Pregenerated sensors for STT3B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032437Ensembl transcript IDs: ENSMUST00000035010.10
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGCGGAGGGAGGCCCACCGTCAGCAGCGGCTGCTTACAGCGGCAGTaGGCGACAAAGTGGACATTTGATGAAACATTCTTCACACCGGAG | + |
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Preference number: 1 (lower is better) Translates to: RGGRPTVSSGCLQRQ*ATKWTFDETFFTPE Trigger: CTCCGGTGTGAAGAATGTTTCATCAAATGTCCACTTTGTCGCTCACTGCCGCTGTAAGCAGCCGCTGCTGACGGTGGGCCTCCCTCCGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| 3UTR CCA 90 bp | AGAACATTTTGTACATTGACTTGGCCCAGCGATGTTCTGTACCCTTaGTGCTGTGAAACAGGACATGAGCAGAAGGCAAAGACCGGTTCT | + |
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Preference number: 1 (lower is better) Translates to: RTFCTLTWPSDVLYP*CCETGHEQKAKTGS Trigger: AGAACCGGTCTTTGCCTTCTGCTCATGTCCTGTTTCACAGCACCAAGGGTACAGAACATCGCTGGGCCAAGTCAATGTACAAAATGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| 3UTR-3UTR CCA 90 bp | ATGAAGAATGCATGGAATCTGCTCTGTGAGTACCTGGTGAGGATGCCCGCTAACGATGTTCTGTACCCTTaGTGCTGTGAAACAGGACAT | + |
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Preference number: 2 (lower is better) Translates to: MKNAWNLLCEYLVRMPANDVLYP*CCETGH Trigger: ATGTCCTGTTTCACAGCACCAAGGGTACAGAACATC...GTTAGCGGGCATCCTCACCAGGTACTCACAGAGCAGATTCCATGCATTCTTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| 3UTR-3UTR TCA 90 bp | TTCTATAAATCAGAGTATCTACACCGTGGAAAAGGGATCTGCAGTAACATTCTCTCTGTGAGTACCTGGTaGGGATGCCCGCTAACCGCA | + |
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Preference number: 2 (lower is better) Translates to: FYKSEYLHRGKGICSNILSVSTW*GCPLTA Trigger: TGCGGTTAGCGGGCATCCTCACCAGGTACTCACAGA...GAGAATGTTACTGCAGATCCCTTTTCCACGGTGTAGATACTCTGATTTATAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| 3UTR-3UTR GCA 90 bp | ACAGCCATCCTGGCCAGCAACGTTCTGTGTGCGCTTGCCATGATTCCCAAAGGAAGCTCTCATCACATCTaGATTTCTGTCTTACATATT | + |
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Preference number: 2 (lower is better) Translates to: TAILASNVLCALAMIPKGSSHHI*ISVLHI Trigger: AATATGTAAGACAGAAATGCAGATGTGATGAGAGCT...TCCTTTGGGAATCATGGCAAGCGCACACAGAACGTTGCTGGCCAGGATGGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| 3UTR-3UTR GCA 90 bp | TGTGCCAGGGACCAAATTAGAGGGTTCTTTGGTGCAATTAGTCCAAATTCTCAGGTTCTGTACCCTTGGTaGTGTGAAACAGGACATGAG | + |
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Preference number: 2 (lower is better) Translates to: CARDQIRGFFGAISPNSQVLYPW*CETGHE Trigger: CTCATGTCCTGTTTCACAGCACCAAGGGTACAGAAC...CTGAGAATTTGGACTAATTGCACCAAAGAACCCTCTAATTTGGTCCCTGGCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| 3UTR-3UTR TCA 90 bp | TTCTATAAATCAGAGTATCTACACCGTGGAAAAGGGATCTGCAGTAACATTCTCGTAGAGTCACAGAAATaGACTCTGCATGCCTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: FYKSEYLHRGKGICSNILVESQK*TLHACP Trigger: TGGACAGGCATGCAGAGTTCATTTCTGTGACTCTAC...GAGAATGTTACTGCAGATCCCTTTTCCACGGTGTAGATACTCTGATTTATAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| 3UTR-3UTR TCA 90 bp | TTCTATAAATCAGAGTATCTACACCGTGGAAAAGGGATCTGCAGTAACATTCTCGAACATTTTGTACATTaGCTTGGCCCAGCGATGTTC | + |
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Preference number: 2 (lower is better) Translates to: FYKSEYLHRGKGICSNILEHFVH*LGPAMF Trigger: GAACATCGCTGGGCCAAGTCAATGTACAAAATGTTC...GAGAATGTTACTGCAGATCCCTTTTCCACGGTGTAGATACTCTGATTTATAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| 3UTR-3UTR GCA 90 bp | AGAATGAATTCTATAAATCAGAGTATCTACACCGTGGAAAAGGGATCTGCAGTAAGCAGGGCTCTGTCTTaGTTCACGTTACACATCAGA | + |
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Preference number: 2 (lower is better) Translates to: RMNSINQSIYTVEKGSAVSRALS*FTLHIR Trigger: TCTGATGTGTAACGTGAAGCAAGACAGAGCCCTGCT...TACTGCAGATCCCTTTTCCACGGTGTAGATACTCTGATTTATAGAATTCATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| 3UTR-3UTR CCA 90 bp | AGAATGAATTCTATAAATCAGAGTATCTACACCGTGGAAAAGGGATCTGCAGTATTTTGTACATTGACTTaGCCCAGCGATGTTCTGTAC | + |
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Preference number: 2 (lower is better) Translates to: RMNSINQSIYTVEKGSAVFCTLT*PSDVLY Trigger: GTACAGAACATCGCTGGGCCAAGTCAATGTACAAAA...TACTGCAGATCCCTTTTCCACGGTGTAGATACTCTGATTTATAGAATTCATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| 3UTR-3UTR CAA 90 bp | ACAGCCATCCTGGCCAGCAACGTTCTGTGTGCGCTTGCCATGATTCCCAAAGGACAGCAGGGCTCTGTCTaGCTTCACGTTACACATCAG | + |
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Preference number: 3 (lower is better) Translates to: TAILASNVLCALAMIPKGQQGSV*LHVTHQ Trigger: CTGATGTGTAACGTGAAGCAAGACAGAGCCCTGCTG...TCCTTTGGGAATCATGGCAAGCGCACACAGAACGTTGCTGGCCAGGATGGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| 3UTR TCA 72 bp | AGGCCCACCGTCAGCAGCGGCTGCTTACAGCGGCAGTaGGCGACAAAGTGGACATTTGATGAAACATTCTTC | + |
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Preference number: 3 (lower is better) Translates to: RPTVSSGCLQRQ*ATKWTFDETFF Trigger: GAAGAATGTTTCATCAAATGTCCACTTTGTCGCTCACTGCCGCTGTAAGCAGCCGCTGCTGACGGTGGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| 3UTR-3UTR CAA 90 bp | ACAGCCATCCTGGCCAGCAACGTTCTGTGTGCGCTTGCCATGATTCCCAAAGGAATTTTGTACATTGACTaGGCCCAGCGATGTTCTGTA | + |
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Preference number: 3 (lower is better) Translates to: TAILASNVLCALAMIPKGILYID*AQRCSV Trigger: TACAGAACATCGCTGGGCCAAGTCAATGTACAAAAT...TCCTTTGGGAATCATGGCAAGCGCACACAGAACGTTGCTGGCCAGGATGGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| 3UTR CCA 72 bp | GACGTAGACTCTCCTTTAGCACGTCTCTCTCAGACCTaGGCTAGTTTGTTTACTGGTCAAGAAGCTCTCATC | + |
