Pregenerated sensors for STRIP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039629Ensembl transcript IDs: ENSMUST00000046028.12, ENSMUST00000115224.8, ENSMUST00000151738.4
Found 317 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCCGTGGGTTAAGGCACTTGCTGCCAAGCCCGAGGACCTCAGTTTaGTCCCTGGAATCCCTGTGGTGGAAGGAGAGGACCAACTCCTGT | + |
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Preference number: 1 (lower is better) Translates to: LRGLRHLLPSPRTSV*SLESLWWKERTNSC Trigger: ACAGGAGTTGGTCCTCTCCTTCCACCACAGGGATTCCAGGGATCAAACTGAGGTCCTCGGGCTTGGCAGCAAGTGCCTTAACCCACGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
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| 3UTR CCA 90 bp | TCAGCAGACAGAGGAAGGAGGATCACTCCAAGTTCAAGGCCAGCCTaGCTGTACAGTAAGGTCTGGCCTAGCCAGGGCTGCAAAGCCGGA | + |
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Preference number: 1 (lower is better) Translates to: SADRGRRITPSSRPA*LYSKVWPSQGCKAG Trigger: TCCGGCTTTGCAGCCCTGGCTAGGCCAGACCTTACTGTACAGCCAGGCTGGCCTTGAACTTGGAGTGATCCTCCTTCCTCTGTCTGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR TCA 90 bp | ATGCTGGGTGTCTGTCTGTGCTGGATGCTGGGCTGGAACTGCCCTTaGCACACATTCCTAGAGTTCAGTATGAAGGCTGAGTGGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: MLGVCLCWMLGWNCP*HTFLEFSMKAEWAG Trigger: TCCTGCCCACTCAGCCTTCATACTGAACTCTAGGAATGTGTGTCAAGGGCAGTTCCAGCCCAGCATCCAGCACAGACAGACACCCAGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR TCA 90 bp | CCACCAAAGAGGAGACTCTGGAAGCCTAGGCTGACGCACTCAAACTaGCAAAAGGAGACACCAGGATTTGGTTCTTCAGGAAAAGGCGTG | + |
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Preference number: 1 (lower is better) Translates to: PPKRRLWKPRLTHSN*QKETPGFGSSGKGV Trigger: CACGCCTTTTCCTGAAGAACCAAATCCTGGTGTCTCCTTTTGTCAGTTTGAGTGCGTCAGCCTAGGCTTCCAGAGTCTCCTCTTTGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR CCA 90 bp | ATTGTTATTAAGGAAAACAATTCAGGGGCAGGCAAGATGGCTCCGTaGGTTAAGGCACTTGCTGCCAAGCCCGAGGACCTCAGTTTGATC | + |
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Preference number: 1 (lower is better) Translates to: IVIKENNSGAGKMAP*VKALAAKPEDLSLI Trigger: GATCAAACTGAGGTCCTCGGGCTTGGCAGCAAGTGCCTTAACCCACGGAGCCATCTTGCCTGCCCCTGAATTGTTTTCCTTAATAACAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
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| 3UTR TCA 90 bp | GTCTTTTATCCTAGCACTAGGAAGACAGAGGCAGGCAGGTCTCTATaGGTTCAAGGTCAAGCTGGTCTACTTAGCAAGTTCTTGGACATC | + |
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Preference number: 1 (lower is better) Translates to: VFYPSTRKTEAGRSL*VQGQAGLLSKFLDI Trigger: GATGTCCAAGAACTTGCTAAGTAGACCAGCTTGACCTTGAACTCATAGAGACCTGCCTGCCTCTGTCTTCCTAGTGCTAGGATAAAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
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| 3UTR GCA 90 bp | AAGACATCAGATCTTCAGAAACTAGAATTACAGATGGCTGTAAGCTaGCATGAAGCTGGGTCCTCTGGACCAGCAGACAGTGCACTTAAC | + |
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Preference number: 1 (lower is better) Translates to: KTSDLQKLELQMAVS*HEAGSSGPADSALN Trigger: GTTAAGTGCACTGTCTGCTGGTCCAGAGGACCCAGCTTCATGGCAGCTTACAGCCATCTGTAATTCTAGTTTCTGAAGATCTGATGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
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| 3UTR TCA 90 bp | AGACAAGGCTTATTTTATGGCCTGTCCCTATCCCCCTGCTGGAGATaGATGTCGTGGGTCAAATGCCATGACAAACTTCCTTTCACTATT | + |
