Pregenerated sensors for STRN4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030374Ensembl transcript IDs: ENSMUST00000019220.16, ENSMUST00000108495.9, ENSMUST00000184280.8, ENSMUST00000184694.2, ENSMUST00000184708.8, ENSMUST00000185011.8
Found 345 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCCAGATGCGGACGGTGCCATCGGCAGAGCAGGATGCTAGGCGCTaGGAGGTGGGACTGAAGGCCAGACCCCACACAGCATCCCCATGG | + |
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Preference number: 1 (lower is better) Translates to: SQMRTVPSAEQDARR*EVGLKARPHTASPW Trigger: CCATGGGGATGCTGTGTGGGGTCTGGCCTTCAGTCCCACCTCCCAGCGCCTAGCATCCTGCTCTGCCGATGGCACCGTCCGCATCTGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
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| 3UTR TCA 90 bp | CGGTGCCATCGGCAGAGCAGGATGCTAGGCGCTGGGAGGTGGGACTaGAGGCCAGACCCCACACAGCATCCCCATGGCCTTCCAGGACAT | + |
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Preference number: 1 (lower is better) Translates to: RCHRQSRMLGAGRWD*RPDPTQHPHGLPGH Trigger: ATGTCCTGGAAGGCCATGGGGATGCTGTGTGGGGTCTGGCCTTCAGTCCCACCTCCCAGCGCCTAGCATCCTGCTCTGCCGATGGCACCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
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| 3UTR GCA 90 bp | GGAAGGTACAGAGGCAGCTTGGACCACTGCTGCTGGGATCCCAGATaGGGACGGTGCCATCGGCAGAGCAGGATGCTAGGCGCTGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: GRYRGSLDHCCWDPR*GRCHRQSRMLGAGR Trigger: CCTCCCAGCGCCTAGCATCCTGCTCTGCCGATGGCACCGTCCGCATCTGGGATCCCAGCAGCAGTGGTCCAAGCTGCCTCTGTACCTTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
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| 3UTR CCA 90 bp | CACAGGGCCCACTCCACCCTCTCTCTACATCTCAAGGAGGGCCTGTaGCTAGGACAATGCCCCAGAGGAGTGGAGGCCCTTCCCAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: HRAHSTLSLHLKEGL*LGQCPRGVEALPRK Trigger: CTTCCTGGGAAGGGCCTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTTGAGATGTAGAGAGAGGGTGGAGTGGGCCCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| 3UTR GCA 90 bp | AGCCCCACCACTGTAACAGTACTCGCTGTTGCTGCCCATGGTGACTaGCAGCACCGGGCCCCTGTGAGCTCGGAAAGCATGAATCGGCTC | + |
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Preference number: 1 (lower is better) Translates to: SPTTVTVLAVAAHGD*QHRAPVSSESMNRL Trigger: GAGCCGATTCATGCTTTCCGAGCTCACAGGGGCCCGGTGCTGGCAGTCACCATGGGCAGCAACAGCGAGTACTGTTACAGTGGTGGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000184708.8 ENSMUST00000185011.8 |
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| 3UTR GCA 90 bp | GTTCTCCATCCATGGGGAAGGTACAGAGGCAGCTTGGACCACTGCTaGTGGGATCCCAGATGCGGACGGTGCCATCGGCAGAGCAGGATG | + |
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Preference number: 1 (lower is better) Translates to: VLHPWGRYRGSLDHC*WDPRCGRCHRQSRM Trigger: CATCCTGCTCTGCCGATGGCACCGTCCGCATCTGGGATCCCAGCAGCAGTGGTCCAAGCTGCCTCTGTACCTTCCCCATGGATGGAGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
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| 3UTR GCA 90 bp | TCCTCATCGCTGTCTTCATCCTCGCAGTTCTGCAGGAAGGGTATCTaGTCCAGCACCGAGCCACCCAGGCGCTCCTTGCCATCTTTGCCA | + |
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Preference number: 1 (lower is better) Translates to: SSSLSSSSQFCRKGI*SSTEPPRRSLPSLP Trigger: TGGCAAAGATGGCAAGGAGCGCCTGGGTGGCTCGGTGCTGGAGCAGATACCCTTCCTGCAGAACTGCGAGGATGAAGACAGCGATGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184280.8 |
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| 3UTR GCA 90 bp | CTGTCCAGTTCATCATCCTCATCGCTGTCTTCATCCTCGCAGTTCTaGAGGAAGGGTATCTGCTCCAGCACCGAGCCACCCAGGCGCTCC | + |
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Preference number: 1 (lower is better) Translates to: LSSSSSSSLSSSSQF*RKGICSSTEPPRRS Trigger: GGAGCGCCTGGGTGGCTCGGTGCTGGAGCAGATACCCTTCCTGCAGAACTGCGAGGATGAAGACAGCGATGAGGATGATGAACTGGACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184280.8 |
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| 3UTR TCA 90 bp | CACCAGAACGAAAGGAGGCCACGACATGGGCAGGTTCAGTGCTGGTaGAGGCCACTGAGGTGGGAATTCCATGTTCTCCATCCATGGGGA | + |
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Preference number: 1 (lower is better) Translates to: HQNERRPRHGQVQCW*RPLRWEFHVLHPWG Trigger: TCCCCATGGATGGAGAACATGGAATTCCCACCTCAGTGGCCTTCACCAGCACTGAACCTGCCCATGTCGTGGCCTCCTTTCGTTCTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
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| 3UTR TCA 90 bp | AAGGACACTGGGTGTCTGCATTCCTATCTAGAACACAAATGGCCCTaGTCCTTACCTCAGCCCCACTGCCTGGCCCCGCTCCCTGACACT | + |
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Preference number: 1 (lower is better) Translates to: KDTGCLHSYLEHKWP*SLPQPHCLAPLPDT Trigger: AGTGTCAGGGAGCGGGGCCAGGCAGTGGGGCTGAGGTAAGGATCAGGGCCATTTGTGTTCTAGATAGGAATGCAGACACCCAGTGTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
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| 3UTR TCA 90 bp | CATGGCTCAGCACACTTGGGTCATAGCCATCATATGGGTCCATGTTaGGGTCAGGAATCTTCCAGCTGTGGATCCTGGCATCAGCCCCAC | + |
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Preference number: 1 (lower is better) Translates to: HGSAHLGHSHHMGPC*GQESSSCGSWHQPH Trigger: GTGGGGCTGATGCCAGGATCCACAGCTGGAAGATTCCTGACCTCAACATGGACCCATATGATGGCTATGACCCAAGTGTGCTGAGCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
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| 3UTR CCA 90 bp | GAGACCCCTCTCTGCACAGCCCTTCATCTGATGAATGAGGGAGGGTaGCACTCTAGGAGGGAGCCTGGCATCTTCTTTCATCTTGGTCAA | + |
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Preference number: 1 (lower is better) Translates to: ETPLCTALHLMNEGG*HSRREPGIFFHLGQ Trigger: TTGACCAAGATGAAAGAAGATGCCAGGCTCCCTCCTAGAGTGCCACCCTCCCTCATTCATCAGATGAAGGGCTGTGCAGAGAGGGGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| 3UTR GCA 90 bp | GGCTCCACATCCAGTGCAGCATTTTTCTTGGCCGTAACTGCCTTCTaGAGGTTCCACAGTTTGAGTGTGCCATCCTCAGAGGCAGTAAGC | + |
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Preference number: 1 (lower is better) Translates to: GSTSSAAFFLAVTAF*RFHSLSVPSSEAVS Trigger: GCTTACTGCCTCTGAGGATGGCACACTCAAACTGTGGAACCTGCAGAAGGCAGTTACGGCCAAGAAAAATGCTGCACTGGATGTGGAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000184708.8 ENSMUST00000185011.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGGAGGGCCTGTGGCTAGGACAATGCCCCAGAGGAGTGGAGGCCCTTCCCAGCTCAGCCCCACTGCCTaGCCCCGCTCCCTGACACTG | + |
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Preference number: 2 (lower is better) Translates to: QGGPVARTMPQRSGGPSQLSPTA*PRSLTL Trigger: CAGTGTCAGGGAGCGGGGCCAGGCAGTGGGGCTGAG...CTGGGAAGGGCCTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| 3UTR-3UTR TCA 90 bp | CCAAAGGACACCCAGCCTGGGCTGTGTCAAACTCAGGACGACAGCTATGTCAGGCCTGGCCCCGCTCCCTaGCACTGTGCAGCCAGGGCG | + |
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Preference number: 2 (lower is better) Translates to: PKDTQPGLCQTQDDSYVRPGPAP*HCAARA Trigger: CGCCCTGGCTGCACAGTGTCAGGGAGCGGGGCCAGG...CCTGACATAGCTGTCGTCCTGAGTTTGACACAGCCCAGGCTGGGTGTCCTTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| 3UTR-3UTR CCA 90 bp | ACATCTCAAGGAGGGCCTGTGGCTAGGACAATGCCCCAGAGGAGTGGAGGCCCTCTCAGCCCCACTGCCTaGCCCCGCTCCCTGACACTG | + |
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Preference number: 2 (lower is better) Translates to: TSQGGPVARTMPQRSGGPLSPTA*PRSLTL Trigger: CAGTGTCAGGGAGCGGGGCCAGGCAGTGGGGCTGAG...AGGGCCTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTTGAGATGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| 3UTR-3UTR CCA 90 bp | CTTGGACCACTGCTGCTGGGATCCCAGATGCGGACGGTGCCATCGGCAGAGCAGAGTGCTGACTGGCTGTaGTGGAAGGCCAGGGAGCGG | + |
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Preference number: 2 (lower is better) Translates to: LGPLLLGSQMRTVPSAEQSADWL*WKARER Trigger: CCGCTCCCTGGCCTTCCACCACAGCCAGTCAGCACT...CTGCTCTGCCGATGGCACCGTCCGCATCTGGGATCCCAGCAGCAGTGGTCCAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
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| 3UTR-3UTR GCA 90 bp | GGGGTGACTCCTGGGGAAAGGGCCTTTAGCACCACCAGGCTCCAGGAAGATGAACGCTCCCTGACACTGTaGAGCCAGGGCGAGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: GVTPGERAFSTTRLQEDERSLTL*SQGEAR Trigger: CCTGGCCTCGCCCTGGCTGCACAGTGTCAGGGAGCG...TTCATCTTCCTGGAGCCTGGTGGTGCTAAAGGCCCTTTCCCCAGGAGTCACCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCCAGCACCGGGCCCCTGTGAGCTCGGAAAGCATGAATCGGCTCCACATCCAGCTGACTGGCTGTGGTaGAAGGCCAGGGAGCGGATG | + |
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Preference number: 2 (lower is better) Translates to: LPAPGPCELGKHESAPHPADWLW*KARERM Trigger: CATCCGCTCCCTGGCCTTCCACCACAGCCAGTCAGC...TGGATGTGGAGCCGATTCATGCTTTCCGAGCTCACAGGGGCCCGGTGCTGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184708.8 ENSMUST00000185011.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGCAAGGCAGCTGGTTAGGACAGTGCCCCTCACTAGCTCCAATTCCTCCCTCCTCAGCCCCACTGCCTaGCCCCGCTCCCTGACACTG | + |
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Preference number: 2 (lower is better) Translates to: KARQLVRTVPLTSSNSSLLSPTA*PRSLTL Trigger: CAGTGTCAGGGAGCGGGGCCAGGCAGTGGGGCTGAG...GAGGGAGGAATTGGAGCTAGTGAGGGGCACTGTCCTAACCAGCTGCCTTGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
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| 3UTR-3UTR GCA 90 bp | AGGACACCCAGCCTGGGCTGTGTCAAACTCAGGACGACAGCTATGTCAGGAGTTCGCTCCCTGACACTGTaGAGCCAGGGCGAGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: RTPSLGCVKLRTTAMSGVRSLTL*SQGEAR Trigger: CCTGGCCTCGCCCTGGCTGCACAGTGTCAGGGAGCG...AACTCCTGACATAGCTGTCGTCCTGAGTTTGACACAGCCCAGGCTGGGTGTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| 3UTR-3UTR CCA 90 bp | CATGGTGACTGCCAGCACCGGGCCCCTGTGAGCTCGGAAAGCATGAATCGGCTCGTAAGCAGTGCTGACTaGCTGTGGTGGAAGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: HGDCQHRAPVSSESMNRLVSSAD*LWWKAR Trigger: CCTGGCCTTCCACCACAGCCAGTCAGCACTGCTTAC...GAGCCGATTCATGCTTTCCGAGCTCACAGGGGCCCGGTGCTGGCAGTCACCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184708.8 ENSMUST00000185011.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCCAGCACCGGGCCCCTGTGAGCTCGGAAAGCATGAATCGGCTCCACATCCAGCAGGTTCCACAGTTTaGGTGTGCCATCCTCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: LPAPGPCELGKHESAPHPAGSTV*VCHPQR Trigger: CCTCTGAGGATGGCACACTCAAACTGTGGAACCTGC...TGGATGTGGAGCCGATTCATGCTTTCCGAGCTCACAGGGGCCCGGTGCTGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184708.8 ENSMUST00000185011.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGGGCCTGTGGCTAGGACAATGCCCCAGAGGAGTGGAGGCCCTTCCCAGGAGCTATGTCAGGAGTTaGGGTTGGGGCATGAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: KEGLWLGQCPRGVEALPRSYVRS*GWGMSR Trigger: TCTGCTCATGCCCCAACCCCAACTCCTGACATAGCT...CCTGGGAAGGGCCTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| 3UTR-3UTR TCA 90 bp | ACATGGGCAGGTTCAGTGCTGGTGAAGGCCACTGAGGTGGGAATTCCATGTTCTGCTGGGAGGTGGGACTaGAGGCCAGACCCCACACAG | + |
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Preference number: 2 (lower is better) Translates to: TWAGSVLVKATEVGIPCSAGRWD*RPDPTQ Trigger: CTGTGTGGGGTCTGGCCTTCAGTCCCACCTCCCAGC...AGAACATGGAATTCCCACCTCAGTGGCCTTCACCAGCACTGAACCTGCCCATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
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| 3UTR-3UTR GCA 90 bp | GGTGGGAATTCCATGTTCTCCATCCATGGGGAAGGTACAGAGGCAGCTTGGACCTGCTGGGATCCCAGATaGGGACGGTGCCATCGGCAG | + |
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Preference number: 2 (lower is better) Translates to: GGNSMFSIHGEGTEAAWTCWDPR*GRCHRQ Trigger: CTGCCGATGGCACCGTCCGCATCTGGGATCCCAGCA...GGTCCAAGCTGCCTCTGTACCTTCCCCATGGATGGAGAACATGGAATTCCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGCACAGGGCCCACTCCACCCTCTCTCTACATCTCAAGGAGGGCCTGTGGCTGGGAAGCAAGAGGAATaGACTGAGGTCCAAAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: GAQGPLHPLSTSQGGPVAGKQEE*TEVQKD Trigger: GTCCTTTTGGACCTCAGTCCATTCCTCTTGCTTCCC...AGCCACAGGCCCTCCTTGAGATGTAGAGAGAGGGTGGAGTGGGCCCTGTGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| 3UTR-3UTR CCA 90 bp | GGGCGCTGCCAGCTTCCAGGTCATAAAGAACGGTATCACCAGAACGAAAGGAGGGCTGACTGGCTGTGGTaGAAGGCCAGGGAGCGGATG | + |
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Preference number: 2 (lower is better) Translates to: GRCQLPGHKERYHQNERRADWLW*KARERM Trigger: CATCCGCTCCCTGGCCTTCCACCACAGCCAGTCAGC...CCTCCTTTCGTTCTGGTGATACCGTTCTTTATGACCTGGAAGCTGGCAGCGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
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| 3UTR CAA 90 bp | TGCAGGAAGGGTATCTGCTCCAGCACCGAGCCACCCAGGCGCTCCTaGCCATCTTTGCCAGCTGCATTCCTCTTGATCTGTTCCTCGATC | + |
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Preference number: 2 (lower is better) Translates to: CRKGICSSTEPPRRS*PSLPAAFLLICSSI Trigger: GATCGAGGAACAGATCAAGAGGAATGCAGCTGGCAAAGATGGCAAGGAGCGCCTGGGTGGCTCGGTGCTGGAGCAGATACCCTTCCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184280.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGCCACGACATGGGCAGGTTCAGTGCTGGTGAAGGCCACTGAGGTGGGAATTGCAGGTTCCACAGTTTaGGTGTGCCATCCTCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: EATTWAGSVLVKATEVGIAGSTV*VCHPQR Trigger: CCTCTGAGGATGGCACACTCAAACTGTGGAACCTGC...AATTCCCACCTCAGTGGCCTTCACCAGCACTGAACCTGCCCATGTCGTGGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
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| 3UTR-3UTR GCA 90 bp | CATGGTGACTGCCAGCACCGGGCCCCTGTGAGCTCGGAAAGCATGAATCGGCTCTTTCTTGGCCGTAACTaGCTTCTGCAGGTTCCACAG | + |
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Preference number: 2 (lower is better) Translates to: HGDCQHRAPVSSESMNRLFLGRN*LLQVPQ Trigger: CTGTGGAACCTGCAGAAGGCAGTTACGGCCAAGAAA...GAGCCGATTCATGCTTTCCGAGCTCACAGGGGCCCGGTGCTGGCAGTCACCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184708.8 ENSMUST00000185011.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGCCCACTCCACCCTCTCTCTACATCTCAAGGAGGGCCTGTGGCTAGGACAAATGAATGAGGGAGGGTaGCACTCTAGGAGGGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: RAHSTLSLHLKEGLWLGQMNEGG*HSRREP Trigger: AGGCTCCCTCCTAGAGTGCCACCCTCCCTCATTCAT...TTGTCCTAGCCACAGGCCCTCCTTGAGATGTAGAGAGAGGGTGGAGTGGGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| 3UTR-3UTR CCA 90 bp | GCCACGACATGGGCAGGTTCAGTGCTGGTGAAGGCCACTGAGGTGGGAATTCCAGGAATCTTCCAGCTGTaGATCCTGGCATCAGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: ATTWAGSVLVKATEVGIPGIFQL*ILASAP Trigger: TGGGGCTGATGCCAGGATCCACAGCTGGAAGATTCC...TGGAATTCCCACCTCAGTGGCCTTCACCAGCACTGAACCTGCCCATGTCGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
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| 3UTR-3UTR TCA 90 bp | TCACACAGTGATAACGTGGGGTGGGTGCCATTAAAATCCCATTCCTTTATACAGCCTGGCCCCGCTCCCTaGCACTGTGCAGCCAGGGCG | + |
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Preference number: 2 (lower is better) Translates to: SHSDNVGWVPLKSHSFIQPGPAP*HCAARA Trigger: CGCCCTGGCTGCACAGTGTCAGGGAGCGGGGCCAGG...CTGTATAAAGGAATGGGATTTTAATGGCACCCACCCCACGTTATCACTGTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| 3UTR-3UTR TCA 90 bp | CGGCTCCACATCCAGTGCAGCATTTTTCTTGGCCGTAACTGCCTTCTGCAGGTTGGCAGTAAGCAGTGCTaGCTGGCTGTGGTGGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: RLHIQCSIFLGRNCLLQVGSKQC*LAVVEG Trigger: GCCTTCCACCACAGCCAGTCAGCACTGCTTACTGCC...AACCTGCAGAAGGCAGTTACGGCCAAGAAAAATGCTGCACTGGATGTGGAGCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000184708.8 ENSMUST00000185011.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGGACACTGGGTGTCTGCATTCCTATCTAGAACACAAATGGCCCTGATCCTTCGCTCCCTGACACTGTaGAGCCAGGGCGAGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: QGHWVSAFLSRTQMALILRSLTL*SQGEAR Trigger: CCTGGCCTCGCCCTGGCTGCACAGTGTCAGGGAGCG...AAGGATCAGGGCCATTTGTGTTCTAGATAGGAATGCAGACACCCAGTGTCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGAGACAAAGGCAAGGCAGCTGGTTAGGACAGTGCCCCTCACTAGCTCCACAGGCAAGTGGATCATaGAGGTGGGGTGGGTATAGG | + |
