Pregenerated sensors for STRN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020954Ensembl transcript IDs: ENSMUST00000013130.15, ENSMUST00000169503.4
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGGAATCTGTGGCATTCACTGATGAACATAAGATCACTAAGAGATaGACAAAGCTACTCTTGGAGCTTGCTTCCCCACCAGAGCACCAC | + |
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Preference number: 1 (lower is better) Translates to: RESVAFTDEHKITKR*TKLLLELASPPEHH Trigger: GTGGTGCTCTGGTGGGGAAGCAAGCTCCAAGAGTAGCTTTGTTCATCTCTTAGTGATCTTATGTTCATCAGTGAATGCCACAGATTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| 3UTR CCA 90 bp | TCACTGATGAACATAAGATCACTAAGAGATGAACAAAGCTACTCTTaGAGCTTGCTTCCCCACCAGAGCACCACATTCCTAACCCTAAGG | + |
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Preference number: 1 (lower is better) Translates to: SLMNIRSLRDEQSYS*SLLPHQSTTFLTLR Trigger: CCTTAGGGTTAGGAATGTGGTGCTCTGGTGGGGAAGCAAGCTCCAAGAGTAGCTTTGTTCATCTCTTAGTGATCTTATGTTCATCAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| 3UTR CAA 90 bp | ATGAACATAAGATCACTAAGAGATGAACAAAGCTACTCTTGGAGCTaGCTTCCCCACCAGAGCACCACATTCCTAACCCTAAGGCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: MNIRSLRDEQSYSWS*LPHQSTTFLTLRQH Trigger: GTGCTGCCTTAGGGTTAGGAATGTGGTGCTCTGGTGGGGAAGCAAGCTCCAAGAGTAGCTTTGTTCATCTCTTAGTGATCTTATGTTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| 3UTR-3UTR CCA 90 bp | CTGATGAACATAAGATCACTAAGAGATGAACAAAGCTACTCTTGGAGCTTGCTTATAGGGCACAGATACTaGAGTCCTTTTTCTTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: LMNIRSLRDEQSYSWSLLIGHRY*SPFSFC Trigger: ACAGAAAGAAAAAGGACTCCAGTATCTGTGCCCTAT...AAGCAAGCTCCAAGAGTAGCTTTGTTCATCTCTTAGTGATCTTATGTTCATCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| 3UTR TCA 72 bp | GTGGCATTCACTGATGAACATAAGATCACTAAGAGATaGACAAAGCTACTCTTGGAGCTTGCTTCCCCACCA | + |
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Preference number: 3 (lower is better) Translates to: VAFTDEHKITKR*TKLLLELASPP Trigger: TGGTGGGGAAGCAAGCTCCAAGAGTAGCTTTGTTCATCTCTTAGTGATCTTATGTTCATCAGTGAATGCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| 3UTR CCA 72 bp | AACATAAGATCACTAAGAGATGAACAAAGCTACTCTTaGAGCTTGCTTCCCCACCAGAGCACCACATTCCTA | + |
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Preference number: 3 (lower is better) Translates to: NIRSLRDEQSYS*SLLPHQSTTFL Trigger: TAGGAATGTGGTGCTCTGGTGGGGAAGCAAGCTCCAAGAGTAGCTTTGTTCATCTCTTAGTGATCTTATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR GCA 90 bp | CACCAGAGCACCACATTCCTAACCCTAAGGCAGCACACAGAGTCCAACAAAAAGGGGATCGTGTACTGTTaGGGCCGGGACAGCTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: HQSTTFLTLRQHTESNKKGIVYC*GRDSSG Trigger: CCCGGAGCTGTCCCGGCCGCAACAGTACACGATCCC...CTTTTTGTTGGACTCTGTGTGCTGCCTTAGGGTTAGGAATGTGGTGCTCTGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR GCA 90 bp | AGCACCACATTCCTAACCCTAAGGCAGCACACAGAGTCCAACAAAAAGTCCTTCGGGATCGTGTACTGTTaGGGCCGGGACAGCTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: STTFLTLRQHTESNKKSFGIVYC*GRDSSG Trigger: CCCGGAGCTGTCCCGGCCGCAACAGTACACGATCCC...GAAGGACTTTTTGTTGGACTCTGTGTGCTGCCTTAGGGTTAGGAATGTGGTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CCA 90 bp | CTTCCCCACCAGAGCACCACATTCCTAACCCTAAGGCAGCACACAGAGTCCAACATTCCTGAAGGGATGTaGGGCAGCTCATCATCTCCC | + |
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Preference number: 4 (lower is better) Translates to: LPHQSTTFLTLRQHTESNIPEGM*GSSSSP Trigger: GGGAGATGATGAGCTGCCCCACATCCCTTCAGGAAT...GTTGGACTCTGTGTGCTGCCTTAGGGTTAGGAATGTGGTGCTCTGGTGGGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013130.15 |
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| CDS-3UTR TCA 90 bp | CACACAGAGTCCAACAAAAAGTCCTTCCCCCTAAGAGCAGACTCCACATTGGCTTTCTGTACCATCCCCTaGACTCCGTGCTTCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: HTESNKKSFPLRADSTLAFCTIP*TPCFTS Trigger: GCTGGTGAAGCACGGAGTTCAGGGGATGGTACAGAA...AGCCAATGTGGAGTCTGCTCTTAGGGGGAAGGACTTTTTGTTGGACTCTGTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CCA 90 bp | CTCTTGGAGCTTGCTTCCCCACCAGAGCACCACATTCCTAACCCTAAGGCAGCACTTGCCTCCTCCAGATaGAAACGTTATTGGTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: LLELASPPEHHIPNPKAALASSR*KRYWFS Trigger: GCTGAACCAATAACGTTTCCATCTGGAGGAGGCAAG...TGCTGCCTTAGGGTTAGGAATGTGGTGCTCTGGTGGGGAAGCAAGCTCCAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR GCA 90 bp | TACTCTTGGAGCTTGCTTCCCCACCAGAGCACCACATTCCTAACCCTAAGGCAGAAGAGCATCAGCTCCTaGACTGGCGATATATGCCTT | + |
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Preference number: 4 (lower is better) Translates to: YSWSLLPHQSTTFLTLRQKSISS*TGDICL Trigger: AAGGCATATATCGCCAGTGCAGGAGCTGATGCTCTT...CTGCCTTAGGGTTAGGAATGTGGTGCTCTGGTGGGGAAGCAAGCTCCAAGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CCA 90 bp | CTTGCTTCCCCACCAGAGCACCACATTCCTAACCCTAAGGCAGCACACAGAGTCGAGCCTCCACATCTTTaGTTTCCTCTGATTCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: LASPPEHHIPNPKAAHRVEPPHL*FPLIQR Trigger: CCTTTGAATCAGAGGAAACCAAAGATGTGGAGGCTC...GACTCTGTGTGCTGCCTTAGGGTTAGGAATGTGGTGCTCTGGTGGGGAAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR TCA 90 bp | TCCCCACCAGAGCACCACATTCCTAACCCTAAGGCAGCACACAGAGTCCAACAAACAGGCTCTACAGGATaGAAAGCTAATGCTCTCACA | + |
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Preference number: 4 (lower is better) Translates to: SPPEHHIPNPKAAHRVQQTGSTG*KANALT Trigger: TGTGAGAGCATTAGCTTTTCATCCTGTAGAGCCTGT...TTGTTGGACTCTGTGTGCTGCCTTAGGGTTAGGAATGTGGTGCTCTGGTGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR GCA 90 bp | CACCAGAGCACCACATTCCTAACCCTAAGGCAGCACACAGAGTCCAACAAAAAGTTGACTATTCTGAGGTaGTGGAGGAGCCTCCACATC | + |
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Preference number: 4 (lower is better) Translates to: HQSTTFLTLRQHTESNKKLTILR*WRSLHI Trigger: GATGTGGAGGCTCCTCCAGCACCTCAGAATAGTCAA...CTTTTTGTTGGACTCTGTGTGCTGCCTTAGGGTTAGGAATGTGGTGCTCTGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR GCA 90 bp | CAGAGCACCACATTCCTAACCCTAAGGCAGCACACAGAGTCCAACAAAAAGTCCTTGACTATTCTGAGGTaGTGGAGGAGCCTCCACATC | + |
