGAATGACTTCTCGTCGGCCTTAAACAATTTCCAGGTTGTGCAGAGAAAGGTATCTGAGAAGGAAAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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| CDS TCA 72 bp | AATTCCTTCAGCAACTCATTTGTTTCCTTGGCCAGCTaGTTTGTGGAGTGCTGTAACTGTTGCAAATTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: NSFSNSFVSLAS*FVECCNCCKFS Trigger: GGAAAATTTGCAACAGTTACAGCACTCCACAAATCAGCTGGCCAAGGAAACAAATGAGTTGCTGAAGGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030698.5 |
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