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Preference number: 1 (lower is better) Translates to: RQGLFYGLSLSPCWR*MSWVKCHDKLPFTI Trigger: AATAGTGAAAGGAAGTTTGTCATGGCATTTGACCCACGACATTCATCTCCAGCAGGGGGATAGGGACAGGCCATAAAATAAGCCTTGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR CCA 90 bp | GAATGTCGTGGGTCAAATGCCATGACAAACTTCCTTTCACTATTGTaGCTGACAAAAGTGAGCAGGGTTCTAGGCAAGATTAAAGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: ECRGSNAMTNFLSLL*LTKVSRVLGKIKAG Trigger: ACCTGCTTTAATCTTGCCTAGAACCCTGCTCACTTTTGTCAGCCACAATAGTGAAAGGAAGTTTGTCATGGCATTTGACCCACGACATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR TCA 90 bp | CAACATTTGAAGTGTGAAATACAGTCTAAAGTTGGTTTTGCTAAATaGTACGTCCCAGGCATTTTGAGTGGGCAAGAAGACAAGGCTTAT | + |
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Preference number: 1 (lower is better) Translates to: QHLKCEIQSKVGFAK*YVPGILSGQEDKAY Trigger: ATAAGCCTTGTCTTCTTGCCCACTCAAAATGCCTGGGACGTATCATTTAGCAAAACCAACTTTAGACTGTATTTCACACTTCAAATGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR CAA 90 bp | GCTCCGTGGGTTAAGGCACTTGCTGCCAAGCCCGAGGACCTCAGTTaGATCCCTGGAATCCCTGTGGTGGAAGGAGAGGACCAACTCCTG | + |
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Preference number: 2 (lower is better) Translates to: APWVKALAAKPEDLS*IPGIPVVEGEDQLL Trigger: CAGGAGTTGGTCCTCTCCTTCCACCACAGGGATTCCAGGGATCAAACTGAGGTCCTCGGGCTTGGCAGCAAGTGCCTTAACCCACGGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
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| 3UTR-3UTR CCA 90 bp | GACAGAGGAAGGAGGATCACTCCAAGTTCAAGGCCAGCCTGGCTGTACAGTAAGAAAGCCGGATCTGCCTaGCTCCCATGGCCACTCAGG | + |
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Preference number: 2 (lower is better) Translates to: DRGRRITPSSRPAWLYSKKAGSA*LPWPLR Trigger: CCTGAGTGGCCATGGGAGCCAGGCAGATCCGGCTTT...CTTACTGTACAGCCAGGCTGGCCTTGAACTTGGAGTGATCCTCCTTCCTCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR-3UTR TCA 90 bp | TGTAAGTTGTCCTCTGACTTCTGCACCTGCGCTGTAGCATACAGGTGCCCAACAGGCTGTAAGCTGCCATaGAGCTGGGTCCTCTGGACC | + |
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Preference number: 2 (lower is better) Translates to: CKLSSDFCTCAVAYRCPTGCKLP*SWVLWT Trigger: GGTCCAGAGGACCCAGCTTCATGGCAGCTTACAGCC...TGTTGGGCACCTGTATGCTACAGCGCAGGTGCAGAAGTCAGAGGACAACTTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTGCCAAGCCCGAGGACCTCAGTTTGATCCCTGGAATCCCTGTGGTGGAAGGTTGTCCTCTGACTTCTaGACCTGCGCTGTAGCATAC | + |
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Preference number: 2 (lower is better) Translates to: CCQARGPQFDPWNPCGGRLSSDF*TCAVAY Trigger: GTATGCTACAGCGCAGGTGCAGAAGTCAGAGGACAA...CCTTCCACCACAGGGATTCCAGGGATCAAACTGAGGTCCTCGGGCTTGGCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
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| 3UTR-3UTR CCA 90 bp | GACAGAGGAAGGAGGATCACTCCAAGTTCAAGGCCAGCCTGGCTGTACAGTAAGGTCTGTGCTGGATGCTaGGCTGGAACTGCCCTTGAC | + |
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Preference number: 2 (lower is better) Translates to: DRGRRITPSSRPAWLYSKVCAGC*AGTALD Trigger: GTCAAGGGCAGTTCCAGCCCAGCATCCAGCACAGAC...CTTACTGTACAGCCAGGCTGGCCTTGAACTTGGAGTGATCCTCCTTCCTCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR-3UTR CCA 90 bp | GACAGAGGAAGGAGGATCACTCCAAGTTCAAGGCCAGCCTGGCTGTACAGTAAGGTACCGACGCAGAGATaGCATGTCACAGGATTCCGG | + |