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Preference number: 2 (lower is better) Translates to: LERQRQGSWLGQCPSLAPQASGS*RWGGYR Trigger: CCTATACCCACCCCACCTCCATGATCCACTTGCCTG...TGGAGCTAGTGAGGGGCACTGTCCTAACCAGCTGCCTTGCCTTTGTCTCTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
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| 3UTR CAA 90 bp | AGGGAGGGTGGCACTCTAGGAGGGAGCCTGGCATCTTCTTTCATCTaGGTCAAAATCAGATCCCAAAGGACACCCAGCCTGGGCTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: REGGTLGGSLASSFI*VKIRSQRTPSLGCV Trigger: GACACAGCCCAGGCTGGGTGTCCTTTGGGATCTGATTTTGACCAAGATGAAAGAAGATGCCAGGCTCCCTCCTAGAGTGCCACCCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| 3UTR-3UTR GCA 90 bp | GCCACGACATGGGCAGGTTCAGTGCTGGTGAAGGCCACTGAGGTGGGAATTCCATTTCTTGGCCGTAACTaGCTTCTGCAGGTTCCACAG | + |
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Preference number: 2 (lower is better) Translates to: ATTWAGSVLVKATEVGIPFLGRN*LLQVPQ Trigger: CTGTGGAACCTGCAGAAGGCAGTTACGGCCAAGAAA...TGGAATTCCCACCTCAGTGGCCTTCACCAGCACTGAACCTGCCCATGTCGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCCTGTGAGCTCGGAAAGCATGAATCGGCTCCACATCCAGTGCAGCATTTTTGTAAGCAGTGCTGACTaGCTGTGGTGGAAGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: APVSSESMNRLHIQCSIFVSSAD*LWWKAR Trigger: CCTGGCCTTCCACCACAGCCAGTCAGCACTGCTTAC...AAAAATGCTGCACTGGATGTGGAGCCGATTCATGCTTTCCGAGCTCACAGGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000184708.8 ENSMUST00000185011.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGCAAGGCAGCTGGTTAGGACAGTGCCCCTCACTAGCTCCAATTCCTCCCTCTATAGGGGTGTCTTCTaGGGCAAGGACACTGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: KARQLVRTVPLTSSNSSLYRGVF*GKDTGC Trigger: ACACCCAGTGTCCTTGCCCCAGAAGACACCCCTATA...GAGGGAGGAATTGGAGCTAGTGAGGGGCACTGTCCTAACCAGCTGCCTTGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
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| 3UTR-3UTR GCA 90 bp | ATAAAGAACGGTATCACCAGAACGAAAGGAGGCCACGACATGGGCAGGTTCAGTGGCAGCTTGGACCACTaGTGCTGGGATCCCAGATGC | + |
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Preference number: 2 (lower is better) Translates to: IKNGITRTKGGHDMGRFSGSLDH*CWDPRC Trigger: GCATCTGGGATCCCAGCAGCAGTGGTCCAAGCTGCC...ACTGAACCTGCCCATGTCGTGGCCTCCTTTCGTTCTGGTGATACCGTTCTTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
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| 3UTR-3UTR GCA 90 bp | TTCTTATGCTGCACACTGTCCAGTTCATCATCCTCATCGCTGTCTTCATCCTCGTGCAGGAAGGGTATCTaGTCCAGCACCGAGCCACCC | + |
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Preference number: 2 (lower is better) Translates to: FLCCTLSSSSSSSLSSSSCRKGI*SSTEPP Trigger: GGGTGGCTCGGTGCTGGAGCAGATACCCTTCCTGCA...CGAGGATGAAGACAGCGATGAGGATGATGAACTGGACAGTGTGCAGCATAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184280.8 |
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| 3UTR-3UTR TCA 90 bp | ACATGGGCAGGTTCAGTGCTGGTGAAGGCCACTGAGGTGGGAATTCCATGTTCTCATATGGGTCCATGTTaGGGTCAGGAATCTTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: TWAGSVLVKATEVGIPCSHMGPC*GQESSS Trigger: GCTGGAAGATTCCTGACCTCAACATGGACCCATATG...AGAACATGGAATTCCCACCTCAGTGGCCTTCACCAGCACTGAACCTGCCCATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
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| 3UTR-3UTR TCA 90 bp | GCCCCTGTGAGCTCGGAAAGCATGAATCGGCTCCACATCCAGTGCAGCATTTTTGGTTCCATGTCTTCTTaGAAGCGTATCACAGCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: APVSSESMNRLHIQCSIFGSMSS*KRITAE Trigger: CTCAGCTGTGATACGCTTTCAAGAAGACATGGAACC...AAAAATGCTGCACTGGATGTGGAGCCGATTCATGCTTTCCGAGCTCACAGGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
||
| 3UTR-3UTR TCA 90 bp | CTAGGAGGGAGCCTGGCATCTTCTTTCATCTTGGTCAAAATCAGATCCCAAAGGCAGGCTCCAGGAAGATaGAAGAGGCCAAGACTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LGGSLASSFILVKIRSQRQAPGR*KRPRLR Trigger: TCTGAGTCTTGGCCTCTTTCATCTTCCTGGAGCCTG...CCTTTGGGATCTGATTTTGACCAAGATGAAAGAAGATGCCAGGCTCCCTCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| 3UTR-3UTR TCA 90 bp | ATGCTGCACACTGTCCAGTTCATCATCCTCATCGCTGTCTTCATCCTCGCAGTTCAGCTGCATTCCTCTTaGTCTGTTCCTCGATCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: MLHTVQFIILIAVFILAVQLHSS*SVPRSV Trigger: AACAGATCGAGGAACAGATCAAGAGGAATGCAGCTG...AACTGCGAGGATGAAGACAGCGATGAGGATGATGAACTGGACAGTGTGCAGCAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184280.8 |
||
| 3UTR-3UTR CCA 90 bp | TCACACAGTGATAACGTGGGGTGGGTGCCATTAAAATCCCATTCCTTTATACAGCTGGCCCCAGAGGCTTaGTTAGTGTTGGGAAGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: SHSDNVGWVPLKSHSFIQLAPEA*LVLGSK Trigger: CTTGCTTCCCAACACTAACCAAGCCTCTGGGGCCAG...CTGTATAAAGGAATGGGATTTTAATGGCACCCACCCCACGTTATCACTGTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| 3UTR-3UTR CCA 90 bp | AGACTATCACACAGTGATAACGTGGGGTGGGTGCCATTAAAATCCCATTCCTTTCATCTTCTTTCATCTTaGTCAAAATCAGATCCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: RLSHSDNVGWVPLKSHSFHLLSS*SKSDPK Trigger: TTTGGGATCTGATTTTGACCAAGATGAAAGAAGATG...AAAGGAATGGGATTTTAATGGCACCCACCCCACGTTATCACTGTGTGATAGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| 3UTR CCA 72 bp | CGGACGGTGCCATCGGCAGAGCAGGATGCTAGGCGCTaGGAGGTGGGACTGAAGGCCAGACCCCACACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RTVPSAEQDARR*EVGLKARPHTA Trigger: TGCTGTGTGGGGTCTGGCCTTCAGTCCCACCTCCCAGCGCCTAGCATCCTGCTCTGCCGATGGCACCGTCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
||
| 3UTR CCA 72 bp | ACAAATGGCCCTGATCCTTACCTCAGCCCCACTGCCTaGCCCCGCTCCCTGACACTGTGCAGCCAGGGCGAG | + |
|
Preference number: 3 (lower is better) Translates to: TNGPDPYLSPTA*PRSLTLCSQGE Trigger: CTCGCCCTGGCTGCACAGTGTCAGGGAGCGGGGCCAGGCAGTGGGGCTGAGGTAAGGATCAGGGCCATTTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
||
| 3UTR GCA 72 bp | AGAGGCAGCTTGGACCACTGCTGCTGGGATCCCAGATaGGGACGGTGCCATCGGCAGAGCAGGATGCTAGGC | + |
|
Preference number: 3 (lower is better) Translates to: RGSLDHCCWDPR*GRCHRQSRMLG Trigger: GCCTAGCATCCTGCTCTGCCGATGGCACCGTCCGCATCTGGGATCCCAGCAGCAGTGGTCCAAGCTGCCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
||
| 3UTR GCA 72 bp | CCATGGGGAAGGTACAGAGGCAGCTTGGACCACTGCTaGTGGGATCCCAGATGCGGACGGTGCCATCGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PWGRYRGSLDHC*WDPRCGRCHRQ Trigger: CTGCCGATGGCACCGTCCGCATCTGGGATCCCAGCAGCAGTGGTCCAAGCTGCCTCTGTACCTTCCCCATGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
||
| 3UTR CCA 72 bp | TGGGGAAGGTACAGAGGCAGCTTGGACCACTGCTGCTaGGATCCCAGATGCGGACGGTGCCATCGGCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: WGRYRGSLDHCC*DPRCGRCHRQS Trigger: GCTCTGCCGATGGCACCGTCCGCATCTGGGATCCCAGCAGCAGTGGTCCAAGCTGCCTCTGTACCTTCCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGGAGGGCCTGTGGCTAGGACAATGCCCCAGAGGAGTGGAGGCCCTTCCCAGGCAGCTATGTCAGGAGTaGGGGTTGGGGCATGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: KEGLWLGQCPRGVEALPRQLCQE*GLGHEQ Trigger: CTGCTCATGCCCCAACCCCAACTCCTGACATAGCTG...CCTGGGAAGGGCCTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| 3UTR GCA 72 bp | CATCCATGGGGAAGGTACAGAGGCAGCTTGGACCACTaGTGCTGGGATCCCAGATGCGGACGGTGCCATCGG | + |
|
Preference number: 3 (lower is better) Translates to: HPWGRYRGSLDH*CWDPRCGRCHR Trigger: CCGATGGCACCGTCCGCATCTGGGATCCCAGCAGCAGTGGTCCAAGCTGCCTCTGTACCTTCCCCATGGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
||
| 3UTR GCA 72 bp | TCTCTACATCTCAAGGAGGGCCTGTGGCTAGGACAATaGCCCAGAGGAGTGGAGGCCCTTCCCAGGAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SLHLKEGLWLGQ*PRGVEALPRKA Trigger: GGCCTTCCTGGGAAGGGCCTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTTGAGATGTAGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| 3UTR GCA 72 bp | CTGTCTTCATCCTCGCAGTTCTGCAGGAAGGGTATCTaGTCCAGCACCGAGCCACCCAGGCGCTCCTTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LSSSSQFCRKGI*SSTEPPRRSLP Trigger: TGGCAAGGAGCGCCTGGGTGGCTCGGTGCTGGAGCAGATACCCTTCCTGCAGAACTGCGAGGATGAAGACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184280.8 |
||
| 3UTR CCA 72 bp | GGAGGCCCTTCCCAGGAAGGCCTGGCCCCAGAGGCTTaGTTAGTGTTGGGAAGCAAGAGGAATGGACTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GGPSQEGLAPEA*LVLGSKRNGLR Trigger: CCTCAGTCCATTCCTCTTGCTTCCCAACACTAACCAAGCCTCTGGGGCCAGGCCTTCCTGGGAAGGGCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTGCCCATGGTGACTGCCAGCACCGGGCCCCTGTGAGCTCGGAAAGCATGAATCTGAGGTCGTTGTCATaGGTGACGGTGAGATCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: AAHGDCQHRAPVSSESMNLRSLS*VTVRSA Trigger: GGCAGATCTCACCGTCACCAATGACAACGACCTCAG...ATTCATGCTTTCCGAGCTCACAGGGGCCCGGTGCTGGCAGTCACCATGGGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184708.8 ENSMUST00000185011.8 |
||
| 3UTR GCA 72 bp | ACTGTAACAGTACTCGCTGTTGCTGCCCATGGTGACTaGCAGCACCGGGCCCCTGTGAGCTCGGAAAGCATG | + |
|
Preference number: 3 (lower is better) Translates to: TVTVLAVAAHGD*QHRAPVSSESM Trigger: CATGCTTTCCGAGCTCACAGGGGCCCGGTGCTGGCAGTCACCATGGGCAGCAACAGCGAGTACTGTTACAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000184708.8 ENSMUST00000185011.8 |
||
| 3UTR CCA 72 bp | CACTCCACCCTCTCTCTACATCTCAAGGAGGGCCTGTaGCTAGGACAATGCCCCAGAGGAGTGGAGGCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: HSTLSLHLKEGL*LGQCPRGVEAL Trigger: AAGGGCCTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTTGAGATGTAGAGAGAGGGTGGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| 3UTR TCA 72 bp | GGGTGTCTGCATTCCTATCTAGAACACAAATGGCCCTaGTCCTTACCTCAGCCCCACTGCCTGGCCCCGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GCLHSYLEHKWP*SLPQPHCLAPL Trigger: GAGCGGGGCCAGGCAGTGGGGCTGAGGTAAGGATCAGGGCCATTTGTGTTCTAGATAGGAATGCAGACACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTTCATCCTCGCAGTTCTGCAGGAAGGGTATCTGCTCCAGCACCGAGCCACCGCTCCTTGCCATCTTaGCCAGCTGCATTCCTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: CLHPRSSAGRVSAPAPSHRSLPS*PAAFLL Trigger: CAAGAGGAATGCAGCTGGCAAAGATGGCAAGGAGCG...GTGGCTCGGTGCTGGAGCAGATACCCTTCCTGCAGAACTGCGAGGATGAAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184280.8 |
||
| 3UTR GCA 72 bp | TCATCATCCTCATCGCTGTCTTCATCCTCGCAGTTCTaGAGGAAGGGTATCTGCTCCAGCACCGAGCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: SSSSSLSSSSQF*RKGICSSTEPP Trigger: GGGTGGCTCGGTGCTGGAGCAGATACCCTTCCTGCAGAACTGCGAGGATGAAGACAGCGATGAGGATGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184280.8 |
||
| 3UTR CCA 72 bp | AGAACGGTATCACCAGAACGAAAGGAGGCCACGACATaGGCAGGTTCAGTGCTGGTGAAGGCCACTGAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: RTVSPERKEATT*AGSVLVKATEV Trigger: CACCTCAGTGGCCTTCACCAGCACTGAACCTGCCCATGTCGTGGCCTCCTTTCGTTCTGGTGATACCGTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGGAATTCCATGTTCTCCATCCATGGGGAAGGTACAGAGGCAGCTTGGACCCTGAGGTCGTTGTCATaGGTGACGGTGAGATCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: GGNSMFSIHGEGTEAAWTLRSLS*VTVRSA Trigger: GGCAGATCTCACCGTCACCAATGACAACGACCTCAG...GGTCCAAGCTGCCTCTGTACCTTCCCCATGGATGGAGAACATGGAATTCCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
||
| 3UTR TCA 72 bp | CACGACATGGGCAGGTTCAGTGCTGGTGAAGGCCACTaGGGTGGGAATTCCATGTTCTCCATCCATGGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: HDMGRFSAGEGH*GGNSMFSIHGE Trigger: TTCCCCATGGATGGAGAACATGGAATTCCCACCTCAGTGGCCTTCACCAGCACTGAACCTGCCCATGTCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
||
| 3UTR TCA 72 bp | GAAAGGAGGCCACGACATGGGCAGGTTCAGTGCTGGTaGAGGCCACTGAGGTGGGAATTCCATGTTCTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: ERRPRHGQVQCW*RPLRWEFHVLH Trigger: ATGGAGAACATGGAATTCCCACCTCAGTGGCCTTCACCAGCACTGAACCTGCCCATGTCGTGGCCTCCTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
||
| 3UTR TCA 72 bp | TATCCCACAGGACTGTGGGCTTTGGCACAACCCAACTaGCAGGCAAGTGGATCATGGAGGTGGGGTGGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: YPTGLWALAQPN*QASGSWRWGGY Trigger: ATACCCACCCCACCTCCATGATCCACTTGCCTGTCAGTTGGGTTGTGCCAAAGCCCACAGTCCTGTGGGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
||
| 3UTR CCA 72 bp | CTGTGTCAAACTCAGGACGACAGCTATGTCAGGAGTTaGGGTTGGGGCATGAGCAGAAACCCCAGAGGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LCQTQDDSYVRS*GWGMSRNPRGH Trigger: ATGGCCTCTGGGGTTTCTGCTCATGCCCCAACCCCAACTCCTGACATAGCTGTCGTCCTGAGTTTGACACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| 3UTR CCA 72 bp | GGATCATGGAGGTGGGGTGGGTATAGGGGTGTCTTCTaGGGCAAGGACACTGGGTGTCTGCATTCCTATCTA | + |
|
Preference number: 3 (lower is better) Translates to: GSWRWGGYRGVF*GKDTGCLHSYL Trigger: TAGATAGGAATGCAGACACCCAGTGTCCTTGCCCCAGAAGACACCCCTATACCCACCCCACCTCCATGATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGGAATTCCATGTTCTCCATCCATGGGGAAGGTACAGAGGCAGCTTGGACCGAGCGGAGGGTAAACTaGGGGTTCCATGTCTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GGNSMFSIHGEGTEAAWTERRVN*GFHVFL Trigger: CAAGAAGACATGGAACCCCAAGTTTACCCTCCGCTC...GGTCCAAGCTGCCTCTGTACCTTCCCCATGGATGGAGAACATGGAATTCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
||
| 3UTR CCA 72 bp | CTCTGCACAGCCCTTCATCTGATGAATGAGGGAGGGTaGCACTCTAGGAGGGAGCCTGGCATCTTCTTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LCTALHLMNEGG*HSRREPGIFFH Trigger: ATGAAAGAAGATGCCAGGCTCCCTCCTAGAGTGCCACCCTCCCTCATTCATCAGATGAAGGGCTGTGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| 3UTR CCA 72 bp | CGGGAAGCCTCATTTATCCCACAGGACTGTGGGCTTTaGCACAACCCAACTGACAGGCAAGTGGATCATGGA | + |
|
Preference number: 3 (lower is better) Translates to: REASFIPQDCGL*HNPTDRQVDHG Trigger: TCCATGATCCACTTGCCTGTCAGTTGGGTTGTGCCAAAGCCCACAGTCCTGTGGGATAAATGAGGCTTCCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
||
| 3UTR-3UTR CAA 90 bp | ACATGGGCAGGTTCAGTGCTGGTGAAGGCCACTGAGGTGGGAATTCCATGTTCTTCACAGCTGAGGTCGTaGTCATTGGTGACGGTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: TWAGSVLVKATEVGIPCSSQLRS*SLVTVR Trigger: TCTCACCGTCACCAATGACAACGACCTCAGCTGTGA...AGAACATGGAATTCCCACCTCAGTGGCCTTCACCAGCACTGAACCTGCCCATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
||
| 3UTR GCA 72 bp | GTGAGCTCGGAAAGCATGAATCGGCTCCACATCCAGTaGAGCATTTTTCTTGGCCGTAACTGCCTTCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VSSESMNRLHIQ*SIFLGRNCLLQ Trigger: CTGCAGAAGGCAGTTACGGCCAAGAAAAATGCTGCACTGGATGTGGAGCCGATTCATGCTTTCCGAGCTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000184708.8 ENSMUST00000185011.8 |
||
| 3UTR TCA 72 bp | GCACACTTGGGTCATAGCCATCATATGGGTCCATGTTaGGGTCAGGAATCTTCCAGCTGTGGATCCTGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: AHLGHSHHMGPC*GQESSSCGSWH Trigger: ATGCCAGGATCCACAGCTGGAAGATTCCTGACCTCAACATGGACCCATATGATGGCTATGACCCAAGTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
||
| 3UTR GCA 72 bp | TCCAGTGCAGCATTTTTCTTGGCCGTAACTGCCTTCTaGAGGTTCCACAGTTTGAGTGTGCCATCCTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SSAAFFLAVTAF*RFHSLSVPSSE Trigger: CTCTGAGGATGGCACACTCAAACTGTGGAACCTGCAGAAGGCAGTTACGGCCAAGAAAAATGCTGCACTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000184708.8 ENSMUST00000185011.8 |
||
| 3UTR GCA 72 bp | CTCCACATCCAGTGCAGCATTTTTCTTGGCCGTAACTaGCTTCTGCAGGTTCCACAGTTTGAGTGTGCCATC | + |
|
Preference number: 3 (lower is better) Translates to: LHIQCSIFLGRN*LLQVPQFECAI Trigger: GATGGCACACTCAAACTGTGGAACCTGCAGAAGGCAGTTACGGCCAAGAAAAATGCTGCACTGGATGTGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000184708.8 ENSMUST00000185011.8 |
||
| 3UTR CCA 72 bp | GACATGGCTCAGCACACTTGGGTCATAGCCATCATATaGGTCCATGTTGAGGTCAGGAATCTTCCAGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: DMAQHTWVIAII*VHVEVRNLPAV Trigger: CACAGCTGGAAGATTCCTGACCTCAACATGGACCCATATGATGGCTATGACCCAAGTGTGCTGAGCCATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGGCCTGGCCCCAGAGGCTTGGTTAGTGTTGGGAAGCAAGAGGAATGGACTGGCATCTTCTTTCATCTaGGTCAAAATCAGATCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: EGLAPEAWLVLGSKRNGLASSFI*VKIRSQ Trigger: TTGGGATCTGATTTTGACCAAGATGAAAGAAGATGC...CAGTCCATTCCTCTTGCTTCCCAACACTAACCAAGCCTCTGGGGCCAGGCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| 3UTR-3UTR CAA 90 bp | TCACACAGTGATAACGTGGGGTGGGTGCCATTAAAATCCCATTCCTTTATACAGCCTGGCCCCAGAGGCTaGGTTAGTGTTGGGAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: SHSDNVGWVPLKSHSFIQPGPRG*VSVGKQ Trigger: TTGCTTCCCAACACTAACCAAGCCTCTGGGGCCAGG...CTGTATAAAGGAATGGGATTTTAATGGCACCCACCCCACGTTATCACTGTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| 3UTR CCA 72 bp | GAGACTGACAGACTATCACACAGTGATAACGTGGGGTaGGTGCCATTAAAATCCCATTCCTTTATACAGATA | + |
