Pregenerated sensors for STT3A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032116Ensembl transcript IDs: ENSMUST00000120381.9, ENSMUST00000128270.8, ENSMUST00000135934.2, ENSMUST00000217599.2
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGAGGCACAGTGCGAGGTTCACCAGACCTGGAAGCAAGAGTCTCTaGCGAGTGCTGGCTGGGTGTGTGGGTGGGCATGTGTGTGAAATT | + |
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Preference number: 1 (lower is better) Translates to: RRHSARFTRPGSKSL*RVLAGCVGGHVCEI Trigger: AATTTCACACACATGCCCACCCACACACCCAGCCAGCACTCGCCAGAGACTCTTGCTTCCAGGTCTGGTGAACCTCGCACTGTGCCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR CCA 90 bp | GTGCGAGGTTCACCAGACCTGGAAGCAAGAGTCTCTGGCGAGTGCTaGCTGGGTGTGTGGGTGGGCATGTGTGTGAAATTTTATTGTTGC | + |
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Preference number: 1 (lower is better) Translates to: VRGSPDLEARVSGEC*LGVWVGMCVKFYCC Trigger: GCAACAATAAAATTTCACACACATGCCCACCCACACACCCAGCCAGCACTCGCCAGAGACTCTTGCTTCCAGGTCTGGTGAACCTCGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR GCA 90 bp | AGCGAGGGCACACTTGGCAGCCCAATAGATGGAACCAGTCTTCACTaGCTTGATCCACATGTAGTAAGTAAGCAGCATGCAAAAGATAGC | + |
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Preference number: 1 (lower is better) Translates to: SEGTLGSPIDGTSLH*LDPHVVSKQHAKDS Trigger: GCTATCTTTTGCATGCTGCTTACTTACTACATGTGGATCAAGGCAGTGAAGACTGGTTCCATCTATTGGGCTGCCAAGTGTGCCCTCGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128270.8 |
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| 3UTR CCA 90 bp | AAACTGACTCAGAAAGCCCCACACTCAAATAACTTCATCATGGACTaGGGAGTTAATTCAACAGTTAAAACCAATGGCTGTTCTTACAAA | + |
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Preference number: 1 (lower is better) Translates to: KLTQKAPHSNNFIMD*GVNSTVKTNGCSYK Trigger: TTTGTAAGAACAGCCATTGGTTTTAACTGTTGAATTAACTCCCCAGTCCATGATGAAGTTATTTGAGTGTGGGGCTTTCTGAGTCAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR TCA 90 bp | CTACTTAGAAAAAGAATAACTGCCATTAGTTTGAAAGGATACTGGTaGGATCAGGAATACTCAGCAACTTTCTGTCCTTATAAAGCCAAA | + |
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Preference number: 1 (lower is better) Translates to: LLRKRITAISLKGYW*DQEYSATFCPYKAK Trigger: TTTGGCTTTATAAGGACAGAAAGTTGCTGAGTATTCCTGATCTCACCAGTATCCTTTCAAACTAATGGCAGTTATTCTTTTTCTAAGTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR-3UTR CCA 90 bp | CCAGACCTGGAAGCAAGAGTCTCTGGCGAGTGCTGGCTGGGTGTGTGGGTGGGCGAAACAGCACTCCTCTaGTCCCAGAAACATTTATTC | + |
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Preference number: 2 (lower is better) Translates to: PDLEARVSGECWLGVWVGETALL*SQKHLF Trigger: GAATAAATGTTTCTGGGACCAGAGGAGTGCTGTTTC...GCCCACCCACACACCCAGCCAGCACTCGCCAGAGACTCTTGCTTCCAGGTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR-3UTR CCA 90 bp | AGAACAGTAACAGATGATAGTAAAAATGGTGTCACAAAACATAGGGCAGTGGTTCTGGCGAGTGCTGGCTaGGTGTGTGGGTGGGCATGT | + |
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Preference number: 2 (lower is better) Translates to: RTVTDDSKNGVTKHRAVVLASAG*VCGWAC Trigger: ACATGCCCACCCACACACCCAGCCAGCACTCGCCAG...AACCACTGCCCTATGTTTTGTGACACCATTTTTACTATCATCTGTTACTGTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR CAA 90 bp | GTTAAAACCAATGGCTGTTCTTACAAAGGGTTCAATTCCGAGCACTaGCATGGCAACTCACAACTGTCGATAACTCCAGTGCCAGGAATC | + |
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Preference number: 2 (lower is better) Translates to: VKTNGCSYKGFNSEH*HGNSQLSITPVPGI Trigger: GATTCCTGGCACTGGAGTTATCGACAGTTGTGAGTTGCCATGCAAGTGCTCGGAATTGAACCCTTTGTAAGAACAGCCATTGGTTTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR-3UTR CCA 90 bp | AGAACAGTAACAGATGATAGTAAAAATGGTGTCACAAAACATAGGGCAGTGGTTTGCTGGCTGGGTGTGTaGGTGGGCATGTGTGTGAAA | + |
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Preference number: 2 (lower is better) Translates to: RTVTDDSKNGVTKHRAVVCWLGV*VGMCVK Trigger: TTTCACACACATGCCCACCCACACACCCAGCCAGCA...AACCACTGCCCTATGTTTTGTGACACCATTTTTACTATCATCTGTTACTGTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR-3UTR CCA 90 bp | AGAACAGTAACAGATGATAGTAAAAATGGTGTCACAAAACATAGGGCAGTGGTTGAGGTTCACCAGACCTaGAAGCAAGAGTCTCTGGCG | + |
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Preference number: 2 (lower is better) Translates to: RTVTDDSKNGVTKHRAVVEVHQT*KQESLA Trigger: CGCCAGAGACTCTTGCTTCCAGGTCTGGTGAACCTC...AACCACTGCCCTATGTTTTGTGACACCATTTTTACTATCATCTGTTACTGTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR-3UTR CCA 90 bp | TATTTAGCAAGGGATTCAAAACCAAGTAATCAAGCCTCAAAGTGGTATATGAACTGGGGACCTAGAGCATaGATATGGTCTTCCATCCGC | + |
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Preference number: 2 (lower is better) Translates to: YLARDSKPSNQASKWYMNWGPRA*IWSSIR Trigger: GCGGATGGAAGACCATATCCATGCTCTAGGTCCCCA...GTTCATATACCACTTTGAGGCTTGATTACTTGGTTTTGAATCCCTTGCTAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR CAA 90 bp | ATAGACATCGAGAACATAGACATAACAGCAAGAAAGCTGTCTTTCTaGCCCAGAAACAGCACTCCTCTGGTCCCAGAAACATTTATTCAT | + |
