Pregenerated sensors for STUM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053963Ensembl transcript IDs: ENSMUST00000136521.2, ENSMUST00000179826.2, ENSMUST00000211561.2
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCGCTGTGGGGGCCGCTCTTGCCAGGCCTGTCATCACTAGCTCTGTaGGATGAAGGGCTGTGGGCGGACATCGTGGGAGGGCACACTGAC | + |
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Preference number: 1 (lower is better) Translates to: SLWGPLLPGLSSLAL*DEGLWADIVGGHTD Trigger: GTCAGTGTGCCCTCCCACGATGTCCGCCCACAGCCCTTCATCCCACAGAGCTAGTGATGACAGGCCTGGCAAGAGCGGCCCCCACAGCGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR TCA 90 bp | GCCCAGTATCCCTGGCACTGGCACTATCCTGCCTCTAGCCCAGTCTaGTGTTCTGGGCCTGTTCCTCCTGTGCGCTCTGGAGCAGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: AQYPWHWHYPASSPV*CSGPVPPVRSGAGR Trigger: TCTCCCTGCTCCAGAGCGCACAGGAGGAACAGGCCCAGAACATCAGACTGGGCTAGAGGCAGGATAGTGCCAGTGCCAGGGATACTGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
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| 3UTR CCA 90 bp | ACAGTAGCATTGCTGGAAGGAAGGTCTTCAAAGCTGGCAGAAGGCTaGAGGAGAAGCGGGAGCCCTGCACTACCCCTGCGGGGCTCTGTG | + |
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Preference number: 1 (lower is better) Translates to: TVALLEGRSSKLAEG*RRSGSPALPLRGSV Trigger: CACAGAGCCCCGCAGGGGTAGTGCAGGGCTCCCGCTTCTCCTCCAGCCTTCTGCCAGCTTTGAAGACCTTCCTTCCAGCAATGCTACTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR TCA 90 bp | CACACTAGGCTATCACCTGGCCTTTCCACACTGGCAACCCCACCCTaGCACTGCCCCTGGGAGACCACCGAGCAAATACAGGGAACCATG | + |
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Preference number: 1 (lower is better) Translates to: HTRLSPGLSTLATPP*HCPWETTEQIQGTM Trigger: CATGGTTCCCTGTATTTGCTCGGTGGTCTCCCAGGGGCAGTGTCAGGGTGGGGTTGCCAGTGTGGAAAGGCCAGGTGATAGCCTAGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
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| 3UTR GCA 90 bp | TACAGTGATGCTGCCAGCATCTTCCAAAACAAAAGAGCTCCCGGGTaGAAGGGAGCCAGCCCGGGAAGAGCCCGCGACTACTCCACAGGA | + |
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Preference number: 1 (lower is better) Translates to: YSDAASIFQNKRAPG*KGASPGRARDYSTG Trigger: TCCTGTGGAGTAGTCGCGGGCTCTTCCCGGGCTGGCTCCCTTGCACCCGGGAGCTCTTTTGTTTTGGAAGATGCTGGCAGCATCACTGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR CCA 90 bp | CTCCCTCACAGCACAGGGAGTGAACCTCATCCCAGGGCTGGCAGATaGTATCCTGGCTCCCTGCTTCCACTAGAGGGAAACCTTGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: LPHSTGSEPHPRAGR*YPGSLLPLEGNLAL Trigger: CAGAGCAAGGTTTCCCTCTAGTGGAAGCAGGGAGCCAGGATACCATCTGCCAGCCCTGGGATGAGGTTCACTCCCTGTGCTGTGAGGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR GCA 90 bp | ATCCTGCCTCTAGCCCAGTCTGATGTTCTGGGCCTGTTCCTCCTGTaGGCTCTGGAGCAGGGAGAGAAGTTAGCCTTGGAGCCTGCTAAG | + |
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Preference number: 1 (lower is better) Translates to: ILPLAQSDVLGLFLL*ALEQGEKLALEPAK Trigger: CTTAGCAGGCTCCAAGGCTAACTTCTCTCCCTGCTCCAGAGCGCACAGGAGGAACAGGCCCAGAACATCAGACTGGGCTAGAGGCAGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
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| 3UTR CCA 90 bp | AATGGCAGAAGAGAATATATGAAGGTCCTTGTGCCTAGAGCCACCTaGCGTGGCCCTCACAGGACCCTGGACTTCCCCCGCAGGTCCTGT | + |
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Preference number: 1 (lower is better) Translates to: NGRREYMKVLVPRAT*RGPHRTLDFPRRSC Trigger: ACAGGACCTGCGGGGGAAGTCCAGGGTCCTGTGAGGGCCACGCCAGGTGGCTCTAGGCACAAGGACCTTCATATATTCTCTTCTGCCATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
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| 3UTR GCA 90 bp | AGCTCAGGACCTGAGCACTTTAGCACTGAAAGAACGCTTGCTAACTaGAGAGCCTCCCTCACAGCACAGGGAGTGAACCTCATCCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: SSGPEHFSTERTLAN*RASLTAQGVNLIPG Trigger: CCCTGGGATGAGGTTCACTCCCTGTGCTGTGAGGGAGGCTCTGCAGTTAGCAAGCGTTCTTTCAGTGCTAAAGTGCTCAGGTCCTGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR TCA 90 bp | ACACAGGGTAGGGCAGGCGAGCCAGCCCAGAGTCAGGGCCAGAAATaGGTACATCATGGGACTCCATCTCTTCATGATGTCGGACTTCTA | + |
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Preference number: 1 (lower is better) Translates to: TQGRAGEPAQSQGQK*VHHGTPSLHDVGLL Trigger: TAGAAGTCCGACATCATGAAGAGATGGAGTCCCATGATGTACTCATTTCTGGCCCTGACTCTGGGCTGGCTCGCCTGCCCTACCCTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR CCA 90 bp | ATTAGCCACTGTCTATCGGCTGAGAATGGTTATGCTAATCAGGCCTaGCCCAGGGGGCTGATGCTTGGAGCTAGTAGCACCCCTCAGACT | + |
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Preference number: 1 (lower is better) Translates to: ISHCLSAENGYANQA*PRGLMLGASSTPQT Trigger: AGTCTGAGGGGTGCTACTAGCTCCAAGCATCAGCCCCCTGGGCCAGGCCTGATTAGCATAACCATTCTCAGCCGATAGACAGTGGCTAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR TCA 90 bp | CACTTCCTGATGTTTGCTCTGCCTAGTAAGGATCTGGCTCTGTACTaGTCAGTCCCAGGTTTGCTGCTTAAAGGGGCACATGCCCCGCCA | + |
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Preference number: 1 (lower is better) Translates to: HFLMFALPSKDLALY*SVPGLLLKGAHAPP Trigger: TGGCGGGGCATGTGCCCCTTTAAGCAGCAAACCTGGGACTGATCAGTACAGAGCCAGATCCTTACTAGGCAGAGCAAACATCAGGAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR TCA 90 bp | AAGGCAGAAAGTGGACGGCTCCTTTCTTTAGCCCTGGCCACACTGTaGCAGAGTTTCAGGCAGATGATGAGGGACCCACTGATGGCTCAA | + |
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Preference number: 1 (lower is better) Translates to: KAESGRLLSLALATL*QSFRQMMRDPLMAQ Trigger: TTGAGCCATCAGTGGGTCCCTCATCATCTGCCTGAAACTCTGTCACAGTGTGGCCAGGGCTAAAGAAAGGAGCCGTCCACTTTCTGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR TCA 90 bp | GCTCTCATCCTTCGGAGGACGTTCATCATCCCTCCCTGTGACTTCTaGGAGGTATGTGTCTCAGGGAGAAGCCTCTGGTCTCCTTGTGAA | + |
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Preference number: 1 (lower is better) Translates to: ALILRRTFIIPPCDF*EVCVSGRSLWSPCE Trigger: TTCACAAGGAGACCAGAGGCTTCTCCCTGAGACACATACCTCTCAGAAGTCACAGGGAGGGATGATGAACGTCCTCCGAAGGATGAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR GCA 90 bp | TGCCTAGTAAGGATCTGGCTCTGTACTGATCAGTCCCAGGTTTGCTaGTTAAAGGGGCACATGCCCCGCCAACAACTTCAGCCTCACGAT | + |
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Preference number: 1 (lower is better) Translates to: CLVRIWLCTDQSQVC*LKGHMPRQQLQPHD Trigger: ATCGTGAGGCTGAAGTTGTTGGCGGGGCATGTGCCCCTTTAAGCAGCAAACCTGGGACTGATCAGTACAGAGCCAGATCCTTACTAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR TCA 90 bp | AAATACTGCTCTCATCCTTCGGAGGACGTTCATCATCCCTCCCTGTaGCTTCTGAGAGGTATGTGTCTCAGGGAGAAGCCTCTGGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: KYCSHPSEDVHHPSL*LLRGMCLREKPLVS Trigger: GGAGACCAGAGGCTTCTCCCTGAGACACATACCTCTCAGAAGTCACAGGGAGGGATGATGAACGTCCTCCGAAGGATGAGAGCAGTATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR GCA 90 bp | ACACATGAACTTCAGGTCAAAGTCCCCAACCTGATGATGTCACTCTaGAGGTCTCACGGTTCAAATGCAGTCCAGTCTCCAACGTCCCCC | + |
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Preference number: 1 (lower is better) Translates to: THELQVKVPNLMMSL*RSHGSNAVQSPTSP Trigger: GGGGGACGTTGGAGACTGGACTGCATTTGAACCGTGAGACCTGCAGAGTGACATCATCAGGTTGGGGACTTTGACCTGAAGTTCATGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR CCA 90 bp | AACAGGAGCTGCTTTTCAAGAGCCTCCATCCACCAAGGCAGAAAGTaGACGGCTCCTTTCTTTAGCCCTGGCCACACTGTGACAGAGTTT | + |
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Preference number: 1 (lower is better) Translates to: NRSCFSRASIHQGRK*TAPFFSPGHTVTEF Trigger: AAACTCTGTCACAGTGTGGCCAGGGCTAAAGAAAGGAGCCGTCCACTTTCTGCCTTGGTGGATGGAGGCTCTTGAAAAGCAGCTCCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR TCA 90 bp | CTTCTGAGAGGTATGTGTCTCAGGGAGAAGCCTCTGGTCTCCTTGTaGAAGCTTAACAAAAACTCCCCACAGGTTGCTCACAGAACAGCA | + |