|
Preference number: 3 (lower is better) Translates to: ETDRLSHSDNVG*VPLKSHSFIQI Trigger: TATCTGTATAAAGGAATGGGATTTTAATGGCACCCACCCCACGTTATCACTGTGTGATAGTCTGTCAGTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | CTCAGCCCCACTGCCTGGCCCCGCTCCCTGACACTGTGCAGCCAGGGCGAGGCCTGGAGGAAAGCCACCTaGGCCTGCAGCTCGGCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LSPTAWPRSLTLCSQGEAWRKAT*ACSSAR Trigger: GCGCGCCGAGCTGCAGGCTCAGGTGGCTTTCCTCCA...GGCCTCGCCCTGGCTGCACAGTGTCAGGGAGCGGGGCCAGGCAGTGGGGCTGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR GCA 90 bp | CTCAGCCCCACTGCCTGGCCCCGCTCCCTGACACTGTGCAGCCAGGGCGAGGCCTGCTGGGATCCCAGATaGGGACGGTGCCATCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSPTAWPRSLTLCSQGEACWDPR*GRCHRQ Trigger: CTGCCGATGGCACCGTCCGCATCTGGGATCCCAGCA...GGCCTCGCCCTGGCTGCACAGTGTCAGGGAGCGGGGCCAGGCAGTGGGGCTGAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184694.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGCCCCACTGCCTGGCCCCGCTCCCTGACACTGTGCAGCCAGGGCGAGGCCGGCAGTAAGCAGTGCTaGCTGGCTGTGGTGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSPTAWPRSLTLCSQGEAGSKQC*LAVVEG Trigger: GCCTTCCACCACAGCCAGTCAGCACTGCTTACTGCC...GGCCTCGCCCTGGCTGCACAGTGTCAGGGAGCGGGGCCAGGCAGTGGGGCTGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CCA 90 bp | AAGGAGGGCCTGTGGCTAGGACAATGCCCCAGAGGAGTGGAGGCCCTTCCCAGGGGCCTGGTGAAGCCCTaGGGGCCCCCTCAACGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KEGLWLGQCPRGVEALPRGLVKP*GPPQRA Trigger: AGCCCGTTGAGGGGGCCCCCAGGGCTTCACCAGGCC...CCTGGGAAGGGCCTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CCA 90 bp | CTCAGCCCCACTGCCTGGCCCCGCTCCCTGACACTGTGCAGCCAGGGCGAGGCCGTAAGCAGTGCTGACTaGCTGTGGTGGAAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSPTAWPRSLTLCSQGEAVSSAD*LWWKAR Trigger: CCTGGCCTTCCACCACAGCCAGTCAGCACTGCTTAC...GGCCTCGCCCTGGCTGCACAGTGTCAGGGAGCGGGGCCAGGCAGTGGGGCTGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CCA 90 bp | CTCAGCCCCACTGCCTGGCCCCGCTCCCTGACACTGTGCAGCCAGGGCGAGGCCAGTGCCTTGCTGGGATaGCAGGCCACTGCATGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LSPTAWPRSLTLCSQGEASALLG*QATAWM Trigger: CATCCATGCAGTGGCCTGCCATCCCAGCAAGGCACT...GGCCTCGCCCTGGCTGCACAGTGTCAGGGAGCGGGGCCAGGCAGTGGGGCTGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184694.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGCCCCACTGCCTGGCCCCGCTCCCTGACACTGTGCAGCCAGGGCGAGGCCGAATTCCCTGGAGTTTaGCCCGACGGCTTTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSPTAWPRSLTLCSQGEAEFPGV*PDGFPA Trigger: AGCTGGAAAGCCGTCGGGTCAAACTCCAGGGAATTC...GGCCTCGCCCTGGCTGCACAGTGTCAGGGAGCGGGGCCAGGCAGTGGGGCTGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | CTCAGCCCCACTGCCTGGCCCCGCTCCCTGACACTGTGCAGCCAGGGCGAGGCCGCTGGTGAAGGCCACTaGGGTGGGAATTCCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSPTAWPRSLTLCSQGEAAGEGH*GGNSMF Trigger: GAACATGGAATTCCCACCTCAGTGGCCTTCACCAGC...GGCCTCGCCCTGGCTGCACAGTGTCAGGGAGCGGGGCCAGGCAGTGGGGCTGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184694.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGCCCCACTGCCTGGCCCCGCTCCCTGACACTGTGCAGCCAGGGCGAGGCCCGGCTTTCCAGCTCATaGGGGTTCCCCTCTGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSPTAWPRSLTLCSQGEARLSSS*GFPSEV Trigger: TACTTCAGAGGGGAACCCCCATGAGCTGGAAAGCCG...GGCCTCGCCCTGGCTGCACAGTGTCAGGGAGCGGGGCCAGGCAGTGGGGCTGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | ATCTGCTCCAGCACCGAGCCACCCAGGCGCTCCTTGCCATCTTTGCCAGCTGCATGGAGGAAAGCCACCTaGGCCTGCAGCTCGGCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: ICSSTEPPRRSLPSLPAAWRKAT*ACSSAR Trigger: GCGCGCCGAGCTGCAGGCTCAGGTGGCTTTCCTCCA...TGCAGCTGGCAAAGATGGCAAGGAGCGCCTGGGTGGCTCGGTGCTGGAGCAGAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184280.8 |
||
| CDS-3UTR CCA 90 bp | CCTTACCTCAGCCCCACTGCCTGGCCCCGCTCCCTGACACTGTGCAGCCAGGGCAGTGCCTTGCTGGGATaGCAGGCCACTGCATGGATG | + |
|
Preference number: 4 (lower is better) Translates to: PYLSPTAWPRSLTLCSQGSALLG*QATAWM Trigger: CATCCATGCAGTGGCCTGCCATCCCAGCAAGGCACT...GCCCTGGCTGCACAGTGTCAGGGAGCGGGGCCAGGCAGTGGGGCTGAGGTAAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
||
| CDS-3UTR TCA 90 bp | ACATCTCAAGGAGGGCCTGTGGCTAGGACAATGCCCCAGAGGAGTGGAGGCCCTTGTTGCTGCCCATGGTaGCTGCCAGCACCGGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TSQGGPVARTMPQRSGGPCCCPW*LPAPGP Trigger: GGGGCCCGGTGCTGGCAGTCACCATGGGCAGCAACA...AGGGCCTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTTGAGATGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | CTCAGCCCCACTGCCTGGCCCCGCTCCCTGACACTGTGCAGCCAGGGCGAGGCCACAGTCGTGGCTTCCTaGCATCAAGAACACGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LSPTAWPRSLTLCSQGEATVVAS*HQEHAI Trigger: AATGGCGTGTTCTTGATGTCAGGAAGCCACGACTGT...GGCCTCGCCCTGGCTGCACAGTGTCAGGGAGCGGGGCCAGGCAGTGGGGCTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184694.2 |
||
| CDS-3UTR GCA 90 bp | CTCAGCCCCACTGCCTGGCCCCGCTCCCTGACACTGTGCAGCCAGGGCGAGGCCTTTCTTGGCCGTAACTaGCTTCTGCAGGTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LSPTAWPRSLTLCSQGEAFLGRN*LLQVPQ Trigger: CTGTGGAACCTGCAGAAGGCAGTTACGGCCAAGAAA...GGCCTCGCCCTGGCTGCACAGTGTCAGGGAGCGGGGCCAGGCAGTGGGGCTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR GCA 90 bp | CCTGATCCTTACCTCAGCCCCACTGCCTGGCCCCGCTCCCTGACACTGTGCAGCCACCTGGTTGATCTGTaGTGGGCCACTGCTCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PDPYLSPTAWPRSLTLCSHLVDL*WATAPS Trigger: CGAGGGAGCAGTGGCCCAGCACAGATCAACCAGGTG...GCTGCACAGTGTCAGGGAGCGGGGCCAGGCAGTGGGGCTGAGGTAAGGATCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCCCACTCCACCCTCTCTCTACATCTCAAGGAGGGCCTGTGGCTAGGACAAGGCCTGGTGAAGCCCTaGGGGCCCCCTCAACGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RAHSTLSLHLKEGLWLGQGLVKP*GPPQRA Trigger: AGCCCGTTGAGGGGGCCCCCAGGGCTTCACCAGGCC...TTGTCCTAGCCACAGGCCCTCCTTGAGATGTAGAGAGAGGGTGGAGTGGGCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CCA 90 bp | GGGGCACAGGGCCCACTCCACCCTCTCTCTACATCTCAAGGAGGGCCTGTGGCTAGTGCTGACTGGCTGTaGTGGAAGGCCAGGGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GAQGPLHPLSTSQGGPVASADWL*WKARER Trigger: CCGCTCCCTGGCCTTCCACCACAGCCAGTCAGCACT...AGCCACAGGCCCTCCTTGAGATGTAGAGAGAGGGTGGAGTGGGCCCTGTGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | GGGGTGACTCCTGGGGAAAGGGCCTTTAGCACCACCAGGCTCCAGGAAGATGAATGGAGGAAAGCCACCTaGGCCTGCAGCTCGGCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GVTPGERAFSTTRLQEDEWRKAT*ACSSAR Trigger: GCGCGCCGAGCTGCAGGCTCAGGTGGCTTTCCTCCA...TTCATCTTCCTGGAGCCTGGTGGTGCTAAAGGCCCTTTCCCCAGGAGTCACCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | GGGGTGACTCCTGGGGAAAGGGCCTTTAGCACCACCAGGCTCCAGGAAGATGAATGTTGCTGCCCATGGTaGCTGCCAGCACCGGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GVTPGERAFSTTRLQEDECCCPW*LPAPGP Trigger: GGGGCCCGGTGCTGGCAGTCACCATGGGCAGCAACA...TTCATCTTCCTGGAGCCTGGTGGTGCTAAAGGCCCTTTCCCCAGGAGTCACCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | GGGGCACAGGGCCCACTCCACCCTCTCTCTACATCTCAAGGAGGGCCTGTGGCTATGAAGACGTCTTCATaGGGCCGGGGCTGGGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GAQGPLHPLSTSQGGPVAMKTSS*GRGWGV Trigger: CACACCCCAGCCCCGGCCTCATGAAGACGTCTTCAT...AGCCACAGGCCCTCCTTGAGATGTAGAGAGAGGGTGGAGTGGGCCCTGTGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108495.9 |
||
| CDS-3UTR GCA 90 bp | GCTGTTGCTGCCCATGGTGACTGCCAGCACCGGGCCCCTGTGAGCTCGGAAAGCCACCCAGGCGCTCCTTaGCATCTTTGCCAGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AVAAHGDCQHRAPVSSESHPGAP*HLCQLH Trigger: ATGCAGCTGGCAAAGATGGCAAGGAGCGCCTGGGTG...GCTTTCCGAGCTCACAGGGGCCCGGTGCTGGCAGTCACCATGGGCAGCAACAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184708.8 |
||
| CDS-3UTR GCA 90 bp | GGGGCACAGGGCCCACTCCACCCTCTCTCTACATCTCAAGGAGGGCCTGTGGCTTGCAGGAAGGGTATCTaGTCCAGCACCGAGCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: GAQGPLHPLSTSQGGPVACRKGI*SSTEPP Trigger: GGGTGGCTCGGTGCTGGAGCAGATACCCTTCCTGCA...AGCCACAGGCCCTCCTTGAGATGTAGAGAGAGGGTGGAGTGGGCCCTGTGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR GCA 90 bp | AAGGAGGGCCTGTGGCTAGGACAATGCCCCAGAGGAGTGGAGGCCCTTCCCAGGGGTGACGGTGAGATCTaGCAAGTCCCCCAGGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KEGLWLGQCPRGVEALPRGDGEI*QVPQAH Trigger: GTGAGCCTGGGGGACTTGGCAGATCTCACCGTCACC...CCTGGGAAGGGCCTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR GCA 90 bp | GGGGCACAGGGCCCACTCCACCCTCTCTCTACATCTCAAGGAGGGCCTGTGGCTGGTGACGGTGAGATCTaGCAAGTCCCCCAGGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GAQGPLHPLSTSQGGPVAGDGEI*QVPQAH Trigger: GTGAGCCTGGGGGACTTGGCAGATCTCACCGTCACC...AGCCACAGGCCCTCCTTGAGATGTAGAGAGAGGGTGGAGTGGGCCCTGTGCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR GCA 90 bp | GGGGCACAGGGCCCACTCCACCCTCTCTCTACATCTCAAGGAGGGCCTGTGGCTGCCCCTGTCGTCGTGTaGAGTGATGGTGAGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GAQGPLHPLSTSQGGPVAAPVVV*SDGERL Trigger: CAGCCTCTCACCATCACTGCACACGACGACAGGGGC...AGCCACAGGCCCTCCTTGAGATGTAGAGAGAGGGTGGAGTGGGCCCTGTGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | AAGGAGGGCCTGTGGCTAGGACAATGCCCCAGAGGAGTGGAGGCCCTTCCCAGGGGCTGTTCTCCAGTGTaGCCGACTCTACAGGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KEGLWLGQCPRGVEALPRGCSPV*PTLQGH Trigger: ATGGCCCTGTAGAGTCGGTCACACTGGAGAACAGCC...CCTGGGAAGGGCCTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | AGGGCCCACTCCACCCTCTCTCTACATCTCAAGGAGGGCCTGTGGCTAGGACAAGCTGGGAGGTGGGACTaGAGGCCAGACCCCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: RAHSTLSLHLKEGLWLGQAGRWD*RPDPTQ Trigger: CTGTGTGGGGTCTGGCCTTCAGTCCCACCTCCCAGC...TTGTCCTAGCCACAGGCCCTCCTTGAGATGTAGAGAGAGGGTGGAGTGGGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | GGGGTGACTCCTGGGGAAAGGGCCTTTAGCACCACCAGGCTCCAGGAAGATGAAGCTGGGAGGTGGGACTaGAGGCCAGACCCCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: GVTPGERAFSTTRLQEDEAGRWD*RPDPTQ Trigger: CTGTGTGGGGTCTGGCCTTCAGTCCCACCTCCCAGC...TTCATCTTCCTGGAGCCTGGTGGTGCTAAAGGCCCTTTCCCCAGGAGTCACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | CACCGGGCCCCTGTGAGCTCGGAAAGCATGAATCGGCTCCACATCCAGTGCAGCAGAATCACAGCTTCATaGGGCCGGGGCTGGGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HRAPVSSESMNRLHIQCSRITAS*GRGWGV Trigger: CACACCCCAGCCCCGGCCTCATGAAGCTGTGATTCT...GCTGCACTGGATGTGGAGCCGATTCATGCTTTCCGAGCTCACAGGGGCCCGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000184708.8 ENSMUST00000185011.8 |
||
| CDS-3UTR GCA 90 bp | AACACAAATGGCCCTGATCCTTACCTCAGCCCCACTGCCTGGCCCCGCTCCCTGTGTCCAGGAACCGGATaGCCCTGTCGTCGTGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NTNGPDPYLSPTAWPRSLCPGTG*PCRRVQ Trigger: CTGCACACGACGACAGGGGCATCCGGTTCCTGGACA...CAGGGAGCGGGGCCAGGCAGTGGGGCTGAGGTAAGGATCAGGGCCATTTGTGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
||
| CDS-3UTR CCA 90 bp | AAGGAGGGCCTGTGGCTAGGACAATGCCCCAGAGGAGTGGAGGCCCTTCCCAGGGTAAGCAGTGCTGACTaGCTGTGGTGGAAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KEGLWLGQCPRGVEALPRVSSAD*LWWKAR Trigger: CCTGGCCTTCCACCACAGCCAGTCAGCACTGCTTAC...CCTGGGAAGGGCCTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CCA 90 bp | CAAGGAGGGCCTGTGGCTAGGACAATGCCCCAGAGGAGTGGAGGCCCTTCCCAGTCCAGCTGTGGATCCTaGCATCAGCCCCACCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: QGGPVARTMPQRSGGPSQSSCGS*HQPHHC Trigger: ACAGTGGTGGGGCTGATGCCAGGATCCACAGCTGGA...CTGGGAAGGGCCTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | CTCAGCCCCACTGCCTGGCCCCGCTCCCTGACACTGTGCAGCCAGGGCGAGGCCATTGGAGACTTGTTCTaGCAGATCTGTCTTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSPTAWPRSLTLCSQGEAIGDLF*QICLLL Trigger: GAGAAGAAGACAGATCTGTCAGAACAAGTCTCCAAT...GGCCTCGCCCTGGCTGCACAGTGTCAGGGAGCGGGGCCAGGCAGTGGGGCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | CATGGTGACTGCCAGCACCGGGCCCCTGTGAGCTCGGAAAGCATGAATCGGCTCGGCTGTTCTCCAGTGTaGCCGACTCTACAGGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HGDCQHRAPVSSESMNRLGCSPV*PTLQGH Trigger: ATGGCCCTGTAGAGTCGGTCACACTGGAGAACAGCC...GAGCCGATTCATGCTTTCCGAGCTCACAGGGGCCCGGTGCTGGCAGTCACCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184708.8 |
||
| CDS-3UTR TCA 90 bp | AAGGAGGGCCTGTGGCTAGGACAATGCCCCAGAGGAGTGGAGGCCCTTCCCAGGGCTGGTGAAGGCCACTaGGGTGGGAATTCCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KEGLWLGQCPRGVEALPRAGEGH*GGNSMF Trigger: GAACATGGAATTCCCACCTCAGTGGCCTTCACCAGC...CCTGGGAAGGGCCTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | AACACAAATGGCCCTGATCCTTACCTCAGCCCCACTGCCTGGCCCCGCTCCCTGCAGGTTCAGTGCTGGTaGAGGCCACTGAGGTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NTNGPDPYLSPTAWPRSLQVQCW*RPLRWE Trigger: TTCCCACCTCAGTGGCCTTCACCAGCACTGAACCTG...CAGGGAGCGGGGCCAGGCAGTGGGGCTGAGGTAAGGATCAGGGCCATTTGTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
||
| CDS-3UTR TCA 90 bp | TCTCAAGGAGGGCCTGTGGCTAGGACAATGCCCCAGAGGAGTGGAGGCCCTTCCTCTTGCGGTGGGCCGTaGTCTCCTGCACACATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQGGPVARTMPQRSGGPSSCGGP*SPAHMS Trigger: AGACATGTGTGCAGGAGATCACGGCCCACCGCAAGA...GGAAGGGCCTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTTGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR GCA 90 bp | GATGAAAGAGGCCAAGACTCAGAGCCTCTGAAGGTGAGGCTGGGGGCTGCCTCATGCTGGGATCCCAGATaGGGACGGTGCCATCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DERGQDSEPLKVRLGAASCWDPR*GRCHRQ Trigger: CTGCCGATGGCACCGTCCGCATCTGGGATCCCAGCA...TGAGGCAGCCCCCAGCCTCACCTTCAGAGGCTCTGAGTCTTGGCCTCTTTCATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CCA 90 bp | ATCTGCTCCAGCACCGAGCCACCCAGGCGCTCCTTGCCATCTTTGCCAGCTGCAGGGAACGCACACGCTTaGACCGCATGTCCAAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: ICSSTEPPRRSLPSLPAAGNAHA*TACPRW Trigger: CCATCTTGGACATGCGGTCCAAGCGTGTGCGTTCCC...TGCAGCTGGCAAAGATGGCAAGGAGCGCCTGGGTGGCTCGGTGCTGGAGCAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184280.