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Preference number: 2 (lower is better) Translates to: IDIENIDITARKLSF*PRNSTPLVPETFIH Trigger: ATGAATAAATGTTTCTGGGACCAGAGGAGTGCTGTTTCTGGGCAAGAAAGACAGCTTTCTTGCTGTTATGTCTATGTTCTCGATGTCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR-3UTR TCA 90 bp | ATTCTATGGGTACTAGGAATGCACATGATACACATATATGTGGTAAAACACCCAATCCGCTCACTTCTGTaGTCCTCGTATCAGCCAATT | + |
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Preference number: 2 (lower is better) Translates to: ILWVLGMHMIHIYVVKHPIRSLL*SSYQPI Trigger: AATTGGCTGATACGAGGATCACAGAAGTGAGCGGAT...TGGGTGTTTTACCACATATATGTGTATCATGTGCATTCCTAGTACCCATAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR-3UTR TCA 90 bp | ATTCTATGGGTACTAGGAATGCACATGATACACATATATGTGGTAAAACACCCAAGTTCAAAGCTGGCCTaGGCTACATGGAACAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: ILWVLGMHMIHIYVVKHPSSKLA*ATWNSL Trigger: AAGACTGTTCCATGTAGCTCAGGCCAGCTTTGAACT...TGGGTGTTTTACCACATATATGTGTATCATGTGCATTCCTAGTACCCATAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR-3UTR CCA 90 bp | TTAACGAATAGGTTTGATCACAGTATGAGAAAATGGGCACAAATGAGGGAGAACCCTATCTGGTTCATTTaGGGACCTAGAGCATGGATA | + |
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Preference number: 2 (lower is better) Translates to: LTNRFDHSMRKWAQMRENPIWFI*GPRAWI Trigger: TATCCATGCTCTAGGTCCCCAAATGAACCAGATAGG...GTTCTCCCTCATTTGTGCCCATTTTCTCATACTGTGATCAAACCTATTCGTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR-3UTR CCA 90 bp | GTGACAAAGTTGTTGTTTACATTTGTTGAACCAGAGCTAGTCCTTGAGATTGCTAAAAATCATTTCACTTaGCCCAGCCCATATTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: VTKLLFTFVEPELVLEIAKNHFT*PSPYCP Trigger: TGGACAATATGGGCTGGGCCAAGTGAAATGATTTTT...AGCAATCTCAAGGACTAGCTCTGGTTCAACAAATGTAAACAACAACTTTGTCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR-3UTR TCA 90 bp | AGGAGAATCAGGAATTCAAAGCCAGCCCTAGCTATAAAAGATACTGTCTCAAAAGTGCTTTGTAGTTTTTaGAGTCTCTTTTCTTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: RRIRNSKPALAIKDTVSKVLCSF*SLFSCS Trigger: ACTGCAAGAAAAGAGACTTCAAAAACTACAAAGCAC...TTTTGAGACAGTATCTTTTATAGCTAGGGCTGGCTTTGAATTCCTGATTCTCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGAAGAGCTCCAGAAATGTATTTCCCCTACATATAAGAAGATACTAAGACATTGGGAGATAATGGTTTaGCAAAGAGAACATGACGCA | + |
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Preference number: 2 (lower is better) Translates to: REELQKCISPTYKKILRHWEIMV*QREHDA Trigger: TGCGTCATGTTCTCTTTGGCAAACCATTATCTCCCA...ATGTCTTAGTATCTTCTTATATGTAGGGGAAATACATTTCTGGAGCTCTTCTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR-3UTR TCA 90 bp | AGAGAAGAGCTCCAGAAATGTATTTCCCCTACATATAAGAAGATACTAAGACATCCACATAATGACATCTaGTTCCAGAAACATCTACTG | + |
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Preference number: 2 (lower is better) Translates to: REELQKCISPTYKKILRHPHNDI*FQKHLL Trigger: CAGTAGATGTTTCTGGAATCAGATGTCATTATGTGG...ATGTCTTAGTATCTTCTTATATGTAGGGGAAATACATTTCTGGAGCTCTTCTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR-3UTR GCA 90 bp | ATTCTATGGGTACTAGGAATGCACATGATACACATATATGTGGTAAAACACCCATCTATGGGATCTCTGTaGTTTGTAGTTTTTGAAGTC | + |
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Preference number: 2 (lower is better) Translates to: ILWVLGMHMIHIYVVKHPSMGSL*FVVFEV Trigger: GACTTCAAAAACTACAAAGCACAGAGATCCCATAGA...TGGGTGTTTTACCACATATATGTGTATCATGTGCATTCCTAGTACCCATAGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR-3UTR CCA 90 bp | AGAACAGTAACAGATGATAGTAAAAATGGTGTCACAAAACATAGGGCAGTGGTTGATCTTAAGAACTACTaGATTAGTCACTTTTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: RTVTDDSKNGVTKHRAVVDLKNY*ISHFCF Trigger: GAAGCAAAAGTGACTAATCCAGTAGTTCTTAAGATC...AACCACTGCCCTATGTTTTGTGACACCATTTTTACTATCATCTGTTACTGTTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR CCA 72 bp | AGTGCGAGGTTCACCAGACCTGGAAGCAAGAGTCTCTaGCGAGTGCTGGCTGGGTGTGTGGGTGGGCATGTG | + |
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Preference number: 3 (lower is better) Translates to: SARFTRPGSKSL*RVLAGCVGGHV Trigger: CACATGCCCACCCACACACCCAGCCAGCACTCGCCAGAGACTCTTGCTTCCAGGTCTGGTGAACCTCGCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR CCA 72 bp | ATCAGGCAGGAGGCACAGTGCGAGGTTCACCAGACCTaGAAGCAAGAGTCTCTGGCGAGTGCTGGCTGGGTG | + |
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Preference number: 3 (lower is better) Translates to: IRQEAQCEVHQT*KQESLASAGWV Trigger: CACCCAGCCAGCACTCGCCAGAGACTCTTGCTTCCAGGTCTGGTGAACCTCGCACTGTGCCTCCTGCCTGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR-3UTR CAA 90 bp | CCAGACCTGGAAGCAAGAGTCTCTGGCGAGTGCTGGCTGGGTGTGTGGGTGGGCAGAAAGCTGTCTTTCTaGCCCAGAAACAGCACTCCT | + |
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Preference number: 3 (lower is better) Translates to: PDLEARVSGECWLGVWVGRKLSF*PRNSTP Trigger: AGGAGTGCTGTTTCTGGGCAAGAAAGACAGCTTTCT...GCCCACCCACACACCCAGCCAGCACTCGCCAGAGACTCTTGCTTCCAGGTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR CCA 72 bp | AGCCCAGCTCCTGCATCCTTGAGCTCTTTGGTAAGGTaGTACGTAACGATGGTGGTGAAAGAGGAGAAAAGC | + |
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Preference number: 3 (lower is better) Translates to: SPAPASLSSLVR*YVTMVVKEEKS Trigger: GCTTTTCTCCTCTTTCACCACCATCGTTACGTACCACCTTACCAAAGAGCTCAAGGATGCAGGAGCTGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128270.8 |
