Pregenerated sensors for STUB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039615Ensembl transcript IDs: ENSMUST00000044911.10, ENSMUST00000236361.2, ENSMUST00000236515.2, ENSMUST00000237186.2
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGACTaGAGCTTCCGTCTCCAGATCCTCCTGGGCCAGGGTGCCAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: QGRWGQAQGHKLYRD*SFRLQILLGQGARQ Trigger: CTGCCTGGCACCCTGGCCCAGGAGGATCTGGAGACGGAAGCTCCAGTCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| 3UTR CCA 90 bp | CCAGTGTCTTCATTTCTACCTTCCTTGGCTAGCCAGACAGGCAACTaGCAAGCCCACTGCACCAGCACATGCCAATGTAGTGCTCACAGA | + |
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Preference number: 1 (lower is better) Translates to: PVSSFLPSLASQTGN*QAHCTSTCQCSAHR Trigger: TCTGTGAGCACTACATTGGCATGTGCTGGTGCAGTGGGCTTGCCAGTTGCCTGTCTGGCTAGCCAAGGAAGGTAGAAATGAAGACACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044911.10 |
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| 3UTR CCA 90 bp | TGCCACACTCAATCTGGACACCAGTGTCTTCATTTCTACCTTCCTTaGCTAGCCAGACAGGCAACTGGCAAGCCCACTGCACCAGCACAT | + |
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Preference number: 1 (lower is better) Translates to: CHTQSGHQCLHFYLP*LARQATGKPTAPAH Trigger: ATGTGCTGGTGCAGTGGGCTTGCCAGTTGCCTGTCTGGCTAGCCAAGGAAGGTAGAAATGAAGACACTGGTGTCCAGATTGAGTGTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044911.10 |
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| 3UTR GCA 90 bp | TTTCTACCTTCCTTGGCTAGCCAGACAGGCAACTGGCAAGCCCACTaGACCAGCACATGCCAATGTAGTGCTCACAGACTTTATTACAGG | + |
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Preference number: 1 (lower is better) Translates to: FLPSLASQTGNWQAH*TSTCQCSAHRLYYR Trigger: CCTGTAATAAAGTCTGTGAGCACTACATTGGCATGTGCTGGTGCAGTGGGCTTGCCAGTTGCCTGTCTGGCTAGCCAAGGAAGGTAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044911.10 |
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| 3UTR-3UTR GCA 90 bp | GGGGAGCAGTTCAGAACCCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGACACCCTCCTGGGCCAGGGTaGCAGGCAGGACATGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: GEQFRTHQQGRWGQAQGHPPGPG*QAGHGA Trigger: GGCCCCATGTCCTGCCTGGCACCCTGGCCCAGGAGG...GTGTCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGGGTTCTGAACTGCTCCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGAGCAGTTCAGAACCCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGACACGTCTCCAGATCCTCCTaGGCCAGGGTGCCAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: GEQFRTHQQGRWGQAQGHVSRSS*ARVPGR Trigger: CCTGCCTGGCACCCTGGCCCAGGAGGATCTGGAGAC...GTGTCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGGGTTCTGAACTGCTCCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| 3UTR-3UTR GCA 90 bp | GCCGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGACTGGAGCTTCCGTCCCTCCTGGGCCAGGGTaGCAGGCAGGACATGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: ADGGRPRDTNYTGTGASVPPGPG*QAGHGA Trigger: GGCCCCATGTCCTGCCTGGCACCCTGGCCCAGGAGG...GACGGAAGCTCCAGTCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCAGAACCCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATACCTCCTGGGCCAGGGTaGCAGGCAGGACATGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: VQNPSAGPMGAGPGTQTIPPGPG*QAGHGA Trigger: GGCCCCATGTCCTGCCTGGCACCCTGGCCCAGGAGG...TATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGGGTTCTGAAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| 3UTR-3UTR CCA 90 bp | AGAACCCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGTCTCCAGATCCTCCTaGGCCAGGGTGCCAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: RTHQQGRWGQAQGHKLYRVSRSS*ARVPGR Trigger: CCTGCCTGGCACCCTGGCCCAGGAGGATCTGGAGAC...CCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGGGTTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAGAACCCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATACGTCTCCAGATCCTCCTaGGCCAGGGTGCCAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: FRTHQQGRWGQAQGHKLYVSRSS*ARVPGR Trigger: CCTGCCTGGCACCCTGGCCCAGGAGGATCTGGAGAC...GTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGGGTTCTGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| 3UTR-3UTR GCA 90 bp | TATTTTCCTGATCGGTGGTGGCATGCCACACTCAATCTGGACACCAGTGTCTTCCCTCCTGGGCCAGGGTaGCAGGCAGGACATGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: YFPDRWWHATLNLDTSVFPPGPG*QAGHGA Trigger: GGCCCCATGTCCTGCCTGGCACCCTGGCCCAGGAGG...GAAGACACTGGTGTCCAGATTGAGTGTGGCATGCCACCACCGATCAGGAAAATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044911.10 |
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| 3UTR CAA 90 bp | ATGCCACACTCAATCTGGACACCAGTGTCTTCATTTCTACCTTCCTaGGCTAGCCAGACAGGCAACTGGCAAGCCCACTGCACCAGCACA | + |
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Preference number: 2 (lower is better) Translates to: MPHSIWTPVSSFLPS*ASQTGNWQAHCTST Trigger: TGTGCTGGTGCAGTGGGCTTGCCAGTTGCCTGTCTGGCTAGCCAAGGAAGGTAGAAATGAAGACACTGGTGTCCAGATTGAGTGTGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044911.10 |