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGAGGGCCTGTGGCTAGGACAATGCCCCAGAGGAGTGGAGGCCCTTCCCAGCGGCTTTCCAGCTCATaGGGGTTCCCCTCTGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QGGPVARTMPQRSGGPSQRLSSS*GFPSEV Trigger: TACTTCAGAGGGGAACCCCCATGAGCTGGAAAGCCG...CTGGGAAGGGCCTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CCA 90 bp | CTCCTGGGGAAAGGGCCTTTAGCACCACCAGGCTCCAGGAAGATGAAAGAGGCCGGGTGTGCCAGGAGGTaGGACAGTCACTTTCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLGKGPLAPPGSRKMKEAGCARR*DSHFRG Trigger: CCCCCGAAAGTGACTGTCCCACCTCCTGGCACACCC...GGCCTCTTTCATCTTCCTGGAGCCTGGTGGTGCTAAAGGCCCTTTCCCCAGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CCA 90 bp | GATGAAAGAGGCCAAGACTCAGAGCCTCTGAAGGTGAGGCTGGGGGCTGCCTCAGCTGACTGGCTGTGGTaGAAGGCCAGGGAGCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: DERGQDSEPLKVRLGAASADWLW*KARERM Trigger: CATCCGCTCCCTGGCCTTCCACCACAGCCAGTCAGC...TGAGGCAGCCCCCAGCCTCACCTTCAGAGGCTCTGAGTCTTGGCCTCTTTCATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CCA 90 bp | GATGAAAGAGGCCAAGACTCAGAGCCTCTGAAGGTGAGGCTGGGGGCTGCCTCAAGTGCTGACTGGCTGTaGTGGAAGGCCAGGGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: DERGQDSEPLKVRLGAASSADWL*WKARER Trigger: CCGCTCCCTGGCCTTCCACCACAGCCAGTCAGCACT...TGAGGCAGCCCCCAGCCTCACCTTCAGAGGCTCTGAGTCTTGGCCTCTTTCATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CCA 90 bp | CAAGGAGGGCCTGTGGCTAGGACAATGCCCCAGAGGAGTGGAGGCCCTTCCCAGTCATGCTTCTTGCGGTaGGCCGTGATCTCCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: QGGPVARTMPQRSGGPSQSCFLR*AVISCT Trigger: TGTGCAGGAGATCACGGCCCACCGCAAGAAGCATGA...CTGGGAAGGGCCTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | CTCCTGGGGAAAGGGCCTTTAGCACCACCAGGCTCCAGGAAGATGAAAGAGGCCCATACTCCAGCATCTTaGTCCGCCGCACCAGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LLGKGPLAPPGSRKMKEAHTPAS*SAAPGP Trigger: CGGACCTGGTGCGGCGGATCAAGATGCTGGAGTATG...GGCCTCTTTCATCTTCCTGGAGCCTGGTGGTGCTAAAGGCCCTTTCCCCAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | AGGGCCCACTCCACCCTCTCTCTACATCTCAAGGAGGGCCTGTGGCTAGGACAAGGCAGTAAGCAGTGCTaGCTGGCTGTGGTGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RAHSTLSLHLKEGLWLGQGSKQC*LAVVEG Trigger: GCCTTCCACCACAGCCAGTCAGCACTGCTTACTGCC...TTGTCCTAGCCACAGGCCCTCCTTGAGATGTAGAGAGAGGGTGGAGTGGGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR GCA 90 bp | ACATCTCAAGGAGGGCCTGTGGCTAGGACAATGCCCCAGAGGAGTGGAGGCCCTCACCCAGGCGCTCCTTaGCATCTTTGCCAGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TSQGGPVARTMPQRSGGPHPGAP*HLCQLH Trigger: ATGCAGCTGGCAAAGATGGCAAGGAGCGCCTGGGTG...AGGGCCTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTTGAGATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR GCA 90 bp | CTCCTGGGGAAAGGGCCTTTAGCACCACCAGGCTCCAGGAAGATGAAAGAGGCCCACCTGGTTGATCTGTaGTGGGCCACTGCTCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LLGKGPLAPPGSRKMKEAHLVDL*WATAPS Trigger: CGAGGGAGCAGTGGCCCAGCACAGATCAACCAGGTG...GGCCTCTTTCATCTTCCTGGAGCCTGGTGGTGCTAAAGGCCCTTTCCCCAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR GCA 90 bp | CTCCTGGGGAAAGGGCCTTTAGCACCACCAGGCTCCAGGAAGATGAAAGAGGCCTGTCCAGGAACCGGATaGCCCTGTCGTCGTGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLGKGPLAPPGSRKMKEACPGTG*PCRRVQ Trigger: CTGCACACGACGACAGGGGCATCCGGTTCCTGGACA...GGCCTCTTTCATCTTCCTGGAGCCTGGTGGTGCTAAAGGCCCTTTCCCCAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR GCA 90 bp | GATGAAAGAGGCCAAGACTCAGAGCCTCTGAAGGTGAGGCTGGGGGCTGCCTCATGGATGGCCTCCTCATaGTTCTTGCGGTGGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: DERGQDSEPLKVRLGAASWMASS*FLRWAV Trigger: CACGGCCCACCGCAAGAAGCATGAGGAGGCCATCCA...TGAGGCAGCCCCCAGCCTCACCTTCAGAGGCTCTGAGTCTTGGCCTCTTTCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CCA 90 bp | AGCTCGGAAAGCATGAATCGGCTCCACATCCAGTGCAGCATTTTTCTTGGCCGTGGCCTGGTGAAGCCCTaGGGGCCCCCTCAACGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSESMNRLHIQCSIFLGRGLVKP*GPPQRA Trigger: AGCCCGTTGAGGGGGCCCCCAGGGCTTCACCAGGCC...ACGGCCAAGAAAAATGCTGCACTGGATGTGGAGCCGATTCATGCTTTCCGAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000184708.8 |
||
| CDS-3UTR CCA 90 bp | GCTGCCCATGGTGACTGCCAGCACCGGGCCCCTGTGAGCTCGGAAAGCATGAATCGGCTTTCCAGCTCATaGGGGTTCCCCTCTGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: AAHGDCQHRAPVSSESMNRLSSS*GFPSEV Trigger: TACTTCAGAGGGGAACCCCCATGAGCTGGAAAGCCG...ATTCATGCTTTCCGAGCTCACAGGGGCCCGGTGCTGGCAGTCACCATGGGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000184708.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGCCTGGCCCCAGAGGCTTGGTTAGTGTTGGGAAGCAAGAGGAATGGACTGCAGGATGCTAGGCGCTaGGAGGTGGGACTGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EGLAPEAWLVLGSKRNGLQDARR*EVGLKA Trigger: GGCCTTCAGTCCCACCTCCCAGCGCCTAGCATCCTG...CAGTCCATTCCTCTTGCTTCCCAACACTAACCAAGCCTCTGGGGCCAGGCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR CCA 90 bp | GATGAAAGAGGCCAAGACTCAGAGCCTCTGAAGGTGAGGCTGGGGGCTGCCTCATTGGACCACTGCTGCTaGGATCCCAGATGCGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: DERGQDSEPLKVRLGAASLDHCC*DPRCGR Trigger: CCGTCCGCATCTGGGATCCCAGCAGCAGTGGTCCAA...TGAGGCAGCCCCCAGCCTCACCTTCAGAGGCTCTGAGTCTTGGCCTCTTTCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR CCA 90 bp | ACATCTCAAGGAGGGCCTGTGGCTAGGACAATGCCCCAGAGGAGTGGAGGCCCTAAGGAGGCCACGACATaGGCAGGTTCAGTGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TSQGGPVARTMPQRSGGPKEATT*AGSVLV Trigger: CACCAGCACTGAACCTGCCCATGTCGTGGCCTCCTT...AGGGCCTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTTGAGATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CCA 90 bp | ACATCTCAAGGAGGGCCTGTGGCTAGGACAATGCCCCAGAGGAGTGGAGGCCCTGGTGAGAGGCTGGCTTaGGTGACTCACCACCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TSQGGPVARTMPQRSGGPGERLA*VTHHLV Trigger: AACCAGGTGGTGAGTCACCCAAGCCAGCCTCTCACC...AGGGCCTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTTGAGATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR CCA 90 bp | TCTCAAGGAGGGCCTGTGGCTAGGACAATGCCCCAGAGGAGTGGAGGCCCTTCCTCATGCTTCTTGCGGTaGGCCGTGATCTCCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SQGGPVARTMPQRSGGPSSCFLR*AVISCT Trigger: TGTGCAGGAGATCACGGCCCACCGCAAGAAGCATGA...GGAAGGGCCTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR CCA 90 bp | AACACAAATGGCCCTGATCCTTACCTCAGCCCCACTGCCTGGCCCCGCTCCCTGAGGCCACTGCATGGATaGCCTCCTCATGCTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NTNGPDPYLSPTAWPRSLRPLHG*PPHASC Trigger: GCAAGAAGCATGAGGAGGCCATCCATGCAGTGGCCT...CAGGGAGCGGGGCCAGGCAGTGGGGCTGAGGTAAGGATCAGGGCCATTTGTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
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| CDS-3UTR CCA 90 bp | ACATCTCAAGGAGGGCCTGTGGCTAGGACAATGCCCCAGAGGAGTGGAGGCCCTTGGCAGGCCACTGCATaGATGGCCTCCTCATGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TSQGGPVARTMPQRSGGPWQATA*MASSCF Trigger: GAAGCATGAGGAGGCCATCCATGCAGTGGCCTGCCA...AGGGCCTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTTGAGATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR TCA 90 bp | GATGAAAGAGGCCAAGACTCAGAGCCTCTGAAGGTGAGGCTGGGGGCTGCCTCACAGGTTCAGTGCTGGTaGAGGCCACTGAGGTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DERGQDSEPLKVRLGAASQVQCW*RPLRWE Trigger: TTCCCACCTCAGTGGCCTTCACCAGCACTGAACCTG...TGAGGCAGCCCCCAGCCTCACCTTCAGAGGCTCTGAGTCTTGGCCTCTTTCATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR GCA 90 bp | CCAAAGGACACCCAGCCTGGGCTGTGTCAAACTCAGGACGACAGCTATGTCAGGTGCAGGAAGGGTATCTaGTCCAGCACCGAGCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: PKDTQPGLCQTQDDSYVRCRKGI*SSTEPP Trigger: GGGTGGCTCGGTGCTGGAGCAGATACCCTTCCTGCA...CCTGACATAGCTGTCGTCCTGAGTTTGACACAGCCCAGGCTGGGTGTCCTTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR GCA 90 bp | CAAGGAGGGCCTGTGGCTAGGACAATGCCCCAGAGGAGTGGAGGCCCTTCCCAGGCCGTAACTGCCTTCTaGAGGTTCCACAGTTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QGGPVARTMPQRSGGPSQAVTAF*RFHSLS Trigger: ACTCAAACTGTGGAACCTGCAGAAGGCAGTTACGGC...CTGGGAAGGGCCTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR GCA 90 bp | CAAGGAGGGCCTGTGGCTAGGACAATGCCCCAGAGGAGTGGAGGCCCTTCCCAGTTTCTTGGCCGTAACTaGCTTCTGCAGGTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: QGGPVARTMPQRSGGPSQFLGRN*LLQVPQ Trigger: CTGTGGAACCTGCAGAAGGCAGTTACGGCCAAGAAA...CTGGGAAGGGCCTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR GCA 90 bp | CTGGAGAGACAAAGGCAAGGCAGCTGGTTAGGACAGTGCCCCTCACTAGCTCCAGGCAGCTTGGACCACTaGTGCTGGGATCCCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LERQRQGSWLGQCPSLAPGSLDH*CWDPRC Trigger: GCATCTGGGATCCCAGCAGCAGTGGTCCAAGCTGCC...TGGAGCTAGTGAGGGGCACTGTCCTAACCAGCTGCCTTGCCTTTGTCTCTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
||
| CDS-3UTR GCA 90 bp | CCAAAGGACACCCAGCCTGGGCTGTGTCAAACTCAGGACGACAGCTATGTCAGGCACCTGGTTGATCTGTaGTGGGCCACTGCTCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PKDTQPGLCQTQDDSYVRHLVDL*WATAPS Trigger: CGAGGGAGCAGTGGCCCAGCACAGATCAACCAGGTG...CCTGACATAGCTGTCGTCCTGAGTTTGACACAGCCCAGGCTGGGTGTCCTTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR GCA 90 bp | AAGGCAAGGCAGCTGGTTAGGACAGTGCCCCTCACTAGCTCCAATTCCTCCCTCGCCCCTGTCGTCGTGTaGAGTGATGGTGAGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KARQLVRTVPLTSSNSSLAPVVV*SDGERL Trigger: CAGCCTCTCACCATCACTGCACACGACGACAGGGGC...GAGGGAGGAATTGGAGCTAGTGAGGGGCACTGTCCTAACCAGCTGCCTTGCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
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| CDS-3UTR GCA 90 bp | CTCTGCACAGCCCTTCATCTGATGAATGAGGGAGGGTGGCACTCTAGGAGGGAGTGTCCAGGAACCGGATaGCCCTGTCGTCGTGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LCTALHLMNEGGWHSRRECPGTG*PCRRVQ Trigger: CTGCACACGACGACAGGGGCATCCGGTTCCTGGACA...CTCCCTCCTAGAGTGCCACCCTCCCTCATTCATCAGATGAAGGGCTGTGCAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR CCA 90 bp | AGGACACCCAGCCTGGGCTGTGTCAAACTCAGGACGACAGCTATGTCAGGAGTTGGGTGTGCCAGGAGGTaGGACAGTCACTTTCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RTPSLGCVKLRTTAMSGVGCARR*DSHFRG Trigger: CCCCCGAAAGTGACTGTCCCACCTCCTGGCACACCC...AACTCCTGACATAGCTGTCGTCCTGAGTTTGACACAGCCCAGGCTGGGTGTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR CCA 90 bp | CTGGAGAGACAAAGGCAAGGCAGCTGGTTAGGACAGTGCCCCTCACTAGCTCCATTGGACCACTGCTGCTaGGATCCCAGATGCGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: LERQRQGSWLGQCPSLAPLDHCC*DPRCGR Trigger: CCGTCCGCATCTGGGATCCCAGCAGCAGTGGTCCAA...TGGAGCTAGTGAGGGGCACTGTCCTAACCAGCTGCCTTGCCTTTGTCTCTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
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| CDS-3UTR CCA 90 bp | AGGGCCCACTCCACCCTCTCTCTACATCTCAAGGAGGGCCTGTGGCTAGGACAAGGTACAGAGGCAGCTTaGACCACTGCTGCTGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: RAHSTLSLHLKEGLWLGQGTEAA*TTAAGI Trigger: GATCCCAGCAGCAGTGGTCCAAGCTGCCTCTGTACC...TTGTCCTAGCCACAGGCCCTCCTTGAGATGTAGAGAGAGGGTGGAGTGGGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR TCA 90 bp | GGGCCTTTAGCACCACCAGGCTCCAGGAAGATGAAAGAGGCCAAGACTCAGAGCGGCTGTTCTCCAGTGTaGCCGACTCTACAGGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GPLAPPGSRKMKEAKTQSGCSPV*PTLQGH Trigger: ATGGCCCTGTAGAGTCGGTCACACTGGAGAACAGCC...GCTCTGAGTCTTGGCCTCTTTCATCTTCCTGGAGCCTGGTGGTGCTAAAGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR TCA 90 bp | GAAAGGGCCTTTAGCACCACCAGGCTCCAGGAAGATGAAAGAGGCCAAGACTCACCAAAGGAACCTTCATaGGGCCGGGGCTGGGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ERAFSTTRLQEDERGQDSPKEPS*GRGWGV Trigger: CACACCCCAGCCCCGGCCTCATGAAGGTTCCTTTGG...TGAGTCTTGGCCTCTTTCATCTTCCTGGAGCCTGGTGGTGCTAAAGGCCCTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019220.16 |
||
| CDS-3UTR TCA 90 bp | GGGGCACAGGGCCCACTCCACCCTCTCTCTACATCTCAAGGAGGGCCTGTGGCTGGTTCCATGTCTTCTTaGAAGCGTCTTTGCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GAQGPLHPLSTSQGGPVAGSMSS*KRLCCQ Trigger: CTGACAGCAAAGACGCTTTCAAGAAGACATGGAACC...AGCCACAGGCCCTCCTTGAGATGTAGAGAGAGGGTGGAGTGGGCCCTGTGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR TCA 90 bp | GGGGTGACTCCTGGGGAAAGGGCCTTTAGCACCACCAGGCTCCAGGAAGATGAAGCAGGTTCCACAGTTTaGGTGTGCCATCCTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVTPGERAFSTTRLQEDEAGSTV*VCHPQR Trigger: CCTCTGAGGATGGCACACTCAAACTGTGGAACCTGC...TTCATCTTCCTGGAGCCTGGTGGTGCTAAAGGCCCTTTCCCCAGGAGTCACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR GCA 90 bp | GATGAAAGAGGCCAAGACTCAGAGCCTCTGAAGGTGAGGCTGGGGGCTGCCTCATCGTGTTGGATAAAGTaGAGGATCCCCGGCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DERGQDSEPLKVRLGAASSCWIK*RIPGRL Trigger: CAGCCTGCCGGGGATCCTGCACTTTATCCAACACGA...TGAGGCAGCCCCCAGCCTCACCTTCAGAGGCTCTGAGTCTTGGCCTCTTTCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR GCA 90 bp | GTCTTCATCCTCGCAGTTCTGCAGGAAGGGTATCTGCTCCAGCACCGAGCCACCTCGTGTTGGATAAAGTaGAGGATCCCCGGCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VFILAVLQEGYLLQHRATSCWIK*RIPGRL Trigger: CAGCCTGCCGGGGATCCTGCACTTTATCCAACACGA...GGTGGCTCGGTGCTGGAGCAGATACCCTTCCTGCAGAACTGCGAGGATGAAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184280.8 |
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| CDS-3UTR GCA 90 bp | GCTGTTGCTGCCCATGGTGACTGCCAGCACCGGGCCCCTGTGAGCTCGGAAAGCCGTTGCTTCTTATGCTaGACACTGTCCAGTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: AVAAHGDCQHRAPVSSESRCFLC*TLSSSS Trigger: TGATGAACTGGACAGTGTGCAGCATAAGAAGCAACG...GCTTTCCGAGCTCACAGGGGCCCGGTGCTGGCAGTCACCATGGGCAGCAACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184708.8 |
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| CDS-3UTR CCA 90 bp | TCTCTACATCTCAAGGAGGGCCTGTGGCTAGGACAATGCCCCAGAGGAGTGGAGGGGAACGCACACGCTTaGACCGCATGTCCAAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SLHLKEGLWLGQCPRGVEGNAHA*TACPRW Trigger: CCATCTTGGACATGCGGTCCAAGCGTGTGCGTTCCC...CTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTTGAGATGTAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR CCA 90 bp | GCCCCTGTGAGCTCGGAAAGCATGAATCGGCTCCACATCCAGTGCAGCATTTTTGGGTGTGCCAGGAGGTaGGACAGTCACTTTCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: APVSSESMNRLHIQCSIFGCARR*DSHFRG Trigger: CCCCCGAAAGTGACTGTCCCACCTCCTGGCACACCC...AAAAATGCTGCACTGGATGTGGAGCCGATTCATGCTTTCCGAGCTCACAGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184708.8 |
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| CDS-3UTR CCA 90 bp | AGGGCCCACTCCACCCTCTCTCTACATCTCAAGGAGGGCCTGTGGCTAGGACAAGGAATCTTCCAGCTGTaGATCCTGGCATCAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RAHSTLSLHLKEGLWLGQGIFQL*ILASAP Trigger: TGGGGCTGATGCCAGGATCCACAGCTGGAAGATTCC...TTGTCCTAGCCACAGGCCCTCCTTGAGATGTAGAGAGAGGGTGGAGTGGGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR CCA 90 bp | CTCTGCACAGCCCTTCATCTGATGAATGAGGGAGGGTGGCACTCTAGGAGGGAGCACACAGCATCCCCATaGCCTTCCAGGACATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LCTALHLMNEGGWHSRREHTASP*PSRTWL Trigger: GAGCCATGTCCTGGAAGGCCATGGGGATGCTGTGTG...CTCCCTCCTAGAGTGCCACCCTCCCTCATTCATCAGATGAAGGGCTGTGCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR CCA 90 bp | CTCTGCACAGCCCTTCATCTGATGAATGAGGGAGGGTGGCACTCTAGGAGGGAGGGTACAGAGGCAGCTTaGACCACTGCTGCTGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LCTALHLMNEGGWHSRREGTEAA*TTAAGI Trigger: GATCCCAGCAGCAGTGGTCCAAGCTGCCTCTGTACC...CTCCCTCCTAGAGTGCCACCCTCCCTCATTCATCAGATGAAGGGCTGTGCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR CCA 90 bp | ACATCTCAAGGAGGGCCTGTGGCTAGGACAATGCCCCAGAGGAGTGGAGGCCCTCATGTTCTCCATCCATaGGGAAGGTACAGAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSQGGPVARTMPQRSGGPHVLHP*GRYRGS Trigger: GCTGCCTCTGTACCTTCCCCATGGATGGAGAACATG...AGGGCCTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTTGAGATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR CCA 90 bp | CTCTGCACAGCCCTTCATCTGATGAATGAGGGAGGGTGGCACTCTAGGAGGGAGAAGGAGGCCACGACATaGGCAGGTTCAGTGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LCTALHLMNEGGWHSRREKEATT*AGSVLV Trigger: CACCAGCACTGAACCTGCCCATGTCGTGGCCTCCTT...CTCCCTCCTAGAGTGCCACCCTCCCTCATTCATCAGATGAAGGGCTGTGCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR CCA 90 bp | AAGGCAAGGCAGCTGGTTAGGACAGTGCCCCTCACTAGCTCCAATTCCTCCCTCCTGGTTGATCTGTGCTaGGCCACTGCTCCCTCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KARQLVRTVPLTSSNSSLLVDLC*ATAPSR Trigger: TCTCGAGGGAGCAGTGGCCCAGCACAGATCAACCAG...GAGGGAGGAATTGGAGCTAGTGAGGGGCACTGTCCTAACCAGCTGCCTTGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
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| CDS-3UTR CCA 90 bp | GAAGGCCTGGCCCCAGAGGCTTGGTTAGTGTTGGGAAGCAAGAGGAATGGACTGGGTGAGAGGCTGGCTTaGGTGACTCACCACCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: EGLAPEAWLVLGSKRNGLGERLA*VTHHLV Trigger: AACCAGGTGGTGAGTCACCCAAGCCAGCCTCTCACC...CAGTCCATTCCTCTTGCTTCCCAACACTAACCAAGCCTCTGGGGCCAGGCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| 3UTR CAA 72 bp | TCCAGCACCGAGCCACCCAGGCGCTCCTTGCCATCTTaGCCAGCTGCATTCCTCTTGATCTGTTCCTCGATC | + |
|
Preference number: 4 (lower is better) Translates to: SSTEPPRRSLPS*PAAFLLICSSI Trigger: GATCGAGGAACAGATCAAGAGGAATGCAGCTGGCAAAGATGGCAAGGAGCGCCTGGGTGGCTCGGTGCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184280.8 |
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| 3UTR CAA 72 bp | GGTATCTGCTCCAGCACCGAGCCACCCAGGCGCTCCTaGCCATCTTTGCCAGCTGCATTCCTCTTGATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GICSSTEPPRRS*PSLPAAFLLIC Trigger: ACAGATCAAGAGGAATGCAGCTGGCAAAGATGGCAAGGAGCGCCTGGGTGGCTCGGTGCTGGAGCAGATACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184280.8 |