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| 3UTR-3UTR CAA 90 bp | TTCATTATCATAGGAGCCAGCTACAGATCGAGAAATATACCCAGGAACTACAGCCCAGCTCCTGCATCCTaGAGCTCTTTGGTAAGGTGG | + |
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Preference number: 3 (lower is better) Translates to: FIIIGASYRSRNIPRNYSPAPAS*SSLVRW Trigger: CCACCTTACCAAAGAGCTCAAGGATGCAGGAGCTGG...GCTGTAGTTCCTGGGTATATTTCTCGATCTGTAGCTGGCTCCTATGATAATGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128270.8 |
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| 3UTR-3UTR CAA 90 bp | GTGACAAAGTTGTTGTTTACATTTGTTGAACCAGAGCTAGTCCTTGAGATTGCTTTGGCCCAGCCCATATaGTCCAGGGCAAAACTTGCA | + |
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Preference number: 3 (lower is better) Translates to: VTKLLFTFVEPELVLEIALAQPI*SRAKLA Trigger: TGCAAGTTTTGCCCTGGACAATATGGGCTGGGCCAA...AGCAATCTCAAGGACTAGCTCTGGTTCAACAAATGTAAACAACAACTTTGTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR TCA 72 bp | GGCTGCTACTCTTTAATACAGCTCATCATCTTGTGGTaGCATCCCAGCCATAAAAGTATTTTCACTGTGACC | + |
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Preference number: 3 (lower is better) Translates to: GCYSLIQLIILW*HPSHKSIFTVT Trigger: GGTCACAGTGAAAATACTTTTATGGCTGGGATGTCACCACAAGATGATGAGCTGTATTAAAGAGTAGCAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR TCA 72 bp | AAGATCAAGAGTTCAAAGCTAGCATCATCTGTATCTTaGGTTCAAAGCTGGCCTGAGCTACATGGAACAGTC | + |
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Preference number: 3 (lower is better) Translates to: KIKSSKLASSVS*VQSWPELHGTV Trigger: GACTGTTCCATGTAGCTCAGGCCAGCTTTGAACTCAAGATACAGATGATGCTAGCTTTGAACTCTTGATCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR CCA 72 bp | CAGTGCCAGGAATCTGATGTCTTCCTCTGGATTCTATaGGTACTAGGAATGCACATGATACACATATATGTG | + |
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Preference number: 3 (lower is better) Translates to: QCQESDVFLWIL*VLGMHMIHIYV Trigger: CACATATATGTGTATCATGTGCATTCCTAGTACCCATAGAATCCAGAGGAAGACATCAGATTCCTGGCACTG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR CCA 72 bp | CAGCAGACTGACATTAAGAAAAACAGAAGCTCACGGTaGATAACCCTAAGAGATTTAGTGCAGTCTAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: QQTDIKKNRSSR*ITLRDLVQSRE Trigger: TTCTCTAGACTGCACTAAATCTCTTAGGGTTATCCACCGTGAGCTTCTGTTTTTCTTAATGTCAGTCTGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR CCA 72 bp | CAGAAAGCCCCACACTCAAATAACTTCATCATGGACTaGGGAGTTAATTCAACAGTTAAAACCAATGGCTGT | + |
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Preference number: 3 (lower is better) Translates to: QKAPHSNNFIMD*GVNSTVKTNGC Trigger: ACAGCCATTGGTTTTAACTGTTGAATTAACTCCCCAGTCCATGATGAAGTTATTTGAGTGTGGGGCTTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR CCA 72 bp | ATGATAGTAAAAATGGTGTCACAAAACATAGGGCAGTaGTTCTCAACCTTCCTAAGGCTGCTACTCTTTAAT | + |
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Preference number: 3 (lower is better) Translates to: MIVKMVSQNIGQ*FSTFLRLLLFN Trigger: ATTAAAGAGTAGCAGCCTTAGGAAGGTTGAGAACCACTGCCCTATGTTTTGTGACACCATTTTTACTATCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| 3UTR-3UTR CAA 90 bp | GTGACAAAGTTGTTGTTTACATTTGTTGAACCAGAGCTAGTCCTTGAGATTGCTGCCATAACATTTCATTaGGTAACCTGCTCAGAATTA | + |
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Preference number: 3 (lower is better) Translates to: VTKLLFTFVEPELVLEIAAITFH*VTCSEL Trigger: TAATTCTGAGCAGGTTACCAAATGAAATGTTATGGC...AGCAATCTCAAGGACTAGCTCTGGTTCAACAAATGTAAACAACAACTTTGTCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120381.9 ENSMUST00000135934.2 |
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| 3UTR TCA 72 bp | ATTCAAAACCAAGTAATCAAGCCTCAAAGTGGTATATaGACACAGCAGACTGACATTAAGAAAAACAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: IQNQVIKPQSGI*TQQTDIKKNRS Trigger: GCTTCTGTTTTTCTTAATGTCAGTCTGCTGTGTTCATATACCACTTTGAGGCTTGATTACTTGGTTTTGAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| CDS-3UTR CCA 90 bp | AGGAGAATCAGGAATTCAAAGCCAGCCCTAGCTATAAAAGATACTGTCTCAAAAAGCCTGGTGGACGCTTaGCTTCTGTGTAGACCTGCC | + |
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Preference number: 4 (lower is better) Translates to: RRIRNSKPALAIKDTVSKSLVDA*LLCRPA Trigger: GGCAGGTCTACACAGAAGCCAAGCGTCCACCAGGCT...TTTTGAGACAGTATCTTTTATAGCTAGGGCTGGCTTTGAATTCCTGATTCTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| CDS-3UTR TCA 90 bp | AGCTCCTGCATCCTTGAGCTCTTTGGTAAGGTGGTACGTAACGATGGTGGTGAAGATCAAACTCATGGATaGCACTTTCAAATCTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SSCILELFGKVVRNDGGEDQTHG*HFQISA Trigger: TGCTGAGATTTGAAAGTGTCATCCATGAGTTTGATC...TTCACCACCATCGTTACGTACCACCTTACCAAAGAGCTCAAGGATGCAGGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128270.8 |
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| CDS-3UTR TCA 90 bp | AGCTCCTGCATCCTTGAGCTCTTTGGTAAGGTGGTACGTAACGATGGTGGTGAAAGATTGCAGCAGAAGTaGTCATTAAACGGATCAAAC | + |
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Preference number: 4 (lower is better) Translates to: SSCILELFGKVVRNDGGERLQQK*SLNGSN Trigger: GTTTGATCCGTTTAATGATCACTTCTGCTGCAATCT...TTCACCACCATCGTTACGTACCACCTTACCAAAGAGCTCAAGGATGCAGGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128270.8 |