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Preference number: 1 (lower is better) Translates to: LLRGMCLREKPLVSL*KLNKNSPQVAHRTA Trigger: TGCTGTTCTGTGAGCAACCTGTGGGGAGTTTTTGTTAAGCTTTCACAAGGAGACCAGAGGCTTCTCCCTGAGACACATACCTCTCAGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR TCA 90 bp | AACTCTGGTCACCTAGAACCAATGGCCTGCTTGGACTGTGAGGAGTaGATTAGCCACTGTCTATCGGCTGAGAATGGTTATGCTAATCAG | + |
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Preference number: 1 (lower is better) Translates to: NSGHLEPMACLDCEE*ISHCLSAENGYANQ Trigger: CTGATTAGCATAACCATTCTCAGCCGATAGACAGTGGCTAATTCACTCCTCACAGTCCAAGCAGGCCATTGGTTCTAGGTGACCAGAGTT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR CCA 90 bp | CTATTCACAGGATTCTCGAGTGATATCCACGTGTTTGGCAATGGGTaGGAAGCCCAGACTCCACTGGGATGTCAAGAAACAGTAACAAAC | + |
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Preference number: 1 (lower is better) Translates to: LFTGFSSDIHVFGNG*EAQTPLGCQETVTN Trigger: GTTTGTTACTGTTTCTTGACATCCCAGTGGAGTCTGGGCTTCCCACCCATTGCCAAACACGTGGATATCACTCGAGAATCCTGTGAATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR TCA 90 bp | GAGTCGGCCTTTCTCTTAATTTCATATCGGTACCTTCCCACTTCCTaGTGTTTGCTCTGCCTAGTAAGGATCTGGCTCTGTACTGATCAG | + |
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Preference number: 1 (lower is better) Translates to: ESAFLLISYRYLPTS*CLLCLVRIWLCTDQ Trigger: CTGATCAGTACAGAGCCAGATCCTTACTAGGCAGAGCAAACATCAGGAAGTGGGAAGGTACCGATATGAAATTAAGAGAAAGGCCGACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR CCA 90 bp | GCATATAAACATTCAGATACTAACAGTAGCATTCCAGAAGTAGAGTaGGTGCCACCTCCCCACTACCCCCAGTCAAATCACAAAGTCACA | + |
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Preference number: 1 (lower is better) Translates to: AYKHSDTNSSIPEVE*VPPPHYPQSNHKVT Trigger: TGTGACTTTGTGATTTGACTGGGGGTAGTGGGGAGGTGGCACCCACTCTACTTCTGGAATGCTACTGTTAGTATCTGAATGTTTATATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR CCA 90 bp | AACCAAACAAACCAACTTTCCTCTTTCCTGGTGCATGTTGCTTTTTaGTCAGGGTATTTTACCACAGCAACAGAAATGGAGCTACGACAG | + |
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Preference number: 1 (lower is better) Translates to: NQTNQLSSFLVHVAF*SGYFTTATEMELRQ Trigger: CTGTCGTAGCTCCATTTCTGTTGCTGTGGTAAAATACCCTGACCAAAAAGCAACATGCACCAGGAAAGAGGAAAGTTGGTTTGTTTGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR CCA 90 bp | GACTTAGGCACTTCTAGTTCCTGCCATCATGACTCCTCCCTACGATaGACTGTACATAGGCTAGATTATAAACCAAACAAACCAACTTTC | + |
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Preference number: 1 (lower is better) Translates to: DLGTSSSCHHDSSLR*TVHRLDYKPNKPTF Trigger: GAAAGTTGGTTTGTTTGGTTTATAATCTAGCCTATGTACAGTCCATCGTAGGGAGGAGTCATGATGGCAGGAACTAGAAGTGCCTAAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR GCA 90 bp | GATTATAAACCAAACAAACCAACTTTCCTCTTTCCTGGTGCATGTTaGTTTTTGGTCAGGGTATTTTACCACAGCAACAGAAATGGAGCT | + |
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Preference number: 1 (lower is better) Translates to: DYKPNKPTFLFPGAC*FLVRVFYHSNRNGA Trigger: AGCTCCATTTCTGTTGCTGTGGTAAAATACCCTGACCAAAAAGCAACATGCACCAGGAAAGAGGAAAGTTGGTTTGTTTGGTTTATAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR-3UTR TCA 90 bp | AGTAGAGTGGGTGCCACCTCCCCACTACCCCCAGTCAAATCACAAAGTCACACCCTGGCAACCCCACCCTaGCACTGCCCCTGGGAGACC | + |
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Preference number: 2 (lower is better) Translates to: SRVGATSPLPPVKSQSHTLATPP*HCPWET Trigger: GGTCTCCCAGGGGCAGTGTCAGGGTGGGGTTGCCAG...GGTGTGACTTTGTGATTTGACTGGGGGTAGTGGGGAGGTGGCACCCACTCTACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGGGAACCATGTGGTCAAGCAGGGCGTGAGGACCCAGAGGAAGTGTTCCGTGGGCCTGTTCCTCCTGTaGGCTCTGGAGCAGGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: TGNHVVKQGVRTQRKCSVGLFLL*ALEQGE Trigger: CTCTCCCTGCTCCAGAGCGCACAGGAGGAACAGGCC...CACGGAACACTTCCTCTGGGTCCTCACGCCCTGCTTGACCACATGGTTCCCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCACCCTGACACTGCCCCTGGGAGACCACCGAGCAAATACAGGGAACCATGTGCCTCTAGCCCAGTCTaGTGTTCTGGGCCTGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: PHPDTAPGRPPSKYREPCASSPV*CSGPVP Trigger: AGGAACAGGCCCAGAACATCAGACTGGGCTAGAGGC...ACATGGTTCCCTGTATTTGCTCGGTGGTCTCCCAGGGGCAGTGTCAGGGTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCACCCTGACACTGCCCCTGGGAGACCACCGAGCAAATACAGGGAACCATGTCTGATCACCTGCATGTaGCCTACAGCAGCCCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: PHPDTAPGRPPSKYREPCLITCM*PTAAQP Trigger: AGGCTGGGCTGCTGTAGGTCACATGCAGGTGATCAG...ACATGGTTCCCTGTATTTGCTCGGTGGTCTCCCAGGGGCAGTGTCAGGGTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
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| 3UTR-3UTR TCA 90 bp | GATGCAGTGGGAATTCTGATCCCACAGACCCCAGGAGAGGGCAACCGGTGTGCAGGTGACTGGCCAGGGTaGGGACAGCAGTTTTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: DAVGILIPQTPGEGNRCAGDWPG*GQQFCG Trigger: GCCACAAAACTGCTGTCCTCACCCTGGCCAGTCACC...TGCACACCGGTTGCCCTCTCCTGGGGTCTGTGGGATCAGAATTCCCACTGCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR CAA 90 bp | GACCTAGATCCCATGAGCCAGGCAGCTCCGGGCACCGACTCTGTCTaGAGCTGCCATCTGCTTCCATCTTCCATTCGGGACCTGCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: DLDPMSQAAPGTDSV*SCHLLPSSIRDLQK Trigger: CTTCTGCAGGTCCCGAATGGAAGATGGAAGCAGATGGCAGCTCAAGACAGAGTCGGTGCCCGGAGCTGCCTGGCTCATGGGATCTAGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR-3UTR TCA 90 bp | ACACTAGGCTATCACCTGGCCTTTCCACACTGGCAACCCCACCCTGACACTGCCTGGTCAAGCAGGGCGTaGGGACCCAGAGGAAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: TLGYHLAFPHWQPHPDTAWSSRA*GPRGSV Trigger: AACACTTCCTCTGGGTCCTCACGCCCTGCTTGACCA...GGCAGTGTCAGGGTGGGGTTGCCAGTGTGGAAAGGCCAGGTGATAGCCTAGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
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| 3UTR-3UTR GCA 90 bp | GTAGGAGATGCAGTGGCCAGCTGGTTCTCTAAGTCCAAGCCCTCTCCAACCACACTGAGTTCTCCCCGCTaGTCCTCAGCCCCCAGCATC | + |
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Preference number: 2 (lower is better) Translates to: VGDAVASWFSKSKPSPTTLSSPR*SSAPSI Trigger: GATGCTGGGGGCTGAGGAGCAGCGGGGAGAACTCAG...TGTGGTTGGAGAGGGCTTGGACTTAGAGAACCAGCTGGCCACTGCATCTCCTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR-3UTR CCA 90 bp | CCGGTAGCCACCCCCAGCAGAAGCCAGGGAAATAGACTTCTCCCTCGCTGTGGGATTCCAGAAGTAGAGTaGGTGCCACCTCCCCACTAC | + |
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Preference number: 2 (lower is better) Translates to: PVATPSRSQGNRLLPRCGIPEVE*VPPPHY Trigger: GTAGTGGGGAGGTGGCACCCACTCTACTTCTGGAAT...CCCACAGCGAGGGAGAAGTCTATTTCCCTGGCTTCTGCTGGGGGTGGCTACCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTGGGTGCCACCTCCCCACTACCCCCAGTCAAATCACAAAGTCACACCCAACGCCTCTAGCCCAGTCTaGTGTTCTGGGCCTGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: EWVPPPHYPQSNHKVTPNASSPV*CSGPVP Trigger: AGGAACAGGCCCAGAACATCAGACTGGGCTAGAGGC...GTTGGGTGTGACTTTGTGATTTGACTGGGGGTAGTGGGGAGGTGGCACCCACTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
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| 3UTR-3UTR TCA 90 bp | GATGCAGTGGGAATTCTGATCCCACAGACCCCAGGAGAGGGCAACCGGTGTGCAGCAGTTTTGTGGCTTTaGGTTGTCCCCACACTGGGG | + |
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Preference number: 2 (lower is better) Translates to: DAVGILIPQTPGEGNRCAAVLWL*VVPTLG Trigger: CCCCAGTGTGGGGACAACTCAAAGCCACAAAACTGC...TGCACACCGGTTGCCCTCTCCTGGGGTCTGTGGGATCAGAATTCCCACTGCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR-3UTR CCA 90 bp | TACAGGGAACCATGTGGTCAAGCAGGGCGTGAGGACCCAGAGGAAGTGTTCCGTCCCAGTCTGATGTTCTaGGCCTGTTCCTCCTGTGCG | + |
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Preference number: 2 (lower is better) Translates to: YREPCGQAGREDPEEVFRPSLMF*ACSSCA Trigger: CGCACAGGAGGAACAGGCCCAGAACATCAGACTGGG...ACGGAACACTTCCTCTGGGTCCTCACGCCCTGCTTGACCACATGGTTCCCTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