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| CDS-3UTR TCA 90 bp | GAAAGGGCCTTTAGCACCACCAGGCTCCAGGAAGATGAAAGAGGCCAAGACTCACATACTCCAGCATCTTaGTCCGCCGCACCAGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ERAFSTTRLQEDERGQDSHTPAS*SAAPGP Trigger: CGGACCTGGTGCGGCGGATCAAGATGCTGGAGTATG...TGAGTCTTGGCCTCTTTCATCTTCCTGGAGCCTGGTGGTGCTAAAGGCCCTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | CTCTGCACAGCCCTTCATCTGATGAATGAGGGAGGGTGGCACTCTAGGAGGGAGGAATTCCCTGGAGTTTaGCCCGACGGCTTTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LCTALHLMNEGGWHSRREEFPGV*PDGFPA Trigger: AGCTGGAAAGCCGTCGGGTCAAACTCCAGGGAATTC...CTCCCTCCTAGAGTGCCACCCTCCCTCATTCATCAGATGAAGGGCTGTGCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | AGCTGTGGATCCTGGCATCAGCCCCACCACTGTAACAGTACTCGCTGTTGCTGCGAATTCCCTGGAGTTTaGCCCGACGGCTTTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SCGSWHQPHHCNSTRCCCEFPGV*PDGFPA Trigger: AGCTGGAAAGCCGTCGGGTCAAACTCCAGGGAATTC...GCAGCAACAGCGAGTACTGTTACAGTGGTGGGGCTGATGCCAGGATCCACAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184708.8 |
||
| CDS-3UTR TCA 90 bp | CCAAAGGACACCCAGCCTGGGCTGTGTCAAACTCAGGACGACAGCTATGTCAGGGCAGGTTCCACAGTTTaGGTGTGCCATCCTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PKDTQPGLCQTQDDSYVRAGSTV*VCHPQR Trigger: CCTCTGAGGATGGCACACTCAAACTGTGGAACCTGC...CCTGACATAGCTGTCGTCCTGAGTTTGACACAGCCCAGGCTGGGTGTCCTTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | GAGACAAAGGCAAGGCAGCTGGTTAGGACAGTGCCCCTCACTAGCTCCAATTCCTCTTGCGGTGGGCCGTaGTCTCCTGCACACATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ETKARQLVRTVPLTSSNSSCGGP*SPAHMS Trigger: AGACATGTGTGCAGGAGATCACGGCCCACCGCAAGA...GGAATTGGAGCTAGTGAGGGGCACTGTCCTAACCAGCTGCCTTGCCTTTGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
||
| CDS-3UTR GCA 90 bp | GATGAAAGAGGCCAAGACTCAGAGCCTCTGAAGGTGAGGCTGGGGGCTGCCTCACTCGGCTTCGAAGCGTaGCCACTCGTGTTGGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: DERGQDSEPLKVRLGAASLGFEA*PLVLDK Trigger: TTTATCCAACACGAGTGGGCACGCTTCGAAGCCGAG...TGAGGCAGCCCCCAGCCTCACCTTCAGAGGCTCTGAGTCTTGGCCTCTTTCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR GCA 90 bp | GAAAGGGCCTTTAGCACCACCAGGCTCCAGGAAGATGAAAGAGGCCAAGACTCAGCCCCTGTCGTCGTGTaGAGTGATGGTGAGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERAFSTTRLQEDERGQDSAPVVV*SDGERL Trigger: CAGCCTCTCACCATCACTGCACACGACGACAGGGGC...TGAGTCTTGGCCTCTTTCATCTTCCTGGAGCCTGGTGGTGCTAAAGGCCCTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR GCA 90 bp | GGGTATAGGGGTGTCTTCTGGGGCAAGGACACTGGGTGTCTGCATTCCTATCTATGGATGGCCTCCTCATaGTTCTTGCGGTGGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: GYRGVFWGKDTGCLHSYLWMASS*FLRWAV Trigger: CACGGCCCACCGCAAGAAGCATGAGGAGGCCATCCA...TAGATAGGAATGCAGACACCCAGTGTCCTTGCCCCAGAAGACACCCCTATACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
||
| CDS-3UTR GCA 90 bp | GGGCCTTTAGCACCACCAGGCTCCAGGAAGATGAAAGAGGCCAAGACTCAGAGCAGCACTGGCAATAAGTaGCTTGCTGGGATGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GPLAPPGSRKMKEAKTQSSTGNK*LAGMAG Trigger: GCCTGCCATCCCAGCAAGGCACTTATTGCCAGTGCT...GCTCTGAGTCTTGGCCTCTTTCATCTTCCTGGAGCCTGGTGGTGCTAAAGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR CCA 90 bp | CTCCTGGGGAAAGGGCCTTTAGCACCACCAGGCTCCAGGAAGATGAAAGAGGCCCTCCTTCCACACCAATaGGCTGTTCTCCAGTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLGKGPLAPPGSRKMKEALLPHQ*AVLQCD Trigger: GTCACACTGGAGAACAGCCCATTGGTGTGGAAGGAG...GGCCTCTTTCATCTTCCTGGAGCCTGGTGGTGCTAAAGGCCCTTTCCCCAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR CCA 90 bp | TCTCTACATCTCAAGGAGGGCCTGTGGCTAGGACAATGCCCCAGAGGAGTGGAGGGAATCTTCCAGCTGTaGATCCTGGCATCAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLHLKEGLWLGQCPRGVEGIFQL*ILASAP Trigger: TGGGGCTGATGCCAGGATCCACAGCTGGAAGATTCC...CTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTTGAGATGTAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CCA 90 bp | AGGACACCCAGCCTGGGCTGTGTCAAACTCAGGACGACAGCTATGTCAGGAGTTCACACAGCATCCCCATaGCCTTCCAGGACATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RTPSLGCVKLRTTAMSGVHTASP*PSRTWL Trigger: GAGCCATGTCCTGGAAGGCCATGGGGATGCTGTGTG...AACTCCTGACATAGCTGTCGTCCTGAGTTTGACACAGCCCAGGCTGGGTGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR CCA 90 bp | GAGACAAAGGCAAGGCAGCTGGTTAGGACAGTGCCCCTCACTAGCTCCAATTCCGGTACAGAGGCAGCTTaGACCACTGCTGCTGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: ETKARQLVRTVPLTSSNSGTEAA*TTAAGI Trigger: GATCCCAGCAGCAGTGGTCCAAGCTGCCTCTGTACC...GGAATTGGAGCTAGTGAGGGGCACTGTCCTAACCAGCTGCCTTGCCTTTGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
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| CDS-3UTR CCA 90 bp | GAGACAAAGGCAAGGCAGCTGGTTAGGACAGTGCCCCTCACTAGCTCCAATTCCGGTGAGAGGCTGGCTTaGGTGACTCACCACCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ETKARQLVRTVPLTSSNSGERLA*VTHHLV Trigger: AACCAGGTGGTGAGTCACCCAAGCCAGCCTCTCACC...GGAATTGGAGCTAGTGAGGGGCACTGTCCTAACCAGCTGCCTTGCCTTTGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
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| CDS-3UTR TCA 90 bp | GCTGCCCATGGTGACTGCCAGCACCGGGCCCCTGTGAGCTCGGAAAGCATGAATATTGATGGCATCTTCTaGGTCATCCTCTTCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AAHGDCQHRAPVSSESMNIDGIF*VILFIL Trigger: GAGGATGAAGAGGATGACTCAGAAGATGCCATCAAT...ATTCATGCTTTCCGAGCTCACAGGGGCCCGGTGCTGGCAGTCACCATGGGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184708.8 |
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| CDS-3UTR TCA 90 bp | GCTGTTGCTGCCCATGGTGACTGCCAGCACCGGGCCCCTGTGAGCTCGGAAAGCGGAAATCAAACTCATTaGTGGCATCTTCTGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AVAAHGDCQHRAPVSSESGNQTH*WHLLSH Trigger: ATGACTCAGAAGATGCCATCAATGAGTTTGATTTCC...GCTTTCCGAGCTCACAGGGGCCCGGTGCTGGCAGTCACCATGGGCAGCAACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184708.8 |
||
| CDS-3UTR TCA 90 bp | TCCATGGGGAAGGTACAGAGGCAGCTTGGACCACTGCTGCTGGGATCCCAGATGCATGATGAAGACGTCTaGGGAGAAGCCAAAGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: SMGKVQRQLGPLLLGSQMHDEDV*GEAKGT Trigger: GGTTCCTTTGGCTTCTCCTCAGACGTCTTCATCATG...CATCTGGGATCCCAGCAGCAGTGGTCCAAGCTGCCTCTGTACCTTCCCCATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
||
| CDS-3UTR TCA 90 bp | AGGGCCCACTCCACCCTCTCTCTACATCTCAAGGAGGGCCTGTGGCTAGGACAACATATGGGTCCATGTTaGGGTCAGGAATCTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RAHSTLSLHLKEGLWLGQHMGPC*GQESSS Trigger: GCTGGAAGATTCCTGACCTCAACATGGACCCATATG...TTGTCCTAGCCACAGGCCCTCCTTGAGATGTAGAGAGAGGGTGGAGTGGGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | GAAAGGGCCTTTAGCACCACCAGGCTCCAGGAAGATGAAAGAGGCCAAGACTCATCTTGCGGTGGGCCGTaGTCTCCTGCACACATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ERAFSTTRLQEDERGQDSSCGGP*SPAHMS Trigger: AGACATGTGTGCAGGAGATCACGGCCCACCGCAAGA...TGAGTCTTGGCCTCTTTCATCTTCCTGGAGCCTGGTGGTGCTAAAGGCCCTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR GCA 90 bp | AGGACACCCAGCCTGGGCTGTGTCAAACTCAGGACGACAGCTATGTCAGGAGTTTCGTGTTGGATAAAGTaGAGGATCCCCGGCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RTPSLGCVKLRTTAMSGVSCWIK*RIPGRL Trigger: CAGCCTGCCGGGGATCCTGCACTTTATCCAACACGA...AACTCCTGACATAGCTGTCGTCCTGAGTTTGACACAGCCCAGGCTGGGTGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR GCA 90 bp | CCAAAGGACACCCAGCCTGGGCTGTGTCAAACTCAGGACGACAGCTATGTCAGGCTCGGCTTCGAAGCGTaGCCACTCGTGTTGGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: PKDTQPGLCQTQDDSYVRLGFEA*PLVLDK Trigger: TTTATCCAACACGAGTGGGCACGCTTCGAAGCCGAG...CCTGACATAGCTGTCGTCCTGAGTTTGACACAGCCCAGGCTGGGTGTCCTTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCAGCACCGGGCCCCTGTGAGCTCGGAAAGCATGAATCGGCTCCACATCCAACACGTTGCTTCTTATaGTGCACACTGTCCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPAPGPCELGKHESAPHPTRCFL*CTLSSS Trigger: TGAACTGGACAGTGTGCAGCATAAGAAGCAACGTGT...TGGATGTGGAGCCGATTCATGCTTTCCGAGCTCACAGGGGCCCGGTGCTGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184708.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTGGGGAAAGGGCCTTTAGCACCACCAGGCTCCAGGAAGATGAAAGAGGCCGCCGTAACTGCCTTCTaGAGGTTCCACAGTTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLGKGPLAPPGSRKMKEAAVTAF*RFHSLS Trigger: ACTCAAACTGTGGAACCTGCAGAAGGCAGTTACGGC...GGCCTCTTTCATCTTCCTGGAGCCTGGTGGTGCTAAAGGCCCTTTCCCCAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR GCA 90 bp | GGGCCTTTAGCACCACCAGGCTCCAGGAAGATGAAAGAGGCCAAGACTCAGAGCCGGCTCCACATCCAGTaGAGCATTTTTCTTGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GPLAPPGSRKMKEAKTQSRLHIQ*SIFLGR Trigger: ACGGCCAAGAAAAATGCTGCACTGGATGTGGAGCCG...GCTCTGAGTCTTGGCCTCTTTCATCTTCCTGGAGCCTGGTGGTGCTAAAGGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR CCA 90 bp | GAAGGCCTGGCCCCAGAGGCTTGGTTAGTGTTGGGAAGCAAGAGGAATGGACTGCTCCTTCCACACCAATaGGCTGTTCTCCAGTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: EGLAPEAWLVLGSKRNGLLLPHQ*AVLQCD Trigger: GTCACACTGGAGAACAGCCCATTGGTGTGGAAGGAG...CAGTCCATTCCTCTTGCTTCCCAACACTAACCAAGCCTCTGGGGCCAGGCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CCA 90 bp | AGGGCCCACTCCACCCTCTCTCTACATCTCAAGGAGGGCCTGTGGCTAGGACAAACCGCATGTCCAAGATaGTATCTGTGTAGCCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RAHSTLSLHLKEGLWLGQTACPR*YLCSPP Trigger: AGGTGGGCTACACAGATACCATCTTGGACATGCGGT...TTGTCCTAGCCACAGGCCCTCCTTGAGATGTAGAGAGAGGGTGGAGTGGGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR CCA 90 bp | CACCGAGCCACCCAGGCGCTCCTTGCCATCTTTGCCAGCTGCATTCCTCTTGATACCGCATGTCCAAGATaGTATCTGTGTAGCCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: HRATQALLAIFASCIPLDTACPR*YLCSPP Trigger: AGGTGGGCTACACAGATACCATCTTGGACATGCGGT...ATCAAGAGGAATGCAGCTGGCAAAGATGGCAAGGAGCGCCTGGGTGGCTCGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184280.8 |
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| CDS-3UTR CCA 90 bp | CTGTCAGACAGATCACAGCTGAGGTCGTTGTCATTGGTGACGGTGAGATCTGCCGGGAACGCACACGCTTaGACCGCATGTCCAAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LSDRSQLRSLSLVTVRSAGNAHA*TACPRW Trigger: CCATCTTGGACATGCGGTCCAAGCGTGTGCGTTCCC...GGCAGATCTCACCGTCACCAATGACAACGACCTCAGCTGTGATCTGTCTGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184708.8 |
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| CDS-3UTR CCA 90 bp | CTATCTAGAACACAAATGGCCCTGATCCTTACCTCAGCCCCACTGCCTGGCCCCCATGTTCTCCATCCATaGGGAAGGTACAGAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSRTQMALILTSAPLPGPHVLHP*GRYRGS Trigger: GCTGCCTCTGTACCTTCCCCATGGATGGAGAACATG...GGGGCCAGGCAGTGGGGCTGAGGTAAGGATCAGGGCCATTTGTGTTCTAGATAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
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| CDS-3UTR CCA 90 bp | GAAGGCCTGGCCCCAGAGGCTTGGTTAGTGTTGGGAAGCAAGAGGAATGGACTGCCAGGTGGGCCACCATaGAATGCACAGATTTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGLAPEAWLVLGSKRNGLPGGPP*NAQIYL Trigger: CAGGTAAATCTGTGCATTCCATGGTGGCCCACCTGG...CAGTCCATTCCTCTTGCTTCCCAACACTAACCAAGCCTCTGGGGCCAGGCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR CCA 90 bp | GGGCCTTTAGCACCACCAGGCTCCAGGAAGATGAAAGAGGCCAAGACTCAGAGCCCAGGTGGGCCACCATaGAATGCACAGATTTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: GPLAPPGSRKMKEAKTQSPGGPP*NAQIYL Trigger: CAGGTAAATCTGTGCATTCCATGGTGGCCCACCTGG...GCTCTGAGTCTTGGCCTCTTTCATCTTCCTGGAGCCTGGTGGTGCTAAAGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR CCA 90 bp | AGGACACCCAGCCTGGGCTGTGTCAAACTCAGGACGACAGCTATGTCAGGAGTTAGGCCACTGCATGGATaGCCTCCTCATGCTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RTPSLGCVKLRTTAMSGVRPLHG*PPHASC Trigger: GCAAGAAGCATGAGGAGGCCATCCATGCAGTGGCCT...AACTCCTGACATAGCTGTCGTCCTGAGTTTGACACAGCCCAGGCTGGGTGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| 3UTR CAA 72 bp | GCGTCTTTGCTGTCAGACAGATCACAGCTGAGGTCGTaGTCATTGGTGACGGTGAGATCTGCCAAGTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ASLLSDRSQLRS*SLVTVRSAKSP Trigger: GGGGGACTTGGCAGATCTCACCGTCACCAATGACAACGACCTCAGCTGTGATCTGTCTGACAGCAAAGACGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184708.8 |
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| CDS-3UTR TCA 90 bp | TCTCTACATCTCAAGGAGGGCCTGTGGCTAGGACAATGCCCCAGAGGAGTGGAGGTCTTCTTCTCCCCCTaGTTCAGGTCTGTACCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SLHLKEGLWLGQCPRGVEVFFSP*FRSVPN Trigger: GTTTGGTACAGACCTGAATCAGGGGGAGAAGAAGAC...CTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTTGAGATGTAGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR TCA 90 bp | CCAGCACCGAGCCACCCAGGCGCTCCTTGCCATCTTTGCCAGCTGCATTCCTCTATTGGAGACTTGTTCTaGCAGATCTGTCTTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PAPSHPGAPCHLCQLHSSIGDLF*QICLLL Trigger: GAGAAGAAGACAGATCTGTCAGAACAAGTCTCCAAT...AGAGGAATGCAGCTGGCAAAGATGGCAAGGAGCGCCTGGGTGGCTCGGTGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184280.8 |
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| CDS-3UTR TCA 90 bp | CCAAAGGACACCCAGCCTGGGCTGTGTCAAACTCAGGACGACAGCTATGTCAGGCATGATGAAGACGTCTaGGGAGAAGCCAAAGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: PKDTQPGLCQTQDDSYVRHDEDV*GEAKGT Trigger: GGTTCCTTTGGCTTCTCCTCAGACGTCTTCATCATG...CCTGACATAGCTGTCGTCCTGAGTTTGACACAGCCCAGGCTGGGTGTCCTTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019220.16 |
||
| CDS-3UTR TCA 90 bp | CCAAAGGACACCCAGCCTGGGCTGTGTCAAACTCAGGACGACAGCTATGTCAGGCATATGGGTCCATGTTaGGGTCAGGAATCTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PKDTQPGLCQTQDDSYVRHMGPC*GQESSS Trigger: GCTGGAAGATTCCTGACCTCAACATGGACCCATATG...CCTGACATAGCTGTCGTCCTGAGTTTGACACAGCCCAGGCTGGGTGTCCTTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR TCA 90 bp | AAGGCAAGGCAGCTGGTTAGGACAGTGCCCCTCACTAGCTCCAATTCCTCCCTCACAGTCGTGGCTTCCTaGCATCAAGAACACGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: KARQLVRTVPLTSSNSSLTVVAS*HQEHAI Trigger: AATGGCGTGTTCTTGATGTCAGGAAGCCACGACTGT...GAGGGAGGAATTGGAGCTAGTGAGGGGCACTGTCCTAACCAGCTGCCTTGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
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| CDS-3UTR GCA 90 bp | GGGTTCCATGTCTTCTTGAAAGCGTCTTTGCTGTCAGACAGATCACAGCTGAGGTGCAGGAAGGGTATCTaGTCCAGCACCGAGCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: GFHVFLKASLLSDRSQLRCRKGI*SSTEPP Trigger: GGGTGGCTCGGTGCTGGAGCAGATACCCTTCCTGCA...CCTCAGCTGTGATCTGTCTGACAGCAAAGACGCTTTCAAGAAGACATGGAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184708.8 |
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| CDS-3UTR GCA 90 bp | AAGGCAAGGCAGCTGGTTAGGACAGTGCCCCTCACTAGCTCCAATTCCTCCCTCTGGGCCGTGATCTCCTaGACACATGTCTTGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KARQLVRTVPLTSSNSSLWAVIS*THVLLS Trigger: AGACAACAAGACATGTGTGCAGGAGATCACGGCCCA...GAGGGAGGAATTGGAGCTAGTGAGGGGCACTGTCCTAACCAGCTGCCTTGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
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| CDS-3UTR CCA 90 bp | TCACAGCTGAGGTCGTTGTCATTGGTGACGGTGAGATCTGCCAAGTCCCCCAGGTCAGCAAGAATTCCCTaGAGTTTGACCCGACGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQLRSLSLVTVRSAKSPRSARIP*SLTRRL Trigger: AAGCCGTCGGGTCAAACTCCAGGGAATTCTTGCTGA...CCTGGGGGACTTGGCAGATCTCACCGTCACCAATGACAACGACCTCAGCTGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184708.8 |
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| CDS-3UTR CCA 90 bp | CCTGGCATCTTCTTTCATCTTGGTCAAAATCAGATCCCAAAGGACACCCAGCCTCAGGATGCTAGGCGCTaGGAGGTGGGACTGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGIFFHLGQNQIPKDTQPQDARR*EVGLKA Trigger: GGCCTTCAGTCCCACCTCCCAGCGCCTAGCATCCTG...AGGCTGGGTGTCCTTTGGGATCTGATTTTGACCAAGATGAAAGAAGATGCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR CCA 90 bp | TTCCTATCTAGAACACAAATGGCCCTGATCCTTACCTCAGCCCCACTGCCTGGCTCATGCTTCTTGCGGTaGGCCGTGATCTCCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: FLSRTQMALILTSAPLPGSCFLR*AVISCT Trigger: TGTGCAGGAGATCACGGCCCACCGCAAGAAGCATGA...GCCAGGCAGTGGGGCTGAGGTAAGGATCAGGGCCATTTGTGTTCTAGATAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
||