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| 3UTR CCA 72 bp | TGGGGGCAGGCCCAGGGACACAAACTATACAGGGACTaGAGCTTCCGTCTCCAGATCCTCCTGGGCCAGGGT | + |
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Preference number: 3 (lower is better) Translates to: WGQAQGHKLYRD*SFRLQILLGQG Trigger: ACCCTGGCCCAGGAGGATCTGGAGACGGAAGCTCCAGTCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| 3UTR GCA 72 bp | TCCTTGGCTAGCCAGACAGGCAACTGGCAAGCCCACTaGACCAGCACATGCCAATGTAGTGCTCACAGACTT | + |
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Preference number: 3 (lower is better) Translates to: SLASQTGNWQAH*TSTCQCSAHRL Trigger: AAGTCTGTGAGCACTACATTGGCATGTGCTGGTGCAGTGGGCTTGCCAGTTGCCTGTCTGGCTAGCCAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044911.10 |
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| 3UTR CCA 72 bp | CAATCTGGACACCAGTGTCTTCATTTCTACCTTCCTTaGCTAGCCAGACAGGCAACTGGCAAGCCCACTGCA | + |
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Preference number: 3 (lower is better) Translates to: QSGHQCLHFYLP*LARQATGKPTA Trigger: TGCAGTGGGCTTGCCAGTTGCCTGTCTGGCTAGCCAAGGAAGGTAGAAATGAAGACACTGGTGTCCAGATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044911.10 |
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| CDS-3UTR GCA 90 bp | CTATACAGGGACTGGAGCTTCCGTCTCCAGATCCTCCTGGGCCAGGGTGCCAGGCCGCCTCCGGGTACTTaGGGCCCACGAAGAGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: LYRDWSFRLQILLGQGARPPPGT*GPRRAG Trigger: ACCGGCTCTTCGTGGGCCGCAAGTACCCGGAGGCGG...CCTGGCACCCTGGCCCAGGAGGATCTGGAGACGGAAGCTCCAGTCCCTGTATAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044911.10 |
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| CDS-3UTR GCA 90 bp | GAAGGGGAGCAGTTCAGAACCCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGATGCGCCTTCACAGACTaGCCGTCCAGCTCCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: EGEQFRTHQQGRWGQAQGCAFTD*PSSSRA Trigger: AGCCCTGGAGCTGGACGGGCAGTCTGTGAAGGCGCA...TCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGGGTTCTGAACTGCTCCCCTTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR CCA 90 bp | AGGGACTGGAGCTTCCGTCTCCAGATCCTCCTGGGCCAGGGTGCCAGGCAGGACGGGATGAGCTGTTCCTaGGTCAGAGGGCTCCGGGTC | + |
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Preference number: 4 (lower is better) Translates to: RDWSFRLQILLGQGARQDGMSCS*VRGLRV Trigger: GACCCGGAGCCCTCTGACCCAGGAACAGCTCATCCC...GTCCTGCCTGGCACCCTGGCCCAGGAGGATCTGGAGACGGAAGCTCCAGTCCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR GCA 90 bp | GAAGGGGAGCAGTTCAGAACCCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGAATCTCCAGCTGGCACTaGCCCAGGAAGAAGTGCGCC | + |
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Preference number: 4 (lower is better) Translates to: EGEQFRTHQQGRWGQAQGISSWH*PRKKCA Trigger: GGCGCACTTCTTCCTGGGGCAGTGCCAGCTGGAGAT...TCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGGGTTCTGAACTGCTCCCCTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR GCA 90 bp | GAACCCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGGCCTCAATGCAGGCCTaGTGGGCCCGGATGTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: EPISRADGGRPRDTNYTGASMQA*WARMWP Trigger: TGGCCACATCCGGGCCCAGCAGGCCTGCATTGAGGC...CCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGGGTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR TCA 90 bp | AGGGACTGGAGCTTCCGTCTCCAGATCCTCCTGGGCCAGGGTGCCAGGCAGGACTGGCCAAGTTGGGGATaGGCTGTTCCTGGGTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: RDWSFRLQILLGQGARQDWPSWG*AVPGSE Trigger: CTCTGACCCAGGAACAGCTCATCCCCAACTTGGCCA...GTCCTGCCTGGCACCCTGGCCCAGGAGGATCTGGAGACGGAAGCTCCAGTCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR TCA 90 bp | GGGACTGGAGCTTCCGTCTCCAGATCCTCCTGGGCCAGGGTGCCAGGCAGGACATGGCCAAGTTGGGGATaGGCTGTTCCTGGGTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: GTGASVSRSSWARVPGRTWPSWG*AVPGSE Trigger: CTCTGACCCAGGAACAGCTCATCCCCAACTTGGCCA...TGTCCTGCCTGGCACCCTGGCCCAGGAGGATCTGGAGACGGAAGCTCCAGTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR GCA 90 bp | TATACAGGGACTGGAGCTTCCGTCTCCAGATCCTCCTGGGCCAGGGTGCCAGGCTGCGCCTTCACAGACTaGCCGTCCAGCTCCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: YTGTGASVSRSSWARVPGCAFTD*PSSSRA Trigger: AGCCCTGGAGCTGGACGGGCAGTCTGTGAAGGCGCA...GCCTGGCACCCTGGCCCAGGAGGATCTGGAGACGGAAGCTCCAGTCCCTGTATA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR GCA 90 bp | GATGGGGGCAGGCCCAGGGACACAAACTATACAGGGACTGGAGCTTCCGTCTCCGCCTCAATGCAGGCCTaGTGGGCCCGGATGTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: DGGRPRDTNYTGTGASVSASMQA*WARMWP Trigger: TGGCCACATCCGGGCCCAGCAGGCCTGCATTGAGGC...GGAGACGGAAGCTCCAGTCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR GCA 90 bp | AGGGACTGGAGCTTCCGTCTCCAGATCCTCCTGGGCCAGGGTGCCAGGCAGGACAAGTGGCCCACACGCTaGAGGTGCTCCTCAATGTCC | + |