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| 3UTR CAA 90 bp | ATCAGTCCCCTTTCTGGTACAGCTTTGCTACCAGAGGTAGCCTCCTaGGGAGCAGTGATCTGCTGTGGAGAGAACCAAGCCTGGCCCCGT | + |
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Preference number: 2 (lower is better) Translates to: ISPLSGTALLPEVAS*GAVICCGENQAWPR Trigger: ACGGGGCCAGGCTTGGTTCTCTCCACAGCAGATCACTGCTCCCAAGGAGGCTACCTCTGGTAGCAAAGCTGTACCAGAAAGGGGACTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR-3UTR TCA 90 bp | AGTAGAGTGGGTGCCACCTCCCCACTACCCCCAGTCAAATCACAAAGTCACACCCTGATCACCTGCATGTaGCCTACAGCAGCCCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: SRVGATSPLPPVKSQSHTLITCM*PTAAQP Trigger: AGGCTGGGCTGCTGTAGGTCACATGCAGGTGATCAG...GGTGTGACTTTGTGATTTGACTGGGGGTAGTGGGGAGGTGGCACCCACTCTACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCCTGCTTCCACTAGAGGGAAACCTTGCTCTGCAATCCGACGCGCTTCTGCCGATCTGGCTCTGTACTaGTCAGTCCCAGGTTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: LPASTRGKPCSAIRRASADLALY*SVPGLL Trigger: CAGCAAACCTGGGACTGATCAGTACAGAGCCAGATC...GGCAGAAGCGCGTCGGATTGCAGAGCAAGGTTTCCCTCTAGTGGAAGCAGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTTGCTGTCACTGGTGGAGGCTGGATACTGTAGGGATGTGACCTACAGGGCAACTAGCTCTGTGGGATaGAGGGCTGTGGGCGGACAT | + |
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Preference number: 2 (lower is better) Translates to: SLLSLVEAGYCRDVTYRATSSVG*RAVGGH Trigger: ATGTCCGCCCACAGCCCTTCATCCCACAGAGCTAGT...TGCCCTGTAGGTCACATCCCTACAGTATCCAGCCTCCACCAGTGACAGCAAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTATTCAGTGTGTAGTTGGATAAGCATGCCCAGTATCCCTGGCACTGGCACTGGCCTGTTCCTCCTGTaGGCTCTGGAGCAGGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: AYSVCSWISMPSIPGTGTGLFLL*ALEQGE Trigger: CTCTCCCTGCTCCAGAGCGCACAGGAGGAACAGGCC...AGTGCCAGTGCCAGGGATACTGGGCATGCTTATCCAACTACACACTGAATAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGGGTGCCACCTCCCCACTACCCCCAGTCAAATCACAAAGTCACACCCAACACTGGCCTTTCCACACTaGCAACCCCACCCTGACACT | + |
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Preference number: 2 (lower is better) Translates to: SGCHLPTTPSQITKSHPTLAFPH*QPHPDT Trigger: AGTGTCAGGGTGGGGTTGCCAGTGTGGAAAGGCCAG...TGTTGGGTGTGACTTTGTGATTTGACTGGGGGTAGTGGGGAGGTGGCACCCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCCAGTGGGGCTGTGCTTGACTGGGCTTGGACTCTCTAGACTCTTGGCTTTGGTGTTTGGCAATGGGTaGGAAGCCCAGACTCCACTG | + |
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Preference number: 2 (lower is better) Translates to: LPVGLCLTGLGLSRLLALVFGNG*EAQTPL Trigger: CAGTGGAGTCTGGGCTTCCCACCCATTGCCAAACAC...CAAAGCCAAGAGTCTAGAGAGTCCAAGCCCAGTCAAGCACAGCCCCACTGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTTGCTGTCACTGGTGGAGGCTGGATACTGTAGGGATGTGACCTACAGGGCACCCCAAGACAGGGGCTaGGAACAAACAGAGCAACAG | + |
|
Preference number: 2 (lower is better) Translates to: SLLSLVEAGYCRDVTYRAPQDRG*EQTEQQ Trigger: CTGTTGCTCTGTTTGTTCTCAGCCCCTGTCTTGGGG...TGCCCTGTAGGTCACATCCCTACAGTATCCAGCCTCCACCAGTGACAGCAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCCAGCCCAGAGTCAGGGCCAGAAATGAGTACATCATGGGACTCCATCTCTTCCCCAGTCTGATGTTCTaGGCCTGTTCCTCCTGTGCG | + |
|
Preference number: 2 (lower is better) Translates to: SQPRVRARNEYIMGLHLFPSLMF*ACSSCA Trigger: CGCACAGGAGGAACAGGCCCAGAACATCAGACTGGG...GAAGAGATGGAGTCCCATGATGTACTCATTTCTGGCCCTGACTCTGGGCTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR-3UTR GCA 90 bp | GATGCAGTGGGAATTCTGATCCCACAGACCCCAGGAGAGGGCAACCGGTGTGCACAGAGAAACAGGAGCTaGTTTTCAAGAGCCTCCATC | + |
|
Preference number: 2 (lower is better) Translates to: DAVGILIPQTPGEGNRCAQRNRS*FSRASI Trigger: GATGGAGGCTCTTGAAAAGCAGCTCCTGTTTCTCTG...TGCACACCGGTTGCCCTCTCCTGGGGTCTGTGGGATCAGAATTCCCACTGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGGGAGTAGGAGATGCAGTGGCCAGCTGGTTCTCTAAGTCCAAGCCCTCTCCATCAGACTCACTGTTCTaGGGGCTCCTAAAGTCTACC | + |
|
Preference number: 2 (lower is better) Translates to: LGVGDAVASWFSKSKPSPSDSLF*GLLKST Trigger: GGTAGACTTTAGGAGCCCCCAGAACAGTGAGTCTGA...TGGAGAGGGCTTGGACTTAGAGAACCAGCTGGCCACTGCATCTCCTACTCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR CAA 90 bp | GTGGGGCTGTGCTTGACTGGGCTTGGACTCTCTAGACTCTTGGCTTaGGCAAGGTTGGGGGAAATGACGGACTGGCCTGATTTCTATACT | + |
|
Preference number: 2 (lower is better) Translates to: VGLCLTGLGLSRLLA*ARLGEMTDWPDFYT Trigger: AGTATAGAAATCAGGCCAGTCCGTCATTTCCCCCAACCTTGCCAAAGCCAAGAGTCTAGAGAGTCCAAGCCCAGTCAAGCACAGCCCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCCCTGCTTCCACTAGAGGGAAACCTTGCTCTGCAATCCGACGCGCTTCTGCCGCAGAAGAGAATATATaGAGGTCCTTGTGCCTAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LPASTRGKPCSAIRRASAAEENI*RSLCLE Trigger: CTCTAGGCACAAGGACCTTCATATATTCTCTTCTGC...GGCAGAAGCGCGTCGGATTGCAGAGCAAGGTTTCCCTCTAGTGGAAGCAGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR-3UTR GCA 90 bp | AGCTTGCTGTCACTGGTGGAGGCTGGATACTGTAGGGATGTGACCTACAGGGCAGACTCTGTCTTGAGCTaGCATCTGCTTCCATCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: SLLSLVEAGYCRDVTYRADSVLS*HLLPSS Trigger: GGAAGATGGAAGCAGATGGCAGCTCAAGACAGAGTC...TGCCCTGTAGGTCACATCCCTACAGTATCCAGCCTCCACCAGTGACAGCAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCTTGCTGTCACTGGTGGAGGCTGGATACTGTAGGGATGTGACCTACAGGGCAGTTATTTCCCAAGGTTaGGACAGCAGCCCTGAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: SLLSLVEAGYCRDVTYRAVISQG*DSSPEL Trigger: TAGCTCAGGGCTGCTGTCCCAACCTTGGGAAATAAC...TGCCCTGTAGGTCACATCCCTACAGTATCCAGCCTCCACCAGTGACAGCAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR-3UTR CCA 90 bp | GATGCAGTGGGAATTCTGATCCCACAGACCCCAGGAGAGGGCAACCGGTGTGCACTTAGACCCGATGTGTaGATGGCTTTTCTTTTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: DAVGILIPQTPGEGNRCALRPDV*MAFLLH Trigger: GTGCAAAAGAAAAGCCATCCACACATCGGGTCTAAG...TGCACACCGGTTGCCCTCTCCTGGGGTCTGTGGGATCAGAATTCCCACTGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR-3UTR TCA 90 bp | CGAGCAAATACAGGGAACCATGTGGTCAAGCAGGGCGTGAGGACCCAGAGGAAGGCAGAAGAGAATATATaGAGGTCCTTGTGCCTAGAG | + |
|
Preference number: 2 (lower is better) Translates to: RANTGNHVVKQGVRTQRKAEENI*RSLCLE Trigger: CTCTAGGCACAAGGACCTTCATATATTCTCTTCTGC...CTTCCTCTGGGTCCTCACGCCCTGCTTGACCACATGGTTCCCTGTATTTGCTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCCCTGCTTCCACTAGAGGGAAACCTTGCTCTGCAATCCGACGCGCTTCTGCCGCTATTTACATTTCATaGGTCCCAGTGCATCTGACT | + |
|
Preference number: 2 (lower is better) Translates to: LPASTRGKPCSAIRRASAAIYIS*VPVHLT Trigger: AGTCAGATGCACTGGGACTCATGAAATGTAAATAGC...GGCAGAAGCGCGTCGGATTGCAGAGCAAGGTTTCCCTCTAGTGGAAGCAGGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTAGAGTGGGTGCCACCTCCCCACTACCCCCAGTCAAATCACAAAGTCACACCCAACAACTCGAACACTaGGGTGTTATCAGACTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: SRVGATSPLPPVKSQSHTQQLEH*GVIRLL Trigger: CAGGAGTCTGATAACACCCCAGTGTTCGAGTTGTTG...GGTGTGACTTTGTGATTTGACTGGGGGTAGTGGGGAGGTGGCACCCACTCTACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCTTGCTGTCACTGGTGGAGGCTGGATACTGTAGGGATGTGACCTACAGGGCACCCCCAGGACTTGCTTaGGCAAGGCTATTTACATTT | + |
|
Preference number: 2 (lower is better) Translates to: SLLSLVEAGYCRDVTYRAPPGLA*ARLFTF Trigger: AAATGTAAATAGCCTTGCCCAAGCAAGTCCTGGGGG...TGCCCTGTAGGTCACATCCCTACAGTATCCAGCCTCCACCAGTGACAGCAAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR CAA 90 bp | GTCTCACGGTTCAAATGCAGTCCAGTCTCCAACGTCCCCCAGGACTaGCTTGGGCAAGGCTATTTACATTTCATGAGTCCCAGTGCATCT | + |
|