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Preference number: 3 (lower is better) Translates to: DVDSPLARLSQT*ASLFTGQEALI Trigger: GATGAGAGCTTCTTGACCAGTAAACAAACTAGCCCAGGTCTGAGAGAGACGTGCTAAAGGAGAGTCTACGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| 3UTR-3UTR CAA 90 bp | CTCACAGCAGGGCTCTGTCTTGCTTCACGTTACACATCAGAAACAGCTGTTCTCCATTGCCAGAACATTTaGTACATTGACTTGGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: LTAGLCLASRYTSETAVLHCQNI*YIDLAQ Trigger: CTGGGCCAAGTCAATGTACAAAATGTTCTGGCAATG...GAGAACAGCTGTTTCTGATGTGTAACGTGAAGCAAGACAGAGCCCTGCTGTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| 3UTR-3UTR CAA 90 bp | CTCACAGCAGGGCTCTGTCTTGCTTCACGTTACACATCAGAAACAGCTGTTCTCAGAACATTTTGTACATaGACTTGGCCCAGCGATGTT | + |
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Preference number: 3 (lower is better) Translates to: LTAGLCLASRYTSETAVLRTFCT*TWPSDV Trigger: AACATCGCTGGGCCAAGTCAATGTACAAAATGTTCT...GAGAACAGCTGTTTCTGATGTGTAACGTGAAGCAAGACAGAGCCCTGCTGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| 3UTR GCA 72 bp | AAACGCCTAGAGAGCACTAGAGAGTGTTTCATCAAATaGTTAAGGTATAAAAACATGAAGCGGTCAACAGAA | + |
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Preference number: 3 (lower is better) Translates to: KRLESTRECFIK*LRYKNMKRSTE Trigger: TTCTGTTGACCGCTTCATGTTTTTATACCTTAAGCATTTGATGAAACACTCTCTAGTGCTCTCTAGGCGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| 3UTR CCA 72 bp | GTGGCAGGAAACCTCTCTCTCACTTTACTAAACAACTaGATAAAGATTTCAAGTCTGTATAAAGTTGCCTAT | + |
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Preference number: 3 (lower is better) Translates to: VAGNLSLTLLNN*IKISSLYKVAY Trigger: ATAGGCAACTTTATACAGACTTGAAATCTTTATCCAGTTGTTTAGTAAAGTGAGAGAGAGGTTTCCTGCCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS-3UTR GCA 90 bp | ACAGCCATCCTGGCCAGCAACGTTCTGTGTGCGCTTGCCATGATTCCCAAAGGATGCCACCCGGCCGGCTaGGACAAGCCCCCGGACAGC | + |
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Preference number: 4 (lower is better) Translates to: TAILASNVLCALAMIPKGCHPAG*DKPPDS Trigger: GCTGTCCGGGGGCTTGTCGCAGCCGGCCGGGTGGCA...TCCTTTGGGAATCATGGCAAGCGCACACAGAACGTTGCTGGCCAGGATGGCTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS-3UTR TCA 90 bp | ACAGCCATCCTGGCCAGCAACGTTCTGTGTGCGCTTGCCATGATTCCCAAAGGACGAAGAGGCGCGAGCTaGAGCCGGCCAGCCAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: TAILASNVLCALAMIPKGRRGAS*SRPARP Trigger: TGGCCTGGCTGGCCGGCTTCAGCTCGCGCCTCTTCG...TCCTTTGGGAATCATGGCAAGCGCACACAGAACGTTGCTGGCCAGGATGGCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS-3UTR GCA 90 bp | ACAGCCATCCTGGCCAGCAACGTTCTGTGTGCGCTTGCCATGATTCCCAAAGGATTGAGGGACGACTTGTaGTTGCTCTCCGGGGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: TAILASNVLCALAMIPKGLRDDL*LLSGAE Trigger: CTCGGCCCCGGAGAGCAAGCACAAGTCGTCCCTCAA...TCCTTTGGGAATCATGGCAAGCGCACACAGAACGTTGCTGGCCAGGATGGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS-3UTR CCA 90 bp | ACAGCCATCCTGGCCAGCAACGTTCTGTGTGCGCTTGCCATGATTCCCAAAGGACACGGGTCGAACTCGTaGATGATGCTCTCGAAGCGG | + |
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Preference number: 4 (lower is better) Translates to: TAILASNVLCALAMIPKGHGSNS*MMLSKR Trigger: CCGCTTCGAGAGCATCATCCACGAGTTCGACCCGTG...TCCTTTGGGAATCATGGCAAGCGCACACAGAACGTTGCTGGCCAGGATGGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS-3UTR TCA 90 bp | ATGAAGAATGCATGGAATCTGCTCTGTGAGTACCTGGTGAGGATGCCCGCTAACTCCACGGGGACGAGTTaGGGGACGACTTGTGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: MKNAWNLLCEYLVRMPANSTGTS*GTTCAC Trigger: GCAAGCACAAGTCGTCCCTCAACTCGTCCCCGTGGA...GTTAGCGGGCATCCTCACCAGGTACTCACAGAGCAGATTCCATGCATTCTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS-3UTR TCA 90 bp | ACAGCCATCCTGGCCAGCAACGTTCTGTGTGCGCTTGCCATGATTCCCAAAGGAGTGACTCGAGGTTTGTaGCCTAGTGTCTCCCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: TAILASNVLCALAMIPKGVTRGL*PSVSLL Trigger: CAACAGGGAGACACTAGGTCACAAACCTCGAGTCAC...TCCTTTGGGAATCATGGCAAGCGCACACAGAACGTTGCTGGCCAGGATGGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS-3UTR GCA 90 bp | ACAGCCATCCTGGCCAGCAACGTTCTGTGTGCGCTTGCCATGATTCCCAAAGGATGGTCCTGTTGGCCATaGCAGCAATCTGATAGCCGT | + |
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Preference number: 4 (lower is better) Translates to: TAILASNVLCALAMIPKGWSCWP*QQSDSR Trigger: ACGGCTATCAGATTGCTGGCATGGCCAACAGGACCA...TCCTTTGGGAATCATGGCAAGCGCACACAGAACGTTGCTGGCCAGGATGGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS-3UTR GCA 90 bp | TGTGCCAGGGACCAAATTAGAGGGTTCTTTGGTGCAATTAGTCCAAATTCTCAGGGGACGACTTGTGCTTaGTCTCCGGGGCCGAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: CARDQIRGFFGAISPNSQGTTCA*SPGPRA Trigger: AGCCCTCGGCCCCGGAGAGCAAGCACAAGTCGTCCC...CTGAGAATTTGGACTAATTGCACCAAAGAACCCTCTAATTTGGTCCCTGGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS-3UTR GCA 90 bp | ACAGCCATCCTGGCCAGCAACGTTCTGTGTGCGCTTGCCATGATTCCCAAAGGAGCCGCTAAAAGTTGGTaGAAGGAATACACACACATC | + |
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Preference number: 4 (lower is better) Translates to: TAILASNVLCALAMIPKGAAKSW*KEYTHI Trigger: GATGTGTGTGTATTCCTTGCACCAACTTTTAGCGGC...TCCTTTGGGAATCATGGCAAGCGCACACAGAACGTTGCTGGCCAGGATGGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS-3UTR TCA 90 bp | AGAATGAATTCTATAAATCAGAGTATCTACACCGTGGAAAAGGGATCTGCAGTATGTTCCCCAGAGCCATaGGGCCGCTCCACGGGGACG | + |
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Preference number: 4 (lower is better) Translates to: RMNSINQSIYTVEKGSAVCSPEP*GRSTGT Trigger: CGTCCCCGTGGAGCGGCCTCATGGCTCTGGGGAACA...TACTGCAGATCCCTTTTCCACGGTGTAGATACTCTGATTTATAGAATTCATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS-3UTR TCA 90 bp | ATGAAGAATGCATGGAATCTGCTCTGTGAGTACCTGGTGAGGATGCCCGCTAACACCCATGTCGTAGGCTaGTGTTCAGACACTGATGCA | + |