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Preference number: 4 (lower is better) Translates to: RDWSFRLQILLGQGARQDKWPTR*RCSSMS Trigger: GGACATTGAGGAGCACCTGCAGCGTGTGGGCCACTT...GTCCTGCCTGGCACCCTGGCCCAGGAGGATCTGGAGACGGAAGCTCCAGTCCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR CCA 90 bp | CAGCAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGACTGGAGCAGTGGGTTCCGAGTCTaGGGACCAAGACCAGGCGTC | + |
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Preference number: 4 (lower is better) Translates to: QQGRWGQAQGHKLYRDWSSGFRV*GPRPGV Trigger: GACGCCTGGTCTTGGTCCCCAGACTCGGAACCCACT...GCTCCAGTCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000236361.2 ENSMUST00000236515.2 |
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| CDS-3UTR GCA 90 bp | CAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGACTGGAGCTTCTGCCCCAGGAAGAAGTaGGCCTTCACAGACTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: QGRWGQAQGHKLYRDWSFCPRKK*AFTDCP Trigger: CGGGCAGTCTGTGAAGGCGCACTTCTTCCTGGGGCA...GAAGCTCCAGTCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR GCA 90 bp | GAACCCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGTGCCCCAGGAAGAAGTaGGCCTTCACAGACTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: EPISRADGGRPRDTNYTGCPRKK*AFTDCP Trigger: CGGGCAGTCTGTGAAGGCGCACTTCTTCCTGGGGCA...CCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGGGTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR GCA 90 bp | GCCGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGACTGGAGCTTCCGTCTGCCCCAGGAAGAAGTaGGCCTTCACAGACTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: ADGGRPRDTNYTGTGASVCPRKK*AFTDCP Trigger: CGGGCAGTCTGTGAAGGCGCACTTCTTCCTGGGGCA...GACGGAAGCTCCAGTCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR GCA 90 bp | AGTTCAGAACCCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATGCCTCAATGCAGGCCTaGTGGGCCCGGATGTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: SSEPISRADGGRPRDTNYASMQA*WARMWP Trigger: TGGCCACATCCGGGCCCAGCAGGCCTGCATTGAGGC...ATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGGGTTCTGAACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR CCA 90 bp | CAGCAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGACTGGAGCCTCTCCATCTCCAGCTaGCACTGCCCCAGGAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: QQGRWGQAQGHKLYRDWSLSISS*HCPRKK Trigger: CTTCTTCCTGGGGCAGTGCCAGCTGGAGATGGAGAG...GCTCCAGTCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR CCA 90 bp | AGAACCCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGGGATGAGCTGTTCCTaGGTCAGAGGGCTCCGGGTC | + |
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Preference number: 4 (lower is better) Translates to: RTHQQGRWGQAQGHKLYRGMSCS*VRGLRV Trigger: GACCCGGAGCCCTCTGACCCAGGAACAGCTCATCCC...CCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGGGTTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR CCA 90 bp | GATGGGGGCAGGCCCAGGGACACAAACTATACAGGGACTGGAGCTTCCGTCTCCGGGATGAGCTGTTCCTaGGTCAGAGGGCTCCGGGTC | + |
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Preference number: 4 (lower is better) Translates to: DGGRPRDTNYTGTGASVSGMSCS*VRGLRV Trigger: GACCCGGAGCCCTCTGACCCAGGAACAGCTCATCCC...GGAGACGGAAGCTCCAGTCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR CCA 90 bp | CGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGACTGGAGCTTCCGTCTCGGGATGAGCTGTTCCTaGGTCAGAGGGCTCCGGGTC | + |
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Preference number: 4 (lower is better) Translates to: RWGQAQGHKLYRDWSFRLGMSCS*VRGLRV Trigger: GACCCGGAGCCCTCTGACCCAGGAACAGCTCATCCC...GAGACGGAAGCTCCAGTCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR TCA 90 bp | GTTCAGAACCCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATACCCTCGTGGTTCCGCTaGCACTCCTCCAGTTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: VQNPSAGPMGAGPGTQTIPSWFR*HSSSSL Trigger: GAGGGAACTGGAGGAGTGTCAGCGGAACCACGAGGG...TATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGGGTTCTGAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR TCA 90 bp | AGTTCAGAACCCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATCCCTCGTGGTTCCGCTaGCACTCCTCCAGTTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: SSEPISRADGGRPRDTNYPSWFR*HSSSSL Trigger: GAGGGAACTGGAGGAGTGTCAGCGGAACCACGAGGG...ATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGGGTTCTGAACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR TCA 90 bp | GGAGGCTCATGGTCCAGCAAGGGGTATGCTGAGAAGGGGAGCAGTTCAGAACCCCCCTCGTGGTTCCGCTaGCACTCCTCCAGTTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: GGSWSSKGYAEKGSSSEPPSWFR*HSSSSL Trigger: GAGGGAACTGGAGGAGTGTCAGCGGAACCACGAGGG...GGGTTCTGAACTGCTCCCCTTCTCAGCATACCCCTTGCTGGACCATGAGCCTCC 61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR TCA 90 bp | GCCGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGACTGGAGCTTCCGTCTGGCCAAGTTGGGGATaGGCTGTTCCTGGGTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: ADGGRPRDTNYTGTGASVWPSWG*AVPGSE Trigger: CTCTGACCCAGGAACAGCTCATCCCCAACTTGGCCA...GACGGAAGCTCCAGTCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR GCA 90 bp | GTTCAGAACCCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATATGCGCCTTCACAGACTaGCCGTCCAGCTCCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: VQNPSAGPMGAGPGTQTICAFTD*PSSSRA Trigger: AGCCCTGGAGCTGGACGGGCAGTCTGTGAAGGCGCA...TATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGGGTTCTGAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR GCA 90 bp | CGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGACTGGAGCTTCCGTCTCATCTCCAGCTGGCACTaGCCCAGGAAGAAGTGCGCC | + |