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Preference number: 4 (lower is better) Translates to: QSTTFLTLRQHTESNKKSLTILR*WRSLHI Trigger: GATGTGGAGGCTCCTCCAGCACCTCAGAATAGTCAA...GGACTTTTTGTTGGACTCTGTGTGCTGCCTTAGGGTTAGGAATGTGGTGCTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CCA 90 bp | CTCTTGGAGCTTGCTTCCCCACCAGAGCACCACATTCCTAACCCTAAGGCAGCAAAAGACGTAACCATATaGGCTGGATCACAGCCTATA | + |
|
Preference number: 4 (lower is better) Translates to: LLELASPPEHHIPNPKAAKDVTI*AGSQPI Trigger: TATAGGCTGTGATCCAGCCCATATGGTTACGTCTTT...TGCTGCCTTAGGGTTAGGAATGTGGTGCTCTGGTGGGGAAGCAAGCTCCAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR TCA 90 bp | GTTCATATCCAGTATAGGGCACAGATACTGGAGTCCTTTTTCTTTCTGTCCCACTTCTGTACCATCCCCTaGACTCCGTGCTTCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: VHIQYRAQILESFFFLSHFCTIP*TPCFTS Trigger: GCTGGTGAAGCACGGAGTTCAGGGGATGGTACAGAA...GTGGGACAGAAAGAAAAAGGACTCCAGTATCTGTGCCCTATACTGGATATGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR TCA 90 bp | AGAGATGAACAAAGCTACTCTTGGAGCTTGCTTCCCCACCAGAGCACCACATTCGGCATATTCCACCACTaGATGGTTGCATCAATGCCA | + |
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Preference number: 4 (lower is better) Translates to: RDEQSYSWSLLPHQSTTFGIFHH*MVASMP Trigger: TGGCATTGATGCAACCATTCAGTGGTGGAATATGCC...GAATGTGGTGCTCTGGTGGGGAAGCAAGCTCCAAGAGTAGCTTTGTTCATCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR TCA 90 bp | CACACAGAGTCCAACAAAAAGTCCTTCCCCCTAAGAGCAGACTCCACATTGGCTCAGACTGCATCTGTATaGGCAACTAAAGTGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: HTESNKKSFPLRADSTLAQTASV*ATKVPA Trigger: AGCTGGCACTTTAGTTGCTCATACAGATGCAGTCTG...AGCCAATGTGGAGTCTGCTCTTAGGGGGAAGGACTTTTTGTTGGACTCTGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR TCA 90 bp | CACCAGAGCACCACATTCCTAACCCTAAGGCAGCACACAGAGTCCAACAAAAAGCAGACTGCATCTGTATaGGCAACTAAAGTGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: HQSTTFLTLRQHTESNKKQTASV*ATKVPA Trigger: AGCTGGCACTTTAGTTGCTCATACAGATGCAGTCTG...CTTTTTGTTGGACTCTGTGTGCTGCCTTAGGGTTAGGAATGTGGTGCTCTGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR TCA 90 bp | CTTGCTTCCCCACCAGAGCACCACATTCCTAACCCTAAGGCAGCACACAGAGTCATGTGTCTGTCTTCATaGGCAGTTATTGTAACAGGA | + |
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Preference number: 4 (lower is better) Translates to: LASPPEHHIPNPKAAHRVMCLSS*AVIVTG Trigger: TCCTGTTACAATAACTGCTCATGAAGACAGACACAT...GACTCTGTGTGCTGCCTTAGGGTTAGGAATGTGGTGCTCTGGTGGGGAAGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR GCA 90 bp | CACACAGAGTCCAACAAAAAGTCCTTCCCCCTAAGAGCAGACTCCACATTGGCTAAGAGCATCAGCTCCTaGACTGGCGATATATGCCTT | + |
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Preference number: 4 (lower is better) Translates to: HTESNKKSFPLRADSTLAKSISS*TGDICL Trigger: AAGGCATATATCGCCAGTGCAGGAGCTGATGCTCTT...AGCCAATGTGGAGTCTGCTCTTAGGGGGAAGGACTTTTTGTTGGACTCTGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CCA 90 bp | CTAAGAGATGAACAAAGCTACTCTTGGAGCTTGCTTCCCCACCAGAGCACCACAACTATTCTGAGGTGCTaGAGGAGCCTCCACATCTTT | + |
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Preference number: 4 (lower is better) Translates to: LRDEQSYSWSLLPHQSTTTILRC*RSLHIF Trigger: AAAGATGTGGAGGCTCCTCCAGCACCTCAGAATAGT...TGTGGTGCTCTGGTGGGGAAGCAAGCTCCAAGAGTAGCTTTGTTCATCTCTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CCA 90 bp | TACTCTTGGAGCTTGCTTCCCCACCAGAGCACCACATTCCTAACCCTAAGGCAGTTACTTATTAGCCCCTaGTCTACATCCCAAACCTCA | + |
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Preference number: 4 (lower is better) Translates to: YSWSLLPHQSTTFLTLRQLLISP*STSQTS Trigger: TGAGGTTTGGGATGTAGACCAGGGGCTAATAAGTAA...CTGCCTTAGGGTTAGGAATGTGGTGCTCTGGTGGGGAAGCAAGCTCCAAGAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013130.15 |
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| CDS-3UTR CCA 90 bp | TGTAGTGTCATGTCAGGAACCTTCATGATGGCAGTGATGCAGACCCCCTTTCTGCTTGCCTCCTCCAGATaGAAACGTTATTGGTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: CSVMSGTFMMAVMQTPFLLASSR*KRYWFS Trigger: GCTGAACCAATAACGTTTCCATCTGGAGGAGGCAAG...CAGAAAGGGGGTCTGCATCACTGCCATCATGAAGGTTCCTGACATGACACTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CCA 90 bp | ATCACATGTAGTGTCATGTCAGGAACCTTCATGATGGCAGTGATGCAGACCCCCCATCAGCTCCTGCACTaGCGATATATGCCTTTGATG | + |
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Preference number: 4 (lower is better) Translates to: ITCSVMSGTFMMAVMQTPHQLLH*RYMPLM Trigger: CATCAAAGGCATATATCGCCAGTGCAGGAGCTGATG...GGGGGTCTGCATCACTGCCATCATGAAGGTTCCTGACATGACACTACATGTGAT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CCA 90 bp | TACTCTTGGAGCTTGCTTCCCCACCAGAGCACCACATTCCTAACCCTAAGGCAGAGATGGAAACGTTATTaGTTCAGCCCATTCTGTACC | + |
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Preference number: 4 (lower is better) Translates to: YSWSLLPHQSTTFLTLRQRWKRY*FSPFCT Trigger: GGTACAGAATGGGCTGAACCAATAACGTTTCCATCT...CTGCCTTAGGGTTAGGAATGTGGTGCTCTGGTGGGGAAGCAAGCTCCAAGAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169503.4 |
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| CDS-3UTR TCA 90 bp | TCCCCACCAGAGCACCACATTCCTAACCCTAAGGCAGCACACAGAGTCCAACAAATCTTTGGTTTCCTCTaGTTCAAAGGTGGGCATTTT | + |
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Preference number: 4 (lower is better) Translates to: SPPEHHIPNPKAAHRVQQIFGFL*FKGGHF Trigger: AAAATGCCCACCTTTGAATCAGAGGAAACCAAAGAT...TTGTTGGACTCTGTGTGCTGCCTTAGGGTTAGGAATGTGGTGCTCTGGTGGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR TCA 90 bp | ATCACATGTAGTGTCATGTCAGGAACCTTCATGATGGCAGTGATGCAGACCCCCGAAGCTGACCTAGACTaGTTAATGATTCCTGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: ITCSVMSGTFMMAVMQTPEADLD*LMIPEG Trigger: CCCTTCAGGAATCATTAATCAGTCTAGGTCAGCTTC...GGGGGTCTGCATCACTGCCATCATGAAGGTTCCTGACATGACACTACATGTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013130.15 |
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| CDS-3UTR TCA 90 bp | ATCACATGTAGTGTCATGTCAGGAACCTTCATGATGGCAGTGATGCAGACCCCCGCTCTTGCACCTTCATaGTCAGCCATTCTAGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: ITCSVMSGTFMMAVMQTPALAPS*SAILVE Trigger: TTCTACTAGAATGGCTGATCATGAAGGTGCAAGAGC...GGGGGTCTGCATCACTGCCATCATGAAGGTTCCTGACATGACACTACATGTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013130.15 |