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Preference number: 4 (lower is better) Translates to: MKNAWNLLCEYLVRMPANTHVVG*CSDTDA Trigger: TGCATCAGTGTCTGAACATCAGCCTACGACATGGGT...GTTAGCGGGCATCCTCACCAGGTACTCACAGAGCAGATTCCATGCATTCTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS-3UTR CCA 90 bp | ATGAAGAATGCATGGAATCTGCTCTGTGAGTACCTGGTGAGGATGCCCGCTAACGCTGTCCTCCACAGGTaGGTTTTCCCTTTTCATGTC | + |
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Preference number: 4 (lower is better) Translates to: MKNAWNLLCEYLVRMPANAVLHR*VFPFHV Trigger: GACATGAAAAGGGAAAACCCACCTGTGGAGGACAGC...GTTAGCGGGCATCCTCACCAGGTACTCACAGAGCAGATTCCATGCATTCTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS-3UTR TCA 90 bp | AGTCTGTATAAAGTTGCCTATAAGCTGGAAAATGAACAGGCTCAATCTCCATTTTGCTCTCGAAGCGGATaGCGGCGAAGAGGCGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: SLYKVAYKLENEQAQSPFCSRSG*RRRGAS Trigger: GCTCGCGCCTCTTCGCCGTCATCCGCTTCGAGAGCA...AAATGGAGATTGAGCCTGTTCATTTTCCAGCTTATAGGCAACTTTATACAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS-3UTR TCA 90 bp | ACAGCCATCCTGGCCAGCAACGTTCTGTGTGCGCTTGCCATGATTCCCAAAGGATGCAAGATGATGTGTTaGTCTATAGTTAAACCACGG | + |
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Preference number: 4 (lower is better) Translates to: TAILASNVLCALAMIPKGCKMMC*SIVKPR Trigger: CCGTGGTTTAACTATAGATCAACACATCATCTTGCA...TCCTTTGGGAATCATGGCAAGCGCACACAGAACGTTGCTGGCCAGGATGGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS-3UTR TCA 90 bp | CTCACAGCAGGGCTCTGTCTTGCTTCACGTTACACATCAGAAACAGCTGTTCTCCAAAGTAGACAGCACTaGTCGCATACAGAGCGACAA | + |
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Preference number: 4 (lower is better) Translates to: LTAGLCLASRYTSETAVLQSRQH*SHTERQ Trigger: TTGTCGCTCTGTATGCGATCAGTGCTGTCTACTTTG...GAGAACAGCTGTTTCTGATGTGTAACGTGAAGCAAGACAGAGCCCTGCTGTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS-3UTR TCA 90 bp | ATGAAGAATGCATGGAATCTGCTCTGTGAGTACCTGGTGAGGATGCCCGCTAACGACAAGCCAGTGCTCTaGTGTAAAAGCTTCCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: MKNAWNLLCEYLVRMPANDKPVL*CKSFLQ Trigger: TTGGAGGAAGCTTTTACATCAGAGCACTGGCTTGTC...GTTAGCGGGCATCCTCACCAGGTACTCACAGAGCAGATTCCATGCATTCTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS-3UTR GCA 90 bp | AGTCTGTATAAAGTTGCCTATAAGCTGGAAAATGAACAGGCTCAATCTCCATTTAAGGAGAGCAACGACTaGCACCCGGCCGGCTGCGAC | + |
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Preference number: 4 (lower is better) Translates to: SLYKVAYKLENEQAQSPFKESND*HPAGCD Trigger: GTCGCAGCCGGCCGGGTGGCAGTCGTTGCTCTCCTT...AAATGGAGATTGAGCCTGTTCATTTTCCAGCTTATAGGCAACTTTATACAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS-3UTR GCA 90 bp | ATGAAGAATGCATGGAATCTGCTCTGTGAGTACCTGGTGAGGATGCCCGCTAACCAAAGCCTGGGGGAGTaGGAAAATCTAGCTGCATTT | + |
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Preference number: 4 (lower is better) Translates to: MKNAWNLLCEYLVRMPANQSLGE*ENLAAF Trigger: AAATGCAGCTAGATTTTCGCACTCCCCCAGGCTTTG...GTTAGCGGGCATCCTCACCAGGTACTCACAGAGCAGATTCCATGCATTCTTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS-3UTR GCA 90 bp | ATGAAGAATGCATGGAATCTGCTCTGTGAGTACCTGGTGAGGATGCCCGCTAACCCTGCCACTCCATGGTaGAATATAACCTGTGTATGT | + |
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Preference number: 4 (lower is better) Translates to: MKNAWNLLCEYLVRMPANPATPW*NITCVC Trigger: ACATACACAGGTTATATTGCACCATGGAGTGGCAGG...GTTAGCGGGCATCCTCACCAGGTACTCACAGAGCAGATTCCATGCATTCTTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS-3UTR CCA 90 bp | CTCACAGCAGGGCTCTGTCTTGCTTCACGTTACACATCAGAAACAGCTGTTCTCCACTATTCTTCCCAGTaGGTACCATGCTCTTTCATC | + |
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Preference number: 4 (lower is better) Translates to: LTAGLCLASRYTSETAVLHYSSQ*VPCSFI Trigger: GATGAAAGAGCATGGTACCCACTGGGAAGAATAGTG...GAGAACAGCTGTTTCTGATGTGTAACGTGAAGCAAGACAGAGCCCTGCTGTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS-3UTR CCA 90 bp | CTCACAGCAGGGCTCTGTCTTGCTTCACGTTACACATCAGAAACAGCTGTTCTCAAGGCCGCTAAAAGTTaGTGCAAGGAATACACACAC | + |
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Preference number: 4 (lower is better) Translates to: LTAGLCLASRYTSETAVLKAAKS*CKEYTH Trigger: GTGTGTGTATTCCTTGCACCAACTTTTAGCGGCCTT...GAGAACAGCTGTTTCTGATGTGTAACGTGAAGCAAGACAGAGCCCTGCTGTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS-3UTR TCA 90 bp | ATGAAGAATGCATGGAATCTGCTCTGTGAGTACCTGGTGAGGATGCCCGCTAACGACCATGTAGAAATATaGCAAGCAGCAGCACATTGT | + |
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Preference number: 4 (lower is better) Translates to: MKNAWNLLCEYLVRMPANDHVEI*QAAAHC Trigger: ACAATGTGCTGCTGCTTGTCATATTTCTACATGGTC...GTTAGCGGGCATCCTCACCAGGTACTCACAGAGCAGATTCCATGCATTCTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS-3UTR TCA 90 bp | ATGAAGAATGCATGGAATCTGCTCTGTGAGTACCTGGTGAGGATGCCCGCTAACTCACTTTATATATCCTaGCAAGCCAGTGCTCTGATG | + |
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Preference number: 4 (lower is better) Translates to: MKNAWNLLCEYLVRMPANSLYIS*QASALM Trigger: CATCAGAGCACTGGCTTGTCAGGATATATAAAGTGA...GTTAGCGGGCATCCTCACCAGGTACTCACAGAGCAGATTCCATGCATTCTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS-3UTR CCA 90 bp | TGTGCCAGGGACCAAATTAGAGGGTTCTTTGGTGCAATTAGTCCAAATTCTCAGTGTTATCATCAACCCTaGGTAAACGGTGCCACCCAC | + |