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Preference number: 4 (lower is better) Translates to: RWGQAQGHKLYRDWSFRLISSWH*PRKKCA Trigger: GGCGCACTTCTTCCTGGGGCAGTGCCAGCTGGAGAT...GAGACGGAAGCTCCAGTCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR GCA 90 bp | GAACCCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGAAGTGGCCCACACGCTaGAGGTGCTCCTCAATGTCC | + |
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Preference number: 4 (lower is better) Translates to: EPISRADGGRPRDTNYTGKWPTR*RCSSMS Trigger: GGACATTGAGGAGCACCTGCAGCGTGTGGGCCACTT...CCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGGGTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR GCA 90 bp | CAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGACTGGAGCTTCAAGTGGCCCACACGCTaGAGGTGCTCCTCAATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QGRWGQAQGHKLYRDWSFKWPTR*RCSSMS Trigger: GGACATTGAGGAGCACCTGCAGCGTGTGGGCCACTT...GAAGCTCCAGTCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR CCA 90 bp | GCAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGACTGGAGCTTCTCTCCATCTCCAGCTaGCACTGCCCCAGGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AGPMGAGPGTQTIQGLELLSISS*HCPRKK Trigger: CTTCTTCCTGGGGCAGTGCCAGCTGGAGATGGAGAG...AAGCTCCAGTCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR CCA 90 bp | TATACAGGGACTGGAGCTTCCGTCTCCAGATCCTCCTGGGCCAGGGTGCCAGGCGTACACTGCCACAAGTaGGTTCCGAGTCTGGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: YTGTGASVSRSSWARVPGVHCHK*VPSLGT Trigger: GGTCCCCAGACTCGGAACCCACTTGTGGCAGTGTAC...GCCTGGCACCCTGGCCCAGGAGGATCTGGAGACGGAAGCTCCAGTCCCTGTATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236361.2 ENSMUST00000236515.2 |
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| CDS-3UTR TCA 90 bp | ATCAGCAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGACTGGATGGCCAAGTTGGGGATaGGCTGTTCCTGGGTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ISRADGGRPRDTNYTGTGWPSWG*AVPGSE Trigger: CTCTGACCCAGGAACAGCTCATCCCCAACTTGGCCA...TCCAGTCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTGCTGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR GCA 90 bp | AAACTATACAGGGACTGGAGCTTCCGTCTCCAGATCCTCCTGGGCCAGGGTGCCTGCCCCAGGAAGAAGTaGGCCTTCACAGACTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KLYRDWSFRLQILLGQGACPRKK*AFTDCP Trigger: CGGGCAGTCTGTGAAGGCGCACTTCTTCCTGGGGCA...GGCACCCTGGCCCAGGAGGATCTGGAGACGGAAGCTCCAGTCCCTGTATAGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR GCA 90 bp | TCAGAACCCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATACAATCTCCAGCTGGCACTaGCCCAGGAAGAAGTGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SEPISRADGGRPRDTNYTISSWH*PRKKCA Trigger: GGCGCACTTCTTCCTGGGGCAGTGCCAGCTGGAGAT...TGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGGGTTCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR GCA 90 bp | AACCCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGAAAGTGGCCCACACGCTaGAGGTGCTCCTCAATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NPSAGPMGAGPGTQTIQGKWPTR*RCSSMS Trigger: GGACATTGAGGAGCACCTGCAGCGTGTGGGCCACTT...TCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR CCA 90 bp | AACCCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGACTCTCCATCTCCAGCTaGCACTGCCCCAGGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NPSAGPMGAGPGTQTIQGLSISS*HCPRKK Trigger: CTTCTTCCTGGGGCAGTGCCAGCTGGAGATGGAGAG...TCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR CCA 90 bp | AGCAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGACTGGAGCTGTACACTGCCACAAGTaGGTTCCGAGTCCTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRADGGRPRDTNYTGTGAVHCHK*VPSPAQ Trigger: CTGAGCAGGACTCGGAACCCACTTGTGGCAGTGTAC...AGCTCCAGTCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237186.2 |