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| CDS-3UTR TCA 90 bp | TGTAGTGTCATGTCAGGAACCTTCATGATGGCAGTGATGCAGACCCCCTTTCTGAGAACCCATAATAAATaGCTTGCCTCCTCCAGATGG | + |
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Preference number: 4 (lower is better) Translates to: CSVMSGTFMMAVMQTPFLRTHNK*LASSRW Trigger: CCATCTGGAGGAGGCAAGTCATTTATTATGGGTTCT...CAGAAAGGGGGTCTGCATCACTGCCATCATGAAGGTTCCTGACATGACACTACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR GCA 90 bp | CACACAGAGTCCAACAAAAAGTCCTTCCCCCTAAGAGCAGACTCCACATTGGCTGCAGGAACTGTCTTTTaGAGGTTCCAAAGTTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: HTESNKKSFPLRADSTLAAGTVF*RFQSFR Trigger: CCTGAAACTTTGGAACCTGCAAAAGACAGTTCCTGC...AGCCAATGTGGAGTCTGCTCTTAGGGGGAAGGACTTTTTGTTGGACTCTGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR GCA 90 bp | CAGAGCACCACATTCCTAACCCTAAGGCAGCACACAGAGTCCAACAAAAAGTCCCCACCACTGAATGGTTaGATCAATGCCACCACTAAA | + |
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Preference number: 4 (lower is better) Translates to: QSTTFLTLRQHTESNKKSPPLNG*INATTK Trigger: TTTAGTGGTGGCATTGATGCAACCATTCAGTGGTGG...GGACTTTTTGTTGGACTCTGTGTGCTGCCTTAGGGTTAGGAATGTGGTGCTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CCA 90 bp | GAGATGAACAAAGCTACTCTTGGAGCTTGCTTCCCCACCAGAGCACCACATTCCCGTAACCATATGGGCTaGATCACAGCCTATAAAATC | + |
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Preference number: 4 (lower is better) Translates to: EMNKATLGACFPTRAPHSRNHMG*ITAYKI Trigger: GATTTTATAGGCTGTGATCCAGCCCATATGGTTACG...GGAATGTGGTGCTCTGGTGGGGAAGCAAGCTCCAAGAGTAGCTTTGTTCATCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CCA 90 bp | CAGATCACATGTAGTGTCATGTCAGGAACCTTCATGATGGCAGTGATGCAGACCCATCAGCTCCTGCACTaGCGATATATGCCTTTGATG | + |
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Preference number: 4 (lower is better) Translates to: QITCSVMSGTFMMAVMQTHQLLH*RYMPLM Trigger: CATCAAAGGCATATATCGCCAGTGCAGGAGCTGATG...GGTCTGCATCACTGCCATCATGAAGGTTCCTGACATGACACTACATGTGATCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR TCA 90 bp | GAGATGAACAAAGCTACTCTTGGAGCTTGCTTCCCCACCAGAGCACCACATTCCGTGTATCCTACTTCCTaGAGATACTGTCTTAATAGC | + |
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Preference number: 4 (lower is better) Translates to: EMNKATLGACFPTRAPHSVYPTS*RYCLNS Trigger: GCTATTAAGACAGTATCTTCAGGAAGTAGGATACAC...GGAATGTGGTGCTCTGGTGGGGAAGCAAGCTCCAAGAGTAGCTTTGTTCATCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR TCA 90 bp | CAGAGCACCACATTCCTAACCCTAAGGCAGCACACAGAGTCCAACAAAAAGTCCGTAACAGCATCCAAATaGGCTACCATAGAATGGATC | + |
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Preference number: 4 (lower is better) Translates to: QSTTFLTLRQHTESNKKSVTASK*ATIEWI Trigger: GATCCATTCTATGGTAGCTCATTTGGATGCTGTTAC...GGACTTTTTGTTGGACTCTGTGTGCTGCCTTAGGGTTAGGAATGTGGTGCTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR GCA 90 bp | GAACAAAGCTACTCTTGGAGCTTGCTTCCCCACCAGAGCACCACATTCCTAACCCTTTTCCTTCTGGGATaGCCTCAATCATGTCATTTT | + |
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Preference number: 4 (lower is better) Translates to: EQSYSWSLLPHQSTTFLTLFLLG*PQSCHF Trigger: AAAATGACATGATTGAGGGCATCCCAGAAGGAAAAG...GGTTAGGAATGTGGTGCTCTGGTGGGGAAGCAAGCTCCAAGAGTAGCTTTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR GCA 90 bp | ATCACATGTAGTGTCATGTCAGGAACCTTCATGATGGCAGTGATGCAGACCCCCGTCGAATTCTTTCAGTaGTTCCTCAGTATCTGGATC | + |
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Preference number: 4 (lower is better) Translates to: ITCSVMSGTFMMAVMQTPVEFFQ*FLSIWI Trigger: GATCCAGATACTGAGGAAGCACTGAAAGAATTCGAC...GGGGGTCTGCATCACTGCCATCATGAAGGTTCCTGACATGACACTACATGTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR GCA 90 bp | TCAGTTCATATCCAGTATAGGGCACAGATACTGGAGTCCTTTTTCTTTCTGTCCTGTTACCGTCAAGTCTaGAAGGTCTCCAAGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SVHIQYRAQILESFFFLSCYRQV*KVSKAQ Trigger: CTGGGCCTTGGAGACCTTGCAGACTTGACGGTAACA...GGACAGAAAGAAAAAGGACTCCAGTATCTGTGCCCTATACTGGATATGAACTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CCA 90 bp | GTGATTCCCAATTTCTGCCTGCCCCAATCACCAGGCAGATCACATGTAGTGTCATTTGTCTTTTCCTTCTaGGATGCCCTCAATCATGTC | + |
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Preference number: 4 (lower is better) Translates to: VIPNFCLPQSPGRSHVVSFVFSF*DALNHV Trigger: GACATGATTGAGGGCATCCCAGAAGGAAAAGACAAA...TGACACTACATGTGATCTGCCTGGTGATTGGGGCAGGCAGAAATTGGGAATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CCA 90 bp | CTTGCTTCCCCACCAGAGCACCACATTCCTAACCCTAAGGCAGCACACAGAGTCGAAAGGCATCTTTATTaGCAGGCAAATCATAACTAT | + |
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Preference number: 4 (lower is better) Translates to: LASPPEHHIPNPKAAHRVERHLY*QANHNY Trigger: ATAGTTATGATTTGCCTGCCAATAAAGATGCCTTTC...GACTCTGTGTGCTGCCTTAGGGTTAGGAATGTGGTGCTCTGGTGGGGAAGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CCA 90 bp | CACCAGAGCACCACATTCCTAACCCTAAGGCAGCACACAGAGTCCAACAAAAAGAAGAGGCACTCTTTTTaGCAGGAACTGTCTTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: HQSTTFLTLRQHTESNKKKRHSF*QELSFA Trigger: TGCAAAAGACAGTTCCTGCCAAAAAGAGTGCCTCTT...CTTTTTGTTGGACTCTGTGTGCTGCCTTAGGGTTAGGAATGTGGTGCTCTGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CCA 90 bp | CAGAGCACCACATTCCTAACCCTAAGGCAGCACACAGAGTCCAACAAAAAGTCCCGTAACCATATGGGCTaGATCACAGCCTATAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: QSTTFLTLRQHTESNKKSRNHMG*ITAYKI Trigger: GATTTTATAGGCTGTGATCCAGCCCATATGGTTACG...GGACTTTTTGTTGGACTCTGTGTGCTGCCTTAGGGTTAGGAATGTGGTGCTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS-3UTR CCA 90 bp | GTGATTCCCAATTTCTGCCTGCCCCAATCACCAGGCAGATCACATGTAGTGTCAAAAGACGTAACCATATaGGCTGGATCACAGCCTATA | + |
|