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Preference number: 4 (lower is better) Translates to: CARDQIRGFFGAISPNSQCYHQP*VNGATH Trigger: GTGGGTGGCACCGTTTACCCAGGGTTGATGATAACA...CTGAGAATTTGGACTAATTGCACCAAAGAACCCTCTAATTTGGTCCCTGGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS-3UTR CCA 90 bp | CTCACAGCAGGGCTCTGTCTTGCTTCACGTTACACATCAGAAACAGCTGTTCTCAAACCTGCCACTCCATaGTGCAATATAACCTGTGTA | + |
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Preference number: 4 (lower is better) Translates to: LTAGLCLASRYTSETAVLKPATP*CNITCV Trigger: TACACAGGTTATATTGCACCATGGAGTGGCAGGTTT...GAGAACAGCTGTTTCTGATGTGTAACGTGAAGCAAGACAGAGCCCTGCTGTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| 3UTR CAA 72 bp | GCTGCTTACAGCGGCAGTGAGCGACAAAGTGGACATTaGATGAAACATTCTTCACACCGGAGAAACAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: AAYSGSERQSGH*MKHSSHRRNRK Trigger: TTTCCTGTTTCTCCGGTGTGAAGAATGTTTCATCAAATGTCCACTTTGTCGCTCACTGCCGCTGTAAGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS-3UTR TCA 90 bp | CTCACAGCAGGGCTCTGTCTTGCTTCACGTTACACATCAGAAACAGCTGTTCTCCTGATGTTCAGACACTaGTGCAATAATTGGAATGTG | + |
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Preference number: 4 (lower is better) Translates to: LTAGLCLASRYTSETAVLLMFRH*CNNWNV Trigger: CACATTCCAATTATTGCATCAGTGTCTGAACATCAG...GAGAACAGCTGTTTCTGATGTGTAACGTGAAGCAAGACAGAGCCCTGCTGTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS-3UTR GCA 90 bp | CTCACAGCAGGGCTCTGTCTTGCTTCACGTTACACATCAGAAACAGCTGTTCTCCTCCCTGTTGTCAGGTaGTTTCACTTTATATATCCT | + |
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Preference number: 4 (lower is better) Translates to: LTAGLCLASRYTSETAVLLPVVR*FHFIYP Trigger: AGGATATATAAAGTGAAAGCACCTGACAACAGGGAG...GAGAACAGCTGTTTCTGATGTGTAACGTGAAGCAAGACAGAGCCCTGCTGTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS-3UTR CCA 90 bp | TGTGCCAGGGACCAAATTAGAGGGTTCTTTGGTGCAATTAGTCCAAATTCTCAGAGTGCTCAAAAACATTaGAGAAGGCGATGGCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: CARDQIRGFFGAISPNSQSAQKH*RRRWPT Trigger: TGTCGGCCATCGCCTTCTCCAATGTTTTTGAGCACT...CTGAGAATTTGGACTAATTGCACCAAAGAACCCTCTAATTTGGTCCCTGGCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR TCA 90 bp | AGAATGAATTCTATAAATCAGAGTATCTACACCGTGGAAAAGGGATCTGCAGTAAAAGGATCCCGCCACTaGCCGAGATATGTACCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RMNSINQSIYTVEKGSAVKGSRH*PRYVPW Trigger: CCAGGGTACATATCTCGGTCAGTGGCGGGATCCTTT...TACTGCAGATCCCTTTTCCACGGTGTAGATACTCTGATTTATAGAATTCATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR TCA 90 bp | AGTCTGTATAAAGTTGCCTATAAGCTGGAAAATGAACAGGCTCAATCTCCATTTACTCTCCCTGCTGGGTaGAATAGTCACCTTCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLYKVAYKLENEQAQSPFTLPAG*NSHLPG Trigger: TCCGGGAAGGTGACTATTTCACCCAGCAGGGAGAGT...AAATGGAGATTGAGCCTGTTCATTTTCCAGCTTATAGGCAACTTTATACAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR GCA 90 bp | CTCACAGCAGGGCTCTGTCTTGCTTCACGTTACACATCAGAAACAGCTGTTCTCCCACAATGTAGAAAGTaGTATATGCTATGTAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: LTAGLCLASRYTSETAVLPQCRK*YMLCRL Trigger: GAGTCTACATAGCATATAGCACTTTCTACATTGTGG...GAGAACAGCTGTTTCTGATGTGTAACGTGAAGCAAGACAGAGCCCTGCTGTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR GCA 90 bp | CTCACAGCAGGGCTCTGTCTTGCTTCACGTTACACATCAGAAACAGCTGTTCTCCCCACAAAAGGTATCTaGATGGATAATATTAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: LTAGLCLASRYTSETAVLPTKGI*MDNIKP Trigger: GGGTTTAATATTATCCATGCAGATACCTTTTGTGGG...GAGAACAGCTGTTTCTGATGTGTAACGTGAAGCAAGACAGAGCCCTGCTGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR GCA 90 bp | TTCTATAAATCAGAGTATCTACACCGTGGAAAAGGGATCTGCAGTAACATTCTCCGGATGTCTTTGGGATaGTCCCCTTCAGCTATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FYKSEYLHRGKGICSNILRMSLG*SPSAIL Trigger: CAGGATAGCTGAAGGGGAGCATCCCAAAGACATCCG...GAGAATGTTACTGCAGATCCCTTTTCCACGGTGTAGATACTCTGATTTATAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR CCA 90 bp | TGTGCCAGGGACCAAATTAGAGGGTTCTTTGGTGCAATTAGTCCAAATTCTCAGCCGAGATATGTACCCTaGTACGATAGCAATGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CARDQIRGFFGAISPNSQPRYVP*YDSNEA Trigger: TGCTTCATTGCTATCGTACCAGGGTACATATCTCGG...CTGAGAATTTGGACTAATTGCACCAAAGAACCCTCTAATTTGGTCCCTGGCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR CCA 90 bp | TGTGCCAGGGACCAAATTAGAGGGTTCTTTGGTGCAATTAGTCCAAATTCTCAGAGCAACACAAACACATaGAGAGGGATGAGGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: CARDQIRGFFGAISPNSQSNTNT*RGMRLM Trigger: CATCAACCTCATCCCTCTCCATGTGTTTGTGTTGCT...CTGAGAATTTGGACTAATTGCACCAAAGAACCCTCTAATTTGGTCCCTGGCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR CCA 90 bp | TGTGCCAGGGACCAAATTAGAGGGTTCTTTGGTGCAATTAGTCCAAATTCTCAGCTCGCTTGTTCTGATTaGCTGAAATCCCACAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CARDQIRGFFGAISPNSQLACSD*LKSHKR Trigger: CCTTTTGTGGGATTTCAGCCAATCAGAACAAGCGAG...CTGAGAATTTGGACTAATTGCACCAAAGAACCCTCTAATTTGGTCCCTGGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR CCA 90 bp | AGTCTGTATAAAGTTGCCTATAAGCTGGAAAATGAACAGGCTCAATCTCCATTTCCGACCAGTGCGATGTaGCTGTTGTTCCAGGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLYKVAYKLENEQAQSPFPTSAM*LLFQVL Trigger: CAACACCTGGAACAACAGCCACATCGCACTGGTCGG...AAATGGAGATTGAGCCTGTTCATTTTCCAGCTTATAGGCAACTTTATACAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR TCA 90 bp | TGTGCCAGGGACCAAATTAGAGGGTTCTTTGGTGCAATTAGTCCAAATTCTCAGCTTGTTCTGATTGGCTaGAATCCCACAAAAGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: CARDQIRGFFGAISPNSQLVLIG*NPTKGI Trigger: GATACCTTTTGTGGGATTTCAGCCAATCAGAACAAG...CTGAGAATTTGGACTAATTGCACCAAAGAACCCTCTAATTTGGTCCCTGGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR TCA 90 bp | AGAATGAATTCTATAAATCAGAGTATCTACACCGTGGAAAAGGGATCTGCAGTATGGGGACGATGTTGGTaGCTCGAGGTTTGTGACCTA | + |
|