Preference number: 2 (lower is better) Translates to: VSRFKCSPVSNVPQD*LGQGYLHFMSPSAS Trigger: AGATGCACTGGGACTCATGAAATGTAAATAGCCTTGCCCAAGCAAGTCCTGGGGGACGTTGGAGACTGGACTGCATTTGAACCGTGAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTGTCACTCAGGAAAGTCCCACTCGAGTCTGGTTCATGTCACTAAACAAGCAATGGTCAAGCAGGGCGTaGGGACCCAGAGGAAGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: LVTQESPTRVWFMSLNKQWSSRA*GPRGSV Trigger: AACACTTCCTCTGGGTCCTCACGCCCTGCTTGACCA...TTGCTTGTTTAGTGACATGAACCAGACTCGAGTGGGACTTTCCTGAGTGACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR-3UTR CCA 90 bp | CCCATGCTTCAGTTTAAGCCAGGAAAGTCTAGAATCTTTCCAAGGGCTGAGATACATGCCCAGTATCCCTaGCACTGGCACTATCCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: PMLQFKPGKSRIFPRAEIHAQYP*HWHYPA Trigger: GGCAGGATAGTGCCAGTGCCAGGGATACTGGGCATG...TATCTCAGCCCTTGGAAAGATTCTAGACTTTCCTGGCTTAAACTGAAGCATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR CAA 90 bp | AGTGCATCTGACTATTCACAGGATTCTCGAGTGATATCCACGTGTTaGGCAATGGGTGGGAAGCCCAGACTCCACTGGGATGTCAAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: SASDYSQDSRVISTC*AMGGKPRLHWDVKK Trigger: TTTCTTGACATCCCAGTGGAGTCTGGGCTTCCCACCCATTGCCAAACACGTGGATATCACTCGAGAATCCTGTGAATAGTCAGATGCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR CAA 90 bp | GAACAAACAGAGCAACAGAAAGAAACACAGGAAGAACTAGACCCCTaGGCAGGTGTTCCAAAGGTACAACTCGTTCCCACACAGCCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: EQTEQQKETQEELDP*AGVPKVQLVPTQPW Trigger: CCAAGGCTGTGTGGGAACGAGTTGTACCTTTGGAACACCTGCCAAGGGGTCTAGTTCTTCCTGTGTTTCTTTCTGTTGCTCTGTTTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR CAA 90 bp | TGCTTGACTGGGCTTGGACTCTCTAGACTCTTGGCTTTGGCAAGGTaGGGGGAAATGACGGACTGGCCTGATTTCTATACTGTAGATAGT | + |
|
Preference number: 2 (lower is better) Translates to: CLTGLGLSRLLALAR*GEMTDWPDFYTVDS Trigger: ACTATCTACAGTATAGAAATCAGGCCAGTCCGTCATTTCCCCCAACCTTGCCAAAGCCAAGAGTCTAGAGAGTCCAAGCCCAGTCAAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGGTGCCACCTCCCCACTACCCCCAGTCAAATCACAAAGTCACACCCAACAATATTCAGTGTGTAGTTaGATAAGCATGCCCAGTATC | + |
|
Preference number: 2 (lower is better) Translates to: VGATSPLPPVKSQSHTQQYSVCS*ISMPSI Trigger: GATACTGGGCATGCTTATCCAACTACACACTGAATA...TTGTTGGGTGTGACTTTGTGATTTGACTGGGGGTAGTGGGGAGGTGGCACCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCTGGTTCATGTCACTAAACAAGCAATACAAATTACCATCTCCTTCCAACTCCGTGGGAGGGCACACTaGCCCATCAGTCCCCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SLVHVTKQAIQITISFQLRGRAH*PISPLS Trigger: AGAAAGGGGACTGATGGGTCAGTGTGCCCTCCCACG...GAGTTGGAAGGAGATGGTAATTTGTATTGCTTGTTTAGTGACATGAACCAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGGTGCCACCTCCCCACTACCCCCAGTCAAATCACAAAGTCACACCCAACAACCCCAATCTGAGAAATaGCAGAAGAGAATATATGAA | + |
|
Preference number: 2 (lower is better) Translates to: VGATSPLPPVKSQSHTQQPQSEK*QKRIYE Trigger: TTCATATATTCTCTTCTGCCATTTCTCAGATTGGGG...TTGTTGGGTGTGACTTTGTGATTTGACTGGGGGTAGTGGGGAGGTGGCACCCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCACCTCCCCACTACCCCCAGTCAAATCACAAAGTCACACCCAACAACTCGATATTCAGTGTGTAGTTaGATAAGCATGCCCAGTATC | + |
|
Preference number: 2 (lower is better) Translates to: CHLPTTPSQITKSHPTTRYSVCS*ISMPSI Trigger: GATACTGGGCATGCTTATCCAACTACACACTGAATA...TCGAGTTGTTGGGTGTGACTTTGTGATTTGACTGGGGGTAGTGGGGAGGTGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
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| 3UTR-3UTR TCA 90 bp | GTTAATTTAACAGACAAAAGCCAACGGCAACACCAAAACAGTAATCCACAACACTACAGCAGCCCAGCCTaGCAGGTCTTGGTGCCTATT | + |
|
Preference number: 2 (lower is better) Translates to: VNLTDKSQRQHQNSNPQHYSSPA*QVLVPI Trigger: AATAGGCACCAAGACCTGTCAGGCTGGGCTGCTGTA...GTGTTGTGGATTACTGTTTTGGTGTTGCCGTTGGCTTTTGTCTGTTAAATTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTATTCAGTGTGTAGTTGGATAAGCATGCCCAGTATCCCTGGCACTGGCACTCCCCAATCTGAGAAATaGCAGAAGAGAATATATGAA | + |
|
Preference number: 2 (lower is better) Translates to: AYSVCSWISMPSIPGTGTPQSEK*QKRIYE Trigger: TTCATATATTCTCTTCTGCCATTTCTCAGATTGGGG...AGTGCCAGTGCCAGGGATACTGGGCATGCTTATCCAACTACACACTGAATAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTCCAACCACAGAACAGACAGTCCCAGCTTTCTTCATGCAGGTCATTTACCATCAGTAAATGAACTCTaGTCACCTAGAACCAATGGC | + |
|
Preference number: 2 (lower is better) Translates to: LSNHRTDSPSFLHAGHLPSVNEL*SPRTNG Trigger: GCCATTGGTTCTAGGTGACCAGAGTTCATTTACTGA...TGGTAAATGACCTGCATGAAGAAAGCTGGGACTGTCTGTTCTGTGGTTGGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR-3UTR CCA 90 bp | CCCATGCTTCAGTTTAAGCCAGGAAAGTCTAGAATCTTTCCAAGGGCTGAGATAGATTCAGGAGGGCCATaGAGAAATACTGCTCTCATC | + |
|
Preference number: 2 (lower is better) Translates to: PMLQFKPGKSRIFPRAEIDSGGP*RNTALI Trigger: GATGAGAGCAGTATTTCTCCATGGCCCTCCTGAATC...TATCTCAGCCCTTGGAAAGATTCTAGACTTTCCTGGCTTAAACTGAAGCATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR-3UTR TCA 90 bp | GTTAATTTAACAGACAAAAGCCAACGGCAACACCAAAACAGTAATCCACAACACCAAGGTTGGGGGAAATaGCGGACTGGCCTGATTTCT | + |
|
Preference number: 2 (lower is better) Translates to: VNLTDKSQRQHQNSNPQHQGWGK*RTGLIS Trigger: AGAAATCAGGCCAGTCCGTCATTTCCCCCAACCTTG...GTGTTGTGGATTACTGTTTTGGTGTTGCCGTTGGCTTTTGTCTGTTAAATTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCATGTTGCTTTTTGGTCAGGGTATTTTACCACAGCAACAGAAATGGAGCTACTCATAGCCAGGGCATaGTCTTCTGAGTTATTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: VHVAFWSGYFTTATEMELLIARA*SSELFP Trigger: GGGAAATAACTCAGAAGACCATGCCCTGGCTATGAG...TAGCTCCATTTCTGTTGCTGTGGTAAAATACCCTGACCAAAAAGCAACATGCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTCCAACCACAGAACAGACAGTCCCAGCTTTCTTCATGCAGGTCATTTACCAAACCATGTAGCTAATTaGCTTCCTATGTCTCCTATA | + |
|
Preference number: 2 (lower is better) Translates to: LSNHRTDSPSFLHAGHLPNHVAN*LPMSPI Trigger: TATAGGAGACATAGGAAGCCAATTAGCTACATGGTT...TGGTAAATGACCTGCATGAAGAAAGCTGGGACTGTCTGTTCTGTGGTTGGAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR-3UTR CCA 90 bp | GTTAATTTAACAGACAAAAGCCAACGGCAACACCAAAACAGTAATCCACAACACCAGGACCACTCTGGTTaGGATTCATTGTGTCCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: VNLTDKSQRQHQNSNPQHQDHSG*DSLCPG Trigger: ACCAGGACACAATGAATCCCAACCAGAGTGGTCCTG...GTGTTGTGGATTACTGTTTTGGTGTTGCCGTTGGCTTTTGTCTGTTAAATTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR CAA 90 bp | AAACCAAACAAACCAACTTTCCTCTTTCCTGGTGCATGTTGCTTTTaGGTCAGGGTATTTTACCACAGCAACAGAAATGGAGCTACGACA | + |
|
Preference number: 2 (lower is better) Translates to: KPNKPTFLFPGACCF*VRVFYHSNRNGATT Trigger: TGTCGTAGCTCCATTTCTGTTGCTGTGGTAAAATACCCTGACCAAAAAGCAACATGCACCAGGAAAGAGGAAAGTTGGTTTGTTTGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR-3UTR GCA 90 bp | GTTAATTTAACAGACAAAAGCCAACGGCAACACCAAAACAGTAATCCACAACACTTTCCTGGTGCATGTTaGTTTTTGGTCAGGGTATTT | + |
|
Preference number: 2 (lower is better) Translates to: VNLTDKSQRQHQNSNPQHFPGAC*FLVRVF Trigger: AAATACCCTGACCAAAAAGCAACATGCACCAGGAAA...GTGTTGTGGATTACTGTTTTGGTGTTGCCGTTGGCTTTTGTCTGTTAAATTAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR CCA 72 bp | GGGCCGCTCTTGCCAGGCCTGTCATCACTAGCTCTGTaGGATGAAGGGCTGTGGGCGGACATCGTGGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: GPLLPGLSSLAL*DEGLWADIVGG Trigger: CCCTCCCACGATGTCCGCCCACAGCCCTTCATCCCACAGAGCTAGTGATGACAGGCCTGGCAAGAGCGGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR TCA 72 bp | GCTCTTGCCAGGCCTGTCATCACTAGCTCTGTGGGATaGAGGGCTGTGGGCGGACATCGTGGGAGGGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: ALARPVITSSVG*RAVGGHRGRAH Trigger: GTGTGCCCTCCCACGATGTCCGCCCACAGCCCTTCATCCCACAGAGCTAGTGATGACAGGCCTGGCAAGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR TCA 72 bp | ACTCCCCACAGGTTGCTCACAGAACAGCAGATGAACTaGGCTGAGCGGCACCTGGGCCACGCCCCCTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: TPHRLLTEQQMN*AERHLGHAPFG Trigger: CCCAAAGGGGGCGTGGCCCAGGTGCCGCTCAGCTCAGTTCATCTGCTGTTCTGTGAGCAACCTGTGGGGAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR GCA 72 bp | TGCCAGAGTCGCAGAAAAGCGTCAGGAAGAGGTCTCTaGCCCTCCCCCACACCAGCAGACCAATCCGGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: CQSRRKASGRGL*PSPTPADQSGA Trigger: GGCTCCGGATTGGTCTGCTGGTGTGGGGGAGGGGCAGAGACCTCTTCCTGACGCTTTTCTGCGACTCTGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR GCA 72 bp | GCTGCCAGCATCTTCCAAAACAAAAGAGCTCCCGGGTaGAAGGGAGCCAGCCCGGGAAGAGCCCGCGACTAC | + |
|