| CDS-3UTR TCA 90 bp | TCTCTACATCTCAAGGAGGGCCTGTGGCTAGGACAATGCCCCAGAGGAGTGGAGCAGCTGCATTCCTCTTaGTCTGTTCCTCGATCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLHLKEGLWLGQCPRGVEQLHSS*SVPRSV Trigger: AACAGATCGAGGAACAGATCAAGAGGAATGCAGCTG...CTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTTGAGATGTAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR TCA 90 bp | GGGCCTTTAGCACCACCAGGCTCCAGGAAGATGAAAGAGGCCAAGACTCAGAGCGGTTCCATGTCTTCTTaGAAGCGTCTTTGCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GPLAPPGSRKMKEAKTQSGSMSS*KRLCCQ Trigger: CTGACAGCAAAGACGCTTTCAAGAAGACATGGAACC...GCTCTGAGTCTTGGCCTCTTTCATCTTCCTGGAGCCTGGTGGTGCTAAAGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | GTCTTCTTGAAAGCGTCTTTGCTGTCAGACAGATCACAGCTGAGGTCGTTGTCAAGAATCACAGCTTCATaGGGCCGGGGCTGGGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VFLKASLLSDRSQLRSLSRITAS*GRGWGV Trigger: CACACCCCAGCCCCGGCCTCATGAAGCTGTGATTCT...TGACAACGACCTCAGCTGTGATCTGTCTGACAGCAAAGACGCTTTCAAGAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184708.8 |
||
| CDS-3UTR GCA 90 bp | AGGGCCCACTCCACCCTCTCTCTACATCTCAAGGAGGGCCTGTGGCTAGGACAAACACGTTGCTTCTTATaGTGCACACTGTCCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RAHSTLSLHLKEGLWLGQTRCFL*CTLSSS Trigger: TGAACTGGACAGTGTGCAGCATAAGAAGCAACGTGT...TTGTCCTAGCCACAGGCCCTCCTTGAGATGTAGAGAGAGGGTGGAGTGGGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR GCA 90 bp | CCTGGCATCTTCTTTCATCTTGGTCAAAATCAGATCCCAAAGGACACCCAGCCTGGCAGCTTGGACCACTaGTGCTGGGATCCCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: PGIFFHLGQNQIPKDTQPGSLDH*CWDPRC Trigger: GCATCTGGGATCCCAGCAGCAGTGGTCCAAGCTGCC...AGGCTGGGTGTCCTTTGGGATCTGATTTTGACCAAGATGAAAGAAGATGCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR GCA 90 bp | CTAGGAGGGAGCCTGGCATCTTCTTTCATCTTGGTCAAAATCAGATCCCAAAGGGGCAGCTTGGACCACTaGTGCTGGGATCCCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LGGSLASSFILVKIRSQRGSLDH*CWDPRC Trigger: GCATCTGGGATCCCAGCAGCAGTGGTCCAAGCTGCC...CCTTTGGGATCTGATTTTGACCAAGATGAAAGAAGATGCCAGGCTCCCTCCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR GCA 90 bp | AGGACACCCAGCCTGGGCTGTGTCAAACTCAGGACGACAGCTATGTCAGGAGTTTGGGCCGTGATCTCCTaGACACATGTCTTGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RTPSLGCVKLRTTAMSGVWAVIS*THVLLS Trigger: AGACAACAAGACATGTGTGCAGGAGATCACGGCCCA...AACTCCTGACATAGCTGTCGTCCTGAGTTTGACACAGCCCAGGCTGGGTGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CCA 90 bp | CCAGCACCGAGCCACCCAGGCGCTCCTTGCCATCTTTGCCAGCTGCATTCCTCTTCAGTTTATGATATTTaGCCCTCTCCTGCTTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PAPSHPGAPCHLCQLHSSSVYDI*PSPALV Trigger: CACTAAAGCAGGAGAGGGCCAAATATCATAAACTGA...AGAGGAATGCAGCTGGCAAAGATGGCAAGGAGCGCCTGGGTGGCTCGGTGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184280.8 |
||
| CDS-3UTR CCA 90 bp | CTAGGAGGGAGCCTGGCATCTTCTTTCATCTTGGTCAAAATCAGATCCCAAAGGTTGGACCACTGCTGCTaGGATCCCAGATGCGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: LGGSLASSFILVKIRSQRLDHCC*DPRCGR Trigger: CCGTCCGCATCTGGGATCCCAGCAGCAGTGGTCCAA...CCTTTGGGATCTGATTTTGACCAAGATGAAAGAAGATGCCAGGCTCCCTCCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CCA 90 bp | AGACAAAGGCAAGGCAGCTGGTTAGGACAGTGCCCCTCACTAGCTCCAATTCCTCCAGGTGGGCCACCATaGAATGCACAGATTTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: RQRQGSWLGQCPSLAPIPPGGPP*NAQIYL Trigger: CAGGTAAATCTGTGCATTCCATGGTGGCCCACCTGG...AGGAATTGGAGCTAGTGAGGGGCACTGTCCTAACCAGCTGCCTTGCCTTTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
||
| CDS-3UTR CCA 90 bp | GTGTCTGCATTCCTATCTAGAACACAAATGGCCCTGATCCTTACCTCAGCCCCATGGCAGGCCACTGCATaGATGGCCTCCTCATGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSAFLSRTQMALILTSAPWQATA*MASSCF Trigger: GAAGCATGAGGAGGCCATCCATGCAGTGGCCTGCCA...TGGGGCTGAGGTAAGGATCAGGGCCATTTGTGTTCTAGATAGGAATGCAGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
||
| 3UTR CAA 72 bp | GGCACTCTAGGAGGGAGCCTGGCATCTTCTTTCATCTaGGTCAAAATCAGATCCCAAAGGACACCCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTLGGSLASSFI*VKIRSQRTPSL Trigger: CAGGCTGGGTGTCCTTTGGGATCTGATTTTGACCAAGATGAAAGAAGATGCCAGGCTCCCTCCTAGAGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| 3UTR CAA 72 bp | CCATGTCTTCTTGAAAGCGTATCACAGCTGAGGTCGTaGTCATTGGTGACGGTGAGATCTGCCAAGTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PCLLESVSQLRS*SLVTVRSAKSP Trigger: GGGGGACTTGGCAGATCTCACCGTCACCAATGACAACGACCTCAGCTGTGATACGCTTTCAAGAAGACATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185011.8 |
||
| CDS-3UTR TCA 90 bp | GAAAGGGCCTTTAGCACCACCAGGCTCCAGGAAGATGAAAGAGGCCAAGACTCAGTCTTCTTCTCCCCCTaGTTCAGGTCTGTACCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ERAFSTTRLQEDERGQDSVFFSP*FRSVPN Trigger: GTTTGGTACAGACCTGAATCAGGGGGAGAAGAAGAC...TGAGTCTTGGCCTCTTTCATCTTCCTGGAGCCTGGTGGTGCTAAAGGCCCTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | TTCTTATGCTGCACACTGTCCAGTTCATCATCCTCATCGCTGTCTTCATCCTCGGGCTGTTCTCCAGTGTaGCCGACTCTACAGGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FLCCTLSSSSSSSLSSSSGCSPV*PTLQGH Trigger: ATGGCCCTGTAGAGTCGGTCACACTGGAGAACAGCC...CGAGGATGAAGACAGCGATGAGGATGATGAACTGGACAGTGTGCAGCATAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184280.8 |
||
| CDS-3UTR TCA 90 bp | GAAGGCCTGGCCCCAGAGGCTTGGTTAGTGTTGGGAAGCAAGAGGAATGGACTGATTGATGGCATCTTCTaGGTCATCCTCTTCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EGLAPEAWLVLGSKRNGLIDGIF*VILFIL Trigger: GAGGATGAAGAGGATGACTCAGAAGATGCCATCAAT...CAGTCCATTCCTCTTGCTTCCCAACACTAACCAAGCCTCTGGGGCCAGGCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | GCCCCTGTGAGCTCGGAAAGCATGAATCGGCTCCACATCCAGTGCAGCATTTTTCATGATGAAGACGTCTaGGGAGAAGCCAAAGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: APVSSESMNRLHIQCSIFHDEDV*GEAKGT Trigger: GGTTCCTTTGGCTTCTCCTCAGACGTCTTCATCATG...AAAAATGCTGCACTGGATGTGGAGCCGATTCATGCTTTCCGAGCTCACAGGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000184708.8 ENSMUST00000185011.8 |
||
| CDS-3UTR GCA 90 bp | AGCCTGGCATCTTCTTTCATCTTGGTCAAAATCAGATCCCAAAGGACACCCAGCCACCCAGGCGCTCCTTaGCATCTTTGCCAGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLASSFILVKIRSQRTPSHPGAP*HLCQLH Trigger: ATGCAGCTGGCAAAGATGGCAAGGAGCGCCTGGGTG...GCTGGGTGTCCTTTGGGATCTGATTTTGACCAAGATGAAAGAAGATGCCAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR GCA 90 bp | TCACACAGTGATAACGTGGGGTGGGTGCCATTAAAATCCCATTCCTTTATACAGTGCTGGGATCCCAGATaGGGACGGTGCCATCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SHSDNVGWVPLKSHSFIQCWDPR*GRCHRQ Trigger: CTGCCGATGGCACCGTCCGCATCTGGGATCCCAGCA...CTGTATAAAGGAATGGGATTTTAATGGCACCCACCCCACGTTATCACTGTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR GCA 90 bp | GTGTCTGCATTCCTATCTAGAACACAAATGGCCCTGATCCTTACCTCAGCCCCAAGCACTGGCAATAAGTaGCTTGCTGGGATGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VSAFLSRTQMALILTSAPSTGNK*LAGMAG Trigger: GCCTGCCATCCCAGCAAGGCACTTATTGCCAGTGCT...TGGGGCTGAGGTAAGGATCAGGGCCATTTGTGTTCTAGATAGGAATGCAGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
||
| CDS-3UTR CCA 90 bp | AGCCTGGCATCTTCTTTCATCTTGGTCAAAATCAGATCCCAAAGGACACCCAGCGGGAACGCACACGCTTaGACCGCATGTCCAAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SLASSFILVKIRSQRTPSGNAHA*TACPRW Trigger: CCATCTTGGACATGCGGTCCAAGCGTGTGCGTTCCC...GCTGGGTGTCCTTTGGGATCTGATTTTGACCAAGATGAAAGAAGATGCCAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CCA 90 bp | TCACACAGTGATAACGTGGGGTGGGTGCCATTAAAATCCCATTCCTTTATACAGGCTGACTGGCTGTGGTaGAAGGCCAGGGAGCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SHSDNVGWVPLKSHSFIQADWLW*KARERM Trigger: CATCCGCTCCCTGGCCTTCCACCACAGCCAGTCAGC...CTGTATAAAGGAATGGGATTTTAATGGCACCCACCCCACGTTATCACTGTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CCA 90 bp | AGCCTGGCATCTTCTTTCATCTTGGTCAAAATCAGATCCCAAAGGACACCCAGCTCCAGCTGTGGATCCTaGCATCAGCCCCACCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLASSFILVKIRSQRTPSSSCGS*HQPHHC Trigger: ACAGTGGTGGGGCTGATGCCAGGATCCACAGCTGGA...GCTGGGTGTCCTTTGGGATCTGATTTTGACCAAGATGAAAGAAGATGCCAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CCA 90 bp | CACTGGGTGTCTGCATTCCTATCTAGAACACAAATGGCCCTGATCCTTACCTCAAAGGAGGCCACGACATaGGCAGGTTCAGTGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HWVSAFLSRTQMALILTSKEATT*AGSVLV Trigger: CACCAGCACTGAACCTGCCCATGTCGTGGCCTCCTT...TGAGGTAAGGATCAGGGCCATTTGTGTTCTAGATAGGAATGCAGACACCCAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
||
| CDS-3UTR CCA 90 bp | AGCCTGGCATCTTCTTTCATCTTGGTCAAAATCAGATCCCAAAGGACACCCAGCCTGGTTGATCTGTGCTaGGCCACTGCTCCCTCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLASSFILVKIRSQRTPSLVDLC*ATAPSR Trigger: TCTCGAGGGAGCAGTGGCCCAGCACAGATCAACCAG...GCTGGGTGTCCTTTGGGATCTGATTTTGACCAAGATGAAAGAAGATGCCAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CCA 90 bp | CCTGGCATCTTCTTTCATCTTGGTCAAAATCAGATCCCAAAGGACACCCAGCCTCTGGTTGATCTGTGCTaGGCCACTGCTCCCTCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGIFFHLGQNQIPKDTQPLVDLC*ATAPSR Trigger: TCTCGAGGGAGCAGTGGCCCAGCACAGATCAACCAG...AGGCTGGGTGTCCTTTGGGATCTGATTTTGACCAAGATGAAAGAAGATGCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | AGGACACCCAGCCTGGGCTGTGTCAAACTCAGGACGACAGCTATGTCAGGAGTTATTGATGGCATCTTCTaGGTCATCCTCTTCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RTPSLGCVKLRTTAMSGVIDGIF*VILFIL Trigger: GAGGATGAAGAGGATGACTCAGAAGATGCCATCAAT...AACTCCTGACATAGCTGTCGTCCTGAGTTTGACACAGCCCAGGCTGGGTGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | CTAGGAGGGAGCCTGGCATCTTCTTTCATCTTGGTCAAAATCAGATCCCAAAGGGCTGGTGAAGGCCACTaGGGTGGGAATTCCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGGSLASSFILVKIRSQRAGEGH*GGNSMF Trigger: GAACATGGAATTCCCACCTCAGTGGCCTTCACCAGC...CCTTTGGGATCTGATTTTGACCAAGATGAAAGAAGATGCCAGGCTCCCTCCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR GCA 90 bp | AGACTATCACACAGTGATAACGTGGGGTGGGTGCCATTAAAATCCCATTCCTTTTGGATGGCCTCCTCATaGTTCTTGCGGTGGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RLSHSDNVGWVPLKSHSFWMASS*FLRWAV Trigger: CACGGCCCACCGCAAGAAGCATGAGGAGGCCATCCA...AAAGGAATGGGATTTTAATGGCACCCACCCCACGTTATCACTGTGTGATAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR GCA 90 bp | CCTGGCATCTTCTTTCATCTTGGTCAAAATCAGATCCCAAAGGACACCCAGCCTAGCACTGGCAATAAGTaGCTTGCTGGGATGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGIFFHLGQNQIPKDTQPSTGNK*LAGMAG Trigger: GCCTGCCATCCCAGCAAGGCACTTATTGCCAGTGCT...AGGCTGGGTGTCCTTTGGGATCTGATTTTGACCAAGATGAAAGAAGATGCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CCA 90 bp | AGCTCGGAAAGCATGAATCGGCTCCACATCCAGTGCAGCATTTTTCTTGGCCGTACCGCATGTCCAAGATaGTATCTGTGTAGCCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SSESMNRLHIQCSIFLGRTACPR*YLCSPP Trigger: AGGTGGGCTACACAGATACCATCTTGGACATGCGGT...ACGGCCAAGAAAAATGCTGCACTGGATGTGGAGCCGATTCATGCTTTCCGAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184708.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTATGCTGCACACTGTCCAGTTCATCATCCTCATCGCTGTCTTCATCCTCGAAAACTGAAGCCAGCTaGGACTGGCTGTCGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLCCTLSSSSSSSLSSSSKTEAS*DWLSQK Trigger: CTTCTGCGACAGCCAGTCTCAGCTGGCTTCAGTTTT...CGAGGATGAAGACAGCGATGAGGATGATGAACTGGACAGTGTGCAGCATAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184280.8 |
||
| CDS-3UTR GCA 90 bp | GAAAGGGCCTTTAGCACCACCAGGCTCCAGGAAGATGAAAGAGGCCAAGACTCACGTTGCTTCTTATGCTaGACACTGTCCAGTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: ERAFSTTRLQEDERGQDSRCFLC*TLSSSS Trigger: TGATGAACTGGACAGTGTGCAGCATAAGAAGCAACG...TGAGTCTTGGCCTCTTTCATCTTCCTGGAGCCTGGTGGTGCTAAAGGCCCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CCA 90 bp | GAAGGCCTGGCCCCAGAGGCTTGGTTAGTGTTGGGAAGCAAGAGGAATGGACTGTCAGTTTATGATATTTaGCCCTCTCCTGCTTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EGLAPEAWLVLGSKRNGLSVYDI*PSPALV Trigger: CACTAAAGCAGGAGAGGGCCAAATATCATAAACTGA...CAGTCCATTCCTCTTGCTTCCCAACACTAACCAAGCCTCTGGGGCCAGGCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CCA 90 bp | TCACACAGTGATAACGTGGGGTGGGTGCCATTAAAATCCCATTCCTTTATACAGAGTGCCTTGCTGGGATaGCAGGCCACTGCATGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SHSDNVGWVPLKSHSFIQSALLG*QATAWM Trigger: CATCCATGCAGTGGCCTGCCATCCCAGCAAGGCACT...CTGTATAAAGGAATGGGATTTTAATGGCACCCACCCCACGTTATCACTGTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | AGCATGAATCGGCTCCACATCCAGTGCAGCATTTTTCTTGGCCGTAACTGCCTTCAGCTGCATTCCTCTTaGTCTGTTCCTCGATCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SMNRLHIQCSIFLGRNCLQLHSS*SVPRSV Trigger: AACAGATCGAGGAACAGATCAAGAGGAATGCAGCTG...AAGGCAGTTACGGCCAAGAAAAATGCTGCACTGGATGTGGAGCCGATTCATGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184708.8 |
||
| CDS-3UTR TCA 90 bp | AGGACACCCAGCCTGGGCTGTGTCAAACTCAGGACGACAGCTATGTCAGGAGTTGGAAATCAAACTCATTaGTGGCATCTTCTGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RTPSLGCVKLRTTAMSGVGNQTH*WHLLSH Trigger: ATGACTCAGAAGATGCCATCAATGAGTTTGATTTCC...AACTCCTGACATAGCTGTCGTCCTGAGTTTGACACAGCCCAGGCTGGGTGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR GCA 90 bp | AGCCTGGCATCTTCTTTCATCTTGGTCAAAATCAGATCCCAAAGGACACCCAGCTGGGCCGTGATCTCCTaGACACATGTCTTGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLASSFILVKIRSQRTPSWAVIS*THVLLS Trigger: AGACAACAAGACATGTGTGCAGGAGATCACGGCCCA...GCTGGGTGTCCTTTGGGATCTGATTTTGACCAAGATGAAAGAAGATGCCAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CCA 90 bp | CCTGGCATCTTCTTTCATCTTGGTCAAAATCAGATCCCAAAGGACACCCAGCCTACCGCATGTCCAAGATaGTATCTGTGTAGCCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: PGIFFHLGQNQIPKDTQPTACPR*YLCSPP Trigger: AGGTGGGCTACACAGATACCATCTTGGACATGCGGT...AGGCTGGGTGTCCTTTGGGATCTGATTTTGACCAAGATGAAAGAAGATGCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CCA 90 bp | AGACTATCACACAGTGATAACGTGGGGTGGGTGCCATTAAAATCCCATTCCTTTAGGCCACTGCATGGATaGCCTCCTCATGCTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RLSHSDNVGWVPLKSHSFRPLHG*PPHASC Trigger: GCAAGAAGCATGAGGAGGCCATCCATGCAGTGGCCT...AAAGGAATGGGATTTTAATGGCACCCACCCCACGTTATCACTGTGTGATAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | TTGCCAGCTGCATTCCTCTTGATCTGTTCCTCGATCTGTTTTACCAGTAGAGACGTCTTCTTCTCCCCCTaGTTCAGGTCTGTACCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LPAAFLLICSSICFTSRDVFFSP*FRSVPN Trigger: GTTTGGTACAGACCTGAATCAGGGGGAGAAGAAGAC...GTCTCTACTGGTAAAACAGATCGAGGAACAGATCAAGAGGAATGCAGCTGGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184280.8 |
||