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| CDS-3UTR GCA 90 bp | AGGAGAATCAGGAATTCAAAGCCAGCCCTAGCTATAAAAGATACTGTCTCAAAAGTCTTCCTGTCTCTGTaGTTCCTCCAATCCGGACCA | + |
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Preference number: 4 (lower is better) Translates to: RRIRNSKPALAIKDTVSKVFLSL*FLQSGP Trigger: TGGTCCGGATTGGAGGAAGCACAGAGACAGGAAGAC...TTTTGAGACAGTATCTTTTATAGCTAGGGCTGGCTTTGAATTCCTGATTCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| CDS-3UTR CCA 90 bp | GTGACAAAGTTGTTGTTTACATTTGTTGAACCAGAGCTAGTCCTTGAGATTGCTTGGCAGCCCAATAGATaGAACCAGTCTTCACTGCCT | + |
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Preference number: 4 (lower is better) Translates to: VTKLLFTFVEPELVLEIAWQPNR*NQSSLP Trigger: AGGCAGTGAAGACTGGTTCCATCTATTGGGCTGCCA...AGCAATCTCAAGGACTAGCTCTGGTTCAACAAATGTAAACAACAACTTTGTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120381.9 ENSMUST00000135934.2 |
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| CDS-3UTR CCA 90 bp | CACTTCTGTGATCCTCGTATCAGCCAATTTAAGTCAAAACAAATAAGGCACATTAACACGGTCAAAGCCTaGTGGACGCTTGGCTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: HFCDPRISQFKSKQIRHINTVKA*WTLGFC Trigger: ACAGAAGCCAAGCGTCCACCAGGCTTTGACCGTGTT...AATGTGCCTTATTTGTTTTGACTTAAATTGGCTGATACGAGGATCACAGAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| CDS-3UTR CCA 90 bp | AGGAGAATCAGGAATTCAAAGCCAGCCCTAGCTATAAAAGATACTGTCTCAAAACTAGCCAGTGTTCTGTaGTATACGCTTCCTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: RRIRNSKPALAIKDTVSKLASVL*YTLPPG Trigger: TCCTGGAGGAAGCGTATACCACAGAACACTGGCTAG...TTTTGAGACAGTATCTTTTATAGCTAGGGCTGGCTTTGAATTCCTGATTCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| CDS-3UTR CCA 90 bp | CCAGCTACAGATCGAGAAATATACCCAGGAACTACAGCAATCATGGCAGCAGCAAACGGATCAAACTCATaGATGACACTTTCAAATCTC | + |
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Preference number: 4 (lower is better) Translates to: PATDREIYPGTTAIMAAANGSNS*MTLSNL Trigger: GAGATTTGAAAGTGTCATCCATGAGTTTGATCCGTT...TGCTGCTGCCATGATTGCTGTAGTTCCTGGGTATATTTCTCGATCTGTAGCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128270.8 |
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| 3UTR CAA 72 bp | AGAGCGCCAGTCTGGAATGCTATACCCAGCTATGCATaGAGTATGATAGAGAAGAGCTCCAGAAATGTATTT | + |
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Preference number: 4 (lower is better) Translates to: RAPVWNAIPSYA*SMIEKSSRNVF Trigger: AAATACATTTCTGGAGCTCTTCTCTATCATACTCAATGCATAGCTGGGTATAGCATTCCAGACTGGCGCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| CDS-3UTR TCA 90 bp | GTAACAGATGATAGTAAAAATGGTGTCACAAAACATAGGGCAGTGGTTCTCAACAATCCCACCATGACATaGCTTTTGCATCCTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: VTDDSKNGVTKHRAVVLNNPTMT*LLHPLE Trigger: CTCCAGAGGATGCAAAAGTCATGTCATGGTGGGATT...GTTGAGAACCACTGCCCTATGTTTTGTGACACCATTTTTACTATCATCTGTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| CDS-3UTR GCA 90 bp | TTAACGAATAGGTTTGATCACAGTATGAGAAAATGGGCACAAATGAGGGAGAACGCTGTGGATTCAACTTaGTGCGCAGGTAATCTACGA | + |
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Preference number: 4 (lower is better) Translates to: LTNRFDHSMRKWAQMRENAVDST*CAGNLR Trigger: TCGTAGATTACCTGCGCAGCAAGTTGAATCCACAGC...GTTCTCCCTCATTTGTGCCCATTTTCTCATACTGTGATCAAACCTATTCGTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| CDS-3UTR GCA 90 bp | GTGACAAAGTTGTTGTTTACATTTGTTGAACCAGAGCTAGTCCTTGAGATTGCTTTTTTCTTCTGTGGATaGCATTGCCTGCCCTACTCG | + |
|
Preference number: 4 (lower is better) Translates to: VTKLLFTFVEPELVLEIAFFFCG*HCLPYS Trigger: CGAGTAGGGCAGGCAATGGCATCCACAGAAGAAAAA...AGCAATCTCAAGGACTAGCTCTGGTTCAACAAATGTAAACAACAACTTTGTCAC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR CCA 90 bp | ATTCTATGGGTACTAGGAATGCACATGATACACATATATGTGGTAAAACACCCATGGCAGCCCAATAGATaGAACCAGTCTTCACTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ILWVLGMHMIHIYVVKHPWQPNR*NQSSLP Trigger: AGGCAGTGAAGACTGGTTCCATCTATTGGGCTGCCA...TGGGTGTTTTACCACATATATGTGTATCATGTGCATTCCTAGTACCCATAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR CCA 90 bp | AGAGAAGAGCTCCAGAAATGTATTTCCCCTACATATAAGAAGATACTAAGACATAAGCGAGGGCACACTTaGCAGCCCAATAGATGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: REELQKCISPTYKKILRHKRGHT*QPNRWN Trigger: GTTCCATCTATTGGGCTGCCAAGTGTGCCCTCGCTT...ATGTCTTAGTATCTTCTTATATGTAGGGGAAATACATTTCTGGAGCTCTTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR CCA 90 bp | TATTTAGCAAGGGATTCAAAACCAAGTAATCAAGCCTCAAAGTGGTATATGAACGACCAGGTTGTGGGCTaGTGCTCAGAAACAGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: YLARDSKPSNQASKWYMNDQVVG*CSETDA Trigger: TGCATCTGTTTCTGAGCACCAGCCCACAACCTGGTC...GTTCATATACCACTTTGAGGCTTGATTACTTGGTTTTGAATCCCTTGCTAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR CCA 90 bp | TTAACGAATAGGTTTGATCACAGTATGAGAAAATGGGCACAAATGAGGGAGAACGACTTTTGCATCCTCTaGAGTATTGTGACGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTNRFDHSMRKWAQMRENDFCIL*SIVTEP Trigger: TGGCTCCGTCACAATACTCCAGAGGATGCAAAAGTC...GTTCTCCCTCATTTGTGCCCATTTTCTCATACTGTGATCAAACCTATTCGTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR TCA 90 bp | CACTTCTGTGATCCTCGTATCAGCCAATTTAAGTCAAAACAAATAAGGCACATTAAATTGTTCCTCCAATaGTTCGGCCCAAAGGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: HFCDPRISQFKSKQIRHIKLFLQ*FGPKGT Trigger: GGTACCCTTTGGGCCGAATCATTGGAGGAACAATTT...AATGTGCCTTATTTGTTTTGACTTAAATTGGCTGATACGAGGATCACAGAAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR TCA 90 bp | GTGACAAAGTTGTTGTTTACATTTGTTGAACCAGAGCTAGTCCTTGAGATTGCTGTAGAGGAATCAAGTTaGTCAGGAACACATAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTKLLFTFVEPELVLEIAVEESS*SGTHSL Trigger: GAGGCTATGTGTTCCTGATCAACTTGATTCCTCTAC...AGCAATCTCAAGGACTAGCTCTGGTTCAACAAATGTAAACAACAACTTTGTCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120381.9 ENSMUST00000135934.2 |