Preference number: 4 (lower is better) Translates to: RMNSINQSIYTVEKGSAVWGRCW*LEVCDL Trigger: TAGGTCACAAACCTCGAGTCACCAACATCGTCCCCA...TACTGCAGATCCCTTTTCCACGGTGTAGATACTCTGATTTATAGAATTCATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR GCA 90 bp | TGTGCCAGGGACCAAATTAGAGGGTTCTTTGGTGCAATTAGTCCAAATTCTCAGTCCCAGTGGGTACCATaGTCTTTCATCAAACCAATT | + |
|
Preference number: 4 (lower is better) Translates to: CARDQIRGFFGAISPNSQSQWVP*SFIKPI Trigger: AATTGGTTTGATGAAAGAGCATGGTACCCACTGGGA...CTGAGAATTTGGACTAATTGCACCAAAGAACCCTCTAATTTGGTCCCTGGCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR GCA 90 bp | AGAATGAATTCTATAAATCAGAGTATCTACACCGTGGAAAAGGGATCTGCAGTATGTCATCCTCATCACTaGTGTCCTCCACAGGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RMNSINQSIYTVEKGSAVCHPHH*CPPQVG Trigger: ACCCACCTGTGGAGGACAGCAGTGATGAGGATGACA...TACTGCAGATCCCTTTTCCACGGTGTAGATACTCTGATTTATAGAATTCATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR CCA 90 bp | TGTGCCAGGGACCAAATTAGAGGGTTCTTTGGTGCAATTAGTCCAAATTCTCAGGTCATACAAGTTTCCTaGGTTTCTTTTGTCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CARDQIRGFFGAISPNSQVIQVS*VSFVIL Trigger: GAGGATGACAAAAGAAACCCAGGAAACTTGTATGAC...CTGAGAATTTGGACTAATTGCACCAAAGAACCCTCTAATTTGGTCCCTGGCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR GCA 90 bp | AGTCTGTATAAAGTTGCCTATAAGCTGGAAAATGAACAGGCTCAATCTCCATTTCTCTTGCTGTACCTCTaGATCAGCAGCAACACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SLYKVAYKLENEQAQSPFLLLYL*ISSNTN Trigger: GTTTGTGTTGCTGCTGATGCAGAGGTACAGCAAGAG...AAATGGAGATTGAGCCTGTTCATTTTCCAGCTTATAGGCAACTTTATACAGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR GCA 90 bp | TTCTATAAATCAGAGTATCTACACCGTGGAAAAGGGATCTGCAGTAACATTCTCCTTCCTCACTTTACCTaGCTTGTCATACAAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FYKSEYLHRGKGICSNILLPHFT*LVIQVS Trigger: GGAAACTTGTATGACAAGGCAGGTAAAGTGAGGAAG...GAGAATGTTACTGCAGATCCCTTTTCCACGGTGTAGATACTCTGATTTATAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR GCA 90 bp | AGAATGAATTCTATAAATCAGAGTATCTACACCGTGGAAAAGGGATCTGCAGTAATCCTGACAAGCCAGTaGTCTGATGTAAAAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RMNSINQSIYTVEKGSAVILTSQ*SDVKAS Trigger: GGAAGCTTTTACATCAGAGCACTGGCTTGTCAGGAT...TACTGCAGATCCCTTTTCCACGGTGTAGATACTCTGATTTATAGAATTCATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR TCA 90 bp | AGAATGAATTCTATAAATCAGAGTATCTACACCGTGGAAAAGGGATCTGCAGTACCCATAAGTAGTAAGTaGACTGAAGCGCAAAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: RMNSINQSIYTVEKGSAVPISSK*TEAQKW Trigger: CCATTTTTGCGCTTCAGTTCACTTACTACTTATGGG...TACTGCAGATCCCTTTTCCACGGTGTAGATACTCTGATTTATAGAATTCATTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR GCA 90 bp | TTCTATAAATCAGAGTATCTACACCGTGGAAAAGGGATCTGCAGTAACATTCTCGCGCAAAAATGGCAATaGCTTCATTATCAAAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: FYKSEYLHRGKGICSNILAQKWQ*LHYQRI Trigger: GATCCTTTGATAATGAAGGCATTGCCATTTTTGCGC...GAGAATGTTACTGCAGATCCCTTTTCCACGGTGTAGATACTCTGATTTATAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR GCA 90 bp | AGAATGAATTCTATAAATCAGAGTATCTACACCGTGGAAAAGGGATCTGCAGTAATAGTGAATAAAACCTaGCACTCCATGGTGCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: RMNSINQSIYTVEKGSAVIVNKT*HSMVQY Trigger: ATATTGCACCATGGAGTGGCAGGTTTTATTCACTAT...TACTGCAGATCCCTTTTCCACGGTGTAGATACTCTGATTTATAGAATTCATTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS GCA 90 bp | TTCGGCGCCGCCGCCCTGGACGCGCTCTGGGTTCCGGGCCCATGGTaGCCGTGGCGGCTGTTCCCCAGAGCCATGAGGCCGCTCCACGGG | + |
|
Preference number: 5 (lower is better) Translates to: FGAAALDALWVPGPW*PWRLFPRAMRPLHG Trigger: CCCGTGGAGCGGCCTCATGGCTCTGGGGAACAGCCGCCACGGGCACCATGGGCCCGGAACCCAGAGCGCGTCCAGGGCGGCGGCGCCGAA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS CCA 90 bp | GCCGCCGCCCTGGACGCGCTCTGGGTTCCGGGCCCATGGTGCCCGTaGCGGCTGTTCCCCAGAGCCATGAGGCCGCTCCACGGGGACGAG | + |
|
Preference number: 5 (lower is better) Translates to: AAALDALWVPGPWCP*RLFPRAMRPLHGDE Trigger: CTCGTCCCCGTGGAGCGGCCTCATGGCTCTGGGGAACAGCCGCCACGGGCACCATGGGCCCGGAACCCAGAGCGCGTCCAGGGCGGCGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS CCA 90 bp | GGCTTCGGCGCCGCCGCCCTGGACGCGCTCTGGGTTCCGGGCCCATaGTGCCCGTGGCGGCTGTTCCCCAGAGCCATGAGGCCGCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GFGAAALDALWVPGP*CPWRLFPRAMRPLH Trigger: GTGGAGCGGCCTCATGGCTCTGGGGAACAGCCGCCACGGGCACCATGGGCCCGGAACCCAGAGCGCGTCCAGGGCGGCGGCGCCGAAGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR CAA 90 bp | CTCACAGCAGGGCTCTGTCTTGCTTCACGTTACACATCAGAAACAGCTGTTCTCAGGGACGACTTGTGCTaGCTCTCCGGGGCCGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LTAGLCLASRYTSETAVLRDDLC*LSGAEG Trigger: GCCCTCGGCCCCGGAGAGCAAGCACAAGTCGTCCCT...GAGAACAGCTGTTTCTGATGTGTAACGTGAAGCAAGACAGAGCCCTGCTGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR CAA 90 bp | ACAGCCATCCTGGCCAGCAACGTTCTGTGTGCGCTTGCCATGATTCCCAAAGGAATGGTCACAATGCTTTaGATGTTGGGGCCCAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TAILASNVLCALAMIPKGMVTML*MLGPKP Trigger: GGGCTTGGGCCCCAACATCAAAAGCATTGTGACCAT...TCCTTTGGGAATCATGGCAAGCGCACACAGAACGTTGCTGGCCAGGATGGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS CCA 90 bp | TATATTCCTGGTACCATCATGATTGTAGGAGGCAAGGACCACACTTaGACTGGAGTAGGCGTTGCTTGTGACCCACGTGCAGTGGACCGC | + |
|
Preference number: 5 (lower is better) Translates to: YIPGTIMIVGGKDHT*TGVGVACDPRAVDR Trigger: GCGGTCCACTGCACGTGGGTCACAAGCAACGCCTACTCCAGTCCAAGTGTGGTCCTTGCCTCCTACAATCATGATGGTACCAGGAATATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR CAA 90 bp | ACAGCCATCCTGGCCAGCAACGTTCTGTGTGCGCTTGCCATGATTCCCAAAGGACCTAGTGTCTCCCTGTaGTCAGGTGCTTTCACTTTA | + |
|