Preference number: 3 (lower is better) Translates to: AASIFQNKRAPG*KGASPGRARDY Trigger: GTAGTCGCGGGCTCTTCCCGGGCTGGCTCCCTTGCACCCGGGAGCTCTTTTGTTTTGGAAGATGCTGGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR GCA 72 bp | CCAAGAACACTTGTAATCTTTAGAATGGGCTGGCAATaGCTCCGTACCCCCGGGCCCCCACCCGCCCGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: PRTLVIFRMGWQ*LRTPGPPPARP Trigger: AGGGCGGGCGGGTGGGGGCCCGGGGGTACGGAGGCATTGCCAGCCCATTCTAAAGATTACAAGTGTTCTTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR TCA 72 bp | CCCTGGCACTGGCACTATCCTGCCTCTAGCCCAGTCTaGTGTTCTGGGCCTGTTCCTCCTGTGCGCTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: PWHWHYPASSPV*CSGPVPPVRSG Trigger: TCCAGAGCGCACAGGAGGAACAGGCCCAGAACATCAGACTGGGCTAGAGGCAGGATAGTGCCAGTGCCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
||
| 3UTR GCA 72 bp | ACACAGGTCAGGGCCACGGAGGCAGGGAGTAGACCGTaGCCTCATCACTTCCTTTGCTTCTCTCCAGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TQVRATEAGSRP*PHHFLCFSPGQ Trigger: CTGCCCTGGAGAGAAGCAAAGGAAGTGATGAGGGCACGGTCTACTCCCTGCCTCCGTGGCCCTGACCTGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR GCA 72 bp | AGCCAGGCAGCTCCGGGCACCGACTCTGTCTTGAGCTaGCATCTGCTTCCATCTTCCATTCGGGACCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SQAAPGTDSVLS*HLLPSSIRDLQ Trigger: CTGCAGGTCCCGAATGGAAGATGGAAGCAGATGGCAGCTCAAGACAGAGTCGGTGCCCGGAGCTGCCTGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR CCA 72 bp | GGCCTGTCATCACTAGCTCTGTGGGATGAAGGGCTGTaGGCGGACATCGTGGGAGGGCACACTGACCCATCA | + |
|
Preference number: 3 (lower is better) Translates to: GLSSLALWDEGL*ADIVGGHTDPS Trigger: TGATGGGTCAGTGTGCCCTCCCACGATGTCCGCCCACAGCCCTTCATCCCACAGAGCTAGTGATGACAGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR CCA 72 bp | TTGCTGGAAGGAAGGTCTTCAAAGCTGGCAGAAGGCTaGAGGAGAAGCGGGAGCCCTGCACTACCCCTGCGG | + |
|
Preference number: 3 (lower is better) Translates to: LLEGRSSKLAEG*RRSGSPALPLR Trigger: CCGCAGGGGTAGTGCAGGGCTCCCGCTTCTCCTCCAGCCTTCTGCCAGCTTTGAAGACCTTCCTTCCAGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR TCA 72 bp | GCAGTAGCTCTGGATAGGGGGATGCAGTGGGAATTCTaGTCCCACAGACCCCAGGAGAGGGCAACCGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: AVALDRGMQWEF*SHRPQERATGV Trigger: CACACCGGTTGCCCTCTCCTGGGGTCTGTGGGATCAGAATTCCCACTGCATCCCCCTATCCAGAGCTACTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR GCA 72 bp | TTGCTACCAGAGGTAGCCTCCTTGGGAGCAGTGATCTaGTGTGGAGAGAACCAAGCCTGGCCCCGTACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LLPEVASLGAVI*CGENQAWPRTP Trigger: TGGGGTACGGGGCCAGGCTTGGTTCTCTCCACAGCAGATCACTGCTCCCAAGGAGGCTACCTCTGGTAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR CCA 72 bp | ACCAGAGGTAGCCTCCTTGGGAGCAGTGATCTGCTGTaGAGAGAACCAAGCCTGGCCCCGTACCCCAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: TRGSLLGSSDLL*REPSLAPYPKT Trigger: TGTCTTGGGGTACGGGGCCAGGCTTGGTTCTCTCCACAGCAGATCACTGCTCCCAAGGAGGCTACCTCTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR CCA 72 bp | CAGTCTCCAAGAACACTTGTAATCTTTAGAATGGGCTaGCAATGCCTCCGTACCCCCGGGCCCCCACCCGCC | + |
|
Preference number: 3 (lower is better) Translates to: QSPRTLVIFRMG*QCLRTPGPPPA Trigger: GGCGGGTGGGGGCCCGGGGGTACGGAGGCATTGCCAGCCCATTCTAAAGATTACAAGTGTTCTTGGAGACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTTTGCTTCTCTCCAGGGCAGCCAGAGACTTGACCCAGGCAAGATTTGGCAGTGCCACCCAGGCAGCTTaGTCACTAAGGAGCCCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: PLLLSRAARDLTQARFGSATQAA*SLRSPG Trigger: ACCAGGGCTCCTTAGTGACAAAGCTGCCTGGGTGGC...ACTGCCAAATCTTGCCTGGGTCAAGTCTCTGGCTGCCCTGGAGAGAAGCAAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR CCA 72 bp | TCGTGGGAGGGCACACTGACCCATCAGTCCCCTTTCTaGTACAGCTTTGCTACCAGAGGTAGCCTCCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SWEGTLTHQSPF*YSFATRGSLLG Trigger: CCCAAGGAGGCTACCTCTGGTAGCAAAGCTGTACCAGAAAGGGGACTGATGGGTCAGTGTGCCCTCCCACGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR CCA 72 bp | AGCACAGGGAGTGAACCTCATCCCAGGGCTGGCAGATaGTATCCTGGCTCCCTGCTTCCACTAGAGGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: STGSEPHPRAGR*YPGSLLPLEGN Trigger: GTTTCCCTCTAGTGGAAGCAGGGAGCCAGGATACCATCTGCCAGCCCTGGGATGAGGTTCACTCCCTGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR TCA 72 bp | TCTGCCCCTGGCACTCATAGCCAGGGCATGGTCTTCTaGGTTATTTCCCAAGGTTGGGACAGCAGCCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SAPGTHSQGMVF*VISQGWDSSPE Trigger: CTCAGGGCTGCTGTCCCAACCTTGGGAAATAACTCAGAAGACCATGCCCTGGCTATGAGTGCCAGGGGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR CCA 72 bp | CGCTTCTGCCTGGGAGTAGGAGATGCAGTGGCCAGCTaGTTCTCTAAGTCCAAGCCCTCTCCAACCACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: RFCLGVGDAVAS*FSKSKPSPTTE Trigger: TTCTGTGGTTGGAGAGGGCTTGGACTTAGAGAACCAGCTGGCCACTGCATCTCCTACTCCCAGGCAGAAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR TCA 72 bp | AGTGGACGGCTCCTTTCTTTAGCCCTGGCCACACTGTaGCAGAGTTTCAGGCAGATGATGAGGGACCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: SGRLLSLALATL*QSFRQMMRDPL Trigger: CAGTGGGTCCCTCATCATCTGCCTGAAACTCTGTCACAGTGTGGCCAGGGCTAAAGAAAGGAGCCGTCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR TCA 72 bp | AGGGCAGGCGAGCCAGCCCAGAGTCAGGGCCAGAAATaGGTACATCATGGGACTCCATCTCTTCATGATGTC | + |
|
Preference number: 3 (lower is better) Translates to: RAGEPAQSQGQK*VHHGTPSLHDV Trigger: GACATCATGAAGAGATGGAGTCCCATGATGTACTCATTTCTGGCCCTGACTCTGGGCTGGCTCGCCTGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR CCA 72 bp | TGTCTATCGGCTGAGAATGGTTATGCTAATCAGGCCTaGCCCAGGGGGCTGATGCTTGGAGCTAGTAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: CLSAENGYANQA*PRGLMLGASST Trigger: GGTGCTACTAGCTCCAAGCATCAGCCCCCTGGGCCAGGCCTGATTAGCATAACCATTCTCAGCCGATAGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCTTGCTGTCACTGGTGGAGGCTGGATACTGTAGGGATGTGACCTACAGGGCACTTTCTGGTACAGCTTaGCTACCAGAGGTAGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SLLSLVEAGYCRDVTYRALSGTA*LPEVAS Trigger: GGAGGCTACCTCTGGTAGCAAAGCTGTACCAGAAAG...TGCCCTGTAGGTCACATCCCTACAGTATCCAGCCTCCACCAGTGACAGCAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR TCA 72 bp | CTTCGGAGGACGTTCATCATCCCTCCCTGTGACTTCTaGGAGGTATGTGTCTCAGGGAGAAGCCTCTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LRRTFIIPPCDF*EVCVSGRSLWS Trigger: AGACCAGAGGCTTCTCCCTGAGACACATACCTCTCAGAAGTCACAGGGAGGGATGATGAACGTCCTCCGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR GCA 72 bp | CCTGATGATGTCACTCTGCAGGTCTCACGGTTCAAATaGAGTCCAGTCTCCAACGTCCCCCAGGACTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PDDVTLQVSRFK*SPVSNVPQDLL Trigger: AAGCAAGTCCTGGGGGACGTTGGAGACTGGACTGCATTTGAACCGTGAGACCTGCAGAGTGACATCATCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR GCA 72 bp | AGGATCTGGCTCTGTACTGATCAGTCCCAGGTTTGCTaGTTAAAGGGGCACATGCCCCGCCAACAACTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: RIWLCTDQSQVC*LKGHMPRQQLQ Trigger: CTGAAGTTGTTGGCGGGGCATGTGCCCCTTTAAGCAGCAAACCTGGGACTGATCAGTACAGAGCCAGATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR GCA 72 bp | CCTGAGCACTTTAGCACTGAAAGAACGCTTGCTAACTaGAGAGCCTCCCTCACAGCACAGGGAGTGAACCTC | + |
|
Preference number: 3 (lower is better) Translates to: PEHFSTERTLAN*RASLTAQGVNL Trigger: GAGGTTCACTCCCTGTGCTGTGAGGGAGGCTCTGCAGTTAGCAAGCGTTCTTTCAGTGCTAAAGTGCTCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR CCA 72 bp | TGCTTTTCAAGAGCCTCCATCCACCAAGGCAGAAAGTaGACGGCTCCTTTCTTTAGCCCTGGCCACACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: CFSRASIHQGRK*TAPFFSPGHTV Trigger: CACAGTGTGGCCAGGGCTAAAGAAAGGAGCCGTCCACTTTCTGCCTTGGTGGATGGAGGCTCTTGAAAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR CCA 72 bp | GGTGGGTCATCTCATAGTGGCTTCCTGGCCGCAGTCTaGGGTCCTCAATGGTCCCTAAAATACACTACACAG | + |
|