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| CDS-3UTR TCA 90 bp | CCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGACTGTATCATCCCCAAAGTTaGGTCGCTGCTCCTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSAGPMGAGPGTQTIQGLYHPQS*VAAPWP Trigger: TGGCCAAGGAGCAGCGACTCAACTTTGGGGATGATA...CAGTCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR TCA 90 bp | TATACAGGGACTGGAGCTTCCGTCTCCAGATCCTCCTGGGCCAGGGTGCCAGGCTATCATCCCCAAAGTTaGGTCGCTGCTCCTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YTGTGASVSRSSWARVPGYHPQS*VAAPWP Trigger: TGGCCAAGGAGCAGCGACTCAACTTTGGGGATGATA...GCCTGGCACCCTGGCCCAGGAGGATCTGGAGACGGAAGCTCCAGTCCCTGTATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR TCA 90 bp | GCAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGACTGGAGCTTTATCATCCCCAAAGTTaGGTCGCTGCTCCTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGPMGAGPGTQTIQGLELYHPQS*VAAPWP Trigger: TGGCCAAGGAGCAGCGACTCAACTTTGGGGATGATA...AAGCTCCAGTCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR CCA 90 bp | GGCTCATGGTCCAGCAAGGGGTATGCTGAGAAGGGGAGCAGTTCAGAACCCATCAGTGGGTTCCGAGTCTaGGGACCAAGACCAGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: GSWSSKGYAEKGSSSEPISGFRV*GPRPGV Trigger: GACGCCTGGTCTTGGTCCCCAGACTCGGAACCCACT...GATGGGTTCTGAACTGCTCCCCTTCTCAGCATACCCCTTGCTGGACCATGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236361.2 ENSMUST00000236515.2 |
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| CDS-3UTR GCA 90 bp | CGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGACTGGAGCTTCCGTCTCTGCTCCTTGAGCTCTTaGGCACTCGGGCTCTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: RWGQAQGHKLYRDWSFRLCSLSS*ALGLLS Trigger: TGATAAGAGCCCGAGTGCGCAAGAGCTCAAGGAGCA...GAGACGGAAGCTCCAGTCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044911.10 |
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| CDS-3UTR GCA 90 bp | GCTCATGGTCCAGCAAGGGGTATGCTGAGAAGGGGAGCAGTTCAGAACCCATCAATCTCCAGCTGGCACTaGCCCAGGAAGAAGTGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: AHGPARGMLRRGAVQNPSISSWH*PRKKCA Trigger: GGCGCACTTCTTCCTGGGGCAGTGCCAGCTGGAGAT...TGATGGGTTCTGAACTGCTCCCCTTCTCAGCATACCCCTTGCTGGACCATGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR GCA 90 bp | GCCGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGACTGGAGCTTCCGTCGCCATGTATTTATCGTaGTTGGCCTCAATGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ADGGRPRDTNYTGTGASVAMYLS*LASMQA Trigger: GGCCTGCATTGAGGCCAAGCACGATAAATACATGGC...GACGGAAGCTCCAGTCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR CCA 90 bp | CACAAACTATACAGGGACTGGAGCTTCCGTCTCCAGATCCTCCTGGGCCAGGGTGTACACTGCCACAAGTaGGTTCCGAGTGATGGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: HKLYRDWSFRLQILLGQGVHCHK*VPSDGA Trigger: CGCGCCATCACTCGGAACCCACTTGTGGCAGTGTAC...ACCCTGGCCCAGGAGGATCTGGAGACGGAAGCTCCAGTCCCTGTATAGTTTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044911.10 |
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| CDS-3UTR CCA 90 bp | ACACAAACTATACAGGGACTGGAGCTTCCGTCTCCAGATCCTCCTGGGCCAGGGCTCTCCATCTCCAGCTaGCACTGCCCCAGGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TQTIQGLELPSPDPPGPGLSISS*HCPRKK Trigger: CTTCTTCCTGGGGCAGTGCCAGCTGGAGATGGAGAG...CCCTGGCCCAGGAGGATCTGGAGACGGAAGCTCCAGTCCCTGTATAGTTTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
||
| CDS-3UTR CCA 90 bp | ACACAAACTATACAGGGACTGGAGCTTCCGTCTCCAGATCCTCCTGGGCCAGGGGTACACTGCCACAAGTaGGTTCCGAGTCTGGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: TQTIQGLELPSPDPPGPGVHCHK*VPSLGT Trigger: GGTCCCCAGACTCGGAACCCACTTGTGGCAGTGTAC...CCCTGGCCCAGGAGGATCTGGAGACGGAAGCTCCAGTCCCTGTATAGTTTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236361.2 ENSMUST00000236515.2 |
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| CDS-3UTR TCA 90 bp | AGTTCAGAACCCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATGAGCCTGGTGAGATATaGATGCAGCTCACTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSEPISRADGGRPRDTNYEPGEI*MQLTLL Trigger: CAGGAGAGTGAGCTGCATTCATATCTCACCAGGCTC...ATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGGGTTCTGAACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR TCA 90 bp | TCAGAACCCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATACAGAGCCTGGTGAGATATaGATGCAGCTCACTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SEPISRADGGRPRDTNYTEPGEI*MQLTLL Trigger: CAGGAGAGTGAGCTGCATTCATATCTCACCAGGCTC...TGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGGGTTCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR GCA 90 bp | CTGATCGGTGGTGGCATGCCACACTCAATCTGGACACCAGTGTCTTCATTTCTAGCCTCAATGCAGGCCTaGTGGGCCCGGATGTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LIGGGMPHSIWTPVSSFLASMQA*WARMWP Trigger: TGGCCACATCCGGGCCCAGCAGGCCTGCATTGAGGC...TAGAAATGAAGACACTGGTGTCCAGATTGAGTGTGGCATGCCACCACCGATCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044911.10 |
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| CDS-3UTR TCA 90 bp | TATTTTCCTGATCGGTGGTGGCATGCCACACTCAATCTGGACACCAGTGTCTTCGGTTTCCCTGCTCCTTaGGCTCTTGCGCACTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YFPDRWWHATLNLDTSVFGFPAP*ALAHSG Trigger: GCCCGAGTGCGCAAGAGCTCAAGGAGCAGGGAAACC...GAAGACACTGGTGTCCAGATTGAGTGTGGCATGCCACCACCGATCAGGAAAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044911.10 |