Preference number: 5 (lower is better) Translates to: TAILASNVLCALAMIPKGPSVSL*SGAFTL Trigger: TAAAGTGAAAGCACCTGACAACAGGGAGACACTAGG...TCCTTTGGGAATCATGGCAAGCGCACACAGAACGTTGCTGGCCAGGATGGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR CAA 90 bp | ATGAAGAATGCATGGAATCTGCTCTGTGAGTACCTGGTGAGGATGCCCGCTAACACAATGCTTTTGATGTaGGGGCCCAAGCCCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: MKNAWNLLCEYLVRMPANTMLLM*GPKPSS Trigger: TGAAGAGGGCTTGGGCCCCAACATCAAAAGCATTGT...GTTAGCGGGCATCCTCACCAGGTACTCACAGAGCAGATTCCATGCATTCTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR CAA 90 bp | CTCACAGCAGGGCTCTGTCTTGCTTCACGTTACACATCAGAAACAGCTGTTCTCAGTGCGATGTGGCTGTaGTTCCAGGTGTTGTTATCC | + |
|
Preference number: 5 (lower is better) Translates to: LTAGLCLASRYTSETAVLSAMWL*FQVLLS Trigger: GGATAACAACACCTGGAACAACAGCCACATCGCACT...GAGAACAGCTGTTTCTGATGTGTAACGTGAAGCAAGACAGAGCCCTGCTGTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR CAA 90 bp | ATGAAGAATGCATGGAATCTGCTCTGTGAGTACCTGGTGAGGATGCCCGCTAACACCATCCAGAGGAACTaGTTGATATCGTCCCCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: MKNAWNLLCEYLVRMPANTIQRN*LISSPE Trigger: TTCCGGGGACGATATCAACAAGTTCCTCTGGATGGT...GTTAGCGGGCATCCTCACCAGGTACTCACAGAGCAGATTCCATGCATTCTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS GCA 90 bp | ATGTTGGGGCCCAAGCCCTCTTCAGGTTTCTCTTGCTCTGTCACATaGTTCCTCACTTTACCTGCCTTGTCATACAAGTTTCCTGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: MLGPKPSSGFSCSVT*FLTLPALSYKFPGF Trigger: AAACCCAGGAAACTTGTATGACAAGGCAGGTAAAGTGAGGAAGCATGTGACAGAGCAAGAGAAACCTGAAGAGGGCTTGGGCCCCAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR CAA 90 bp | TGTGCCAGGGACCAAATTAGAGGGTTCTTTGGTGCAATTAGTCCAAATTCTCAGACAAGCAGCAGCACATaGTCCAGAACACAGACCCGG | + |
|
Preference number: 5 (lower is better) Translates to: CARDQIRGFFGAISPNSQTSSST*SRTQTR Trigger: CCGGGTCTGTGTTCTGGACAATGTGCTGCTGCTTGT...CTGAGAATTTGGACTAATTGCACCAAAGAACCCTCTAATTTGGTCCCTGGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR CAA 90 bp | ATGAAGAATGCATGGAATCTGCTCTGTGAGTACCTGGTGAGGATGCCCGCTAACTCTGGAACTCCTGTTTaGTCAACCGGTCTCTCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: MKNAWNLLCEYLVRMPANSGTPV*STGLSD Trigger: ATCTGAGAGACCGGTTGACAAAACAGGAGTTCCAGA...GTTAGCGGGCATCCTCACCAGGTACTCACAGAGCAGATTCCATGCATTCTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR CAA 90 bp | ATGAAGAATGCATGGAATCTGCTCTGTGAGTACCTGGTGAGGATGCCCGCTAACCTCTTCAGGTTTCTCTaGCTCTGTCACATGCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: MKNAWNLLCEYLVRMPANLFRFL*LCHMLP Trigger: AGGAAGCATGTGACAGAGCAAGAGAAACCTGAAGAG...GTTAGCGGGCATCCTCACCAGGTACTCACAGAGCAGATTCCATGCATTCTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR CAA 90 bp | AGAATGAATTCTATAAATCAGAGTATCTACACCGTGGAAAAGGGATCTGCAGTAGAGTTGAGGGACGACTaGTGCTTGCTCTCCGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RMNSINQSIYTVEKGSAVELRDD*CLLSGA Trigger: GGCCCCGGAGAGCAAGCACAAGTCGTCCCTCAACTC...TACTGCAGATCCCTTTTCCACGGTGTAGATACTCTGATTTATAGAATTCATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR CAA 90 bp | TTCTATAAATCAGAGTATCTACACCGTGGAAAAGGGATCTGCAGTAACATTCTCCTCCACGGGGACGAGTaGAGGGACGACTTGTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FYKSEYLHRGKGICSNILLHGDE*RDDLCL Trigger: CAAGCACAAGTCGTCCCTCAACTCGTCCCCGTGGAG...GAGAATGTTACTGCAGATCCCTTTTCCACGGTGTAGATACTCTGATTTATAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS CCA 90 bp | CCTGGTACGATAGCAATGAAGCAAGCAGCTAGAAGTCCTGCTCCTTaGTTCCACAGTTCTCTAGTTAGCAGGAACGTAGATATGGATGTA | + |
|
Preference number: 5 (lower is better) Translates to: PGTIAMKQAARSPAP*FHSSLVSRNVDMDV Trigger: TACATCCATATCTACGTTCCTGCTAACTAGAGAACTGTGGAACCAAGGAGCAGGACTTCTAGCTGCTTGCTTCATTGCTATCGTACCAGG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS TCA 90 bp | GCAAAGACACCTGCAGCTGCCATGTGCTCGCTTGTTCTGATTGGCTaGAATCCCACAAAAGGTATCTGCATGGATAATATTAAACCCACA | + |
|
Preference number: 5 (lower is better) Translates to: AKTPAAAMCSLVLIG*NPTKGICMDNIKPT Trigger: TGTGGGTTTAATATTATCCATGCAGATACCTTTTGTGGGATTTCAGCCAATCAGAACAAGCGAGCACATGGCAGCTGCAGGTGTCTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR CAA 90 bp | TGTGCCAGGGACCAAATTAGAGGGTTCTTTGGTGCAATTAGTCCAAATTCTCAGGTGTTCATCCGTGTTTaGTCTCAGCCAAAAGTACGC | + |
|
Preference number: 5 (lower is better) Translates to: CARDQIRGFFGAISPNSQVFIRV*SQPKVR Trigger: GCGTACTTTTGGCTGAGACAAAACACGGATGAACAC...CTGAGAATTTGGACTAATTGCACCAAAGAACCCTCTAATTTGGTCCCTGGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS TCA 90 bp | GACAAATACTTCTGTTTGGGGACGATGTTGGTGACTCGAGGTTTGTaGCCTAGTGTCTCCCTGTTGTCAGGTGCTTTCACTTTATATATC | + |
|
Preference number: 5 (lower is better) Translates to: DKYFCLGTMLVTRGL*PSVSLLSGAFTLYI Trigger: GATATATAAAGTGAAAGCACCTGACAACAGGGAGACACTAGGTCACAAACCTCGAGTCACCAACATCGTCCCCAAACAGAAGTATTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR CAA 90 bp | TGTGCCAGGGACCAAATTAGAGGGTTCTTTGGTGCAATTAGTCCAAATTCTCAGTTTCCTGGGTTTCTTTaGTCATCCTCATCACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CARDQIRGFFGAISPNSQFPGFL*SSSSLL Trigger: CAGCAGTGATGAGGATGACAAAAGAAACCCAGGAAA...CTGAGAATTTGGACTAATTGCACCAAAGAACCCTCTAATTTGGTCCCTGGCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS TCA 90 bp | AGAACACAGACCCGGTCTTCACAGACTTTACCCATAAGTAGTAAGTaGACTGAAGCGCAAAAATGGCAATGCCTTCATTATCAAAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: RTQTRSSQTLPISSK*TEAQKWQCLHYQRI Trigger: GATCCTTTGATAATGAAGGCATTGCCATTTTTGCGCTTCAGTTCACTTACTACTTATGGGTAAAGTCTGTGAAGACCGGGTCTGTGTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR CAA 90 bp | TGTGCCAGGGACCAAATTAGAGGGTTCTTTGGTGCAATTAGTCCAAATTCTCAGTTCTTAGAGGTCTTCTaGCCTTTCTTAAACACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: CARDQIRGFFGAISPNSQFLEVF*PFLNTS Trigger: GCTAGTGTTTAAGAAAGGCAAGAAGACCTCTAAGAA...CTGAGAATTTGGACTAATTGCACCAAAGAACCCTCTAATTTGGTCCCTGGCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS-3UTR CAA 90 bp | TTCTATAAATCAGAGTATCTACACCGTGGAAAAGGGATCTGCAGTAACATTCTCGACAAATACTTCTGTTaGGGGACGATGTTGGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: FYKSEYLHRGKGICSNILDKYFC*GTMLVT Trigger: AGTCACCAACATCGTCCCCAAACAGAAGTATTTGTC...GAGAATGTTACTGCAGATCCCTTTTCCACGGTGTAGATACTCTGATTTATAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