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Preference number: 2 (lower is better) Translates to: DRGRRITPSSRPAWLYSKVPTQR*HVTGFR Trigger: CCGGAATCCTGTGACATGCCATCTCTGCGTCGGTAC...CTTACTGTACAGCCAGGCTGGCCTTGAACTTGGAGTGATCCTCCTTCCTCTGTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR-3UTR TCA 90 bp | GACAGAGGAAGGAGGATCACTCCAAGTTCAAGGCCAGCCTGGCTGTACAGTAAGGGCTGGAACTGCCCTTaGCACACATTCCTAGAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: DRGRRITPSSRPAWLYSKGWNCP*HTFLEF Trigger: GAACTCTAGGAATGTGTGTCAAGGGCAGTTCCAGCC...CTTACTGTACAGCCAGGCTGGCCTTGAACTTGGAGTGATCCTCCTTCCTCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR-3UTR GCA 90 bp | GTACATCAGGAGGGACTACCAGGCAGAACCCCAGAGTCCTCTCAAAATGACTCTTCTGTCTGTGCTGGATaGTGGGCTGGAACTGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: VHQEGLPGRTPESSQNDSSVCAG*WAGTAL Trigger: AAGGGCAGTTCCAGCCCAGCATCCAGCACAGACAGA...AGAGTCATTTTGAGAGGACTCTGGGGTTCTGCCTGGTAGTCCCTCCTGATGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR-3UTR TCA 90 bp | GTACATCAGGAGGGACTACCAGGCAGAACCCCAGAGTCCTCTCAAAATGACTCTGGCTGGAACTGCCCTTaGCACACATTCCTAGAGTTC | + |
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Preference number: 2 (lower is better) Translates to: VHQEGLPGRTPESSQNDSGWNCP*HTFLEF Trigger: GAACTCTAGGAATGTGTGTCAAGGGCAGTTCCAGCC...AGAGTCATTTTGAGAGGACTCTGGGGTTCTGCCTGGTAGTCCCTCCTGATGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR-3UTR TCA 90 bp | GACAGAGGAAGGAGGATCACTCCAAGTTCAAGGCCAGCCTGGCTGTACAGTAAGATCCATCGGGAGATTTaGAGGCCAACTAGGCACCTA | + |
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Preference number: 2 (lower is better) Translates to: DRGRRITPSSRPAWLYSKIHREI*RPTRHL Trigger: TAGGTGCCTAGTTGGCCTTCAAATCTCCCGATGGAT...CTTACTGTACAGCCAGGCTGGCCTTGAACTTGGAGTGATCCTCCTTCCTCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR-3UTR TCA 90 bp | GTACATCAGGAGGGACTACCAGGCAGAACCCCAGAGTCCTCTCAAAATGACTCTATCCATCGGGAGATTTaGAGGCCAACTAGGCACCTA | + |
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Preference number: 2 (lower is better) Translates to: VHQEGLPGRTPESSQNDSIHREI*RPTRHL Trigger: TAGGTGCCTAGTTGGCCTTCAAATCTCCCGATGGAT...AGAGTCATTTTGAGAGGACTCTGGGGTTCTGCCTGGTAGTCCCTCCTGATGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR-3UTR TCA 90 bp | TTTTCCACAGTAGGAAACCCTGCTACCCGAAGCACAGAGGTACTGATAGCTCCCCTGACGCACTCAAACTaGCAAAAGGAGACACCAGGA | + |
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Preference number: 2 (lower is better) Translates to: FSTVGNPATRSTEVLIAPLTHSN*QKETPG Trigger: TCCTGGTGTCTCCTTTTGTCAGTTTGAGTGCGTCAG...GGGAGCTATCAGTACCTCTGTGCTTCGGGTAGCAGGGTTTCCTACTGTGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR-3UTR TCA 90 bp | TGCTGCCAAGCCCGAGGACCTCAGTTTGATCCCTGGAATCCCTGTGGTGGAAGGCCAGGCCATAAAAGCTaGACTTATATCTTGAAATAC | + |
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Preference number: 2 (lower is better) Translates to: CCQARGPQFDPWNPCGGRPGHKS*TYILKY Trigger: GTATTTCAAGATATAAGTTCAGCTTTTATGGCCTGG...CCTTCCACCACAGGGATTCCAGGGATCAAACTGAGGTCCTCGGGCTTGGCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTCCACAGTAGGAAACCCTGCTACCCGAAGCACAGAGGTACTGATAGCTCCCAATAGCCCTGAACTATaGTGGGTGTCTGTCTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: FSTVGNPATRSTEVLIAPNSPEL*WVSVCA Trigger: AGCACAGACAGACACCCAGCATAGTTCAGGGCTATT...GGGAGCTATCAGTACCTCTGTGCTTCGGGTAGCAGGGTTTCCTACTGTGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR-3UTR CCA 90 bp | GTACATCAGGAGGGACTACCAGGCAGAACCCCAGAGTCCTCTCAAAATGACTCTCCCAGGCATTTTGAGTaGGCAAGAAGACAAGGCTTA | + |
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Preference number: 2 (lower is better) Translates to: VHQEGLPGRTPESSQNDSPRHFE*ARRQGL Trigger: TAAGCCTTGTCTTCTTGCCCACTCAAAATGCCTGGG...AGAGTCATTTTGAGAGGACTCTGGGGTTCTGCCTGGTAGTCCCTCCTGATGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR-3UTR CCA 90 bp | TTCCAGGAGCTAAGAAAGCACTTTGAGAAAGACTGCCACCAAAGAGGAGACTCTGTACCGACGCAGAGATaGCATGTCACAGGATTCCGG | + |