Preference number: 4 (lower is better) Translates to: VIPNFCLPQSPGRSHVVSKDVTI*AGSQPI Trigger: TATAGGCTGTGATCCAGCCCATATGGTTACGTCTTT...TGACACTACATGTGATCTGCCTGGTGATTGGGGCAGGCAGAAATTGGGAATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS-3UTR TCA 90 bp | GTTCATATCCAGTATAGGGCACAGATACTGGAGTCCTTTTTCTTTCTGTCCCACGGCATATTCCACCACTaGATGGTTGCATCAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VHIQYRAQILESFFFLSHGIFHH*MVASMP Trigger: TGGCATTGATGCAACCATTCAGTGGTGGAATATGCC...GTGGGACAGAAAGAAAAAGGACTCCAGTATCTGTGCCCTATACTGGATATGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS-3UTR GCA 90 bp | CTAAGAGATGAACAAAGCTACTCTTGGAGCTTGCTTCCCCACCAGAGCACCACACTTTTCCTTCTGGGATaGCCTCAATCATGTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRDEQSYSWSLLPHQSTTLFLLG*PQSCHF Trigger: AAAATGACATGATTGAGGGCATCCCAGAAGGAAAAG...TGTGGTGCTCTGGTGGGGAAGCAAGCTCCAAGAGTAGCTTTGTTCATCTCTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS-3UTR GCA 90 bp | TACTCTTGGAGCTTGCTTCCCCACCAGAGCACCACATTCCTAACCCTAAGGCAGTCATTACCTATTTTGTaGTTATGGATCCGAAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: YSWSLLPHQSTTFLTLRQSLPIL*LWIRSL Trigger: CAAACTTCGGATCCATAAGCACAAAATAGGTAATGA...CTGCCTTAGGGTTAGGAATGTGGTGCTCTGGTGGGGAAGCAAGCTCCAAGAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS-3UTR GCA 90 bp | AGCACCACATTCCTAACCCTAAGGCAGCACACAGAGTCCAACAAAAAGTCCTTCGTCGAATTCTTTCAGTaGTTCCTCAGTATCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: STTFLTLRQHTESNKKSFVEFFQ*FLSIWI Trigger: GATCCAGATACTGAGGAAGCACTGAAAGAATTCGAC...GAAGGACTTTTTGTTGGACTCTGTGTGCTGCCTTAGGGTTAGGAATGTGGTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CCA 90 bp | CAGATCACATGTAGTGTCATGTCAGGAACCTTCATGATGGCAGTGATGCAGACCAGATGGAAACGTTATTaGTTCAGCTTCCTCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QITCSVMSGTFMMAVMQTRWKRY*FSFLCS Trigger: AGAGCAGAGGAAGCTGAACCAATAACGTTTCCATCT...GGTCTGCATCACTGCCATCATGAAGGTTCCTGACATGACACTACATGTGATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013130.15 |
||
| CDS-3UTR TCA 90 bp | ACCAGGCAGATCACATGTAGTGTCATGTCAGGAACCTTCATGATGGCAGTGATGATCTTTGGTTTCCTCTaGTTCAAAGGTGGGCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: TRQITCSVMSGTFMMAVMIFGFL*FKGGHF Trigger: AAAATGCCCACCTTTGAATCAGAGGAAACCAAAGAT...CATCACTGCCATCATGAAGGTTCCTGACATGACACTACATGTGATCTGCCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS-3UTR TCA 90 bp | GTTCATATCCAGTATAGGGCACAGATACTGGAGTCCTTTTTCTTTCTGTCCCACACAGGCTCTACAGGATaGAAAGCTAATGCTCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: VHIQYRAQILESFFFLSHTGSTG*KANALT Trigger: TGTGAGAGCATTAGCTTTTCATCCTGTAGAGCCTGT...GTGGGACAGAAAGAAAAAGGACTCCAGTATCTGTGCCCTATACTGGATATGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS-3UTR TCA 90 bp | AGCACCACATTCCTAACCCTAAGGCAGCACACAGAGTCCAACAAAAAGTCCTTCATGTGTCTGTCTTCATaGGCAGTTATTGTAACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: STTFLTLRQHTESNKKSFMCLSS*AVIVTG Trigger: TCCTGTTACAATAACTGCTCATGAAGACAGACACAT...GAAGGACTTTTTGTTGGACTCTGTGTGCTGCCTTAGGGTTAGGAATGTGGTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS-3UTR GCA 90 bp | GAACAAAGCTACTCTTGGAGCTTGCTTCCCCACCAGAGCACCACATTCCTAACCTCATTACCTATTTTGTaGTTATGGATCCGAAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: EQSYSWSLLPHQSTTFLTSLPIL*LWIRSL Trigger: CAAACTTCGGATCCATAAGCACAAAATAGGTAATGA...GGTTAGGAATGTGGTGCTCTGGTGGGGAAGCAAGCTCCAAGAGTAGCTTTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR GCA 90 bp | GTTCATATCCAGTATAGGGCACAGATACTGGAGTCCTTTTTCTTTCTGTCCCACCCACCACTGAATGGTTaGATCAATGCCACCACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VHIQYRAQILESFFFLSHPPLNG*INATTK Trigger: TTTAGTGGTGGCATTGATGCAACCATTCAGTGGTGG...GTGGGACAGAAAGAAAAAGGACTCCAGTATCTGTGCCCTATACTGGATATGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS-3UTR CCA 90 bp | GAACAAAGCTACTCTTGGAGCTTGCTTCCCCACCAGAGCACCACATTCCTAACCATTTTCAAATCACCTTaGTTCAGTTCTGTGCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: EQSYSWSLLPHQSTTFLTIFKSP*FSSVPY Trigger: ATATGGCACAGAACTGAACCAAGGTGATTTGAAAAT...GGTTAGGAATGTGGTGCTCTGGTGGGGAAGCAAGCTCCAAGAGTAGCTTTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CCA 90 bp | GTTCATATCCAGTATAGGGCACAGATACTGGAGTCCTTTTTCTTTCTGTCCCACTATTCCACCACTGAATaGTTGCATCAATGCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: VHIQYRAQILESFFFLSHYSTTE*LHQCHH Trigger: GTGGTGGCATTGATGCAACCATTCAGTGGTGGAATA...GTGGGACAGAAAGAAAAAGGACTCCAGTATCTGTGCCCTATACTGGATATGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS-3UTR TCA 90 bp | CAGATCACATGTAGTGTCATGTCAGGAACCTTCATGATGGCAGTGATGCAGACCCATTCTAGTAGAAGCTaGCCTAGACTGATTAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: QITCSVMSGTFMMAVMQTHSSRS*PRLIND Trigger: ATCATTAATCAGTCTAGGTCAGCTTCTACTAGAATG...GGTCTGCATCACTGCCATCATGAAGGTTCCTGACATGACACTACATGTGATCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013130.15 |
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| CDS-3UTR TCA 90 bp | CAGATCACATGTAGTGTCATGTCAGGAACCTTCATGATGGCAGTGATGCAGACCGCCTATAAAATCAACTaGTGTAGGTATTCCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QITCSVMSGTFMMAVMQTAYKIN*CRYSMF Trigger: GAACATGGAATACCTACATCAGTTGATTTTATAGGC...GGTCTGCATCACTGCCATCATGAAGGTTCCTGACATGACACTACATGTGATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS-3UTR GCA 90 bp | AGCACCACATTCCTAACCCTAAGGCAGCACACAGAGTCCAACAAAAAGTCCTTCATTTCTTGTCCTTTTTaGTTAGGAGATTCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: STTFLTLRQHTESNKKSFISCPF*LGDSPP Trigger: TGGTGGTGAATCTCCTAAGCAAAAAGGACAAGAAAT...GAAGGACTTTTTGTTGGACTCTGTGTGCTGCCTTAGGGTTAGGAATGTGGTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR GCA 90 bp | ATGAACATAAGATCACTAAGAGATGAACAAAGCTACTCTTGGAGCTTGCTTCCCTGGTTCAGCTTCCTCTaGTCTTGCACCTTCATGATC | + |
|
Preference number: 4 (lower is better) Translates to: MNIRSLRDEQSYSWSLLPWFSFL*SCTFMI Trigger: GATCATGAAGGTGCAAGAGCAGAGGAAGCTGAACCA...GGGAAGCAAGCTCCAAGAGTAGCTTTGTTCATCTCTTAGTGATCTTATGTTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013130.15 |
||
| CDS-3UTR CCA 90 bp | TGTAGTGTCATGTCAGGAACCTTCATGATGGCAGTGATGCAGACCCCCTTTCTGCCTATTTTGTGCTTATaGATCCGAAGTTTGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CSVMSGTFMMAVMQTPFLPILCL*IRSLSF Trigger: AAAAGACAAACTTCGGATCCATAAGCACAAAATAGG...CAGAAAGGGGGTCTGCATCACTGCCATCATGAAGGTTCCTGACATGACACTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CCA 90 bp | AGAGATGAACAAAGCTACTCTTGGAGCTTGCTTCCCCACCAGAGCACCACATTCGAAAGGCATCTTTATTaGCAGGCAAATCATAACTAT | + |