||
| CDS-3UTR TCA 90 bp | AGAACAGTAACAGATGATAGTAAAAATGGTGTCACAAAACATAGGGCAGTGGTTACGAAAGCATGGATCTaGCAGAGACCAAACACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RTVTDDSKNGVTKHRAVVTKAWI*QRPNTP Trigger: TGGAGTGTTTGGTCTCTGTCAGATCCATGCTTTCGT...AACCACTGCCCTATGTTTTGTGACACCATTTTTACTATCATCTGTTACTGTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR TCA 90 bp | ATTCTATGGGTACTAGGAATGCACATGATACACATATATGTGGTAAAACACCCAGGCCAACTGGAAACATaGAGACAAGGAGCTGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ILWVLGMHMIHIYVVKHPGQLET*RQGAVD Trigger: ATCTACAGCTCCTTGTCTTCATGTTTCCAGTTGGCC...TGGGTGTTTTACCACATATATGTGTATCATGTGCATTCCTAGTACCCATAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR GCA 90 bp | TTAACGAATAGGTTTGATCACAGTATGAGAAAATGGGCACAAATGAGGGAGAACGGAACCAGTCTTCACTaGCTTGATCCACATGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LTNRFDHSMRKWAQMRENGTSLH*LDPHVV Trigger: TACTACATGTGGATCAAGGCAGTGAAGACTGGTTCC...GTTCTCCCTCATTTGTGCCCATTTTCTCATACTGTGATCAAACCTATTCGTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR GCA 90 bp | GTGACAAAGTTGTTGTTTACATTTGTTGAACCAGAGCTAGTCCTTGAGATTGCTGGAACCAGTCTTCACTaGCTTGATCCACATGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VTKLLFTFVEPELVLEIAGTSLH*LDPHVV Trigger: TACTACATGTGGATCAAGGCAGTGAAGACTGGTTCC...AGCAATCTCAAGGACTAGCTCTGGTTCAACAAATGTAAACAACAACTTTGTCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120381.9 ENSMUST00000135934.2 |
||
| CDS-3UTR GCA 90 bp | CACTTCTGTGATCCTCGTATCAGCCAATTTAAGTCAAAACAAATAAGGCACATTCAGGTTGTGGGCTGGTaGTCAGAAACAGATGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: HFCDPRISQFKSKQIRHIQVVGW*SETDAI Trigger: TATTGCATCTGTTTCTGAGCACCAGCCCACAACCTG...AATGTGCCTTATTTGTTTTGACTTAAATTGGCTGATACGAGGATCACAGAAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR GCA 90 bp | ATTCTATGGGTACTAGGAATGCACATGATACACATATATGTGGTAAAACACCCAAATCCTGTTGCTTCTTaGTCTTCTTGTCTGGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: ILWVLGMHMIHIYVVKHPNPVAS*SSCLGD Trigger: GTCGCCCAGACAAGAAGAGCAAGAAGCAACAGGATT...TGGGTGTTTTACCACATATATGTGTATCATGTGCATTCCTAGTACCCATAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR GCA 90 bp | CACTTCTGTGATCCTCGTATCAGCCAATTTAAGTCAAAACAAATAAGGCACATTTTCTGTGGATGCCATTaGCTGCCCTACTCGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HFCDPRISQFKSKQIRHIFCGCH*LPYSRN Trigger: ATTTCTCGAGTAGGGCAGGCAATGGCATCCACAGAA...AATGTGCCTTATTTGTTTTGACTTAAATTGGCTGATACGAGGATCACAGAAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR CCA 90 bp | AGGAGAATCAGGAATTCAAAGCCAGCCCTAGCTATAAAAGATACTGTCTCAAAAGATGAAAGGACGGGCTaGAAACCAACAAAGGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: RRIRNSKPALAIKDTVSKDERTG*KPTKEI Trigger: GATTTCCTTTGTTGGTTTCCAGCCCGTCCTTTCATC...TTTTGAGACAGTATCTTTTATAGCTAGGGCTGGCTTTGAATTCCTGATTCTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR CCA 90 bp | AGAACAGTAACAGATGATAGTAAAAATGGTGTCACAAAACATAGGGCAGTGGTTTATGTGGACAGCACCTaGGAAACACCAATGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RTVTDDSKNGVTKHRAVVYVDST*ETPMPE Trigger: TTCTGGCATTGGTGTTTCCCAGGTGCTGTCCACATA...AACCACTGCCCTATGTTTTGTGACACCATTTTTACTATCATCTGTTACTGTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR TCA 90 bp | TATACAAGTACACCTAAGCACATATGCATTGAGTACCACTGTGACTATCTAAAAGGAAGTCATCAAAAATaGTCCTACTGCCATCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: YTSTPKHICIEYHCDYLKGSHQK*SYCHPH Trigger: GTGGGGATGGCAGTAGGATCATTTTTGATGACTTCC...TTTTAGATAGTCACAGTGGTACTCAATGCATATGTGCTTAGGTGTACTTGTATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR TCA 90 bp | TATTTAGCAAGGGATTCAAAACCAAGTAATCAAGCCTCAAAGTGGTATATGAACGCCATAATCCCACCATaGCATGACTTTTGCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YLARDSKPSNQASKWYMNAIIPP*HDFCIL Trigger: GAGGATGCAAAAGTCATGTCATGGTGGGATTATGGC...GTTCATATACCACTTTGAGGCTTGATTACTTGGTTTTGAATCCCTTGCTAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR GCA 90 bp | TTAACGAATAGGTTTGATCACAGTATGAGAAAATGGGCACAAATGAGGGAGAACCCAACAAAGGAAATCTaGATAGAAAGAATGGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LTNRFDHSMRKWAQMRENPTKEI*IERMVP Trigger: GGGCACCATTCTTTCTATGCAGATTTCCTTTGTTGG...GTTCTCCCTCATTTGTGCCCATTTTCTCATACTGTGATCAAACCTATTCGTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR GCA 90 bp | GTGACAAAGTTGTTGTTTACATTTGTTGAACCAGAGCTAGTCCTTGAGATTGCTCCAACAAAGGAAATCTaGATAGAAAGAATGGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VTKLLFTFVEPELVLEIAPTKEI*IERMVP Trigger: GGGCACCATTCTTTCTATGCAGATTTCCTTTGTTGG...AGCAATCTCAAGGACTAGCTCTGGTTCAACAAATGTAAACAACAACTTTGTCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120381.9 ENSMUST00000135934.2 |