||
| CDS TCA 90 bp | ATCAAAGAAGAAAGACACCCATGTCGTAGGCTGATGTTCAGACACTaGTGCAATAATTGGAATGTGTATTTTTGCATACCCAGTATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: IKEERHPCRRLMFRH*CNNWNVYFCIPSIP Trigger: TGGGATACTGGGTATGCAAAAATACACATTCCAATTATTGCATCAGTGTCTGAACATCAGCCTACGACATGGGTGTCTTTCTTCTTTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS-3UTR CAA 90 bp | AGTCTGTATAAAGTTGCCTATAAGCTGGAAAATGAACAGGCTCAATCTCCATTTTTGGAATGTGTATTTTaGCATACCCAGTATCCCATA | + |
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Preference number: 5 (lower is better) Translates to: SLYKVAYKLENEQAQSPFLECVF*HTQYPI Trigger: TATGGGATACTGGGTATGCAAAAATACACATTCCAA...AAATGGAGATTGAGCCTGTTCATTTTCCAGCTTATAGGCAACTTTATACAGACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS CCA 72 bp | GGCCCCGGCTTCGGCGCCGCCGCCCTGGACGCGCTCTaGGTTCCGGGCCCATGGTGCCCGTGGCGGCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: GPGFGAAALDAL*VPGPWCPWRLF Trigger: GAACAGCCGCCACGGGCACCATGGGCCCGGAACCCAGAGCGCGTCCAGGGCGGCGGCGCCGAAGCCGGGGCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS GCA 72 bp | GCCGCCCTGGACGCGCTCTGGGTTCCGGGCCCATGGTaGCCGTGGCGGCTGTTCCCCAGAGCCATGAGGCCG | + |
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Preference number: 6 (lower is better) Translates to: AALDALWVPGPW*PWRLFPRAMRP Trigger: CGGCCTCATGGCTCTGGGGAACAGCCGCCACGGGCACCATGGGCCCGGAACCCAGAGCGCGTCCAGGGCGGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS CCA 72 bp | CTGGACGCGCTCTGGGTTCCGGGCCCATGGTGCCCGTaGCGGCTGTTCCCCAGAGCCATGAGGCCGCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: LDALWVPGPWCP*RLFPRAMRPLH Trigger: GTGGAGCGGCCTCATGGCTCTGGGGAACAGCCGCCACGGGCACCATGGGCCCGGAACCCAGAGCGCGTCCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS GCA 72 bp | GCTCAAAAACATTGGAGAAGGCGATGGCCGACAGCATaGAGACGACCGGGGTCAGAGTCAGCATCAGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: AQKHWRRRWPTA*RRPGSESASAA Trigger: TGCGGCTGATGCTGACTCTGACCCCGGTCGTCTGCATGCTGTCGGCCATCGCCTTCTCCAATGTTTTTGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS TCA 72 bp | CAAGGACCACACTTGGACTGGAGTAGGCGTTGCTTGTaGCCCACGTGCAGTGGACCGCGAACATCATCAGGA | + |
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Preference number: 6 (lower is better) Translates to: QGPHLDWSRRCL*PTCSGPRTSSG Trigger: TCCTGATGATGTTCGCGGTCCACTGCACGTGGGTCACAAGCAACGCCTACTCCAGTCCAAGTGTGGTCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS CCA 72 bp | GGTACCATCATGATTGTAGGAGGCAAGGACCACACTTaGACTGGAGTAGGCGTTGCTTGTGACCCACGTGCA | + |
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Preference number: 6 (lower is better) Translates to: GTIMIVGGKDHT*TGVGVACDPRA Trigger: TGCACGTGGGTCACAAGCAACGCCTACTCCAGTCCAAGTGTGGTCCTTGCCTCCTACAATCATGATGGTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS GCA 72 bp | TTGATGTTGGGGCCCAAGCCCTCTTCAGGTTTCTCTTaGTCTGTCACATGCTTCCTCACTTTACCTGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LMLGPKPSSGFS*SVTCFLTLPAL Trigger: CAAGGCAGGTAAAGTGAGGAAGCATGTGACAGAGCAAGAGAAACCTGAAGAGGGCTTGGGCCCCAACATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS CAA 72 bp | GAAGACATAGCTTTTCCGACCAGTGCGATGTGGCTGTaGTTCCAGGTGTTGTTATCCACCAGAGTGGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: EDIAFPTSAMWL*FQVLLSTRVVL Trigger: CAGGACCACTCTGGTGGATAACAACACCTGGAACAACAGCCACATCGCACTGGTCGGAAAAGCTATGTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS CAA 90 bp | ATCATCAGGAGCATGAGCATCAGCATGGTCACAATGCTTTTGATGTaGGGGCCCAAGCCCTCTTCAGGTTTCTCTTGCTCTGTCACATGC | + |
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Preference number: 6 (lower is better) Translates to: IIRSMSISMVTMLLM*GPKPSSGFSCSVTC Trigger: GCATGTGACAGAGCAAGAGAAACCTGAAGAGGGCTTGGGCCCCAACATCAAAAGCATTGTGACCATGCTGATGCTCATGCTCCTGATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS TCA 72 bp | CACATAACCTCCCCACGCAGAGACCATGTAGAAATATaGCAAGCAGCAGCACATTGTCCAGAACACAGACCC | + |
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Preference number: 6 (lower is better) Translates to: HITSPRRDHVEI*QAAAHCPEHRP Trigger: GGGTCTGTGTTCTGGACAATGTGCTGCTGCTTGTCATATTTCTACATGGTCTCTGCGTGGGGAGGTTATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS TCA 72 bp | CAAAGACACCTGCAGCTGCCATGTGCTCGCTTGTTCTaGTTGGCTGAAATCCCACAAAAGGTATCTGCATGG | + |
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Preference number: 6 (lower is better) Translates to: QRHLQLPCARLF*LAEIPQKVSAW Trigger: CCATGCAGATACCTTTTGTGGGATTTCAGCCAATCAGAACAAGCGAGCACATGGCAGCTGCAGGTGTCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS TCA 72 bp | TCAGCCGCACCATCACTCCGGCAAAGTAGACAGCACTaGTCGCATACAGAGCGACAAATACTCTTTCATCGT | + |
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Preference number: 6 (lower is better) Translates to: SAAPSLRQSRQH*SHTERQILFHR Trigger: ACGATGAAAGAGTATTTGTCGCTCTGTATGCGATCAGTGCTGTCTACTTTGCCGGAGTGATGGTGCGGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS TCA 72 bp | TTCTGTTTGGGGACGATGTTGGTGACTCGAGGTTTGTaGCCTAGTGTCTCCCTGTTGTCAGGTGCTTTCACT | + |