Preference number: 3 (lower is better) Translates to: GGSSHSGFLAAV*GPQWSLKYTTQ Trigger: CTGTGTAGTGTATTTTAGGGACCATTGAGGACCCCAGACTGCGGCCAGGAAGCCACTATGAGATGACCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR CCA 72 bp | CCACTGTCCAAGATGACCTCCACATCCTCTACTACCTaGGCACAGAACTCTCTAGCAGGAGACAGAGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PLSKMTSTSSTT*AQNSLAGDRAP Trigger: AGGAGCTCTGTCTCCTGCTAGAGAGTTCTGTGCCCAGGTAGTAGAGGATGTGGAGGTCATCTTGGACAGTGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR TCA 72 bp | ACTGATCACCTGCATGTGACCTACAGCAGCCCAGCCTaGCAGGTCTTGGTGCCTATTCAGTGTGTAGTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: TDHLHVTYSSPA*QVLVPIQCVVG Trigger: TCCAACTACACACTGAATAGGCACCAAGACCTGTCAGGCTGGGCTGCTGTAGGTCACATGCAGGTGATCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
||
| 3UTR TCA 72 bp | TCTCATCCTTCGGAGGACGTTCATCATCCCTCCCTGTaGCTTCTGAGAGGTATGTGTCTCAGGGAGAAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SHPSEDVHHPSL*LLRGMCLREKP Trigger: AGGCTTCTCCCTGAGACACATACCTCTCAGAAGTCACAGGGAGGGATGATGAACGTCCTCCGAAGGATGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR CCA 72 bp | ATGCAGTCCAGTCTCCAACGTCCCCCAGGACTTGCTTaGGCAAGGCTATTTACATTTCATGAGTCCCAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: MQSSLQRPPGLA*ARLFTFHESQC Trigger: GCACTGGGACTCATGAAATGTAAATAGCCTTGCCCAAGCAAGTCCTGGGGGACGTTGGAGACTGGACTGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR CCA 72 bp | ACTGTAGTCACTCTGATGGGATGCACAGGACCACTCTaGTTGGGATTCATTGTGTCCTGGTGCATCGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: TVVTLMGCTGPL*LGFIVSWCIVG Trigger: TCCCACGATGCACCAGGACACAATGAATCCCAACCAGAGTGGTCCTGTGCATCCCATCAGAGTGACTACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCATGCTTCAGTTTAAGCCAGGAAAGTCTAGAATCTTTCCAAGGGCTGAGATAGCACAGTGGACGGAGTaGAGGAGGGGTGACTGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: PMLQFKPGKSRIFPRAEIAQWTE*RRGDWP Trigger: TGGCCAGTCACCCCTCCTCAACTCCGTCCACTGTGC...TATCTCAGCCCTTGGAAAGATTCTAGACTTTCCTGGCTTAAACTGAAGCATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCATGTTGCTTTTTGGTCAGGGTATTTTACCACAGCAACAGAAATGGAGCTACCTGTGGGGGCCGCTCTaGCCAGGCCTGTCATCACTA | + |
|
Preference number: 3 (lower is better) Translates to: CMLLFGQGILPQQQKWSYLWGPL*PGLSSL Trigger: TAGTGATGACAGGCCTGGCAAGAGCGGCCCCCACAG...GTAGCTCCATTTCTGTTGCTGTGGTAAAATACCCTGACCAAAAAGCAACATGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCTTGCTGTCACTGGTGGAGGCTGGATACTGTAGGGATGTGACCTACAGGGCACTTTCCTGGTGCATGTaGCTTTTTGGTCAGGGTATT | + |
|
Preference number: 3 (lower is better) Translates to: SLLSLVEAGYCRDVTYRALSWCM*LFGQGI Trigger: AATACCCTGACCAAAAAGCAACATGCACCAGGAAAG...TGCCCTGTAGGTCACATCCCTACAGTATCCAGCCTCCACCAGTGACAGCAAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR GCA 72 bp | CTTCAGGTCAAAGTCCCCAACCTGATGATGTCACTCTaGAGGTCTCACGGTTCAAATGCAGTCCAGTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LQVKVPNLMMSL*RSHGSNAVQSP Trigger: TGGAGACTGGACTGCATTTGAACCGTGAGACCTGCAGAGTGACATCATCAGGTTGGGGACTTTGACCTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR CCA 72 bp | GGATTCTCGAGTGATATCCACGTGTTTGGCAATGGGTaGGAAGCCCAGACTCCACTGGGATGTCAAGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: GFSSDIHVFGNG*EAQTPLGCQET Trigger: TGTTTCTTGACATCCCAGTGGAGTCTGGGCTTCCCACCCATTGCCAAACACGTGGATATCACTCGAGAATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR CCA 72 bp | GGTGTTCCAAAGGTACAACTCGTTCCCACACAGCCTTaGAAGAAACTGATGGATAGACACAGGGTAGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GVPKVQLVPTQP*KKLMDRHRVGQ Trigger: CTGCCCTACCCTGTGTCTATCCATCAGTTTCTTCCAAGGCTGTGTGGGAACGAGTTGTACCTTTGGAACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR CCA 72 bp | GTAGGCTACCTGGTCCTCTCTCTTGCTCCAGGGTCCTaGTTTGGTAGAAGGAATGGCCACTCTGATAACAAT | + |
|
Preference number: 3 (lower is better) Translates to: VGYLVLSLAPGS*FGRRNGHSDNN Trigger: ATTGTTATCAGAGTGGCCATTCCTTCTACCAAACCAGGACCCTGGAGCAAGAGAGAGGACCAGGTAGCCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCCAGCCCAGAGTCAGGGCCAGAAATGAGTACATCATGGGACTCCATCTCTTCGCAGCCATTCATAGCTaGGTCTGGTCATTTTGCATA | + |
|
Preference number: 3 (lower is better) Translates to: SQPRVRARNEYIMGLHLFAAIHS*VWSFCI Trigger: TATGCAAAATGACCAGACCAAGCTATGAATGGCTGC...GAAGAGATGGAGTCCCATGATGTACTCATTTCTGGCCCTGACTCTGGGCTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCTGCTTCCACTAGAGGGAAACCTTGCTCTGCAATCCGACGCGCTTCTGCCGGAGGATTATCTTATTaGTTTAATGGAAGTGAGACG | + |
|
Preference number: 3 (lower is better) Translates to: LPASTRGKPCSAIRRASAGGLSY*FNGSET Trigger: CGTCTCACTTCCATTAAACAAATAAGATAATCCTCC...GGCAGAAGCGCGTCGGATTGCAGAGCAAGGTTTCCCTCTAGTGGAAGCAGGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR GCA 72 bp | GGGACGAGAGACCATAGTAAATATATCCAAGAGGGCTaGTGGTCTGCAGCCATTCATAGCTTGGTCTGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: GTRDHSKYIQEG*WSAAIHSLVWS Trigger: TGACCAGACCAAGCTATGAATGGCTGCAGACCAGCAGCCCTCTTGGATATATTTACTATGGTCTCTCGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR GCA 72 bp | CCTGGTGCCACTAAGCGCTTTCTGGGTCCAAAGCCCTaGTTTCTAGATAGCTGGTGTTCAGTAAATGAACTC | + |
|
Preference number: 3 (lower is better) Translates to: PGATKRFLGPKP*FLDSWCSVNEL Trigger: GAGTTCATTTACTGAACACCAGCTATCTAGAAAGCAGGGCTTTGGACCCAGAAAGCGCTTAGTGGCACCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR CCA 72 bp | CATTCAGATACTAACAGTAGCATTCCAGAAGTAGAGTaGGTGCCACCTCCCCACTACCCCCAGTCAAATCAC | + |
|
Preference number: 3 (lower is better) Translates to: HSDTNSSIPEVE*VPPPHYPQSNH Trigger: GTGATTTGACTGGGGGTAGTGGGGAGGTGGCACCCACTCTACTTCTGGAATGCTACTGTTAGTATCTGAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR TCA 72 bp | ATGTTTGCTCTGCCTAGTAAGGATCTGGCTCTGTACTaGTCAGTCCCAGGTTTGCTGCTTAAAGGGGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: MFALPSKDLALY*SVPGLLLKGAH Trigger: ATGTGCCCCTTTAAGCAGCAAACCTGGGACTGATCAGTACAGAGCCAGATCCTTACTAGGCAGAGCAAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR TCA 72 bp | CACCTAGAACCAATGGCCTGCTTGGACTGTGAGGAGTaGATTAGCCACTGTCTATCGGCTGAGAATGGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: HLEPMACLDCEE*ISHCLSAENGY Trigger: ATAACCATTCTCAGCCGATAGACAGTGGCTAATTCACTCCTCACAGTCCAAGCAGGCCATTGGTTCTAGGTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCATGCTTCAGTTTAAGCCAGGAAAGTCTAGAATCTTTCCAAGGGCTGAGATAGGGATTTTTCTGGTCTaGGGGTTTCAGCCCACTCTA | + |
|
Preference number: 3 (lower is better) Translates to: PMLQFKPGKSRIFPRAEIGIFLV*GFQPTL Trigger: TAGAGTGGGCTGAAACCCCAAGACCAGAAAAATCCC...TATCTCAGCCCTTGGAAAGATTCTAGACTTTCCTGGCTTAAACTGAAGCATGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR TCA 72 bp | CCCAGGACTTGCTTGGGCAAGGCTATTTACATTTCATaGGTCCCAGTGCATCTGACTATTCACAGGATTCTC | + |
|
Preference number: 3 (lower is better) Translates to: PRTCLGKAIYIS*VPVHLTIHRIL Trigger: GAGAATCCTGTGAATAGTCAGATGCACTGGGACTCATGAAATGTAAATAGCCTTGCCCAAGCAAGTCCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR CCA 72 bp | GTCAAATCACAAAGTCACACCCAACAACTCGAACACTaGGGTGTTATCAGACTCCTGGGGGAACCTAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: VKSQSHTQQLEH*GVIRLLGEPKN Trigger: ATTCTTAGGTTCCCCCAGGAGTCTGATAACACCCCAGTGTTCGAGTTGTTGGGTGTGACTTTGTGATTTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
||
| 3UTR TCA 72 bp | GGGTCATACTCTGAGTGGAAGTATACACTGCCTCTGTaGGCATTCAGCTCTCAGAAACTAACAGGAAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GSYSEWKYTLPL*AFSSQKLTGRK Trigger: CTTTCTTCCTGTTAGTTTCTGAGAGCTGAATGCTCACAGAGGCAGTGTATACTTCCACTCAGAGTATGACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR GCA 72 bp | CTCCAACCACAGAACAGACAGTCCCAGCTTTCTTCATaGAGGTCATTTACCATCACTAAGGCCTTGCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: LQPQNRQSQLSS*RSFTITKALHF Trigger: AAAATGCAAGGCCTTAGTGATGGTAAATGACCTGCATGAAGAAAGCTGGGACTGTCTGTTCTGTGGTTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR CCA 72 bp | ACGAGAGACCATAGTAAATATATCCAAGAGGGCTGCTaGTCTGCAGCCATTCATAGCTTGGTCTGGTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: TRDHSKYIQEGC*SAAIHSLVWSF Trigger: AAATGACCAGACCAAGCTATGAATGGCTGCAGACCAGCAGCCCTCTTGGATATATTTACTATGGTCTCTCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR CCA 72 bp | ATGGAAGTGAGACGATCCACCCTGAATTTCGTGGGCTaGATCTTGGACTTTTTAAGAGTACATGAAACTGGT | + |