|
Preference number: 4 (lower is better) Translates to: RDEQSYSWSLLPHQSTTFERHLY*QANHNY Trigger: ATAGTTATGATTTGCCTGCCAATAAAGATGCCTTTC...GAATGTGGTGCTCTGGTGGGGAAGCAAGCTCCAAGAGTAGCTTTGTTCATCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS-3UTR TCA 90 bp | AAAAACAAAAACCGCTCAGTTCATATCCAGTATAGGGCACAGATACTGGAGTCCGTAACAGCATCCAAATaGGCTACCATAGAATGGATC | + |
|
Preference number: 4 (lower is better) Translates to: KNKNRSVHIQYRAQILESVTASK*ATIEWI Trigger: GATCCATTCTATGGTAGCTCATTTGGATGCTGTTAC...GGACTCCAGTATCTGTGCCCTATACTGGATATGAACTGAGCGGTTTTTGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CCA 90 bp | CTGATGAACATAAGATCACTAAGAGATGAACAAAGCTACTCTTGGAGCTTGCTTACTATTCTGAGGTGCTaGAGGAGCCTCCACATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LMNIRSLRDEQSYSWSLLTILRC*RSLHIF Trigger: AAAGATGTGGAGGCTCCTCCAGCACCTCAGAATAGT...AAGCAAGCTCCAAGAGTAGCTTTGTTCATCTCTTAGTGATCTTATGTTCATCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CCA 90 bp | AAAAACAAAAACCGCTCAGTTCATATCCAGTATAGGGCACAGATACTGGAGTCCTTTGTCTTTTCCTTCTaGGATGCCCTCAATCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: KNKNRSVHIQYRAQILESFVFSF*DALNHV Trigger: GACATGATTGAGGGCATCCCAGAAGGAAAAGACAAA...GGACTCCAGTATCTGTGCCCTATACTGGATATGAACTGAGCGGTTTTTGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CCA 90 bp | AAAAACAAAAACCGCTCAGTTCATATCCAGTATAGGGCACAGATACTGGAGTCCAAGAGGCACTCTTTTTaGCAGGAACTGTCTTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KNKNRSVHIQYRAQILESKRHSF*QELSFA Trigger: TGCAAAAGACAGTTCCTGCCAAAAAGAGTGCCTCTT...GGACTCCAGTATCTGTGCCCTATACTGGATATGAACTGAGCGGTTTTTGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR TCA 90 bp | TCAGTTCATATCCAGTATAGGGCACAGATACTGGAGTCCTTTTTCTTTCTGTCCGTGTATCCTACTTCCTaGAGATACTGTCTTAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SVHIQYRAQILESFFFLSVYPTS*RYCLNS Trigger: GCTATTAAGACAGTATCTTCAGGAAGTAGGATACAC...GGACAGAAAGAAAAAGGACTCCAGTATCTGTGCCCTATACTGGATATGAACTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR TCA 90 bp | CTGATGAACATAAGATCACTAAGAGATGAACAAAGCTACTCTTGGAGCTTGCTTAGAACCCATAATAAATaGCTTGCCTCCTCCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LMNIRSLRDEQSYSWSLLRTHNK*LASSRW Trigger: CCATCTGGAGGAGGCAAGTCATTTATTATGGGTTCT...AAGCAAGCTCCAAGAGTAGCTTTGTTCATCTCTTAGTGATCTTATGTTCATCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR TCA 90 bp | ACAAAAACCGCTCAGTTCATATCCAGTATAGGGCACAGATACTGGAGTCCTTTTCTCACACCATCAAAATaGCTACGTAGTGTGTATTTG | + |
|
Preference number: 4 (lower is better) Translates to: TKTAQFISSIGHRYWSPFLTPSK*LRSVYL Trigger: CAAATACACACTACGTAGTCATTTTGATGGTGTGAG...AAAAGGACTCCAGTATCTGTGCCCTATACTGGATATGAACTGAGCGGTTTTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR GCA 90 bp | CTGATGAACATAAGATCACTAAGAGATGAACAAAGCTACTCTTGGAGCTTGCTTGCAGGAACTGTCTTTTaGAGGTTCCAAAGTTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LMNIRSLRDEQSYSWSLLAGTVF*RFQSFR Trigger: CCTGAAACTTTGGAACCTGCAAAAGACAGTTCCTGC...AAGCAAGCTCCAAGAGTAGCTTTGTTCATCTCTTAGTGATCTTATGTTCATCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR GCA 90 bp | ACAAAAACCGCTCAGTTCATATCCAGTATAGGGCACAGATACTGGAGTCCTTTTTGTCTCCATTGTAAGTaGAAACACATGGCAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TKTAQFISSIGHRYWSPFCLHCK*KHMAAF Trigger: AAAAGCTGCCATGTGTTTGCACTTACAATGGAGACA...AAAAGGACTCCAGTATCTGTGCCCTATACTGGATATGAACTGAGCGGTTTTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CCA 90 bp | ACAAAAACCGCTCAGTTCATATCCAGTATAGGGCACAGATACTGGAGTCCTTTTCCTCTGATTCAAAGGTaGGCATTTTCAAATCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: TKTAQFISSIGHRYWSPFPLIQR*AFSNHL Trigger: AAGGTGATTTGAAAATGCCCACCTTTGAATCAGAGG...AAAAGGACTCCAGTATCTGTGCCCTATACTGGATATGAACTGAGCGGTTTTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CCA 90 bp | AAAAACAAAAACCGCTCAGTTCATATCCAGTATAGGGCACAGATACTGGAGTCCCCTCTGATTCAAAGGTaGGCATTTTCAAATCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: KNKNRSVHIQYRAQILESPLIQR*AFSNHL Trigger: AAGGTGATTTGAAAATGCCCACCTTTGAATCAGAGG...GGACTCCAGTATCTGTGCCCTATACTGGATATGAACTGAGCGGTTTTTGTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CCA 90 bp | CATTCACTGATGAACATAAGATCACTAAGAGATGAACAAAGCTACTCTTGGAGCTATTCCACCACTGAATaGTTGCATCAATGCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: HSLMNIRSLRDEQSYSWSYSTTE*LHQCHH Trigger: GTGGTGGCATTGATGCAACCATTCAGTGGTGGAATA...GCTCCAAGAGTAGCTTTGTTCATCTCTTAGTGATCTTATGTTCATCAGTGAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS-3UTR TCA 90 bp | CTGATGAACATAAGATCACTAAGAGATGAACAAAGCTACTCTTGGAGCTTGCTTACAGGAAGTGTAGGGTaGCTTACTACTCTGTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: LMNIRSLRDEQSYSWSLLTGSVG*LTTLLM Trigger: CATTAACAGAGTAGTAAGTCACCCTACACTTCCTGT...AAGCAAGCTCCAAGAGTAGCTTTGTTCATCTCTTAGTGATCTTATGTTCATCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS-3UTR TCA 90 bp | CATTCACTGATGAACATAAGATCACTAAGAGATGAACAAAGCTACTCTTGGAGCACAGGAAGTGTAGGGTaGCTTACTACTCTGTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: HSLMNIRSLRDEQSYSWSTGSVG*LTTLLM Trigger: CATTAACAGAGTAGTAAGTCACCCTACACTTCCTGT...GCTCCAAGAGTAGCTTTGTTCATCTCTTAGTGATCTTATGTTCATCAGTGAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS-3UTR CCA 90 bp | ATGAACATAAGATCACTAAGAGATGAACAAAGCTACTCTTGGAGCTTGCTTCCCTACGTAGTGTGTATTTaGGGTTCCAAGTCTTTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: MNIRSLRDEQSYSWSLLPYVVCI*GSKSFE Trigger: TTCGAAAGACTTGGAACCCCAAATACACACTACGTA...GGGAAGCAAGCTCCAAGAGTAGCTTTGTTCATCTCTTAGTGATCTTATGTTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS-3UTR TCA 90 bp | CATTCACTGATGAACATAAGATCACTAAGAGATGAACAAAGCTACTCTTGGAGCCTCACACCATCAAAATaGCTACGTAGTGTGTATTTG | + |
|