| CDS-3UTR GCA 90 bp | TCACACAGTGATAACGTGGGGTGGGTGCCATTAAAATCCCATTCCTTTATACAGCGGCTCCACATCCAGTaGAGCATTTTTCTTGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SHSDNVGWVPLKSHSFIQRLHIQ*SIFLGR Trigger: ACGGCCAAGAAAAATGCTGCACTGGATGTGGAGCCG...CTGTATAAAGGAATGGGATTTTAATGGCACCCACCCCACGTTATCACTGTGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | TCACACAGTGATAACGTGGGGTGGGTGCCATTAAAATCCCATTCCTTTATACAGACAGTCGTGGCTTCCTaGCATCAAGAACACGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: SHSDNVGWVPLKSHSFIQTVVAS*HQEHAI Trigger: AATGGCGTGTTCTTGATGTCAGGAAGCCACGACTGT...CTGTATAAAGGAATGGGATTTTAATGGCACCCACCCCACGTTATCACTGTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR GCA 90 bp | CTAGGAGGGAGCCTGGCATCTTCTTTCATCTTGGTCAAAATCAGATCCCAAAGGCGTTGCTTCTTATGCTaGACACTGTCCAGTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LGGSLASSFILVKIRSQRRCFLC*TLSSSS Trigger: TGATGAACTGGACAGTGTGCAGCATAAGAAGCAACG...CCTTTGGGATCTGATTTTGACCAAGATGAAAGAAGATGCCAGGCTCCCTCCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR GCA 90 bp | CCTGGCATCTTCTTTCATCTTGGTCAAAATCAGATCCCAAAGGACACCCAGCCTACACGTTGCTTCTTATaGTGCACACTGTCCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PGIFFHLGQNQIPKDTQPTRCFL*CTLSSS Trigger: TGAACTGGACAGTGTGCAGCATAAGAAGCAACGTGT...AGGCTGGGTGTCCTTTGGGATCTGATTTTGACCAAGATGAAAGAAGATGCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CCA 90 bp | AGACTATCACACAGTGATAACGTGGGGTGGGTGCCATTAAAATCCCATTCCTTTTCAGCAAGAATTCCCTaGAGTTTGACCCGACGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLSHSDNVGWVPLKSHSFSARIP*SLTRRL Trigger: AAGCCGTCGGGTCAAACTCCAGGGAATTCTTGCTGA...AAAGGAATGGGATTTTAATGGCACCCACCCCACGTTATCACTGTGTGATAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | CCTGGCATCTTCTTTCATCTTGGTCAAAATCAGATCCCAAAGGACACCCAGCCTATTGGAGACTTGTTCTaGCAGATCTGTCTTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGIFFHLGQNQIPKDTQPIGDLF*QICLLL Trigger: GAGAAGAAGACAGATCTGTCAGAACAAGTCTCCAAT...AGGCTGGGTGTCCTTTGGGATCTGATTTTGACCAAGATGAAAGAAGATGCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | AGACTATCACACAGTGATAACGTGGGGTGGGTGCCATTAAAATCCCATTCCTTTCAGCTGCATTCCTCTTaGTCTGTTCCTCGATCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RLSHSDNVGWVPLKSHSFQLHSS*SVPRSV Trigger: AACAGATCGAGGAACAGATCAAGAGGAATGCAGCTG...AAAGGAATGGGATTTTAATGGCACCCACCCCACGTTATCACTGTGTGATAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR TCA 90 bp | AGCCTGGCATCTTCTTTCATCTTGGTCAAAATCAGATCCCAAAGGACACCCAGCGGAAATCAAACTCATTaGTGGCATCTTCTGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLASSFILVKIRSQRTPSGNQTH*WHLLSH Trigger: ATGACTCAGAAGATGCCATCAATGAGTTTGATTTCC...GCTGGGTGTCCTTTGGGATCTGATTTTGACCAAGATGAAAGAAGATGCCAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CCA 90 bp | TCACACAGTGATAACGTGGGGTGGGTGCCATTAAAATCCCATTCCTTTATACAGTCAGTTTATGATATTTaGCCCTCTCCTGCTTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SHSDNVGWVPLKSHSFIQSVYDI*PSPALV Trigger: CACTAAAGCAGGAGAGGGCCAAATATCATAAACTGA...CTGTATAAAGGAATGGGATTTTAATGGCACCCACCCCACGTTATCACTGTGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CAA 90 bp | GGGGCACAGGGCCCACTCCACCCTCTCTCTACATCTCAAGGAGGGCCTGTGGCTCCACCCAGGCGCTCCTaGCCATCTTTGCCAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GAQGPLHPLSTSQGGPVAPPRRS*PSLPAA Trigger: TGCAGCTGGCAAAGATGGCAAGGAGCGCCTGGGTGG...AGCCACAGGCCCTCCTTGAGATGTAGAGAGAGGGTGGAGTGGGCCCTGTGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS CCA 90 bp | CCGGATGCCCCTGTCGTCGTGTGCAGTGATGGTGAGAGGCTGGCTTaGGTGACTCACCACCTGGTTGATCTGTGCTGGGCCACTGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PDAPVVVCSDGERLA*VTHHLVDLCWATAP Trigger: GGGAGCAGTGGCCCAGCACAGATCAACCAGGTGGTGAGTCACCCAAGCCAGCCTCTCACCATCACTGCACACGACGACAGGGGCATCCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184694.2 |
||
| CDS TCA 90 bp | ATGCCCCTGTCGTCGTGTGCAGTGATGGTGAGAGGCTGGCTTGGGTaGCTCACCACCTGGTTGATCTGTGCTGGGCCACTGCTCCCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: MPLSSCAVMVRGWLG*LTTWLICAGPLLPR Trigger: TCGAGGGAGCAGTGGCCCAGCACAGATCAACCAGGTGGTGAGTCACCCAAGCCAGCCTCTCACCATCACTGCACACGACGACAGGGGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184694.2 |
||
| CDS-3UTR CAA 90 bp | CAAGGAGGGCCTGTGGCTAGGACAATGCCCCAGAGGAGTGGAGGCCCTTCCCAGAGAATTCCCTGGAGTTaGACCCGACGGCTTTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QGGPVARTMPQRSGGPSQRIPWS*TRRLSS Trigger: GCTGGAAAGCCGTCGGGTCAAACTCCAGGGAATTCT...CTGGGAAGGGCCTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS GCA 90 bp | GATGGTGAGAGGCTGGCTTGGGTGACTCACCACCTGGTTGATCTGTaGTGGGCCACTGCTCCCTCGAGACTCCAATGTGAGAAGGGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: DGERLAWVTHHLVDL*WATAPSRLQCEKGA Trigger: AGCGCCCTTCTCACATTGGAGTCTCGAGGGAGCAGTGGCCCAGCACAGATCAACCAGGTGGTGAGTCACCCAAGCCAGCCTCTCACCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184694.2 |
||
| CDS CCA 90 bp | GCTAGGGCATCAGCACCAGCACTGGCAATAAGTGCCTTGCTGGGATaGCAGGCCACTGCATGGATGGCCTCCTCATGCTTCTTGCGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ARASAPALAISALLG*QATAWMASSCFLRW Trigger: CCACCGCAAGAAGCATGAGGAGGCCATCCATGCAGTGGCCTGCCATCCCAGCAAGGCACTTATTGCCAGTGCTGGTGCTGATGCCCTAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184694.2 |
||
| CDS-3UTR CAA 90 bp | TCTTCATCCTCGCAGTTCTGCAGGAAGGGTATCTGCTCCAGCACCGAGCCACCCGCATACTCCAGCATCTaGATCCGCCGCACCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSSSQFCRKGICSSTEPPAYSSI*IRRTRS Trigger: GGACCTGGTGCGGCGGATCAAGATGCTGGAGTATGC...GGGTGGCTCGGTGCTGGAGCAGATACCCTTCCTGCAGAACTGCGAGGATGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184280.8 |
||
| CDS-3UTR CAA 90 bp | CATGGTGACTGCCAGCACCGGGCCCCTGTGAGCTCGGAAAGCATGAATCGGCTCCGCTCCTTGCCATCTTaGCCAGCTGCATTCCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HGDCQHRAPVSSESMNRLRSLPS*PAAFLL Trigger: CAAGAGGAATGCAGCTGGCAAAGATGGCAAGGAGCG...GAGCCGATTCATGCTTTCCGAGCTCACAGGGGCCCGGTGCTGGCAGTCACCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184708.8 |
||
| CDS-3UTR CAA 90 bp | CACCGGGCCCCTGTGAGCTCGGAAAGCATGAATCGGCTCCACATCCAGTGCAGCAGAATTCCCTGGAGTTaGACCCGACGGCTTTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HRAPVSSESMNRLHIQCSRIPWS*TRRLSS Trigger: GCTGGAAAGCCGTCGGGTCAAACTCCAGGGAATTCT...GCTGCACTGGATGTGGAGCCGATTCATGCTTTCCGAGCTCACAGGGGCCCGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184708.8 |
||
| CDS-3UTR CAA 90 bp | GGGGCACAGGGCCCACTCCACCCTCTCTCTACATCTCAAGGAGGGCCTGTGGCTGAGCGGAGGGTAAACTaGGGGTTCCATGTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GAQGPLHPLSTSQGGPVAERRVN*GFHVFL Trigger: CAAGAAGACATGGAACCCCAAGTTTACCCTCCGCTC...AGCCACAGGCCCTCCTTGAGATGTAGAGAGAGGGTGGAGTGGGCCCTGTGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CAA 90 bp | CAAGGAGGGCCTGTGGCTAGGACAATGCCCCAGAGGAGTGGAGGCCCTTCCCAGTGCAGGTTCCACAGTTaGAGTGTGCCATCCTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QGGPVARTMPQRSGGPSQCRFHS*SVPSSE Trigger: CTCTGAGGATGGCACACTCAAACTGTGGAACCTGCA...CTGGGAAGGGCCTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS TCA 90 bp | GCAGCCCATCCACATCCCGGAGGTCAGCAAGAATTCCCTGGAGTTTaGCCCGACGGCTTTCCAGCTCATGGGGGTTCCCCTCTGAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: AAHPHPGGQQEFPGV*PDGFPAHGGSPLKY Trigger: GTACTTCAGAGGGGAACCCCCATGAGCTGGAAAGCCGTCGGGTCAAACTCCAGGGAATTCTTGCTGACCTCCGGGATGTGGATGGGCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184708.8 |
||
| CDS-3UTR CAA 90 bp | CTCTGCACAGCCCTTCATCTGATGAATGAGGGAGGGTGGCACTCTAGGAGGGAGGCATACTCCAGCATCTaGATCCGCCGCACCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LCTALHLMNEGGWHSRREAYSSI*IRRTRS Trigger: GGACCTGGTGCGGCGGATCAAGATGCTGGAGTATGC...CTCCCTCCTAGAGTGCCACCCTCCCTCATTCATCAGATGAAGGGCTGTGCAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CAA 90 bp | GGGGCACAGGGCCCACTCCACCCTCTCTCTACATCTCAAGGAGGGCCTGTGGCTCCAGCTGCATTCCTCTaGATCTGTTCCTCGATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GAQGPLHPLSTSQGGPVAPAAFL*ICSSIC Trigger: ACAGATCGAGGAACAGATCAAGAGGAATGCAGCTGG...AGCCACAGGCCCTCCTTGAGATGTAGAGAGAGGGTGGAGTGGGCCCTGTGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CAA 90 bp | CTCTGCACAGCCCTTCATCTGATGAATGAGGGAGGGTGGCACTCTAGGAGGGAGAGGGAACGCACACGCTaGGACCGCATGTCCAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: LCTALHLMNEGGWHSRRERERTR*DRMSKM Trigger: CATCTTGGACATGCGGTCCAAGCGTGTGCGTTCCCT...CTCCCTCCTAGAGTGCCACCCTCCCTCATTCATCAGATGAAGGGCTGTGCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CAA 90 bp | GCTGCCCATGGTGACTGCCAGCACCGGGCCCCTGTGAGCTCGGAAAGCATGAATCCAGCTGCATTCCTCTaGATCTGTTCCTCGATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AAHGDCQHRAPVSSESMNPAAFL*ICSSIC Trigger: ACAGATCGAGGAACAGATCAAGAGGAATGCAGCTGG...ATTCATGCTTTCCGAGCTCACAGGGGCCCGGTGCTGGCAGTCACCATGGGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184708.8 |
||
| CDS-3UTR CAA 90 bp | GGGGTGACTCCTGGGGAAAGGGCCTTTAGCACCACCAGGCTCCAGGAAGATGAACGCTCCTTGCCATCTTaGCCAGCTGCATTCCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GVTPGERAFSTTRLQEDERSLPS*PAAFLL Trigger: CAAGAGGAATGCAGCTGGCAAAGATGGCAAGGAGCG...TTCATCTTCCTGGAGCCTGGTGGTGCTAAAGGCCCTTTCCCCAGGAGTCACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CAA 90 bp | GCTGTCAGACAGATCACAGCTGAGGTCGTTGTCATTGGTGACGGTGAGATCTGCCCACCCAGGCGCTCCTaGCCATCTTTGCCAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: AVRQITAEVVVIGDGEICPPRRS*PSLPAA Trigger: TGCAGCTGGCAAAGATGGCAAGGAGCGCCTGGGTGG...GCAGATCTCACCGTCACCAATGACAACGACCTCAGCTGTGATCTGTCTGACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184708.8 |
||
| CDS-3UTR CAA 90 bp | AGGGCCCACTCCACCCTCTCTCTACATCTCAAGGAGGGCCTGTGGCTAGGACAAAGAATTCCCTGGAGTTaGACCCGACGGCTTTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RAHSTLSLHLKEGLWLGQRIPWS*TRRLSS Trigger: GCTGGAAAGCCGTCGGGTCAAACTCCAGGGAATTCT...TTGTCCTAGCCACAGGCCCTCCTTGAGATGTAGAGAGAGGGTGGAGTGGGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CAA 90 bp | GGGGTGACTCCTGGGGAAAGGGCCTTTAGCACCACCAGGCTCCAGGAAGATGAACTGAGGTCGTTGTCATaGGTGACGGTGAGATCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GVTPGERAFSTTRLQEDELRSLS*VTVRSA Trigger: GGCAGATCTCACCGTCACCAATGACAACGACCTCAG...TTCATCTTCCTGGAGCCTGGTGGTGCTAAAGGCCCTTTCCCCAGGAGTCACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CAA 90 bp | CACAACCCAACTGACAGGCAAGTGGATCATGGAGGTGGGGTGGGTATAGGGGTGAGGTACAGAGGCAGCTaGGACCACTGCTGCTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: HNPTDRQVDHGGGVGIGVRYRGS*DHCCWD Trigger: ATCCCAGCAGCAGTGGTCCAAGCTGCCTCTGTACCT...CACCCCTATACCCACCCCACCTCCATGATCCACTTGCCTGTCAGTTGGGTTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
||
| CDS GCA 90 bp | TTTACCTGTTCGATTGTCCAGGAACCGGATGCCCCTGTCGTCGTGTaGAGTGATGGTGAGAGGCTGGCTTGGGTGACTCACCACCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: FTCSIVQEPDAPVVV*SDGERLAWVTHHLV Trigger: AACCAGGTGGTGAGTCACCCAAGCCAGCCTCTCACCATCACTGCACACGACGACAGGGGCATCCGGTTCCTGGACAATCGAACAGGTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184694.2 |
||
| CDS CCA 90 bp | TTCCAGGTACTGTCGCAGAAGCTGTCGACCCTCCTTCCACACCAATaGGCTGTTCTCCAGTGTGACCGACTCTACAGGGCCATTGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: FQVLSQKLSTLLPHQ*AVLQCDRLYRAIGD Trigger: GTCTCCAATGGCCCTGTAGAGTCGGTCACACTGGAGAACAGCCCATTGGTGTGGAAGGAGGGTCGACAGCTTCTGCGACAGTACCTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184708.8 |
||
| CDS CCA 90 bp | AACGGCCCAGAAGGGAACGCACACGCTTGGACCGCATGTCCAAGATaGTATCTGTGTAGCCCACCTCTTCCAGGTACTGTCGCAGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: NGPEGNAHAWTACPR*YLCSPPLPGTVAEA Trigger: AGCTTCTGCGACAGTACCTGGAAGAGGTGGGCTACACAGATACCATCTTGGACATGCGGTCCAAGCGTGTGCGTTCCCTTCTGGGCCGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184708.8 |
||
| CDS CCA 90 bp | TCAGCAAGAATTCCCTGGAGTTTGACCCGACGGCTTTCCAGCTCATaGGGGTTCCCCTCTGAAGTACAACGTCGAGGATCTGGAGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: SARIPWSLTRRLSSS*GFPSEVQRRGSGDP Trigger: GGGGTCTCCAGATCCTCGACGTTGTACTTCAGAGGGGAACCCCCATGAGCTGGAAAGCCGTCGGGTCAAACTCCAGGGAATTCTTGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184708.8 |
||
| CDS-3UTR CAA 90 bp | GGGGTGACTCCTGGGGAAAGGGCCTTTAGCACCACCAGGCTCCAGGAAGATGAAGAGCGGAGGGTAAACTaGGGGTTCCATGTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GVTPGERAFSTTRLQEDEERRVN*GFHVFL Trigger: CAAGAAGACATGGAACCCCAAGTTTACCCTCCGCTC...TTCATCTTCCTGGAGCCTGGTGGTGCTAAAGGCCCTTTCCCCAGGAGTCACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CAA 90 bp | GAAGGCCTGGCCCCAGAGGCTTGGTTAGTGTTGGGAAGCAAGAGGAATGGACTGTCACAGCTGAGGTCGTaGTCATTGGTGACGGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: EGLAPEAWLVLGSKRNGLSQLRS*SLVTVR Trigger: TCTCACCGTCACCAATGACAACGACCTCAGCTGTGA...CAGTCCATTCCTCTTGCTTCCCAACACTAACCAAGCCTCTGGGGCCAGGCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CAA 90 bp | ACATCTCAAGGAGGGCCTGTGGCTAGGACAATGCCCCAGAGGAGTGGAGGCCCTTCATATGGGTCCATGTaGAGGTCAGGAATCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TSQGGPVARTMPQRSGGPSYGSM*RSGIFQ Trigger: CTGGAAGATTCCTGACCTCAACATGGACCCATATGA...AGGGCCTCCACTCCTCTGGGGCATTGTCCTAGCCACAGGCCCTCCTTGAGATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS TCA 90 bp | GAAGCTGTCGACCCTCCTTCCACACCAATGGGCTGTTCTCCAGTGTaGCCGACTCTACAGGGCCATTGGAGACTTGTTCTGACAGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: EAVDPPSTPMGCSPV*PTLQGHWRLVLTDL Trigger: CAGATCTGTCAGAACAAGTCTCCAATGGCCCTGTAGAGTCGGTCACACTGGAGAACAGCCCATTGGTGTGGAAGGAGGGTCGACAGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184280.8 |
||
| CDS GCA 90 bp | GGCACTAGGGCCTTGGATGGGAGCCTCACACGTTGCTTCTTATGCTaGACACTGTCCAGTTCATCATCCTCATCGCTGTCTTCATCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GTRALDGSLTRCFLC*TLSSSSSSSLSSSS Trigger: CGAGGATGAAGACAGCGATGAGGATGATGAACTGGACAGTGTGCAGCATAAGAAGCAACGTGTGAGGCTCCCATCCAAGGCCCTAGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184708.8 |
||
| CDS CCA 90 bp | AACACGCCATTTGGGTCCACAGCTAGGCAGGTGACTGCATCCAGGTaGGCCACCATGGAATGCACAGATTTACCTGTTCGATTGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NTPFGSTARQVTASR*ATMECTDLPVRLSR Trigger: CCTGGACAATCGAACAGGTAAATCTGTGCATTCCATGGTGGCCCACCTGGATGCAGTCACCTGCCTAGCTGTGGACCCAAATGGCGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184694.2 |
||
| CDS CCA 90 bp | AACGGCCCAGAAGGGAACGCACACGCTTGGACCGCATGTCCAAGATaGTATCTGTGTAGCCCACCTCTTCCAGGTACTTCTATACCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: NGPEGNAHAWTACPR*YLCSPPLPGTSIPE Trigger: CTCAGGTATAGAAGTACCTGGAAGAGGTGGGCTACACAGATACCATCTTGGACATGCGGTCCAAGCGTGTGCGTTCCCTTCTGGGCCGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184280.8 |
||
| CDS GCA 90 bp | TCAGGCACTAGGGCCTTGGATGGGAGCCTCACACGTTGCTTCTTATaGTGCACACTGTCCAGTTCATCATCCTCATCGCTGTCTTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SGTRALDGSLTRCFL*CTLSSSSSSSLSSS Trigger: GGATGAAGACAGCGATGAGGATGATGAACTGGACAGTGTGCAGCATAAGAAGCAACGTGTGAGGCTCCCATCCAAGGCCCTAGTGCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184708.8 |
||
| CDS GCA 90 bp | TCCTCCATTTCAGGCACTAGGGCCTTGGATGGGAGCCTCACACGTTaGTTCTTATGCTGCACACTGTCCAGTTCATCATCCTCATCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSISGTRALDGSLTR*FLCCTLSSSSSSSL Trigger: CAGCGATGAGGATGATGAACTGGACAGTGTGCAGCATAAGAAGCAACGTGTGAGGCTCCCATCCAAGGCCCTAGTGCCTGAAATGGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184708.8 |
||
| CDS-3UTR CAA 90 bp | GGGGTGACTCCTGGGGAAAGGGCCTTTAGCACCACCAGGCTCCAGGAAGATGAATCCTGCACACATGTCTaGTTGTCTAGGCTCCATAAA | + |
|
Preference number: 5 (lower is better) Translates to: GVTPGERAFSTTRLQEDESCTHV*LSRLHK Trigger: TTTATGGAGCCTAGACAACAAGACATGTGTGCAGGA...TTCATCTTCCTGGAGCCTGGTGGTGCTAAAGGCCCTTTCCCCAGGAGTCACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CAA 90 bp | CTAGGAGGGAGCCTGGCATCTTCTTTCATCTTGGTCAAAATCAGATCCCAAAGGAGGGAACGCACACGCTaGGACCGCATGTCCAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: LGGSLASSFILVKIRSQRRERTR*DRMSKM Trigger: CATCTTGGACATGCGGTCCAAGCGTGTGCGTTCCCT...CCTTTGGGATCTGATTTTGACCAAGATGAAAGAAGATGCCAGGCTCCCTCCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CAA 90 bp | AGACTATCACACAGTGATAACGTGGGGTGGGTGCCATTAAAATCCCATTCCTTTCCACCCAGGCGCTCCTaGCCATCTTTGCCAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RLSHSDNVGWVPLKSHSFPPRRS*PSLPAA Trigger: TGCAGCTGGCAAAGATGGCAAGGAGCGCCTGGGTGG...AAAGGAATGGGATTTTAATGGCACCCACCCCACGTTATCACTGTGTGATAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CAA 90 bp | CCAAAGGACACCCAGCCTGGGCTGTGTCAAACTCAGGACGACAGCTATGTCAGGTTCTTGAAAGCGTCTTaGCTGTCAGACAGATCACAG | + |
|
Preference number: 5 (lower is better) Translates to: PKDTQPGLCQTQDDSYVRFLKAS*LSDRSQ Trigger: CTGTGATCTGTCTGACAGCAAAGACGCTTTCAAGAA...CCTGACATAGCTGTCGTCCTGAGTTTGACACAGCCCAGGCTGGGTGTCCTTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CAA 90 bp | AGCCTGGCATCTTCTTTCATCTTGGTCAAAATCAGATCCCAAAGGACACCCAGCAGGTACAGAGGCAGCTaGGACCACTGCTGCTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SLASSFILVKIRSQRTPSRYRGS*DHCCWD Trigger: ATCCCAGCAGCAGTGGTCCAAGCTGCCTCTGTACCT...GCTGGGTGTCCTTTGGGATCTGATTTTGACCAAGATGAAAGAAGATGCCAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CAA 90 bp | TCACACAGTGATAACGTGGGGTGGGTGCCATTAAAATCCCATTCCTTTATACAGGCATACTCCAGCATCTaGATCCGCCGCACCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SHSDNVGWVPLKSHSFIQAYSSI*IRRTRS Trigger: GGACCTGGTGCGGCGGATCAAGATGCTGGAGTATGC...CTGTATAAAGGAATGGGATTTTAATGGCACCCACCCCACGTTATCACTGTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CAA 90 bp | CCTGGCATCTTCTTTCATCTTGGTCAAAATCAGATCCCAAAGGACACCCAGCCTCTGAGGTCGTTGTCATaGGTGACGGTGAGATCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PGIFFHLGQNQIPKDTQPLRSLS*VTVRSA Trigger: GGCAGATCTCACCGTCACCAATGACAACGACCTCAG...AGGCTGGGTGTCCTTTGGGATCTGATTTTGACCAAGATGAAAGAAGATGCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CAA 90 bp | AGGACACCCAGCCTGGGCTGTGTCAAACTCAGGACGACAGCTATGTCAGGAGTTTTCTTGAAAGCGTCTTaGCTGTCAGACAGATCACAG | + |