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Preference number: 2 (lower is better) Translates to: FQELRKHFEKDCHQRGDSVPTQR*HVTGFR Trigger: CCGGAATCCTGTGACATGCCATCTCTGCGTCGGTAC...AGAGTCTCCTCTTTGGTGGCAGTCTTTCTCAAAGTGCTTTCTTAGCTCCTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR-3UTR TCA 90 bp | TTCCAGGAGCTAAGAAAGCACTTTGAGAAAGACTGCCACCAAAGAGGAGACTCTGTTCAGTATGAAGGCTaGGTGGGCAGGACAGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: FQELRKHFEKDCHQRGDSVQYEG*VGRTGK Trigger: TTTGCCTGTCCTGCCCACTCAGCCTTCATACTGAAC...AGAGTCTCCTCTTTGGTGGCAGTCTTTCTCAAAGTGCTTTCTTAGCTCCTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR-3UTR CCA 90 bp | ACTTCATCTGTTACGTACTTCACATTCTCTGCCATTTTCCACAGTAGGAAACCCGTCTGTGCTGGATGCTaGGCTGGAACTGCCCTTGAC | + |
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Preference number: 2 (lower is better) Translates to: TSSVTYFTFSAIFHSRKPVCAGC*AGTALD Trigger: GTCAAGGGCAGTTCCAGCCCAGCATCCAGCACAGAC...GGGTTTCCTACTGTGGAAAATGGCAGAGAATGTGAAGTACGTAACAGATGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR-3UTR CCA 90 bp | GACAGAGGAAGGAGGATCACTCCAAGTTCAAGGCCAGCCTGGCTGTACAGTAAGCACAGTATGCTGTTCTaGAACATGCAGTGTTTTGGA | + |
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Preference number: 2 (lower is better) Translates to: DRGRRITPSSRPAWLYSKHSMLF*NMQCFG Trigger: TCCAAAACACTGCATGTTCCAGAACAGCATACTGTG...CTTACTGTACAGCCAGGCTGGCCTTGAACTTGGAGTGATCCTCCTTCCTCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR-3UTR GCA 90 bp | ACTTCATCTGTTACGTACTTCACATTCTCTGCCATTTTCCACAGTAGGAAACCCTCTGTCTGTGCTGGATaGTGGGCTGGAACTGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: TSSVTYFTFSAIFHSRKPSVCAG*WAGTAL Trigger: AAGGGCAGTTCCAGCCCAGCATCCAGCACAGACAGA...GGGTTTCCTACTGTGGAAAATGGCAGAGAATGTGAAGTACGTAACAGATGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR-3UTR CCA 90 bp | CGTGGGTCAAATGCCATGACAAACTTCCTTTCACTATTGTGGCTGACAAAAGTGAGTATGAAGGCTGAGTaGGCAGGACAGGCAAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: RGSNAMTNFLSLLWLTKVSMKAE*AGQAKH Trigger: GTGCTTTGCCTGTCCTGCCCACTCAGCCTTCATACT...CACTTTTGTCAGCCACAATAGTGAAAGGAAGTTTGTCATGGCATTTGACCCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR-3UTR CCA 90 bp | CGTGGGTCAAATGCCATGACAAACTTCCTTTCACTATTGTGGCTGACAAAAGTGAGCCCTGAACTATGCTaGGTGTCTGTCTGTGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: RGSNAMTNFLSLLWLTKVSPELC*VSVCAG Trigger: TCCAGCACAGACAGACACCCAGCATAGTTCAGGGCT...CACTTTTGTCAGCCACAATAGTGAAAGGAAGTTTGTCATGGCATTTGACCCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR-3UTR CCA 90 bp | TTTTCCACAGTAGGAAACCCTGCTACCCGAAGCACAGAGGTACTGATAGCTCCCTTCCTTTCACTATTGTaGCTGACAAAAGTGAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: FSTVGNPATRSTEVLIAPFLSLL*LTKVSR Trigger: CCTGCTCACTTTTGTCAGCCACAATAGTGAAAGGAA...GGGAGCTATCAGTACCTCTGTGCTTCGGGTAGCAGGGTTTCCTACTGTGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR-3UTR CCA 90 bp | CTGGTTAATCTGAAGCTATTCCTAACCACATATGCTATCTCTCAAACTGGGAGAACTTGTTGGAGGTGGTaGCCCAGGCCTGTGACACTC | + |
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Preference number: 2 (lower is better) Translates to: LVNLKLFLTTYAISQTGRTCWRW*PRPVTL Trigger: GAGTGTCACAGGCCTGGGCCACCACCTCCAACAAGT...TCTCCCAGTTTGAGAGATAGCATATGTGGTTAGGAATAGCTTCAGATTAACCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR-3UTR TCA 90 bp | TTTTCCACAGTAGGAAACCCTGCTACCCGAAGCACAGAGGTACTGATAGCTCCCTCTGTAGATGGTACATaGGTAATAAAGCTGGCATTC | + |
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Preference number: 2 (lower is better) Translates to: FSTVGNPATRSTEVLIAPSVDGT*VIKLAF Trigger: GAATGCCAGCTTTATTACTCATGTACCATCTACAGA...GGGAGCTATCAGTACCTCTGTGCTTCGGGTAGCAGGGTTTCCTACTGTGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR-3UTR GCA 90 bp | TTCCAGGAGCTAAGAAAGCACTTTGAGAAAGACTGCCACCAAAGAGGAGACTCTAATAGCCCTGAACTATaGTGGGTGTCTGTCTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: FQELRKHFEKDCHQRGDSNSPEL*WVSVCA Trigger: AGCACAGACAGACACCCAGCATAGTTCAGGGCTATT...AGAGTCTCCTCTTTGGTGGCAGTCTTTCTCAAAGTGCTTTCTTAGCTCCTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR-3UTR CCA 90 bp | TTCCAGGAGCTAAGAAAGCACTTTGAGAAAGACTGCCACCAAAGAGGAGACTCTGGAGACACCAGGATTTaGTTCTTCAGGAAAAGGCGT | + |