Preference number: 4 (lower is better) Translates to: HSLMNIRSLRDEQSYSWSLTPSK*LRSVYL Trigger: CAAATACACACTACGTAGTCATTTTGATGGTGTGAG...GCTCCAAGAGTAGCTTTGTTCATCTCTTAGTGATCTTATGTTCATCAGTGAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS-3UTR TCA 90 bp | ATGAACATAAGATCACTAAGAGATGAACAAAGCTACTCTTGGAGCTTGCTTCCCGCCTATAAAATCAACTaGTGTAGGTATTCCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: MNIRSLRDEQSYSWSLLPAYKIN*CRYSMF Trigger: GAACATGGAATACCTACATCAGTTGATTTTATAGGC...GGGAAGCAAGCTCCAAGAGTAGCTTTGTTCATCTCTTAGTGATCTTATGTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS-3UTR GCA 90 bp | CTGATGAACATAAGATCACTAAGAGATGAACAAAGCTACTCTTGGAGCTTGCTTTGTCTCCATTGTAAGTaGAAACACATGGCAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LMNIRSLRDEQSYSWSLLCLHCK*KHMAAF Trigger: AAAAGCTGCCATGTGTTTGCACTTACAATGGAGACA...AAGCAAGCTCCAAGAGTAGCTTTGTTCATCTCTTAGTGATCTTATGTTCATCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS-3UTR CCA 90 bp | CTGATGAACATAAGATCACTAAGAGATGAACAAAGCTACTCTTGGAGCTTGCTTTACGTAGTGTGTATTTaGGGTTCCAAGTCTTTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LMNIRSLRDEQSYSWSLLYVVCI*GSKSFE Trigger: TTCGAAAGACTTGGAACCCCAAATACACACTACGTA...AAGCAAGCTCCAAGAGTAGCTTTGTTCATCTCTTAGTGATCTTATGTTCATCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS-3UTR TCA 90 bp | CATTCACTGATGAACATAAGATCACTAAGAGATGAACAAAGCTACTCTTGGAGCAATGACCTTACCCGTTaGGATCGTACATCTAATATT | + |
|
Preference number: 4 (lower is better) Translates to: HSLMNIRSLRDEQSYSWSNDLTR*DRTSNI Trigger: AATATTAGATGTACGATCTCAACGGGTAAGGTCATT...GCTCCAAGAGTAGCTTTGTTCATCTCTTAGTGATCTTATGTTCATCAGTGAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS-3UTR CCA 90 bp | ATGAACATAAGATCACTAAGAGATGAACAAAGCTACTCTTGGAGCTTGCTTCCCCCTATTTTGTGCTTATaGATCCGAAGTTTGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MNIRSLRDEQSYSWSLLPPILCL*IRSLSF Trigger: AAAAGACAAACTTCGGATCCATAAGCACAAAATAGG...GGGAAGCAAGCTCCAAGAGTAGCTTTGTTCATCTCTTAGTGATCTTATGTTCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS-3UTR CCA 90 bp | CTGATGAACATAAGATCACTAAGAGATGAACAAAGCTACTCTTGGAGCTTGCTTATTTTCAAATCACCTTaGTTCAGTTCTGTGCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: LMNIRSLRDEQSYSWSLLIFKSP*FSSVPY Trigger: ATATGGCACAGAACTGAACCAAGGTGATTTGAAAAT...AAGCAAGCTCCAAGAGTAGCTTTGTTCATCTCTTAGTGATCTTATGTTCATCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS-3UTR CAA 90 bp | CAGAGCACCACATTCCTAACCCTAAGGCAGCACACAGAGTCCAACAAAAAGTCCCGGGATCGTGTACTGTaGCGGCCGGGACAGCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: QSTTFLTLRQHTESNKKSRDRVL*RPGQLR Trigger: CCGGAGCTGTCCCGGCCGCAACAGTACACGATCCCG...GGACTTTTTGTTGGACTCTGTGTGCTGCCTTAGGGTTAGGAATGTGGTGCTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS-3UTR CAA 90 bp | AGAGATGAACAAAGCTACTCTTGGAGCTTGCTTCCCCACCAGAGCACCACATTCCGGGATCGTGTACTGTaGCGGCCGGGACAGCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RDEQSYSWSLLPHQSTTFRDRVL*RPGQLR Trigger: CCGGAGCTGTCCCGGCCGCAACAGTACACGATCCCG...GAATGTGGTGCTCTGGTGGGGAAGCAAGCTCCAAGAGTAGCTTTGTTCATCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS-3UTR CAA 90 bp | CTCTTGGAGCTTGCTTCCCCACCAGAGCACCACATTCCTAACCCTAAGGCAGCAACCGCACTACCAGTGTaGAAAGACGTAACCATATGG | + |
|
Preference number: 5 (lower is better) Translates to: LLELASPPEHHIPNPKAATALPV*KDVTIW Trigger: CCATATGGTTACGTCTTTCAACACTGGTAGTGCGGT...TGCTGCCTTAGGGTTAGGAATGTGGTGCTCTGGTGGGGAAGCAAGCTCCAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CAA 90 bp | TACTCTTGGAGCTTGCTTCCCCACCAGAGCACCACATTCCTAACCCTAAGGCAGGGAGCCTCCACATCTTaGGTTTCCTCTGATTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: YSWSLLPHQSTTFLTLRQGASTS*VSSDSK Trigger: CTTTGAATCAGAGGAAACCAAAGATGTGGAGGCTCC...CTGCCTTAGGGTTAGGAATGTGGTGCTCTGGTGGGGAAGCAAGCTCCAAGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CAA 90 bp | CTCTTGGAGCTTGCTTCCCCACCAGAGCACCACATTCCTAACCCTAAGGCAGCACCCTTTCGCTCCTTCTaGTACTGTTCCTTCAGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LLELASPPEHHIPNPKAAPFRSF*YCSFSL Trigger: TAAACTGAAGGAACAGTACAAGAAGGAGCGAAAGGG...TGCTGCCTTAGGGTTAGGAATGTGGTGCTCTGGTGGGGAAGCAAGCTCCAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013130.15 |
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| CDS-3UTR CAA 90 bp | GAACAAAGCTACTCTTGGAGCTTGCTTCCCCACCAGAGCACCACATTCCTAACCGGAGCCTCCACATCTTaGGTTTCCTCTGATTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: EQSYSWSLLPHQSTTFLTGASTS*VSSDSK Trigger: CTTTGAATCAGAGGAAACCAAAGATGTGGAGGCTCC...GGTTAGGAATGTGGTGCTCTGGTGGGGAAGCAAGCTCCAAGAGTAGCTTTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CAA 90 bp | CAGAGCACCACATTCCTAACCCTAAGGCAGCACACAGAGTCCAACAAAAAGTCCCCCAAACCTCAGCAGTaGGGGAGAGGTCATCTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: QSTTFLTLRQHTESNKKSPKPQQ*GRGHLY Trigger: ATAAAGATGACCTCTCCCCAACTGCTGAGGTTTGGG...GGACTTTTTGTTGGACTCTGTGTGCTGCCTTAGGGTTAGGAATGTGGTGCTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000013130.15 |
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| CDS-3UTR CAA 90 bp | TACTCTTGGAGCTTGCTTCCCCACCAGAGCACCACATTCCTAACCCTAAGGCAGGGGCCTTTTGATTTCTaGTCCTTTTTGCTTAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: YSWSLLPHQSTTFLTLRQGPFDF*SFLLRR Trigger: TCTCCTAAGCAAAAAGGACAAGAAATCAAAAGGCCC...CTGCCTTAGGGTTAGGAATGTGGTGCTCTGGTGGGGAAGCAAGCTCCAAGAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CAA 90 bp | CACACAGAGTCCAACAAAAAGTCCTTCCCCCTAAGAGCAGACTCCACATTGGCTTCACCAGGGGGCCTTTaGATTTCTTGTCCTTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: HTESNKKSFPLRADSTLASPGGL*ISCPFC Trigger: GCAAAAAGGACAAGAAATCAAAAGGCCCCCTGGTGA...AGCCAATGTGGAGTCTGCTCTTAGGGGGAAGGACTTTTTGTTGGACTCTGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CAA 90 bp | CACACAGAGTCCAACAAAAAGTCCTTCCCCCTAAGAGCAGACTCCACATTGGCTCAGATGGAAACGTTATaGGTTCAGCTTCCTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HTESNKKSFPLRADSTLAQMETL*VQLPLL Trigger: GAGCAGAGGAAGCTGAACCAATAACGTTTCCATCTG...AGCCAATGTGGAGTCTGCTCTTAGGGGGAAGGACTTTTTGTTGGACTCTGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000013130.15 |
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| CDS-3UTR CAA 90 bp | GAACAAAGCTACTCTTGGAGCTTGCTTCCCCACCAGAGCACCACATTCCTAACCAAAGAGGCACTCTTTTaGGCAGGAACTGTCTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: EQSYSWSLLPHQSTTFLTKEALF*AGTVFC Trigger: GCAAAAGACAGTTCCTGCCAAAAAGAGTGCCTCTTT...GGTTAGGAATGTGGTGCTCTGGTGGGGAAGCAAGCTCCAAGAGTAGCTTTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CAA 90 bp | ATCACATGTAGTGTCATGTCAGGAACCTTCATGATGGCAGTGATGCAGACCCCCACCGCACTACCAGTGTaGAAAGACGTAACCATATGG | + |