|
Preference number: 5 (lower is better) Translates to: RTPSLGCVKLRTTAMSGVFLKAS*LSDRSQ Trigger: CTGTGATCTGTCTGACAGCAAAGACGCTTTCAAGAA...AACTCCTGACATAGCTGTCGTCCTGAGTTTGACACAGCCCAGGCTGGGTGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS TCA 90 bp | TATGATATTTGGCCCTCTCCTGCTTTAGTGCATACTCCAGCATCTTaGTCCGCCGCACCAGGTCCGTCTTTAGATTCTCTTGGCCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: YDIWPSPALVHTPAS*SAAPGPSLDSLGLS Trigger: GGAAAGGCCAAGAGAATCTAAAGACGGACCTGGTGCGGCGGATCAAGATGCTGGAGTATGCACTAAAGCAGGAGAGGGCCAAATATCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184280.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGCATCTTCTTTCATCTTGGTCAAAATCAGATCCCAAAGGACACCCAGCCTTCACAGCTGAGGTCGTaGTCATTGGTGACGGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PGIFFHLGQNQIPKDTQPSQLRS*SLVTVR Trigger: TCTCACCGTCACCAATGACAACGACCTCAGCTGTGA...AGGCTGGGTGTCCTTTGGGATCTGATTTTGACCAAGATGAAAGAAGATGCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CAA 90 bp | CTAGGAGGGAGCCTGGCATCTTCTTTCATCTTGGTCAAAATCAGATCCCAAAGGTGCAGGTTCCACAGTTaGAGTGTGCCATCCTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LGGSLASSFILVKIRSQRCRFHS*SVPSSE Trigger: CTCTGAGGATGGCACACTCAAACTGTGGAACCTGCA...CCTTTGGGATCTGATTTTGACCAAGATGAAAGAAGATGCCAGGCTCCCTCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CAA 90 bp | AGACTATCACACAGTGATAACGTGGGGTGGGTGCCATTAAAATCCCATTCCTTTCGCTCCTTGCCATCTTaGCCAGCTGCATTCCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RLSHSDNVGWVPLKSHSFRSLPS*PAAFLL Trigger: CAAGAGGAATGCAGCTGGCAAAGATGGCAAGGAGCG...AAAGGAATGGGATTTTAATGGCACCCACCCCACGTTATCACTGTGTGATAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
||
| CDS-3UTR CAA 90 bp | AGCCTGGCATCTTCTTTCATCTTGGTCAAAATCAGATCCCAAAGGACACCCAGCTGCACACATGTCTTGTaGTCTAGGCTCCATAAACGC | + |
|
Preference number: 5 (lower is better) Translates to: SLASSFILVKIRSQRTPSCTHVL*SRLHKR Trigger: GCGTTTATGGAGCCTAGACAACAAGACATGTGTGCA...GCTGGGTGTCCTTTGGGATCTGATTTTGACCAAGATGAAAGAAGATGCCAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR CAA 90 bp | CACTGGGTGTCTGCATTCCTATCTAGAACACAAATGGCCCTGATCCTTACCTCATGCACACATGTCTTGTaGTCTAGGCTCCATAAACGC | + |
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Preference number: 5 (lower is better) Translates to: HWVSAFLSRTQMALILTSCTHVL*SRLHKR Trigger: GCGTTTATGGAGCCTAGACAACAAGACATGTGTGCA...TGAGGTAAGGATCAGGGCCATTTGTGTTCTAGATAGGAATGCAGACACCCAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
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| CDS-3UTR CAA 90 bp | GTGTCTGCATTCCTATCTAGAACACAAATGGCCCTGATCCTTACCTCAGCCCCATCCTGCACACATGTCTaGTTGTCTAGGCTCCATAAA | + |
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Preference number: 5 (lower is better) Translates to: VSAFLSRTQMALILTSAPSCTHV*LSRLHK Trigger: TTTATGGAGCCTAGACAACAAGACATGTGTGCAGGA...TGGGGCTGAGGTAAGGATCAGGGCCATTTGTGTTCTAGATAGGAATGCAGACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184694.2 |
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| CDS-3UTR CAA 90 bp | TCACACAGTGATAACGTGGGGTGGGTGCCATTAAAATCCCATTCCTTTATACAGCCAGCTGCATTCCTCTaGATCTGTTCCTCGATCTGT | + |
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Preference number: 5 (lower is better) Translates to: SHSDNVGWVPLKSHSFIQPAAFL*ICSSIC Trigger: ACAGATCGAGGAACAGATCAAGAGGAATGCAGCTGG...CTGTATAAAGGAATGGGATTTTAATGGCACCCACCCCACGTTATCACTGTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR CAA 90 bp | AGCCTGGCATCTTCTTTCATCTTGGTCAAAATCAGATCCCAAAGGACACCCAGCTCCTGCACACATGTCTaGTTGTCTAGGCTCCATAAA | + |
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Preference number: 5 (lower is better) Translates to: SLASSFILVKIRSQRTPSSCTHV*LSRLHK Trigger: TTTATGGAGCCTAGACAACAAGACATGTGTGCAGGA...GCTGGGTGTCCTTTGGGATCTGATTTTGACCAAGATGAAAGAAGATGCCAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS-3UTR CAA 90 bp | TCACACAGTGATAACGTGGGGTGGGTGCCATTAAAATCCCATTCCTTTATACAGTGCACACATGTCTTGTaGTCTAGGCTCCATAAACGC | + |
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Preference number: 5 (lower is better) Translates to: SHSDNVGWVPLKSHSFIQCTHVL*SRLHKR Trigger: GCGTTTATGGAGCCTAGACAACAAGACATGTGTGCA...CTGTATAAAGGAATGGGATTTTAATGGCACCCACCCCACGTTATCACTGTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS TCA 72 bp | CCCCTCAACGGGCTCACCGGCCCCATTGAGTTCCAGTaGACGGCCCAGAAGGGAACGCACACGCTTGGACCG | + |
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Preference number: 6 (lower is better) Translates to: PLNGLTGPIEFQ*TAQKGTHTLGP Trigger: CGGTCCAAGCGTGTGCGTTCCCTTCTGGGCCGTTCACTGGAACTCAATGGGGCCGGTGAGCCCGTTGAGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184708.8 |
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| CDS GCA 72 bp | CTGGGATGGCAGGCCACTGCATGGATGGCCTCCTCATaGTTCTTGCGGTGGGCCGTGATCTCCTGCACACAT | + |
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Preference number: 6 (lower is better) Translates to: LGWQATAWMASS*FLRWAVISCTH Trigger: ATGTGTGCAGGAGATCACGGCCCACCGCAAGAAGCATGAGGAGGCCATCCATGCAGTGGCCTGCCATCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184694.2 |
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| CDS CCA 72 bp | GCAATAAGTGCCTTGCTGGGATGGCAGGCCACTGCATaGATGGCCTCCTCATGCTTCTTGCGGTGGGCCGTG | + |
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Preference number: 6 (lower is better) Translates to: AISALLGWQATA*MASSCFLRWAV Trigger: CACGGCCCACCGCAAGAAGCATGAGGAGGCCATCCATGCAGTGGCCTGCCATCCCAGCAAGGCACTTATTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184694.2 |
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| CDS TCA 72 bp | CTCCCCGCCCCCGATAGTGTCCATGATGAAGACGTCTaGGGAGAAGCCAAAGGAACCTTCATGAGGCCGGGG | + |
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Preference number: 6 (lower is better) Translates to: LPAPDSVHDEDV*GEAKGTFMRPG Trigger: CCCCGGCCTCATGAAGGTTCCTTTGGCTTCTCCTCAGACGTCTTCATCATGGACACTATCGGGGGCGGGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019220.16 |
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| CDS GCA 72 bp | TCGATTGTCCAGGAACCGGATGCCCCTGTCGTCGTGTaGAGTGATGGTGAGAGGCTGGCTTGGGTGACTCAC | + |
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Preference number: 6 (lower is better) Translates to: SIVQEPDAPVVV*SDGERLAWVTH Trigger: GTGAGTCACCCAAGCCAGCCTCTCACCATCACTGCACACGACGACAGGGGCATCCGGTTCCTGGACAATCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184694.2 |
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| CDS CCA 72 bp | CTGTCGCAGAAGCTGTCGACCCTCCTTCCACACCAATaGGCTGTTCTCCAGTGTGACCGACTCTACAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: LSQKLSTLLPHQ*AVLQCDRLYRA Trigger: GGCCCTGTAGAGTCGGTCACACTGGAGAACAGCCCATTGGTGTGGAAGGAGGGTCGACAGCTTCTGCGACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184280.8 ENSMUST00000184708.8 |
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| CDS CCA 72 bp | AGCCCATCCACATCCCGGAGGTCAGCAAGAATTCCCTaGAGTTTGACCCGACGGCTTTCCAGCTCATGGGGG | + |
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Preference number: 6 (lower is better) Translates to: SPSTSRRSARIP*SLTRRLSSSWG Trigger: CCCCCATGAGCTGGAAAGCCGTCGGGTCAAACTCCAGGGAATTCTTGCTGACCTCCGGGATGTGGATGGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184708.8 |
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| CDS CAA 72 bp | TCCACATCCCGGAGGTCAGCAAGAATTCCCTGGAGTTaGACCCGACGGCTTTCCAGCTCATGGGGGTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: STSRRSARIPWS*TRRLSSSWGFP Trigger: GGGGAACCCCCATGAGCTGGAAAGCCGTCGGGTCAAACTCCAGGGAATTCTTGCTGACCTCCGGGATGTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184708.8 |
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| CDS CAA 72 bp | TGGCAGGCCACTGCATGGATGGCCTCCTCATGCTTCTaGCGGTGGGCCGTGATCTCCTGCACACATGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: WQATAWMASSCF*RWAVISCTHVL Trigger: CAAGACATGTGTGCAGGAGATCACGGCCCACCGCAAGAAGCATGAGGAGGCCATCCATGCAGTGGCCTGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184694.2 |
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| CDS CAA 90 bp | GGCAGCCCATCCACATCCCGGAGGTCAGCAAGAATTCCCTGGAGTTaGACCCGACGGCTTTCCAGCTCATGGGGGTTCCCCTCTGAAGTA | + |
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Preference number: 6 (lower is better) Translates to: GSPSTSRRSARIPWS*TRRLSSSWGFPSEV Trigger: TACTTCAGAGGGGAACCCCCATGAGCTGGAAAGCCGTCGGGTCAAACTCCAGGGAATTCTTGCTGACCTCCGGGATGTGGATGGGCTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184708.8 |
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| CDS CCA 72 bp | TCAGCACCAGCACTGGCAATAAGTGCCTTGCTGGGATaGCAGGCCACTGCATGGATGGCCTCCTCATGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SAPALAISALLG*QATAWMASSCF Trigger: GAAGCATGAGGAGGCCATCCATGCAGTGGCCTGCCATCCCAGCAAGGCACTTATTGCCAGTGCTGGTGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184694.2 |
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| CDS CAA 90 bp | AAAGCGTCTTTGCTGTCAGACAGATCACAGCTGAGGTCGTTGTCATaGGTGACGGTGAGATCTGCCAAGTCCCCCAGGCTCACCTCCCCG | + |
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Preference number: 6 (lower is better) Translates to: KASLLSDRSQLRSLS*VTVRSAKSPRLTSP Trigger: CGGGGAGGTGAGCCTGGGGGACTTGGCAGATCTCACCGTCACCAATGACAACGACCTCAGCTGTGATCTGTCTGACAGCAAAGACGCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS CAA 90 bp | GCATCCAGGTGGGCCACCATGGAATGCACAGATTTACCTGTTCGATaGTCCAGGAACCGGATGCCCCTGTCGTCGTGTGCAGTGATGGTG | + |
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Preference number: 6 (lower is better) Translates to: ASRWATMECTDLPVR*SRNRMPLSSCAVMV Trigger: CACCATCACTGCACACGACGACAGGGGCATCCGGTTCCTGGACAATCGAACAGGTAAATCTGTGCATTCCATGGTGGCCCACCTGGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184694.2 |
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| CDS TCA 72 bp | TCTGTGCTGGGCCACTGCTCCCTCGAGACTCCAATGTaGGAAGGGCGCTGCCAGCTTCCAGGTCATAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: SVLGHCSLETPM*EGRCQLPGHKE Trigger: TTCTTTATGACCTGGAAGCTGGCAGCGCCCTTCTCACATTGGAGTCTCGAGGGAGCAGTGGCCCAGCACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184694.2 |
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| CDS TCA 72 bp | TCAAGAACACGCCATTTGGGTCCACAGCTAGGCAGGTaGCTGCATCCAGGTGGGCCACCATGGAATGCACAG | + |
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Preference number: 6 (lower is better) Translates to: SRTRHLGPQLGR*LHPGGPPWNAQ Trigger: CTGTGCATTCCATGGTGGCCCACCTGGATGCAGTCACCTGCCTAGCTGTGGACCCAAATGGCGTGTTCTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184694.2 |
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| CDS CCA 72 bp | GTTCCAGTGAACGGCCCAGAAGGGAACGCACACGCTTaGACCGCATGTCCAAGATGGTATCTGTGTAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: VPVNGPEGNAHA*TACPRWYLCSP Trigger: TGGGCTACACAGATACCATCTTGGACATGCGGTCCAAGCGTGTGCGTTCCCTTCTGGGCCGTTCACTGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184280.8 ENSMUST00000184708.8 |
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| CDS TCA 72 bp | GACCCTCCTTCCACACCAATGGGCTGTTCTCCAGTGTaGCCGACTCTACAGGGCCATTGGAGACTTGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: DPPSTPMGCSPV*PTLQGHWRLVL Trigger: CAGAACAAGTCTCCAATGGCCCTGTAGAGTCGGTCACACTGGAGAACAGCCCATTGGTGTGGAAGGAGGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184280.8 ENSMUST00000184708.8 |
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| CDS GCA 72 bp | AGGCAGGTGACTGCATCCAGGTGGGCCACCATGGAATaGACAGATTTACCTGTTCGATTGTCCAGGAACCGG | + |
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Preference number: 6 (lower is better) Translates to: RQVTASRWATME*TDLPVRLSRNR Trigger: CCGGTTCCTGGACAATCGAACAGGTAAATCTGTGCATTCCATGGTGGCCCACCTGGATGCAGTCACCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184694.2 |
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| CDS CCA 72 bp | GAAGGGAACGCACACGCTTGGACCGCATGTCCAAGATaGTATCTGTGTAGCCCACCTCTTCCAGGTACTGTC | + |
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Preference number: 6 (lower is better) Translates to: EGNAHAWTACPR*YLCSPPLPGTV Trigger: GACAGTACCTGGAAGAGGTGGGCTACACAGATACCATCTTGGACATGCGGTCCAAGCGTGTGCGTTCCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184708.8 |
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| CDS CCA 72 bp | ATTCCCTGGAGTTTGACCCGACGGCTTTCCAGCTCATaGGGGTTCCCCTCTGAAGTACAACGTCGAGGATCT | + |
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Preference number: 6 (lower is better) Translates to: IPWSLTRRLSSS*GFPSEVQRRGS Trigger: AGATCCTCGACGTTGTACTTCAGAGGGGAACCCCCATGAGCTGGAAAGCCGTCGGGTCAAACTCCAGGGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184708.8 |
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| CDS CAA 72 bp | TTGCTGTCAGACAGATCACAGCTGAGGTCGTTGTCATaGGTGACGGTGAGATCTGCCAAGTCCCCCAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: LLSDRSQLRSLS*VTVRSAKSPRL Trigger: GAGCCTGGGGGACTTGGCAGATCTCACCGTCACCAATGACAACGACCTCAGCTGTGATCTGTCTGACAGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 |
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| CDS CAA 72 bp | TGGGCCACCATGGAATGCACAGATTTACCTGTTCGATaGTCCAGGAACCGGATGCCCCTGTCGTCGTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: WATMECTDLPVR*SRNRMPLSSCA Trigger: TGCACACGACGACAGGGGCATCCGGTTCCTGGACAATCGAACAGGTAAATCTGTGCATTCCATGGTGGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184694.2 |
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| CDS CCA 72 bp | CTTCATCCTCGTCCTCCATTTCAGGCACTAGGGCCTTaGATGGGAGCCTCACACGTTGCTTCTTATGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: LHPRPPFQALGP*MGASHVASYAA Trigger: TGCAGCATAAGAAGCAACGTGTGAGGCTCCCATCCAAGGCCCTAGTGCCTGAAATGGAGGACGAGGATGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184708.8 |
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| CDS CCA 72 bp | TTTGGGTCCACAGCTAGGCAGGTGACTGCATCCAGGTaGGCCACCATGGAATGCACAGATTTACCTGTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: FGSTARQVTASR*ATMECTDLPVR Trigger: TCGAACAGGTAAATCTGTGCATTCCATGGTGGCCCACCTGGATGCAGTCACCTGCCTAGCTGTGGACCCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184694.2 |
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| CDS CCA 72 bp | GAAGGGAACGCACACGCTTGGACCGCATGTCCAAGATaGTATCTGTGTAGCCCACCTCTTCCAGGTACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: EGNAHAWTACPR*YLCSPPLPGTS Trigger: AGAAGTACCTGGAAGAGGTGGGCTACACAGATACCATCTTGGACATGCGGTCCAAGCGTGTGCGTTCCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184280.8 |
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| CDS CAA 72 bp | TCTTCATCCTCGTCCTCCATTTCAGGCACTAGGGCCTaGGATGGGAGCCTCACACGTTGCTTCTTATGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSSISGTRA*DGSLTRCFLCC Trigger: GCAGCATAAGAAGCAACGTGTGAGGCTCCCATCCAAGGCCCTAGTGCCTGAAATGGAGGACGAGGATGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184708.8 |
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| CDS GCA 72 bp | GCCTTGGATGGGAGCCTCACACGTTGCTTCTTATGCTaGACACTGTCCAGTTCATCATCCTCATCGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ALDGSLTRCFLC*TLSSSSSSSLS Trigger: AGACAGCGATGAGGATGATGAACTGGACAGTGTGCAGCATAAGAAGCAACGTGTGAGGCTCCCATCCAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184708.8 |
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| CDS CCA 72 bp | TTGTTGTCTAGGCTCCATAAACGCAGAGAACAGTCGTaGCTTCCTGACATCAAGAACACGCCATTTGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: LLSRLHKRREQS*LPDIKNTPFGS Trigger: GGACCCAAATGGCGTGTTCTTGATGTCAGGAAGCCACGACTGTTCTCTGCGTTTATGGAGCCTAGACAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019220.16 ENSMUST00000108495.9 ENSMUST00000184694.2 |
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