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Preference number: 2 (lower is better) Translates to: FQELRKHFEKDCHQRGDSGDTRI*FFRKRR Trigger: ACGCCTTTTCCTGAAGAACCAAATCCTGGTGTCTCC...AGAGTCTCCTCTTTGGTGGCAGTCTTTCTCAAAGTGCTTTCTTAGCTCCTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR-3UTR TCA 90 bp | ACTTCATCTGTTACGTACTTCACATTCTCTGCCATTTTCCACAGTAGGAAACCCCCAAGTTTGTCCTGCTaGGATGAATCCTCTGGGTTC | + |
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Preference number: 2 (lower is better) Translates to: TSSVTYFTFSAIFHSRKPPSLSC*DESSGF Trigger: GAACCCAGAGGATTCATCTCAGCAGGACAAACTTGG...GGGTTTCCTACTGTGGAAAATGGCAGAGAATGTGAAGTACGTAACAGATGAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR-3UTR CCA 90 bp | TGGACCAGCTCTCTAGGAATAAAGTGTCCTTGTGCTATCATAAAAAGATTCATTGGTGTCTGTCTGTGCTaGATGCTGGGCTGGAACTGC | + |
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Preference number: 2 (lower is better) Translates to: WTSSLGIKCPCAIIKRFIGVCLC*MLGWNC Trigger: GCAGTTCCAGCCCAGCATCCAGCACAGACAGACACC...AATGAATCTTTTTATGATAGCACAAGGACACTTTATTCCTAGAGAGCTGGTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR-3UTR CCA 90 bp | CTGGTTAATCTGAAGCTATTCCTAACCACATATGCTATCTCTCAAACTGGGAGAAGCCCTGAACTATGCTaGGTGTCTGTCTGTGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: LVNLKLFLTTYAISQTGRSPELC*VSVCAG Trigger: TCCAGCACAGACAGACACCCAGCATAGTTCAGGGCT...TCTCCCAGTTTGAGAGATAGCATATGTGGTTAGGAATAGCTTCAGATTAACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR-3UTR TCA 90 bp | ACTTCATCTGTTACGTACTTCACATTCTCTGCCATTTTCCACAGTAGGAAACCCTTGATCCATTTGCTTTaGCTCAGGACCCCAGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: TSSVTYFTFSAIFHSRKPLIHLL*LRTPVL Trigger: CAAGACTGGGGTCCTGAGTCAAAGCAAATGGATCAA...GGGTTTCCTACTGTGGAAAATGGCAGAGAATGTGAAGTACGTAACAGATGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR-3UTR GCA 90 bp | AAAGGAGACACCAGGATTTGGTTCTTCAGGAAAAGGCGTGAGATGAAGCTCAAGTGCTGTTCTGGAACATaGAGTGTTTTGGAAACAGTC | + |
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Preference number: 2 (lower is better) Translates to: KGDTRIWFFRKRREMKLKCCSGT*SVLETV Trigger: GACTGTTTCCAAAACACTGCATGTTCCAGAACAGCA...CTTGAGCTTCATCTCACGCCTTTTCCTGAAGAACCAAATCCTGGTGTCTCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR-3UTR GCA 90 bp | TTCCAGGAGCTAAGAAAGCACTTTGAGAAAGACTGCCACCAAAGAGGAGACTCTAAACCCTACACAGTATaGTGTTCTGGAACATGCAGT | + |
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Preference number: 2 (lower is better) Translates to: FQELRKHFEKDCHQRGDSKPYTV*CSGTCS Trigger: ACTGCATGTTCCAGAACAGCATACTGTGTAGGGTTT...AGAGTCTCCTCTTTGGTGGCAGTCTTTCTCAAAGTGCTTTCTTAGCTCCTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| 3UTR-3UTR CCA 90 bp | AAAGGAGACACCAGGATTTGGTTCTTCAGGAAAAGGCGTGAGATGAAGCTCAAGCACAGTATGCTGTTCTaGAACATGCAGTGTTTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: KGDTRIWFFRKRREMKLKHSMLF*NMQCFG Trigger: TCCAAAACACTGCATGTTCCAGAACAGCATACTGTG...CTTGAGCTTCATCTCACGCCTTTTCCTGAAGAACCAAATCCTGGTGTCTCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR CAA 90 bp | GATGAATGTCGTGGGTCAAATGCCATGACAAACTTCCTTTCACTATaGTGGCTGACAAAAGTGAGCAGGGTTCTAGGCAAGATTAAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: DECRGSNAMTNFLSL*WLTKVSRVLGKIKA Trigger: TGCTTTAATCTTGCCTAGAACCCTGCTCACTTTTGTCAGCCACAATAGTGAAAGGAAGTTTGTCATGGCATTTGACCCACGACATTCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR TCA 90 bp | TGGACCAGCTCTCTAGGAATAAAGTGTCCTTGTGCTATCATAAAAAGATTCATTGTTCAGTATGAAGGCTaGGTGGGCAGGACAGGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: WTSSLGIKCPCAIIKRFIVQYEG*VGRTGK Trigger: TTTGCCTGTCCTGCCCACTCAGCCTTCATACTGAAC...AATGAATCTTTTTATGATAGCACAAGGACACTTTATTCCTAGAGAGCTGGTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR GCA 90 bp | ACTTCATCTGTTACGTACTTCACATTCTCTGCCATTTTCCACAGTAGGAAACCCCACTTTGAGAAAGACTaGCACCAAAGAGGAGACTCT | + |
|
Preference number: 2 (lower is better) Translates to: TSSVTYFTFSAIFHSRKPHFEKD*HQRGDS Trigger: AGAGTCTCCTCTTTGGTGGCAGTCTTTCTCAAAGTG...GGGTTTCCTACTGTGGAAAATGGCAGAGAATGTGAAGTACGTAACAGATGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR CCA 90 bp | TGGACCAGCTCTCTAGGAATAAAGTGTCCTTGTGCTATCATAAAAAGATTCATTAGTATGAAGGCTGAGTaGGCAGGACAGGCAAAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: WTSSLGIKCPCAIIKRFISMKAE*AGQAKH Trigger: GTGCTTTGCCTGTCCTGCCCACTCAGCCTTCATACT...AATGAATCTTTTTATGATAGCACAAGGACACTTTATTCCTAGAGAGCTGGTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR CCA 90 bp | CTGGTTAATCTGAAGCTATTCCTAACCACATATGCTATCTCTCAAACTGGGAGACCCAGGCATTTTGAGTaGGCAAGAAGACAAGGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: LVNLKLFLTTYAISQTGRPRHFE*ARRQGL Trigger: TAAGCCTTGTCTTCTTGCCCACTCAAAATGCCTGGG...TCTCCCAGTTTGAGAGATAGCATATGTGGTTAGGAATAGCTTCAGATTAACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR GCA 90 bp | CTGGTTAATCTGAAGCTATTCCTAACCACATATGCTATCTCTCAAACTGGGAGAAAACCCTACACAGTATaGTGTTCTGGAACATGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: LVNLKLFLTTYAISQTGRKPYTV*CSGTCS Trigger: ACTGCATGTTCCAGAACAGCATACTGTGTAGGGTTT...TCTCCCAGTTTGAGAGATAGCATATGTGGTTAGGAATAGCTTCAGATTAACCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR TCA 90 bp | CTGGTTAATCTGAAGCTATTCCTAACCACATATGCTATCTCTCAAACTGGGAGATCTGTAGATGGTACATaGGTAATAAAGCTGGCATTC | + |
|
Preference number: 2 (lower is better) Translates to: LVNLKLFLTTYAISQTGRSVDGT*VIKLAF Trigger: GAATGCCAGCTTTATTACTCATGTACCATCTACAGA...TCTCCCAGTTTGAGAGATAGCATATGTGGTTAGGAATAGCTTCAGATTAACCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR TCA 90 bp | TGGACCAGCTCTCTAGGAATAAAGTGTCCTTGTGCTATCATAAAAAGATTCATTGCTAAGAAAGCACTTTaGGAAAGACTGCCACCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: WTSSLGIKCPCAIIKRFIAKKAL*ERLPPK Trigger: CTTTGGTGGCAGTCTTTCTCAAAGTGCTTTCTTAGC...AATGAATCTTTTTATGATAGCACAAGGACACTTTATTCCTAGAGAGCTGGTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR TCA 90 bp | CTGGTTAATCTGAAGCTATTCCTAACCACATATGCTATCTCTCAAACTGGGAGAGTAAGCTGTTTGAAATaGGGATTGCTGTCATGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LVNLKLFLTTYAISQTGRVSCLK*GLLSCF Trigger: AAAGCATGACAGCAATCCTCATTTCAAACAGCTTAC...TCTCCCAGTTTGAGAGATAGCATATGTGGTTAGGAATAGCTTCAGATTAACCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR TCA 90 bp | TGGACCAGCTCTCTAGGAATAAAGTGTCCTTGTGCTATCATAAAAAGATTCATTGTGGGTCAAATGCCATaGCAAACTTCCTTTCACTAT | + |
|
Preference number: 2 (lower is better) Translates to: WTSSLGIKCPCAIIKRFIVGQMP*QTSFHY Trigger: ATAGTGAAAGGAAGTTTGTCATGGCATTTGACCCAC...AATGAATCTTTTTATGATAGCACAAGGACACTTTATTCCTAGAGAGCTGGTCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR CCA 90 bp | ACTTCATCTGTTACGTACTTCACATTCTCTGCCATTTTCCACAGTAGGAAACCCGAACATGCAGTGTTTTaGAAACAGTCATCCTTTATA | + |
|