|
Preference number: 3 (lower is better) Translates to: MEVRRSTLNFVG*ILDFLRVHETG Trigger: ACCAGTTTCATGTACTCTTAAAAAGTCCAAGATCCAGCCCACGAAATTCAGGGTGGATCGTCTCACTTCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR TCA 72 bp | TTTCTCTTAATTTCATATCGGTACCTTCCCACTTCCTaGTGTTTGCTCTGCCTAGTAAGGATCTGGCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: FLLISYRYLPTS*CLLCLVRIWLC Trigger: ACAGAGCCAGATCCTTACTAGGCAGAGCAAACATCAGGAAGTGGGAAGGTACCGATATGAAATTAAGAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR CCA 72 bp | AACCAACTTTCCTCTTTCCTGGTGCATGTTGCTTTTTaGTCAGGGTATTTTACCACAGCAACAGAAATGGAG | + |
|
Preference number: 3 (lower is better) Translates to: NQLSSFLVHVAF*SGYFTTATEME Trigger: CTCCATTTCTGTTGCTGTGGTAAAATACCCTGACCAAAAAGCAACATGCACCAGGAAAGAGGAAAGTTGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR CCA 72 bp | ACTTCTAGTTCCTGCCATCATGACTCCTCCCTACGATaGACTGTACATAGGCTAGATTATAAACCAAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: TSSSCHHDSSLR*TVHRLDYKPNK Trigger: TTTGTTTGGTTTATAATCTAGCCTATGTACAGTCCATCGTAGGGAGGAGTCATGATGGCAGGAACTAGAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCAGGGAAGTCTTAAAGAGGAATTATTTTAGATTAGATTGGCCTGTGGAGGATTTTGTTTCTCTGCTGTaGACTGTGGATGTAGTGACT | + |
|
Preference number: 3 (lower is better) Translates to: TREVLKRNYFRLDWPVEDFVSLL*TVDVVT Trigger: AGTCACTACATCCACAGTCAACAGCAGAGAAACAAA...ATCCTCCACAGGCCAATCTAATCTAAAATAATTCCTCTTTAAGACTTCCCTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| 3UTR GCA 72 bp | TTTCTTCATGCAGGTCATTTACCATCACTAAGGCCTTaGATTTTTAATCTTAAGGTCAAAGGAACACTCATT | + |
|
Preference number: 3 (lower is better) Translates to: FLHAGHLPSLRP*IFNLKVKGTLI Trigger: AATGAGTGTTCCTTTGACCTTAAGATTAAAAATGCAAGGCCTTAGTGATGGTAAATGACCTGCATGAAGAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| CDS-3UTR GCA 90 bp | CTTGTGCCTAGAGCCACCTGGCGTGGCCCTCACAGGACCCTGGACTTCCCCCGCTTCTTCTCGCGAACCTaGACGACCACCCCGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LVPRATWRGPHRTLDFPRFFSRT*TTTPLD Trigger: GTCCAGCGGGGTGGTCGTGCAGGTTCGCGAGAAGAA...GCGGGGGAAGTCCAGGGTCCTGTGAGGGCCACGCCAGGTGGCTCTAGGCACAAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
||
| CDS-3UTR TCA 90 bp | CCCCACCCTGACACTGCCCCTGGGAGACCACCGAGCAAATACAGGGAACCATGTATGGCCGTGAGCACCTaGATGAGGGCCGCAGCGATA | + |
|
Preference number: 4 (lower is better) Translates to: PHPDTAPGRPPSKYREPCMAVST*MRAAAI Trigger: TATCGCTGCGGCCCTCATTCAGGTGCTCACGGCCAT...ACATGGTTCCCTGTATTTGCTCGGTGGTCTCCCAGGGGCAGTGTCAGGGTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
||
| 3UTR CAA 72 bp | CCCATGAGCCAGGCAGCTCCGGGCACCGACTCTGTCTaGAGCTGCCATCTGCTTCCATCTTCCATTCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PMSQAAPGTDSV*SCHLLPSSIRD Trigger: GTCCCGAATGGAAGATGGAAGCAGATGGCAGCTCAAGACAGAGTCGGTGCCCGGAGCTGCCTGGCTCATGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
||
| CDS-3UTR TCA 90 bp | ACACTAGGCTATCACCTGGCCTTTCCACACTGGCAACCCCACCCTGACACTGCCATGGCCGTGAGCACCTaGATGAGGGCCGCAGCGATA | + |
|
Preference number: 4 (lower is better) Translates to: TLGYHLAFPHWQPHPDTAMAVST*MRAAAI Trigger: TATCGCTGCGGCCCTCATTCAGGTGCTCACGGCCAT...GGCAGTGTCAGGGTGGGGTTGCCAGTGTGGAAAGGCCAGGTGATAGCCTAGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
||
| CDS-3UTR GCA 90 bp | AACCATGTGGTCAAGCAGGGCGTGAGGACCCAGAGGAAGTGTTCCGTGAAGTCCCGGGAGGTCGGTGCGTaGCCCACACAGCACAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NHVVKQGVRTQRKCSVKSREVGA*PTQHSE Trigger: TTCACTGTGCTGTGTGGGGCACGCACCGACCTCCCG...GGACTTCACGGAACACTTCCTCTGGGTCCTCACGCCCTGCTTGACCACATGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
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| CDS-3UTR GCA 90 bp | CTCCCAGTGGGGCTGTGCTTGACTGGGCTTGGACTCTCTAGACTCTTGGCTTTGAAGACGCAGCACACGTaGCTGTCCGGGAGGTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPVGLCLTGLGLSRLLALKTQHT*LSGRSV Trigger: CACCGACCTCCCGGACAGGCACGTGTGCTGCGTCTT...CAAAGCCAAGAGTCTAGAGAGTCCAAGCCCAGTCAAGCACAGCCCCACTGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR CAA 72 bp | GGGACAGCAGCCCTGAGCTATGCCACCCAGGCAGCTTaGTCACTAAGGAGCCCTGGTGCCACTAAGCGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GTAALSYATQAA*SLRSPGATKRF Trigger: AAAGCGCTTAGTGGCACCAGGGCTCCTTAGTGACAAAGCTGCCTGGGTGGCATAGCTCAGGGCTGCTGTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| CDS-3UTR TCA 90 bp | ACAGGGAACCATGTGGTCAAGCAGGGCGTGAGGACCCAGAGGAAGTGTTCCGTGCCCCACACAGCACAGTaGATGCCGAGACGAATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TGNHVVKQGVRTQRKCSVPHTAQ*MPRRMY Trigger: GTACATTCGTCTCGGCATTCACTGTGCTGTGTGGGG...CACGGAACACTTCCTCTGGGTCCTCACGCCCTGCTTGACCACATGGTTCCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
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| CDS-3UTR TCA 90 bp | AACCATGTGGTCAAGCAGGGCGTGAGGACCCAGAGGAAGTGTTCCGTGAAGTCCGGGAGATGGCAAGGATaGCCATGTCCATGCCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NHVVKQGVRTQRKCSVKSGRWQG*PCPCPR Trigger: TCTGGGGCATGGACATGGTCATCCTTGCCATCTCCC...GGACTTCACGGAACACTTCCTCTGGGTCCTCACGCCCTGCTTGACCACATGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| CDS-3UTR GCA 90 bp | GTAGGAGATGCAGTGGCCAGCTGGTTCTCTAAGTCCAAGCCCTCTCCAACCACATTCTTCTCGCGAACCTaGACGACCACCCCGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VGDAVASWFSKSKPSPTTFFSRT*TTTPLD Trigger: GTCCAGCGGGGTGGTCGTGCAGGTTCGCGAGAAGAA...TGTGGTTGGAGAGGGCTTGGACTTAGAGAACCAGCTGGCCACTGCATCTCCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| CDS-3UTR GCA 90 bp | GCCTATTCAGTGTGTAGTTGGATAAGCATGCCCAGTATCCCTGGCACTGGCACTTGTCCGGGAGGTCGGTaGGTGCCCCACACAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: AYSVCSWISMPSIPGTGTCPGGR*VPHTAQ Trigger: CTGTGCTGTGTGGGGCACGCACCGACCTCCCGGACA...AGTGCCAGTGCCAGGGATACTGGGCATGCTTATCCAACTACACACTGAATAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
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| CDS-3UTR GCA 90 bp | GAAGTGTTCCGTGAAGTCCTGACGCCTAGGAGAGTGACTGATCACCTGCATGTGAAGACGCAGCACACGTaGCTGTCCGGGAGGTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EVFREVLTPRRVTDHLHVKTQHT*LSGRSV Trigger: CACCGACCTCCCGGACAGGCACGTGTGCTGCGTCTT...CACATGCAGGTGATCAGTCACTCTCCTAGGCGTCAGGACTTCACGGAACACTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
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| 3UTR CAA 72 bp | CCAGGAAGAGTCTGGGCTCTCCCAGTGGGGCTGTGCTaGACTGGGCTTGGACTCTCTAGACTCTTGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PGRVWALPVGLC*TGLGLSRLLAL Trigger: CAAAGCCAAGAGTCTAGAGAGTCCAAGCCCAGTCAAGCACAGCCCCACTGGGAGAGCCCAGACTCTTCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR CAA 72 bp | GGGCTGTGCTTGACTGGGCTTGGACTCTCTAGACTCTaGGCTTTGGCAAGGTTGGGGGAAATGACGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLCLTGLGLSRL*ALARLGEMTDW Trigger: CCAGTCCGTCATTTCCCCCAACCTTGCCAAAGCCAAGAGTCTAGAGAGTCCAAGCCCAGTCAAGCACAGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR CAA 72 bp | GCTCAGGACCTGAGCACTTTAGCACTGAAAGAACGCTaGCTAACTGCAGAGCCTCCCTCACAGCACAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AQDLSTLALKER*LTAEPPSQHRE Trigger: CTCCCTGTGCTGTGAGGGAGGCTCTGCAGTTAGCAAGCGTTCTTTCAGTGCTAAAGTGCTCAGGTCCTGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR CAA 72 bp | CTTTCTGGTACAGCTTTGCTACCAGAGGTAGCCTCCTaGGGAGCAGTGATCTGCTGTGGAGAGAACCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSGTALLPEVAS*GAVICCGENQA Trigger: GGCTTGGTTCTCTCCACAGCAGATCACTGCTCCCAAGGAGGCTACCTCTGGTAGCAAAGCTGTACCAGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| CDS-3UTR GCA 90 bp | GTGGGTGCCACCTCCCCACTACCCCCAGTCAAATCACAAAGTCACACCCAACAAACACAGCACAGTGAATaGCGAGACGAATGTACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VGATSPLPPVKSQSHTQQTQHSE*RDECTQ Trigger: TTGGGTACATTCGTCTCGGCATTCACTGTGCTGTGT...TTGTTGGGTGTGACTTTGTGATTTGACTGGGGGTAGTGGGGAGGTGGCACCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