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| CDS-3UTR TCA 90 bp | GAGGCTCATGGTCCAGCAAGGGGTATGCTGAGAAGGGGAGCAGTTCAGAACCCATATCATCCCCAAAGTTaGGTCGCTGCTCCTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EAHGPARGMLRRGAVQNPYHPQS*VAAPWP Trigger: TGGCCAAGGAGCAGCGACTCAACTTTGGGGATGATA...TGGGTTCTGAACTGCTCCCCTTCTCAGCATACCCCTTGCTGGACCATGAGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR CCA 90 bp | AACCCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGAGCTGCAGATTGGCAATaGCCTCATCATAACTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NPSAGPMGAGPGTQTIQGAADWQ*PHHNSP Trigger: TGGAGAGTTATGATGAGGCCATTGCCAATCTGCAGC...TCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR TCA 90 bp | GCTCATGGTCCAGCAAGGGGTATGCTGAGAAGGGGAGCAGTTCAGAACCCATCAGAGCCTGGTGAGATATaGATGCAGCTCACTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AHGPARGMLRRGAVQNPSEPGEI*MQLTLL Trigger: CAGGAGAGTGAGCTGCATTCATATCTCACCAGGCTC...TGATGGGTTCTGAACTGCTCCCCTTCTCAGCATACCCCTTGCTGGACCATGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR GCA 90 bp | GGCTCATGGTCCAGCAAGGGGTATGCTGAGAAGGGGAGCAGTTCAGAACCCATCGCCATGTATTTATCGTaGTTGGCCTCAATGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GSWSSKGYAEKGSSSEPIAMYLS*LASMQA Trigger: GGCCTGCATTGAGGCCAAGCACGATAAATACATGGC...GATGGGTTCTGAACTGCTCCCCTTCTCAGCATACCCCTTGCTGGACCATGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR GCA 90 bp | ACACAAACTATACAGGGACTGGAGCTTCCGTCTCCAGATCCTCCTGGGCCAGGGGCCATGTATTTATCGTaGTTGGCCTCAATGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TQTIQGLELPSPDPPGPGAMYLS*LASMQA Trigger: GGCCTGCATTGAGGCCAAGCACGATAAATACATGGC...CCCTGGCCCAGGAGGATCTGGAGACGGAAGCTCCAGTCCCTGTATAGTTTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR CCA 90 bp | GGCTCATGGTCCAGCAAGGGGTATGCTGAGAAGGGGAGCAGTTCAGAACCCATCGCTGCAGATTGGCAATaGCCTCATCATAACTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSWSSKGYAEKGSSSEPIAADWQ*PHHNSP Trigger: TGGAGAGTTATGATGAGGCCATTGCCAATCTGCAGC...GATGGGTTCTGAACTGCTCCCCTTCTCAGCATACCCCTTGCTGGACCATGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR CCA 90 bp | ACACAAACTATACAGGGACTGGAGCTTCCGTCTCCAGATCCTCCTGGGCCAGGGGCTGCAGATTGGCAATaGCCTCATCATAACTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TQTIQGLELPSPDPPGPGAADWQ*PHHNSP Trigger: TGGAGAGTTATGATGAGGCCATTGCCAATCTGCAGC...CCCTGGCCCAGGAGGATCTGGAGACGGAAGCTCCAGTCCCTGTATAGTTTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| 3UTR CAA 72 bp | TCAATCTGGACACCAGTGTCTTCATTTCTACCTTCCTaGGCTAGCCAGACAGGCAACTGGCAAGCCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SIWTPVSSFLPS*ASQTGNWQAHC Trigger: GCAGTGGGCTTGCCAGTTGCCTGTCTGGCTAGCCAAGGAAGGTAGAAATGAAGACACTGGTGTCCAGATTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044911.10 |
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| CDS-3UTR GCA 90 bp | CAATGTAGTGCTCACAGACTTTATTACAGGACAGTGGCAGCAGCAGCAACCTCAGCCATGTATTTATCGTaGTTGGCCTCAATGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QCSAHRLYYRTVAAAATSAMYLS*LASMQA Trigger: GGCCTGCATTGAGGCCAAGCACGATAAATACATGGC...TGAGGTTGCTGCTGCTGCCACTGTCCTGTAATAAAGTCTGTGAGCACTACATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044911.10 ENSMUST00000237186.2 |
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| CDS-3UTR CCA 90 bp | TGGTGGCATGCCACACTCAATCTGGACACCAGTGTCTTCATTTCTACCTTCCTTGCTGCAGATTGGCAATaGCCTCATCATAACTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WWHATLNLDTSVFISTFLAADWQ*PHHNSP Trigger: TGGAGAGTTATGATGAGGCCATTGCCAATCTGCAGC...AAGGAAGGTAGAAATGAAGACACTGGTGTCCAGATTGAGTGTGGCATGCCACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044911.10 |
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| CDS GCA 90 bp | GCCGCCGCCTCCGGGTACTTGCGGCCCACGAAGAGCCGGTTTCCCTaGTCCTTGAGCTCTTGCGCACTCGGGCTCTTATCAGGGCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: AAASGYLRPTKSRFP*SLSSCALGLLSGLP Trigger: CGGCAGCCCTGATAAGAGCCCGAGTGCGCAAGAGCTCAAGGAGCAGGGAAACCGGCTCTTCGTGGGCCGCAAGTACCCGGAGGCGGCGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044911.10 |
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| CDS TCA 90 bp | CCTCCGGGTACTTGCGGCCCACGAAGAGCCGGTTTCCCTGCTCCTTaGGCTCTTGCGCACTCGGGCTCTTATCAGGGCTGCCGCCGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PPGTCGPRRAGFPAP*ALAHSGSYQGCRRH Trigger: GTGGCGGCGGCAGCCCTGATAAGAGCCCGAGTGCGCAAGAGCTCAAGGAGCAGGGAAACCGGCTCTTCGTGGGCCGCAAGTACCCGGAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044911.10 |
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| CDS GCA 90 bp | TACTTGCGGCCCACGAAGAGCCGGTTTCCCTGCTCCTTGAGCTCTTaGGCACTCGGGCTCTTATCAGGGCTGCCGCCGCCACCAGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: YLRPTKSRFPCSLSS*ALGLLSGLPPPPVP Trigger: GGGCACTGGTGGCGGCGGCAGCCCTGATAAGAGCCCGAGTGCGCAAGAGCTCAAGGAGCAGGGAAACCGGCTCTTCGTGGGCCGCAAGTA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044911.10 |
||
| CDS CCA 90 bp | CTTCAGATAGCACAGGGCCCGGTTAGTGTAGTACACTGCCACAAGTaGGTTCCGAGTGATGGCGCGGCCGTAGCAGGCCGCCGCCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LQIAQGPVSVVHCHK*VPSDGAAVAGRRLR Trigger: CCGGAGGCGGCGGCCTGCTACGGCCGCGCCATCACTCGGAACCCACTTGTGGCAGTGTACTACACTAACCGGGCCCTGTGCTATCTGAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044911.10 |
||