|
Preference number: 5 (lower is better) Translates to: ITCSVMSGTFMMAVMQTPTALPV*KDVTIW Trigger: CCATATGGTTACGTCTTTCAACACTGGTAGTGCGGT...GGGGGTCTGCATCACTGCCATCATGAAGGTTCCTGACATGACACTACATGTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS GCA 90 bp | GGTTCTACATCTAAAGAGGCACTCTTTTTGGCAGGAACTGTCTTTTaGAGGTTCCAAAGTTTCAGGGTGTGGTCCTCAGAGGCAGTAACG | + |
|
Preference number: 5 (lower is better) Translates to: GSTSKEALFLAGTVF*RFQSFRVWSSEAVT Trigger: CGTTACTGCCTCTGAGGACCACACCCTGAAACTTTGGAACCTGCAAAAGACAGTTCCTGCCAAAAAGAGTGCCTCTTTAGATGTAGAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CAA 90 bp | CTAAGAGATGAACAAAGCTACTCTTGGAGCTTGCTTCCCCACCAGAGCACCACACTACGTAGTGTGTATTaGGGGTTCCAAGTCTTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: LRDEQSYSWSLLPHQSTTLRSVY*GFQVFR Trigger: TCGAAAGACTTGGAACCCCAAATACACACTACGTAG...TGTGGTGCTCTGGTGGGGAAGCAAGCTCCAAGAGTAGCTTTGTTCATCTCTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CAA 90 bp | ACCAGGCAGATCACATGTAGTGTCATGTCAGGAACCTTCATGATGGCAGTGATGGGCAGGAACTGTCTTTaGCAGGTTCCAAAGTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: TRQITCSVMSGTFMMAVMGRNCL*QVPKFQ Trigger: CTGAAACTTTGGAACCTGCAAAAGACAGTTCCTGCC...CATCACTGCCATCATGAAGGTTCCTGACATGACACTACATGTGATCTGCCTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CAA 90 bp | CACCAGAGCACCACATTCCTAACCCTAAGGCAGCACACAGAGTCCAACAAAAAGAAAGAGGCACTCTTTTaGGCAGGAACTGTCTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: HQSTTFLTLRQHTESNKKKEALF*AGTVFC Trigger: GCAAAAGACAGTTCCTGCCAAAAAGAGTGCCTCTTT...CTTTTTGTTGGACTCTGTGTGCTGCCTTAGGGTTAGGAATGTGGTGCTCTGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CAA 90 bp | CTCTTGGAGCTTGCTTCCCCACCAGAGCACCACATTCCTAACCCTAAGGCAGCAATGAGCTGTTATTTCTaGTACACATGTCTTACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LLELASPPEHHIPNPKAAMSCYF*YTCLTV Trigger: GACAGTAAGACATGTGTACAAGAAATAACAGCTCAT...TGCTGCCTTAGGGTTAGGAATGTGGTGCTCTGGTGGGGAAGCAAGCTCCAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CAA 90 bp | TGTAGTGTCATGTCAGGAACCTTCATGATGGCAGTGATGCAGACCCCCTTTCTGGGGCCTTTTGATTTCTaGTCCTTTTTGCTTAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: CSVMSGTFMMAVMQTPFLGPFDF*SFLLRR Trigger: TCTCCTAAGCAAAAAGGACAAGAAATCAAAAGGCCC...CAGAAAGGGGGTCTGCATCACTGCCATCATGAAGGTTCCTGACATGACACTACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CAA 90 bp | ACAAAAACCGCTCAGTTCATATCCAGTATAGGGCACAGATACTGGAGTCCTTTTCAGCTTCCTCTGCTCTaGCACCTTCATGATCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TKTAQFISSIGHRYWSPFQLPLL*HLHDQP Trigger: TGGCTGATCATGAAGGTGCAAGAGCAGAGGAAGCTG...AAAAGGACTCCAGTATCTGTGCCCTATACTGGATATGAACTGAGCGGTTTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013130.15 |
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| CDS-3UTR CAA 90 bp | AGAGATGAACAAAGCTACTCTTGGAGCTTGCTTCCCCACCAGAGCACCACATTCTGGCGATATATGCCTTaGATGGATGGAAAGCAACAT | + |
|
Preference number: 5 (lower is better) Translates to: RDEQSYSWSLLPHQSTTFWRYMP*MDGKQH Trigger: ATGTTGCTTTCCATCCATCAAAGGCATATATCGCCA...GAATGTGGTGCTCTGGTGGGGAAGCAAGCTCCAAGAGTAGCTTTGTTCATCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS CCA 90 bp | TTTCGCTCCTTCTTGTACTGTTCCTTCAGTTTACTTATTAGCCCCTaGTCTACATCCCAAACCTCAGCAGTTGGGGAGAGGTCATCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: FRSFLYCSFSLLISP*STSQTSAVGERSSL Trigger: TAAAGATGACCTCTCCCCAACTGCTGAGGTTTGGGATGTAGACCAGGGGCTAATAAGTAAACTGAAGGAACAGTACAAGAAGGAGCGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013130.15 |
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| CDS-3UTR CAA 90 bp | CAGTTCATATCCAGTATAGGGCACAGATACTGGAGTCCTTTTTCTTTCTGTCCCTCACCAGGGGGCCTTTaGATTTCTTGTCCTTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: QFISSIGHRYWSPFSFCPSPGGL*ISCPFC Trigger: GCAAAAAGGACAAGAAATCAAAAGGCCCCCTGGTGA...GGGACAGAAAGAAAAAGGACTCCAGTATCTGTGCCCTATACTGGATATGAACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CAA 90 bp | ACCAGGCAGATCACATGTAGTGTCATGTCAGGAACCTTCATGATGGCAGTGATGTTATGGATCCGAAGTTaGTCTTTTCCTTCTGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: TRQITCSVMSGTFMMAVMLWIRS*SFPSGM Trigger: CATCCCAGAAGGAAAAGACAAACTTCGGATCCATAA...CATCACTGCCATCATGAAGGTTCCTGACATGACACTACATGTGATCTGCCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CAA 90 bp | TGTAGTGTCATGTCAGGAACCTTCATGATGGCAGTGATGCAGACCCCCTTTCTGTATAGTCTGCATCATTaGTTACCGTCAAGTCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: CSVMSGTFMMAVMQTPFLYSLHH*LPSSLQ Trigger: TTGCAGACTTGACGGTAACAAATGATGCAGACTATA...CAGAAAGGGGGTCTGCATCACTGCCATCATGAAGGTTCCTGACATGACACTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CAA 90 bp | CAGATCACATGTAGTGTCATGTCAGGAACCTTCATGATGGCAGTGATGCAGACCTGGCGATATATGCCTTaGATGGATGGAAAGCAACAT | + |
|
Preference number: 5 (lower is better) Translates to: QITCSVMSGTFMMAVMQTWRYMP*MDGKQH Trigger: ATGTTGCTTTCCATCCATCAAAGGCATATATCGCCA...GGTCTGCATCACTGCCATCATGAAGGTTCCTGACATGACACTACATGTGATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CAA 90 bp | AAAAACAAAAACCGCTCAGTTCATATCCAGTATAGGGCACAGATACTGGAGTCCGGCAGGAACTGTCTTTaGCAGGTTCCAAAGTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: KNKNRSVHIQYRAQILESGRNCL*QVPKFQ Trigger: CTGAAACTTTGGAACCTGCAAAAGACAGTTCCTGCC...GGACTCCAGTATCTGTGCCCTATACTGGATATGAACTGAGCGGTTTTTGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CAA 90 bp | GTTCATATCCAGTATAGGGCACAGATACTGGAGTCCTTTTTCTTTCTGTCCCACGATTTCTTGTCCTTTTaGCTTAGGAGATTCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: VHIQYRAQILESFFFLSHDFLSF*LRRFTT Trigger: GGTGGTGAATCTCCTAAGCAAAAAGGACAAGAAATC...GTGGGACAGAAAGAAAAAGGACTCCAGTATCTGTGCCCTATACTGGATATGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS TCA 90 bp | GAAAGACGTAACCATATGGGCTGGATCACAGCCTATAAAATCAACTaGTGTAGGTATTCCATGTTCCTTGTCTCCATTGTAAGTGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: ERRNHMGWITAYKIN*CRYSMFLVSIVSAN Trigger: GTTTGCACTTACAATGGAGACAAGGAACATGGAATACCTACATCAGTTGATTTTATAGGCTGTGATCCAGCCCATATGGTTACGTCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CAA 90 bp | CATTCACTGATGAACATAAGATCACTAAGAGATGAACAAAGCTACTCTTGGAGCCAGATGGAAACGTTATaGGTTCAGCCCATTCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: HSLMNIRSLRDEQSYSWSQMETL*VQPILY Trigger: GTACAGAATGGGCTGAACCAATAACGTTTCCATCTG...GCTCCAAGAGTAGCTTTGTTCATCTCTTAGTGATCTTATGTTCATCAGTGAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169503.4 |