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| 3UTR CAA 72 bp | GACTATTCACAGGATTCTCGAGTGATATCCACGTGTTaGGCAATGGGTGGGAAGCCCAGACTCCACTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: DYSQDSRVISTC*AMGGKPRLHWD Trigger: ATCCCAGTGGAGTCTGGGCTTCCCACCCATTGCCAAACACGTGGATATCACTCGAGAATCCTGTGAATAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR CAA 72 bp | GGGCTTGGACTCTCTAGACTCTTGGCTTTGGCAAGGTaGGGGGAAATGACGGACTGGCCTGATTTCTATACT | + |
|
Preference number: 4 (lower is better) Translates to: GLGLSRLLALAR*GEMTDWPDFYT Trigger: AGTATAGAAATCAGGCCAGTCCGTCATTTCCCCCAACCTTGCCAAAGCCAAGAGTCTAGAGAGTCCAAGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| CDS-3UTR GCA 90 bp | ACCAGGGAAGTCTTAAAGAGGAATTATTTTAGATTAGATTGGCCTGTGGAGGATTGTCCGGGAGGTCGGTaGGTGCCCCACACAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TREVLKRNYFRLDWPVEDCPGGR*VPHTAQ Trigger: CTGTGCTGTGTGGGGCACGCACCGACCTCCCGGACA...ATCCTCCACAGGCCAATCTAATCTAAAATAATTCCTCTTTAAGACTTCCCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR CAA 72 bp | TTCAAATGCAGTCCAGTCTCCAACGTCCCCCAGGACTaGCTTGGGCAAGGCTATTTACATTTCATGAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FKCSPVSNVPQD*LGQGYLHFMSP Trigger: GGGACTCATGAAATGTAAATAGCCTTGCCCAAGCAAGTCCTGGGGGACGTTGGAGACTGGACTGCATTTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR CAA 72 bp | GAGCAACAGAAAGAAACACAGGAAGAACTAGACCCCTaGGCAGGTGTTCCAAAGGTACAACTCGTTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: EQQKETQEELDP*AGVPKVQLVPT Trigger: TGTGGGAACGAGTTGTACCTTTGGAACACCTGCCAAGGGGTCTAGTTCTTCCTGTGTTTCTTTCTGTTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR CAA 72 bp | GTGAGACGATCCACCCTGAATTTCGTGGGCTGGATCTaGGACTTTTTAAGAGTACATGAAACTGGTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VRRSTLNFVGWI*DFLRVHETGWG Trigger: CCCCCAACCAGTTTCATGTACTCTTAAAAAGTCCAAGATCCAGCCCACGAAATTCAGGGTGGATCGTCTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| CDS-3UTR TCA 90 bp | AGTCTGGTTCATGTCACTAAACAAGCAATACAAATTACCATCTCCTTCCAACTCCCCCACACAGCACAGTaGATGCCGAGACGAATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SLVHVTKQAIQITISFQLPHTAQ*MPRRMY Trigger: GTACATTCGTCTCGGCATTCACTGTGCTGTGTGGGG...GAGTTGGAAGGAGATGGTAATTTGTATTGCTTGTTTAGTGACATGAACCAGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| CDS-3UTR GCA 90 bp | GCTGCTGGTCTGCAGCCATTCATAGCTTGGTCTGGTCATTTTGCATATAAACATACACAGCACAGTGAATaGCGAGACGAATGTACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AAGLQPFIAWSGHFAYKHTQHSE*RDECTQ Trigger: TTGGGTACATTCGTCTCGGCATTCACTGTGCTGTGT...ATGTTTATATGCAAAATGACCAGACCAAGCTATGAATGGCTGCAGACCAGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| 3UTR CAA 72 bp | AAACCAACTTTCCTCTTTCCTGGTGCATGTTGCTTTTaGGTCAGGGTATTTTACCACAGCAACAGAAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: KPTFLFPGACCF*VRVFYHSNRNG Trigger: TCCATTTCTGTTGCTGTGGTAAAATACCCTGACCAAAAAGCAACATGCACCAGGAAAGAGGAAAGTTGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136521.2 |
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| CDS GCA 90 bp | CAGCCAGAAGACGCAGCACACGTGCCTGTCCGGGAGGTCGGTGCGTaGCCCACACAGCACAGTGAATGCCGAGACGAATGTACCCAATCC | + |
|
Preference number: 5 (lower is better) Translates to: QPEDAAHVPVREVGA*PTQHSECRDECTQS Trigger: GGATTGGGTACATTCGTCTCGGCATTCACTGTGCTGTGTGGGGCACGCACCGACCTCCCGGACAGGCACGTGTGCTGCGTCTTCTGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000136521.2 ENSMUST00000179826.2 ENSMUST00000211561.2 |
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| CDS-3UTR CAA 90 bp | CTTGTGCCTAGAGCCACCTGGCGTGGCCCTCACAGGACCCTGGACTTCCCCCGCCCCGGCACGAAAGTGTaGAGGAAGAGACAGATGACA | + |
|
Preference number: 5 (lower is better) Translates to: LVPRATWRGPHRTLDFPRPGTKV*RKRQMT Trigger: TGTCATCTGTCTCTTCCTCAACACTTTCGTGCCGGG...GCGGGGGAAGTCCAGGGTCCTGTGAGGGCCACGCCAGGTGGCTCTAGGCACAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
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| CDS TCA 90 bp | AAGATGCTCATGATCCAGCCCACCATAACGATGGCCGTGAGCACCTaGATGAGGGCCGCAGCGATATTCAGCCAGAAGACGCAGCACACG | + |
|
Preference number: 5 (lower is better) Translates to: KMLMIQPTITMAVST*MRAAAIFSQKTQHT Trigger: CGTGTGCTGCGTCTTCTGGCTGAATATCGCTGCGGCCCTCATTCAGGTGCTCACGGCCATCGTTATGGTGGGCTGGATCATGAGCATCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000136521.2 ENSMUST00000179826.2 ENSMUST00000211561.2 |
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| CDS-3UTR CAA 90 bp | CCAGAGGAAGTGTTCCGTGAAGTCCTGACGCCTAGGAGAGTGACTGATCACCTGCCCGGCACGAAAGTGTaGAGGAAGAGACAGATGACA | + |
|
Preference number: 5 (lower is better) Translates to: PEEVFREVLTPRRVTDHLPGTKV*RKRQMT Trigger: TGTCATCTGTCTCTTCCTCAACACTTTCGTGCCGGG...CAGGTGATCAGTCACTCTCCTAGGCGTCAGGACTTCACGGAACACTTCCTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136521.2 ENSMUST00000211561.2 |
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| CDS GCA 72 bp | GCCGCAGCGATATTCAGCCAGAAGACGCAGCACACGTaGCTGTCCGGGAGGTCGGTGCGTGCCCCACACAGC | + |
|
Preference number: 6 (lower is better) Translates to: AAAIFSQKTQHT*LSGRSVRAPHS Trigger: GCTGTGTGGGGCACGCACCGACCTCCCGGACAGGCACGTGTGCTGCGTCTTCTGGCTGAATATCGCTGCGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000136521.2 ENSMUST00000179826.2 ENSMUST00000211561.2 |
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| CDS GCA 72 bp | GACGCAGCACACGTGCCTGTCCGGGAGGTCGGTGCGTaGCCCACACAGCACAGTGAATGCCGAGACGAATGT | + |
|
Preference number: 6 (lower is better) Translates to: DAAHVPVREVGA*PTQHSECRDEC Trigger: ACATTCGTCTCGGCATTCACTGTGCTGTGTGGGGCACGCACCGACCTCCCGGACAGGCACGTGTGCTGCGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000136521.2 ENSMUST00000179826.2 ENSMUST00000211561.2 |
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| CDS TCA 72 bp | TGTCCGGGAGGTCGGTGCGTGCCCCACACAGCACAGTaGATGCCGAGACGAATGTACCCAATCCCGGCACGA | + |
|
Preference number: 6 (lower is better) Translates to: CPGGRCVPHTAQ*MPRRMYPIPAR Trigger: TCGTGCCGGGATTGGGTACATTCGTCTCGGCATTCACTGTGCTGTGTGGGGCACGCACCGACCTCCCGGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000136521.2 ENSMUST00000179826.2 ENSMUST00000211561.2 |
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| CDS GCA 72 bp | CGGGAGGTCGGTGCGTGCCCCACACAGCACAGTGAATaGCGAGACGAATGTACCCAATCCCGGCACGAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: REVGACPTQHSE*RDECTQSRHES Trigger: ACTTTCGTGCCGGGATTGGGTACATTCGTCTCGGCATTCACTGTGCTGTGTGGGGCACGCACCGACCTCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000136521.2 ENSMUST00000179826.2 ENSMUST00000211561.2 |
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| CDS CAA 72 bp | GCCGAGACGAATGTACCCAATCCCGGCACGAAAGTGTaGAGGAAGAGACAGATGACAGCCACCGGGAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AETNVPNPGTKV*RKRQMTATGKG Trigger: GCCCTTCCCGGTGGCTGTCATCTGTCTCTTCCTCAACACTTTCGTGCCGGGATTGGGTACATTCGTCTCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000136521.2 ENSMUST00000179826.2 ENSMUST00000211561.2 |
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| CDS TCA 72 bp | ATGATCCAGCCCACCATAACGATGGCCGTGAGCACCTaGATGAGGGCCGCAGCGATATTCAGCCAGAAGACG | + |
|
Preference number: 6 (lower is better) Translates to: MIQPTITMAVST*MRAAAIFSQKT Trigger: CGTCTTCTGGCTGAATATCGCTGCGGCCCTCATTCAGGTGCTCACGGCCATCGTTATGGTGGGCTGGATCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000136521.2 ENSMUST00000179826.2 ENSMUST00000211561.2 |
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| CDS CAA 72 bp | TCACAGCTGTTGTGGGATACCCTGATCCTTGTACCCTaGCTCACTGGCAAGGATGACCATGTCCATGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SQLLWDTLILVP*LTGKDDHVHAP Trigger: TGGGGCATGGACATGGTCATCCTTGCCAGTGAGCAAGGGTACAAGGATCAGGGTATCCCACAACAGCTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179826.2 |
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