| CDS GCA 90 bp | CACAGACTGCCCGTCCAGCTCCAGGGCTCGCCGGCAGTCAGCAAGTaGCTGTTCAGGCTGCTGCATCTTCAGATAGCACAGGGCCCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: HRLPVQLQGSPAVSK*LFRLLHLQIAQGPV Trigger: AACCGGGCCCTGTGCTATCTGAAGATGCAGCAGCCTGAACAGGCACTTGCTGACTGCCGGCGAGCCCTGGAGCTGGACGGGCAGTCTGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
||
| CDS-3UTR CAA 90 bp | GGGGAGCAGTTCAGAACCCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGACACATATCATCCCCAAAGTaGAGTCGCTGCTCCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GEQFRTHQQGRWGQAQGHISSPK*SRCSLA Trigger: GGCCAAGGAGCAGCGACTCAACTTTGGGGATGATAT...GTGTCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGGGTTCTGAACTGCTCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS GCA 90 bp | CTGCTGCATCTTCAGATAGCACAGGGCCCGGTTAGTGTAGTACACTaGCACAAGTGGGTTCCGAGTGATGGCGCGGCCGTAGCAGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LLHLQIAQGPVSVVH*HKWVPSDGAAVAGR Trigger: GCGGCCTGCTACGGCCGCGCCATCACTCGGAACCCACTTGTGGCAGTGTACTACACTAACCGGGCCCTGTGCTATCTGAAGATGCAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044911.10 |
||
| CDS-3UTR CAA 90 bp | CCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGACTGCTGCTCCTTGAGCTCTaGCGCACTCGGGCTCTTATC | + |
|
Preference number: 5 (lower is better) Translates to: PSAGPMGAGPGTQTIQGLLLLEL*RTRALI Trigger: GATAAGAGCCCGAGTGCGCAAGAGCTCAAGGAGCAG...CAGTCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044911.10 |
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| CDS-3UTR CAA 90 bp | CGGTGGTGGCATGCCACACTCAATCTGGACACCAGTGTCTTCATTTCTACCTTCGCCGCCTCCGGGTACTaGCGGCCCACGAAGAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: RWWHATLNLDTSVFISTFAASGY*RPTKSR Trigger: CCGGCTCTTCGTGGGCCGCAAGTACCCGGAGGCGGC...GAAGGTAGAAATGAAGACACTGGTGTCCAGATTGAGTGTGGCATGCCACCACCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044911.10 |
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| CDS-3UTR CAA 90 bp | AGGGGAGCAGTTCAGAACCCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGACAATGTATTTATCGTGCTaGGCCTCAATGCAGGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: RGAVQNPSAGPMGAGPGTMYLSC*ASMQAC Trigger: GCAGGCCTGCATTGAGGCCAAGCACGATAAATACAT...TGTCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGGGTTCTGAACTGCTCCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS GCA 90 bp | CTGCTGCATCTTCAGATAGCACAGGGCCCGGTTAGTGTAGTACACTaGCACAAGTGGGTTCCGAGTCCTGCTCAGACCAAGGCTCCGCCC | + |
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Preference number: 5 (lower is better) Translates to: LLHLQIAQGPVSVVH*HKWVPSPAQTKAPP Trigger: GGGCGGAGCCTTGGTCTGAGCAGGACTCGGAACCCACTTGTGGCAGTGTACTACACTAACCGGGCCCTGTGCTATCTGAAGATGCAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237186.2 |
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| CDS-3UTR CAA 90 bp | CCATCAGCAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGACTGATATCATCCCCAAAGTaGAGTCGCTGCTCCTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: PSAGPMGAGPGTQTIQGLISSPK*SRCSLA Trigger: GGCCAAGGAGCAGCGACTCAACTTTGGGGATGATAT...CAGTCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTGCTGATGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR CAA 90 bp | CAGGGCCGATGGGGGCAGGCCCAGGGACACAAACTATACAGGGACTGGAGCTTCATGTATTTATCGTGCTaGGCCTCAATGCAGGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: QGRWGQAQGHKLYRDWSFMYLSC*ASMQAC Trigger: GCAGGCCTGCATTGAGGCCAAGCACGATAAATACAT...GAAGCTCCAGTCCCTGTATAGTTTGTGTCCCTGGGCCTGCCCCCATCGGCCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS GCA 90 bp | CTGCTGCATCTTCAGATAGCACAGGGCCCGGTTAGTGTAGTACACTaGCACAAGTGGGTTCCGAGTCTGGGGACCAAGACCAGGCGTCAA | + |
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Preference number: 5 (lower is better) Translates to: LLHLQIAQGPVSVVH*HKWVPSLGTKTRRQ Trigger: TTGACGCCTGGTCTTGGTCCCCAGACTCGGAACCCACTTGTGGCAGTGTACTACACTAACCGGGCCCTGTGCTATCTGAAGATGCAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236361.2 ENSMUST00000236515.2 |
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| CDS CCA 90 bp | GTCGCTGCTCCTTGGCCAAACTATAGGCTCGCTGCAGATTGGCAATaGCCTCATCATAACTCTCCATCTCCAGCTGGCACTGCCCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: VAAPWPNYRLAADWQ*PHHNSPSPAGTAPG Trigger: TCCTGGGGCAGTGCCAGCTGGAGATGGAGAGTTATGATGAGGCCATTGCCAATCTGCAGCGAGCCTATAGTTTGGCCAAGGAGCAGCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR CAA 90 bp | GAGGCTCATGGTCCAGCAAGGGGTATGCTGAGAAGGGGAGCAGTTCAGAACCCAATGTATTTATCGTGCTaGGCCTCAATGCAGGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: EAHGPARGMLRRGAVQNPMYLSC*ASMQAC Trigger: GCAGGCCTGCATTGAGGCCAAGCACGATAAATACAT...TGGGTTCTGAACTGCTCCCCTTCTCAGCATACCCCTTGCTGGACCATGAGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR CAA 90 bp | GGCTCATGGTCCAGCAAGGGGTATGCTGAGAAGGGGAGCAGTTCAGAACCCATCATGTATTTATCGTGCTaGGCCTCAATGCAGGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: GSWSSKGYAEKGSSSEPIMYLSC*ASMQAC Trigger: GCAGGCCTGCATTGAGGCCAAGCACGATAAATACAT...GATGGGTTCTGAACTGCTCCCCTTCTCAGCATACCCCTTGCTGGACCATGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS-3UTR CAA 90 bp | GCATGCCACACTCAATCTGGACACCAGTGTCTTCATTTCTACCTTCCTTGGCTAATATCATCCCCAAAGTaGAGTCGCTGCTCCTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: ACHTQSGHQCLHFYLPWLISSPK*SRCSLA Trigger: GGCCAAGGAGCAGCGACTCAACTTTGGGGATGATAT...TAGCCAAGGAAGGTAGAAATGAAGACACTGGTGTCCAGATTGAGTGTGGCATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044911.10 |