||
| CDS-3UTR GCA 90 bp | AGAACAGTAACAGATGATAGTAAAAATGGTGTCACAAAACATAGGGCAGTGGTTGTGGATTCAACTTGCTaGGCAGGTAATCTACGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RTVTDDSKNGVTKHRAVVVDSTC*AGNLRK Trigger: CTTTCGTAGATTACCTGCGCAGCAAGTTGAATCCAC...AACCACTGCCCTATGTTTTGTGACACCATTTTTACTATCATCTGTTACTGTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR CCA 90 bp | ATTCTATGGGTACTAGGAATGCACATGATACACATATATGTGGTAAAACACCCACTTGCTCTTCTTGTCTaGGCGACTTATGTCCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: ILWVLGMHMIHIYVVKHPLALLV*ATYVQI Trigger: AATCTGGACATAAGTCGCCCAGACAAGAAGAGCAAG...TGGGTGTTTTACCACATATATGTGTATCATGTGCATTCCTAGTACCCATAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR CCA 90 bp | AGAACAGTAACAGATGATAGTAAAAATGGTGTCACAAAACATAGGGCAGTGGTTGAGCAGACAGAACAATaGAGGGAGAAGAATAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RTVTDDSKNGVTKHRAVVEQTEQ*REKNRL Trigger: AAGCCTATTCTTCTCCCTCCATTGTTCTGTCTGCTC...AACCACTGCCCTATGTTTTGTGACACCATTTTTACTATCATCTGTTACTGTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| 3UTR CAA 72 bp | TCACCCACAGTTAAAATACACAGTACATACACCGGTTaGAAGGAAAAGCCCTTAGGTATACAAGTACACCTA | + |
|
Preference number: 4 (lower is better) Translates to: SPTVKIHSTYTG*KEKPLGIQVHL Trigger: TAGGTGTACTTGTATACCTAAGGGCTTTTCCTTCAAACCGGTGTATGTACTGTGTATTTTAACTGTGGGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR TCA 90 bp | GTAACAGATGATAGTAAAAATGGTGTCACAAAACATAGGGCAGTGGTTCTCAACGATCAAACTCATGGATaGCACTTTCAAATCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VTDDSKNGVTKHRAVVLNDQTHG*HFQISA Trigger: TGCTGAGATTTGAAAGTGTCATCCATGAGTTTGATC...GTTGAGAACCACTGCCCTATGTTTTGTGACACCATTTTTACTATCATCTGTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR TCA 90 bp | AGAGAAGAGCTCCAGAAATGTATTTCCCCTACATATAAGAAGATACTAAGACATGTAGAGGAATCAAGTTaGTCAGGAACACATAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: REELQKCISPTYKKILRHVEESS*SGTHSL Trigger: GAGGCTATGTGTTCCTGATCAACTTGATTCCTCTAC...ATGTCTTAGTATCTTCTTATATGTAGGGGAAATACATTTCTGGAGCTCTTCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR CCA 90 bp | TATACAAGTACACCTAAGCACATATGCATTGAGTACCACTGTGACTATCTAAAAAACTTCGAATTGCTGTaGATTCAACTTGCTGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YTSTPKHICIEYHCDYLKNFELL*IQLAAQ Trigger: CTGCGCAGCAAGTTGAATCCACAGCAATTCGAAGTT...TTTTAGATAGTCACAGTGGTACTCAATGCATATGTGCTTAGGTGTACTTGTATA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR CCA 90 bp | GTGACAAAGTTGTTGTTTACATTTGTTGAACCAGAGCTAGTCCTTGAGATTGCTTACGGATCAAACTCATaGATGACACTTTCAAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTKLLFTFVEPELVLEIAYGSNS*MTLSNL Trigger: GAGATTTGAAAGTGTCATCCATGAGTTTGATCCGTA...AGCAATCTCAAGGACTAGCTCTGGTTCAACAAATGTAAACAACAACTTTGTCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR CCA 90 bp | TATACAAGTACACCTAAGCACATATGCATTGAGTACCACTGTGACTATCTAAAAGTAATAGAGGCCAACTaGAAACATGAAGACAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YTSTPKHICIEYHCDYLKVIEAN*KHEDKE Trigger: CTCCTTGTCTTCATGTTTCCAGTTGGCCTCTATTAC...TTTTAGATAGTCACAGTGGTACTCAATGCATATGTGCTTAGGTGTACTTGTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR GCA 90 bp | AGAACAGTAACAGATGATAGTAAAAATGGTGTCACAAAACATAGGGCAGTGGTTAAAAGAACTTCGAATTaGTGTGGATTCAACTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RTVTDDSKNGVTKHRAVVKRTSN*CGFNLL Trigger: CAGCAAGTTGAATCCACAGCAATTCGAAGTTCTTTT...AACCACTGCCCTATGTTTTGTGACACCATTTTTACTATCATCTGTTACTGTTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR CCA 90 bp | AGAACAGTAACAGATGATAGTAAAAATGGTGTCACAAAACATAGGGCAGTGGTTATGTCAATGGTGATATaGAAGAAATGGAGTACATGG | + |
|
Preference number: 4 (lower is better) Translates to: RTVTDDSKNGVTKHRAVVMSMVI*KKWSTW Trigger: CCATGTACTCCATTTCTTCCATATCACCATTGACAT...AACCACTGCCCTATGTTTTGTGACACCATTTTTACTATCATCTGTTACTGTTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR GCA 90 bp | ATTCTATGGGTACTAGGAATGCACATGATACACATATATGTGGTAAAACACCCAGTGCTCAGAAACAGATaGAATAATGGGAATGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: ILWVLGMHMIHIYVVKHPVLRNR*NNGNVI Trigger: AATAACATTCCCATTATTGCATCTGTTTCTGAGCAC...TGGGTGTTTTACCACATATATGTGTATCATGTGCATTCCTAGTACCCATAGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR CCA 90 bp | TATTTAGCAAGGGATTCAAAACCAAGTAATCAAGCCTCAAAGTGGTATATGAACCCTACTCGAGAAATATaGGTATTATTCCATGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: YLARDSKPSNQASKWYMNPTREI*VLFHVL Trigger: TAACACATGGAATAATACCCATATTTCTCGAGTAGG...GTTCATATACCACTTTGAGGCTTGATTACTTGGTTTTGAATCCCTTGCTAAATA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR CAA 90 bp | CCAGACCTGGAAGCAAGAGTCTCTGGCGAGTGCTGGCTGGGTGTGTGGGTGGGCTCCAGGTCCTTTACCTaGTATATCCTGACTAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PDLEARVSGECWLGVWVGSRSFT*YILTSQ Trigger: CTGGCTAGTCAGGATATACAAGGTAAAGGACCTGGA...GCCCACCCACACACCCAGCCAGCACTCGCCAGAGACTCTTGCTTCCAGGTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR CAA 90 bp | CCAGACCTGGAAGCAAGAGTCTCTGGCGAGTGCTGGCTGGGTGTGTGGGTGGGCGAAAAGAACTTCGAATaGCTGTGGATTCAACTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PDLEARVSGECWLGVWVGEKNFE*LWIQLA