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Preference number: 6 (lower is better) Translates to: FCLGTMLVTRGL*PSVSLLSGAFT Trigger: AGTGAAAGCACCTGACAACAGGGAGACACTAGGTCACAAACCTCGAGTCACCAACATCGTCCCCAAACAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS CAA 72 bp | AGCATGAGCATCAGCATGGTCACAATGCTTTTGATGTaGGGGCCCAAGCCCTCTTCAGGTTTCTCTTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: SMSISMVTMLLM*GPKPSSGFSCS Trigger: AGAGCAAGAGAAACCTGAAGAGGGCTTGGGCCCCAACATCAAAAGCATTGTGACCATGCTGATGCTCATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS CAA 72 bp | ATCAGGAGCATGAGCATCAGCATGGTCACAATGCTTTaGATGTTGGGGCCCAAGCCCTCTTCAGGTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: IRSMSISMVTML*MLGPKPSSGFS Trigger: AGAGAAACCTGAAGAGGGCTTGGGCCCCAACATCAAAAGCATTGTGACCATGCTGATGCTCATGCTCCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS CAA 72 bp | CCACCACGACATGACCCGGGCGTGTTCATCCGTGTTTaGTCTCAGCCAAAAGTACGCTTCTCTAAAATCATC | + |
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Preference number: 6 (lower is better) Translates to: PPRHDPGVFIRV*SQPKVRFSKII Trigger: GATGATTTTAGAGAAGCGTACTTTTGGCTGAGACAAAACACGGATGAACACGCCCGGGTCATGTCGTGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS CCA 72 bp | AATCCAATGAATAAGGCCAGCTGTTATCATCAACCCTaGGTAAACGGTGCCACCCACTATTCTTCCCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: NPMNKASCYHQP*VNGATHYSSQW Trigger: CCACTGGGAAGAATAGTGGGTGGCACCGTTTACCCAGGGTTGATGATAACAGCTGGCCTTATTCATTGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS CAA 72 bp | TTACCTGCCTTGTCATACAAGTTTCCTGGGTTTCTTTaGTCATCCTCATCACTGCTGTCCTCCACAGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: LPALSYKFPGFL*SSSSLLSSTGG Trigger: CCCACCTGTGGAGGACAGCAGTGATGAGGATGACAAAAGAAACCCAGGAAACTTGTATGACAAGGCAGGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS CAA 90 bp | TTCCTCACTTTACCTGCCTTGTCATACAAGTTTCCTGGGTTTCTTTaGTCATCCTCATCACTGCTGTCCTCCACAGGTGGGTTTTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: FLTLPALSYKFPGFL*SSSSLLSSTGGFSL Trigger: AAGGGAAAACCCACCTGTGGAGGACAGCAGTGATGAGGATGACAAAAGAAACCCAGGAAACTTGTATGACAAGGCAGGTAAAGTGAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS TCA 72 bp | CCTGCAGCTGCCATGTGCTCGCTTGTTCTGATTGGCTaGAATCCCACAAAAGGTATCTGCATGGATAATATT | + |
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Preference number: 6 (lower is better) Translates to: PAAAMCSLVLIG*NPTKGICMDNI Trigger: AATATTATCCATGCAGATACCTTTTGTGGGATTTCAGCCAATCAGAACAAGCGAGCACATGGCAGCTGCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS TCA 72 bp | TCTTTGACAAATACTTCTGTTTGGGGACGATGTTGGTaGCTCGAGGTTTGTGACCTAGTGTCTCCCTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: SLTNTSVWGRCW*LEVCDLVSPCC Trigger: ACAACAGGGAGACACTAGGTCACAAACCTCGAGTCACCAACATCGTCCCCAAACAGAAGTATTTGTCAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS CCA 72 bp | CTTCCTCACTTTACCTGCCTTGTCATACAAGTTTCCTaGGTTTCTTTTGTCATCCTCATCACTGCTGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: LPHFTCLVIQVS*VSFVILITAVL Trigger: GAGGACAGCAGTGATGAGGATGACAAAAGAAACCCAGGAAACTTGTATGACAAGGCAGGTAAAGTGAGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS CAA 72 bp | CTGATCGCATACAGAGCGACAAATACTCTTTCATCGTaGATATTTTTGATGCAGAACCATAGGCCTGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LIAYRATNTLSS*IFLMQNHRPAG Trigger: CCCAGCAGGCCTATGGTTCTGCATCAAAAATATCAACGATGAAAGAGTATTTGTCGCTCTGTATGCGATCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS TCA 72 bp | ACCCGGTCTTCACAGACTTTACCCATAAGTAGTAAGTaGACTGAAGCGCAAAAATGGCAATGCCTTCATTAT | + |
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Preference number: 6 (lower is better) Translates to: TRSSQTLPISSK*TEAQKWQCLHY Trigger: ATAATGAAGGCATTGCCATTTTTGCGCTTCAGTTCACTTACTACTTATGGGTAAAGTCTGTGAAGACCGGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS GCA 72 bp | GAACGTAGATATGGATGTAAGGCCGCTAAAAGTTGGTaGAAGGAATACACACACATCTCTTATGTGAACTGT | + |
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Preference number: 6 (lower is better) Translates to: ERRYGCKAAKSW*KEYTHISYVNC Trigger: ACAGTTCACATAAGAGATGTGTGTGTATTCCTTGCACCAACTTTTAGCGGCCTTACATCCATATCTACGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS CAA 72 bp | TACAGAGCGACAAATACTCTTTCATCGTTGATATTTTaGATGCAGAACCATAGGCCTGCTGGGAAGGTACAT | + |
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Preference number: 6 (lower is better) Translates to: YRATNTLSSLIF*MQNHRPAGKVH Trigger: ATGTACCTTCCCAGCAGGCCTATGGTTCTGCATCAAAAATATCAACGATGAAAGAGTATTTGTCGCTCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS CAA 90 bp | CTGATCGCATACAGAGCGACAAATACTCTTTCATCGTTGATATTTTaGATGCAGAACCATAGGCCTGCTGGGAAGGTACATACAAGAATA | + |
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Preference number: 6 (lower is better) Translates to: LIAYRATNTLSSLIF*MQNHRPAGKVHTRI Trigger: TATTCTTGTATGTACCTTCCCAGCAGGCCTATGGTTCTGCATCAAAAATATCAACGATGAAAGAGTATTTGTCGCTCTGTATGCGATCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS TCA 72 bp | AAACTCATAGAATCCATGAGATGCAAGATGATGTGTTaGTCTATAGTTAAACCACGGGTCGAACTCGTGGAT | + |
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Preference number: 6 (lower is better) Translates to: KLIESMRCKMMC*SIVKPRVELVD Trigger: ATCCACGAGTTCGACCCGTGGTTTAACTATAGATCAACACATCATCTTGCATCTCATGGATTCTATGAGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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| CDS GCA 72 bp | TTTTTGCATACCCAGTATCCCATAGTGAATAAAACCTaGCACTCCATGGTGCAATATAACCTGTGTATGTCA | + |
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Preference number: 6 (lower is better) Translates to: FLHTQYPIVNKT*HSMVQYNLCMS Trigger: TGACATACACAGGTTATATTGCACCATGGAGTGGCAGGTTTTATTCACTATGGGATACTGGGTATGCAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035010.10 |
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