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| CDS CAA 90 bp | GCCTCCGGGTACTTGCGGCCCACGAAGAGCCGGTTTCCCTGCTCCTaGAGCTCTTGCGCACTCGGGCTCTTATCAGGGCTGCCGCCGCCA | + |
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Preference number: 6 (lower is better) Translates to: ASGYLRPTKSRFPCS*SSCALGLLSGLPPP Trigger: TGGCGGCGGCAGCCCTGATAAGAGCCCGAGTGCGCAAGAGCTCAAGGAGCAGGGAAACCGGCTCTTCGTGGGCCGCAAGTACCCGGAGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044911.10 |
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| CDS CAA 72 bp | GCCCACGAAGAGCCGGTTTCCCTGCTCCTTGAGCTCTaGCGCACTCGGGCTCTTATCAGGGCTGCCGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: AHEEPVSLLLEL*RTRALIRAAAA Trigger: GGCGGCGGCAGCCCTGATAAGAGCCCGAGTGCGCAAGAGCTCAAGGAGCAGGGAAACCGGCTCTTCGTGGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044911.10 |
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| CDS CAA 90 bp | GTACTTGCGGCCCACGAAGAGCCGGTTTCCCTGCTCCTTGAGCTCTaGCGCACTCGGGCTCTTATCAGGGCTGCCGCCGCCACCAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: VLAAHEEPVSLLLEL*RTRALIRAAAATSA Trigger: GGCACTGGTGGCGGCGGCAGCCCTGATAAGAGCCCGAGTGCGCAAGAGCTCAAGGAGCAGGGAAACCGGCTCTTCGTGGGCCGCAAGTAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044911.10 |
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| CDS GCA 72 bp | CCCACGAAGAGCCGGTTTCCCTGCTCCTTGAGCTCTTaGGCACTCGGGCTCTTATCAGGGCTGCCGCCGCCA | + |
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Preference number: 6 (lower is better) Translates to: PTKSRFPCSLSS*ALGLLSGLPPP Trigger: TGGCGGCGGCAGCCCTGATAAGAGCCCGAGTGCGCAAGAGCTCAAGGAGCAGGGAAACCGGCTCTTCGTGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044911.10 |
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| CDS CCA 72 bp | GCACAGGGCCCGGTTAGTGTAGTACACTGCCACAAGTaGGTTCCGAGTGATGGCGCGGCCGTAGCAGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: AQGPVSVVHCHK*VPSDGAAVAGR Trigger: GCGGCCTGCTACGGCCGCGCCATCACTCGGAACCCACTTGTGGCAGTGTACTACACTAACCGGGCCCTGTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044911.10 |
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| CDS GCA 72 bp | CTCTCCATCTCCAGCTGGCACTGCCCCAGGAAGAAGTaGGCCTTCACAGACTGCCCGTCCAGCTCCAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: LSISSWHCPRKK*AFTDCPSSSRA Trigger: AGCCCTGGAGCTGGACGGGCAGTCTGTGAAGGCGCACTTCTTCCTGGGGCAGTGCCAGCTGGAGATGGAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS TCA 72 bp | ACTTGCGGCCCACGAAGAGCCGGTTTCCCTGCTCCTTaGGCTCTTGCGCACTCGGGCTCTTATCAGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: TCGPRRAGFPAP*ALAHSGSYQGC Trigger: GCAGCCCTGATAAGAGCCCGAGTGCGCAAGAGCTCAAGGAGCAGGGAAACCGGCTCTTCGTGGGCCGCAAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044911.10 |
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| CDS CAA 72 bp | TACTTGCGGCCCACGAAGAGCCGGTTTCCCTGCTCCTaGAGCTCTTGCGCACTCGGGCTCTTATCAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: YLRPTKSRFPCS*SSCALGLLSGL Trigger: CAGCCCTGATAAGAGCCCGAGTGCGCAAGAGCTCAAGGAGCAGGGAAACCGGCTCTTCGTGGGCCGCAAGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044911.10 |
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| CDS GCA 72 bp | CTTCAGATAGCACAGGGCCCGGTTAGTGTAGTACACTaGCACAAGTGGGTTCCGAGTCTGGGGACCAAGACC | + |
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Preference number: 6 (lower is better) Translates to: LQIAQGPVSVVH*HKWVPSLGTKT Trigger: GGTCTTGGTCCCCAGACTCGGAACCCACTTGTGGCAGTGTACTACACTAACCGGGCCCTGTGCTATCTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236361.2 ENSMUST00000236515.2 |
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| CDS CCA 72 bp | AGCCTGGTGAGATATGAATGCAGCTCACTCTCCTGGTaGATGCGCCGTTCCTCGATACTGTTCCAGCGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SLVRYECSSLSW*MRRSSILFQRF Trigger: GAAGCGCTGGAACAGTATCGAGGAACGGCGCATCCACCAGGAGAGTGAGCTGCATTCATATCTCACCAGGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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| CDS TCA 72 bp | TCAGGGATATCTCGCTTCTTTCTTTTCTCGTCCACCTaGGAGAAGAGCTCATCCATATCTGCCATGTATTTA | + |
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Preference number: 6 (lower is better) Translates to: SGISRFFLFSST*EKSSSISAMYL Trigger: TAAATACATGGCAGATATGGATGAGCTCTTCTCTCAGGTGGACGAGAAAAGAAAGAAGCGAGATATCCCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044911.10 ENSMUST00000236361.2 ENSMUST00000236515.2 ENSMUST00000237186.2 |
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