Trigger: AGCAAGTTGAATCCACAGCAATTCGAAGTTCTTTTC...GCCCACCCACACACCCAGCCAGCACTCGCCAGAGACTCTTGCTTCCAGGTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS TCA 90 bp | TATTGTGACGGAGCCAATAATACGCTTCTCGGAAGTCATCAAAAATaGTCCTACTGCCATCCCCACCACGAGCAGACAGAACAATGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: YCDGANNTLLGSHQK*SYCHPHHEQTEQWR Trigger: CCTCCATTGTTCTGTCTGCTCGTGGTGGGGATGGCAGTAGGATCATTTTTGATGACTTCCGAGAAGCGTATTATTGGCTCCGTCACAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS CCA 90 bp | GCCAACCAGGGAGATAACACTCCGGAAAAGAACTTCGAATTGCTGTaGATTCAACTTGCTGCGCAGGTAATCTACGAAAGCATGGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: ANQGDNTPEKNFELL*IQLAAQVIYESMDL Trigger: CAGATCCATGCTTTCGTAGATTACCTGCGCAGCAAGTTGAATCCACAGCAATTCGAAGTTCTTTTCCGGAGTGTTATCTCCCTGGTTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS TCA 90 bp | AACGGCCTGTCAGCATTAGCACCAGGACATGTAGAGGAATCAAGTTaGTCAGGAACACATAGCCTCCCCATGAAGAGACCATGTAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: NGLSALAPGHVEESS*SGTHSLPMKRPCRN Trigger: ATTTCTACATGGTCTCTTCATGGGGAGGCTATGTGTTCCTGATCAACTTGATTCCTCTACATGTCCTGGTGCTAATGCTGACAGGCCGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120381.9 ENSMUST00000135934.2 |
||
| CDS-3UTR CAA 90 bp | AGGAGAATCAGGAATTCAAAGCCAGCCCTAGCTATAAAAGATACTGTCTCAAAACCAGCTCCTGCATCCTaGAGCTCTTTGGTAAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RRIRNSKPALAIKDTVSKPAPAS*SSLVRW Trigger: CCACCTTACCAAAGAGCTCAAGGATGCAGGAGCTGG...TTTTGAGACAGTATCTTTTATAGCTAGGGCTGGCTTTGAATTCCTGATTCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR CAA 90 bp | AGGAGAATCAGGAATTCAAAGCCAGCCCTAGCTATAAAAGATACTGTCTCAAAAAGTAGGAAGACCAGGTaGTGGGCTGGTGCTCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RRIRNSKPALAIKDTVSKSRKTR*WAGAQK Trigger: TTTCTGAGCACCAGCCCACAACCTGGTCTTCCTACT...TTTTGAGACAGTATCTTTTATAGCTAGGGCTGGCTTTGAATTCCTGATTCTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR CAA 90 bp | TTAACGAATAGGTTTGATCACAGTATGAGAAAATGGGCACAAATGAGGGAGAACTTGTACATAAGGCAGTaGAGCAGCACCGGAGAACCC | + |
|
Preference number: 5 (lower is better) Translates to: LTNRFDHSMRKWAQMRENLYIRQ*SSTGEP Trigger: GGGTTCTCCGGTGCTGCTCAACTGCCTTATGTACAA...GTTCTCCCTCATTTGTGCCCATTTTCTCATACTGTGATCAAACCTATTCGTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS GCA 90 bp | AAAATAGTAGGAAGACCAGGTTGTGGGCTGGTGCTCAGAAACAGATaGAATAATGGGAATGTTATTCTTAGCATAAGAGGGATCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KIVGRPGCGLVLRNR*NNGNVILSIRGIQQ Trigger: CTGCTGGATCCCTCTTATGCTAAGAATAACATTCCCATTATTGCATCTGTTTCTGAGCACCAGCCCACAACCTGGTCTTCCTACTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR CAA 90 bp | GTGACAAAGTTGTTGTTTACATTTGTTGAACCAGAGCTAGTCCTTGAGATTGCTGAATCCTGTTGCTTCTaGCTCTTCTTGTCTGGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: VTKLLFTFVEPELVLEIAESCCF*LFLSGR Trigger: TCGCCCAGACAAGAAGAGCAAGAAGCAACAGGATTC...AGCAATCTCAAGGACTAGCTCTGGTTCAACAAATGTAAACAACAACTTTGTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS CCA 90 bp | CTTAATAGGGTAAGTAGAATCCTGTTGCTTCTTGCTCTTCTTGTCTaGGCGACTTATGTCCAGATTTTTCATATATGTGGACAGCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: LNRVSRILLLLALLV*ATYVQIFHICGQHL Trigger: CAGGTGCTGTCCACATATATGAAAAATCTGGACATAAGTCGCCCAGACAAGAAGAGCAAGAAGCAACAGGATTCTACTTACCCTATTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR CAA 90 bp | AGAACAGTAACAGATGATAGTAAAAATGGTGTCACAAAACATAGGGCAGTGGTTTGCTTCTTGCTCTTCTaGTCTGGGCGACTTATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RTVTDDSKNGVTKHRAVVCFLLF*SGRLMS Trigger: GGACATAAGTCGCCCAGACAAGAAGAGCAAGAAGCA...AACCACTGCCCTATGTTTTGTGACACCATTTTTACTATCATCTGTTACTGTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
||
| CDS-3UTR CAA 90 bp | AGAACAGTAACAGATGATAGTAAAAATGGTGTCACAAAACATAGGGCAGTGGTTGTAAGTAGAATCCTGTaGCTTCTTGCTCTTCTTGTC | + |
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Preference number: 5 (lower is better) Translates to: RTVTDDSKNGVTKHRAVVVSRIL*LLALLV Trigger: GACAAGAAGAGCAAGAAGCAACAGGATTCTACTTAC...AACCACTGCCCTATGTTTTGTGACACCATTTTTACTATCATCTGTTACTGTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| CDS-3UTR CAA 90 bp | TATTTAGCAAGGGATTCAAAACCAAGTAATCAAGCCTCAAAGTGGTATATGAACTATTGTCCACTAAAATaGTCCGATTTGCCATTGCAG | + |
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Preference number: 5 (lower is better) Translates to: YLARDSKPSNQASKWYMNYCPLK*SDLPLQ Trigger: CTGCAATGGCAAATCGGACAATTTTAGTGGACAATA...GTTCATATACCACTTTGAGGCTTGATTACTTGGTTTTGAATCCCTTGCTAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| CDS CCA 72 bp | TCCTACTGCCATCCCCACCACGAGCAGACAGAACAATaGAGGGAGAAGAATAGGCTTCACTGGTCACCCAAG | + |
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Preference number: 6 (lower is better) Translates to: SYCHPHHEQTEQ*REKNRLHWSPK Trigger: CTTGGGTGACCAGTGAAGCCTATTCTTCTCCCTCCATTGTTCTGTCTGCTCGTGGTGGGGATGGCAGTAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| CDS CCA 72 bp | ATTACCAATCTCAGCATTTCGAACACGGTCAAAGCCTaGTGGACGCTTGGCTTCTGTGTAGACCTGCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: ITNLSISNTVKA*WTLGFCVDLPK Trigger: TTTGGGCAGGTCTACACAGAAGCCAAGCGTCCACCAGGCTTTGACCGTGTTCGAAATGCTGAGATTGGTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| CDS TCA 72 bp | GGAGCCAATAATACGCTTCTCGGAAGTCATCAAAAATaGTCCTACTGCCATCCCCACCACGAGCAGACAGAA | + |