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| CDS-3UTR CAA 90 bp | CATTCACTGATGAACATAAGATCACTAAGAGATGAACAAAGCTACTCTTGGAGCTTATGGATCCGAAGTTaGTCTTTTCCTTCTGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: HSLMNIRSLRDEQSYSWSLWIRS*SFPSGM Trigger: CATCCCAGAAGGAAAAGACAAACTTCGGATCCATAA...GCTCCAAGAGTAGCTTTGTTCATCTCTTAGTGATCTTATGTTCATCAGTGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CAA 90 bp | ACAAAAACCGCTCAGTTCATATCCAGTATAGGGCACAGATACTGGAGTCCTTTTATGAGCTGTTATTTCTaGTACACATGTCTTACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: TKTAQFISSIGHRYWSPFMSCYF*YTCLTV Trigger: GACAGTAAGACATGTGTACAAGAAATAACAGCTCAT...AAAAGGACTCCAGTATCTGTGCCCTATACTGGATATGAACTGAGCGGTTTTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS-3UTR CAA 90 bp | CATTCACTGATGAACATAAGATCACTAAGAGATGAACAAAGCTACTCTTGGAGCTATAGTCTGCATCATTaGTTACCGTCAAGTCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: HSLMNIRSLRDEQSYSWSYSLHH*LPSSLQ Trigger: TTGCAGACTTGACGGTAACAAATGATGCAGACTATA...GCTCCAAGAGTAGCTTTGTTCATCTCTTAGTGATCTTATGTTCATCAGTGAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS GCA 72 bp | GATCGTGTACTGTTGCGGCCGGGACAGCTCCGGGCCTaGCGGGGGCCCCGCCGCCTCGGCGGCCGGAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: DRVLLRPGQLRA*RGPRRLGGRRT Trigger: GGTCCTCCGGCCGCCGAGGCGGCGGGGCCCCCGGCAGGCCCGGAGCTGTCCCGGCCGCAACAGTACACGATC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS GCA 72 bp | TCTAAAGAGGCACTCTTTTTGGCAGGAACTGTCTTTTaGAGGTTCCAAAGTTTCAGGGTGTGGTCCTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SKEALFLAGTVF*RFQSFRVWSSE Trigger: CTCTGAGGACCACACCCTGAAACTTTGGAACCTGCAAAAGACAGTTCCTGCCAAAAAGAGTGCCTCTTTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS CCA 72 bp | TTCTTGTACTGTTCCTTCAGTTTACTTATTAGCCCCTaGTCTACATCCCAAACCTCAGCAGTTGGGGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: FLYCSFSLLISP*STSQTSAVGER Trigger: CCTCTCCCCAACTGCTGAGGTTTGGGATGTAGACCAGGGGCTAATAAGTAAACTGAAGGAACAGTACAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013130.15 |
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| CDS CAA 72 bp | TTATTAGCCCCTGGTCTACATCCCAAACCTCAGCAGTaGGGGAGAGGTCATCTTTATCCCATTCTGTACCAT | + |
|
Preference number: 6 (lower is better) Translates to: LLAPGLHPKPQQ*GRGHLYPILYH Trigger: ATGGTACAGAATGGGATAAAGATGACCTCTCCCCAACTGCTGAGGTTTGGGATGTAGACCAGGGGCTAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013130.15 |
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| CDS CAA 72 bp | TATTGGCAGGCAAATCATAACTATAGTCTGCATCATTaGTTACCGTCAAGTCTGCAAGGTCTCCAAGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: YWQANHNYSLHH*LPSSLQGLQGP Trigger: TGGGCCTTGGAGACCTTGCAGACTTGACGGTAACAAATGATGCAGACTATAGTTATGATTTGCCTGCCAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS CAA 90 bp | AGGCATCTTTATTGGCAGGCAAATCATAACTATAGTCTGCATCATTaGTTACCGTCAAGTCTGCAAGGTCTCCAAGGCCCAGTACACTTA | + |
|
Preference number: 6 (lower is better) Translates to: RHLYWQANHNYSLHH*LPSSLQGLQGPVHL Trigger: TAAGTGTACTGGGCCTTGGAGACCTTGCAGACTTGACGGTAACAAATGATGCAGACTATAGTTATGATTTGCCTGCCAATAAAGATGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS GCA 72 bp | GGCATCTTTATTGGCAGGCAAATCATAACTATAGTCTaGATCATTTGTTACCGTCAAGTCTGCAAGGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GIFIGRQIITIV*IICYRQVCKVS Trigger: GGAGACCTTGCAGACTTGACGGTAACAAATGATGCAGACTATAGTTATGATTTGCCTGCCAATAAAGATGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS CAA 72 bp | CAAGAGCATCAGCTCCTGCACTGGCGATATATGCCTTaGATGGATGGAAAGCAACATCATAAATTGACTCAT | + |
|
Preference number: 6 (lower is better) Translates to: QEHQLLHWRYMP*MDGKQHHKLTH Trigger: ATGAGTCAATTTATGATGTTGCTTTCCATCCATCAAAGGCATATATCGCCAGTGCAGGAGCTGATGCTCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS CCA 72 bp | ATTACCGCACTACCAGTGTTGAAAGACGTAACCATATaGGCTGGATCACAGCCTATAAAATCAACTGATGTA | + |
|
Preference number: 6 (lower is better) Translates to: ITALPVLKDVTI*AGSQPIKSTDV Trigger: TACATCAGTTGATTTTATAGGCTGTGATCCAGCCCATATGGTTACGTCTTTCAACACTGGTAGTGCGGTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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| CDS CAA 90 bp | ATACTTTGGCAAGAGCATCAGCTCCTGCACTGGCGATATATGCCTTaGATGGATGGAAAGCAACATCATAAATTGACTCATCCAATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ILWQEHQLLHWRYMP*MDGKQHHKLTHPIS Trigger: AGAAATTGGATGAGTCAATTTATGATGTTGCTTTCCATCCATCAAAGGCATATATCGCCAGTGCAGGAGCTGATGCTCTTGCCAAAGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS TCA 72 bp | AACCATATGGGCTGGATCACAGCCTATAAAATCAACTaGTGTAGGTATTCCATGTTCCTTGTCTCCATTGTA | + |
|
Preference number: 6 (lower is better) Translates to: NHMGWITAYKIN*CRYSMFLVSIV Trigger: TACAATGGAGACAAGGAACATGGAATACCTACATCAGTTGATTTTATAGGCTGTGATCCAGCCCATATGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS CAA 90 bp | CACTGGCGATATATGCCTTTGATGGATGGAAAGCAACATCATAAATaGACTCATCCAATTTCTTCCTATGAGCTGTTATTTCTTGTACAC | + |
|
Preference number: 6 (lower is better) Translates to: HWRYMPLMDGKQHHK*THPISSYELLFLVH Trigger: GTGTACAAGAAATAACAGCTCATAGGAAGAAATTGGATGAGTCAATTTATGATGTTGCTTTCCATCCATCAAAGGCATATATCGCCAGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
||
| CDS TCA 72 bp | TCTGAATTAGACAGTCCAAGTAATGACCTTACCCGTTaGGATCGTACATCTAATATTGTATCTGTGTATCCT | + |
|
Preference number: 6 (lower is better) Translates to: SELDSPSNDLTR*DRTSNIVSVYP Trigger: AGGATACACAGATACAATATTAGATGTACGATCTCAACGGGTAAGGTCATTACTTGGACTGTCTAATTCAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013130.15 ENSMUST00000169503.4 |
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