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Preference number: 6 (lower is better) Translates to: GANNTLLGSHQK*SYCHPHHEQTE Trigger: TTCTGTCTGCTCGTGGTGGGGATGGCAGTAGGATCATTTTTGATGACTTCCGAGAAGCGTATTATTGGCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| CDS CCA 72 bp | ATGAAGAGACCATGTAGAAATAAGCGAGGGCACACTTaGCAGCCCAATAGATGGAACCAGTCTTCACTGCCT | + |
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Preference number: 6 (lower is better) Translates to: MKRPCRNKRGHT*QPNRWNQSSLP Trigger: AGGCAGTGAAGACTGGTTCCATCTATTGGGCTGCCAAGTGTGCCCTCGCTTATTTCTACATGGTCTCTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120381.9 ENSMUST00000135934.2 |
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| CDS CAA 90 bp | GACAAAGCCAACCAGGGAGATAACACTCCGGAAAAGAACTTCGAATaGCTGTGGATTCAACTTGCTGCGCAGGTAATCTACGAAAGCATG | + |
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Preference number: 6 (lower is better) Translates to: DKANQGDNTPEKNFE*LWIQLAAQVIYESM Trigger: CATGCTTTCGTAGATTACCTGCGCAGCAAGTTGAATCCACAGCAATTCGAAGTTCTTTTCCGGAGTGTTATCTCCCTGGTTGGCTTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| CDS TCA 72 bp | AGAAGCCCAGCTCCTGCATCGGATCAAACTCATGGATaGCACTTTCAAATCTCAGCACAGCAAAAAGACGAG | + |
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Preference number: 6 (lower is better) Translates to: RSPAPASDQTHG*HFQISAQQKDE Trigger: CTCGTCTTTTTGCTGTGCTGAGATTTGAAAGTGTCATCCATGAGTTTGATCCGATGCAGGAGCTGGGCTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217599.2 |
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| CDS GCA 72 bp | TCCGGAAAAGAACTTCGAATTGCTGTGGATTCAACTTaGTGCGCAGGTAATCTACGAAAGCATGGATCTGAC | + |
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Preference number: 6 (lower is better) Translates to: SGKELRIAVDST*CAGNLRKHGSD Trigger: GTCAGATCCATGCTTTCGTAGATTACCTGCGCAGCAAGTTGAATCCACAGCAATTCGAAGTTCTTTTCCGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| CDS CCA 72 bp | GGAGATAACACTCCGGAAAAGAACTTCGAATTGCTGTaGATTCAACTTGCTGCGCAGGTAATCTACGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: GDNTPEKNFELL*IQLAAQVIYES Trigger: GCTTTCGTAGATTACCTGCGCAGCAAGTTGAATCCACAGCAATTCGAAGTTCTTTTCCGGAGTGTTATCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| CDS CCA 72 bp | AGCAAGAAGCCCAGCTCCTGCATCGGATCAAACTCATaGATGACACTTTCAAATCTCAGCACAGCAAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: SKKPSSCIGSNS*MTLSNLSTAKR Trigger: TCTTTTTGCTGTGCTGAGATTTGAAAGTGTCATCCATGAGTTTGATCCGATGCAGGAGCTGGGCTTCTTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217599.2 |
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| CDS CAA 72 bp | AACCAGGGAGATAACACTCCGGAAAAGAACTTCGAATaGCTGTGGATTCAACTTGCTGCGCAGGTAATCTAC | + |
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Preference number: 6 (lower is better) Translates to: NQGDNTPEKNFE*LWIQLAAQVIY Trigger: GTAGATTACCTGCGCAGCAAGTTGAATCCACAGCAATTCGAAGTTCTTTTCCGGAGTGTTATCTCCCTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| CDS CAA 72 bp | CGCCACCTCATTCTTAATAGGGTAAGTAGAATCCTGTaGCTTCTTGCTCTTCTTGTCTGGGCGACTTATGTC | + |
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Preference number: 6 (lower is better) Translates to: RHLILNRVSRIL*LLALLVWATYV Trigger: GACATAAGTCGCCCAGACAAGAAGAGCAAGAAGCAACAGGATTCTACTTACCCTATTAAGAATGAGGTGGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| CDS CAA 90 bp | CATCCCACTCGCCACCTCATTCTTAATAGGGTAAGTAGAATCCTGTaGCTTCTTGCTCTTCTTGTCTGGGCGACTTATGTCCAGATTTTT | + |
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Preference number: 6 (lower is better) Translates to: HPTRHLILNRVSRIL*LLALLVWATYVQIF Trigger: AAAAATCTGGACATAAGTCGCCCAGACAAGAAGAGCAAGAAGCAACAGGATTCTACTTACCCTATTAAGAATGAGGTGGCGAGTGGGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| CDS GCA 72 bp | GGAAAAGAACTTCGAATTGCTGTGGATTCAACTTGCTaGGCAGGTAATCTACGAAAGCATGGATCTGACAGA | + |
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Preference number: 6 (lower is better) Translates to: GKELRIAVDSTC*AGNLRKHGSDR Trigger: TCTGTCAGATCCATGCTTTCGTAGATTACCTGCGCAGCAAGTTGAATCCACAGCAATTCGAAGTTCTTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| CDS CCA 72 bp | TGTCTGGGCGACTTATGTCCAGATTTTTCATATATGTaGACAGCACCTGGGAAACACCAATGCCAGAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: CLGDLCPDFSYM*TAPGKHQCQKE Trigger: TTCTTTCTGGCATTGGTGTTTCCCAGGTGCTGTCCACATATATGAAAAATCTGGACATAAGTCGCCCAGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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| CDS CCA 72 bp | GTAAGTAGAATCCTGTTGCTTCTTGCTCTTCTTGTCTaGGCGACTTATGTCCAGATTTTTCATATATGTGGA | + |
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Preference number: 6 (lower is better) Translates to: VSRILLLLALLV*ATYVQIFHICG Trigger: TCCACATATATGAAAAATCTGGACATAAGTCGCCCAGACAAGAAGAGCAAGAAGCAACAGGATTCTACTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120381.9 |
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