Preference number: 2 (lower is better) Translates to: TSSVTYFTFSAIFHSRKPEHAVF*KQSSFI Trigger: TATAAAGGATGACTGTTTCCAAAACACTGCATGTTC...GGGTTTCCTACTGTGGAAAATGGCAGAGAATGTGAAGTACGTAACAGATGAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR CCA 72 bp | AGAGGAAGGAGGATCACTCCAAGTTCAAGGCCAGCCTaGCTGTACAGTAAGGTCTGGCCTAGCCAGGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: RGRRITPSSRPA*LYSKVWPSQGC Trigger: GCAGCCCTGGCTAGGCCAGACCTTACTGTACAGCCAGGCTGGCCTTGAACTTGGAGTGATCCTCCTTCCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR TCA 72 bp | CCAAGAGTCTGTCCAGGTCTGATCCATCGGGAGATTTaGAGGCCAACTAGGCACCTAGCTGAGCCTAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: PRVCPGLIHREI*RPTRHLAEPRA Trigger: TGCCCTAGGCTCAGCTAGGTGCCTAGTTGGCCTTCAAATCTCCCGATGGATCAGACCTGGACAGACTCTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR TCA 72 bp | GTCTGTCTGTGCTGGATGCTGGGCTGGAACTGCCCTTaGCACACATTCCTAGAGTTCAGTATGAAGGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: VCLCWMLGWNCP*HTFLEFSMKAE Trigger: CTCAGCCTTCATACTGAACTCTAGGAATGTGTGTCAAGGGCAGTTCCAGCCCAGCATCCAGCACAGACAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR TCA 72 bp | ATGACTCTGGACTCCCCGAATCTTTGGAAGCCTTCATaGGTCTTCCACTCTCTTCTGGGTACCGACGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: MTLDSPNLWKPS*VFHSLLGTDAE Trigger: CTCTGCGTCGGTACCCAGAAGAGAGTGGAAGACTCATGAAGGCTTCCAAAGATTCGGGGAGTCCAGAGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCCACAGTAGGAAACCCTGCTACCCGAAGCACAGAGGTACTGATAGCTCCCTTTAAAATGAACTTGTaGGAGGTGGTGGCCCAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: FSTVGNPATRSTEVLIAPFKMNL*EVVAQA Trigger: GGCCTGGGCCACCACCTCCAACAAGTTCATTTTAAA...GGGAGCTATCAGTACCTCTGTGCTTCGGGTAGCAGGGTTTCCTACTGTGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR TCA 72 bp | CCCTTGACACACATTCCTAGAGTTCAGTATGAAGGCTaGGTGGGCAGGACAGGCAAAGCACATTACTGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: PLTHIPRVQYEG*VGRTGKAHYWS Trigger: GCTCCAGTAATGTGCTTTGCCTGTCCTGCCCACTCAGCCTTCATACTGAACTCTAGGAATGTGTGTCAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR TCA 72 bp | AGGAGACTCTGGAAGCCTAGGCTGACGCACTCAAACTaGCAAAAGGAGACACCAGGATTTGGTTCTTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RRLWKPRLTHSN*QKETPGFGSSG Trigger: TCCTGAAGAACCAAATCCTGGTGTCTCCTTTTGTCAGTTTGAGTGCGTCAGCCTAGGCTTCCAGAGTCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR TCA 72 bp | CCTAGCACTAGGAAGACAGAGGCAGGCAGGTCTCTATaGGTTCAAGGTCAAGCTGGTCTACTTAGCAAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: PSTRKTEAGRSL*VQGQAGLLSKF Trigger: GAACTTGCTAAGTAGACCAGCTTGACCTTGAACTCATAGAGACCTGCCTGCCTCTGTCTTCCTAGTGCTAGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| 3UTR TCA 72 bp | TCAGAAACTAGAATTACAGATGGCTGTAAGCTGCCATaGAGCTGGGTCCTCTGGACCAGCAGACAGTGCACT | + |
|
Preference number: 3 (lower is better) Translates to: SETRITDGCKLP*SWVLWTSRQCT Trigger: AGTGCACTGTCTGCTGGTCCAGAGGACCCAGCTTCATGGCAGCTTACAGCCATCTGTAATTCTAGTTTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| 3UTR GCA 72 bp | TTTGAGTCTATTGGTATCCAGAATAGCCCTGAACTATaGTGGGTGTCTGTCTGTGCTGGATGCTGGGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: FESIGIQNSPEL*WVSVCAGCWAG Trigger: TCCAGCCCAGCATCCAGCACAGACAGACACCCAGCATAGTTCAGGGCTATTCTGGATACCAATAGACTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAGGAGCTAAGAAAGCACTTTGAGAAAGACTGCCACCAAAGAGGAGACTCTGGGCTGGAACTGCCCTaGACACACATTCCTAGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: FQELRKHFEKDCHQRGDSGLELP*THIPRV Trigger: AACTCTAGGAATGTGTGTCAAGGGCAGTTCCAGCCC...AGAGTCTCCTCTTTGGTGGCAGTCTTTCTCAAAGTGCTTTCTTAGCTCCTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR CAA 90 bp | GACAGAGGAAGGAGGATCACTCCAAGTTCAAGGCCAGCCTGGCTGTACAGTAAGAACTTCCTTTCACTATaGTGGCTGACAAAAGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: DRGRRITPSSRPAWLYSKNFLSL*WLTKVS Trigger: GCTCACTTTTGTCAGCCACAATAGTGAAAGGAAGTT...CTTACTGTACAGCCAGGCTGGCCTTGAACTTGGAGTGATCCTCCTTCCTCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCCACAGTAGGAAACCCTGCTACCCGAAGCACAGAGGTACTGATAGCTCCCTCATTTAAAATGAACTaGTTGGAGGTGGTGGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: FSTVGNPATRSTEVLIAPSFKMN*LEVVAQ Trigger: CTGGGCCACCACCTCCAACAAGTTCATTTTAAATGA...GGGAGCTATCAGTACCTCTGTGCTTCGGGTAGCAGGGTTTCCTACTGTGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR TCA 72 bp | AAAGCCGGATCTGCCTGGCTCCCATGGCCACTCAGGTaGAGATCTGGGCTTATATTAGACAGTAATTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: KAGSAWLPWPLR*RSGLILDSNFL Trigger: CAGAAAATTACTGTCTAATATAAGCCCAGATCTTCACCTGAGTGGCCATGGGAGCCAGGCAGATCCGGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR GCA 72 bp | TTCACATTCTCTGCCATTTTCCACAGTAGGAAACCCTaGTACCCGAAGCACAGAGGTACTGATAGCTCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: FTFSAIFHSRKP*YPKHRGTDSSL Trigger: AAGGGAGCTATCAGTACCTCTGTGCTTCGGGTAGCAGGGTTTCCTACTGTGGAAAATGGCAGAGAATGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGAGACACCAGGATTTGGTTCTTCAGGAAAAGGCGTGAGATGAAGCTCAAGTACGTCCCAGGCATTTaGAGTGGGCAAGAAGACAAG | + |
|
Preference number: 3 (lower is better) Translates to: KGDTRIWFFRKRREMKLKYVPGI*SGQEDK Trigger: CTTGTCTTCTTGCCCACTCAAAATGCCTGGGACGTA...CTTGAGCTTCATCTCACGCCTTTTCCTGAAGAACCAAATCCTGGTGTCTCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR CAA 90 bp | AGGACCAACTCCTGTAAGTTGTCCTCTGACTTCTGCACCTGCGCTGTAGCATACTCTCCATCTATAAAATaGGGCAAGATGTGGTGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: RTNSCKLSSDFCTCAVAYSPSIK*GKMWWY Trigger: GTACCACCACATCTTGCCCAATTTTATAGATGGAGA...GTATGCTACAGCGCAGGTGCAGAAGTCAGAGGACAACTTACAGGAGTTGGTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAAACAATTCAGGGGCAGGCAAGATGGCTCCGTGGGTTAAGGCACTTGCTGCCCTGCATATGTATTTTTaGTACCATGTGCACACAACA | + |
|
Preference number: 3 (lower is better) Translates to: ENNSGAGKMAPWVKALAALHMYF*YHVHTT Trigger: TGTTGTGTGCACATGGTACAAAAAATACATATGCAG...GGCAGCAAGTGCCTTAACCCACGGAGCCATCTTGCCTGCCCCTGAATTGTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTTCATCTGTTACGTACTTCACATTCTCTGCCATTTTCCACAGTAGGAAACCCGGGCTGGAACTGCCCTaGACACACATTCCTAGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: TSSVTYFTFSAIFHSRKPGLELP*THIPRV Trigger: AACTCTAGGAATGTGTGTCAAGGGCAGTTCCAGCCC...GGGTTTCCTACTGTGGAAAATGGCAGAGAATGTGAAGTACGTAACAGATGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAGGAGCTAAGAAAGCACTTTGAGAAAGACTGCCACCAAAGAGGAGACTCTGTTGATCCATTTGCTTaGACTCAGGACCCCAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: FQELRKHFEKDCHQRGDSVDPFA*TQDPSL Trigger: AAGACTGGGGTCCTGAGTCAAAGCAAATGGATCAAC...AGAGTCTCCTCTTTGGTGGCAGTCTTTCTCAAAGTGCTTTCTTAGCTCCTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCCACAGTAGGAAACCCTGCTACCCGAAGCACAGAGGTACTGATAGCTCCCGGAACATGCAGTGTTTaGGAAACAGTCATCCTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: FSTVGNPATRSTEVLIAPGTCSV*ETVILY Trigger: ATAAAGGATGACTGTTTCCAAAACACTGCATGTTCC...GGGAGCTATCAGTACCTCTGTGCTTCGGGTAGCAGGGTTTCCTACTGTGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR CAA 90 bp | GTACATCAGGAGGGACTACCAGGCAGAACCCCAGAGTCCTCTCAAAATGACTCTGGAACATGCAGTGTTTaGGAAACAGTCATCCTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: VHQEGLPGRTPESSQNDSGTCSV*ETVILY Trigger: ATAAAGGATGACTGTTTCCAAAACACTGCATGTTCC...AGAGTCATTTTGAGAGGACTCTGGGGTTCTGCCTGGTAGTCCCTCCTGATGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR TCA 72 bp | TTATTTTATGGCCTGTCCCTATCCCCCTGCTGGAGATaGATGTCGTGGGTCAAATGCCATGACAAACTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LFYGLSLSPCWR*MSWVKCHDKLP Trigger: AGGAAGTTTGTCATGGCATTTGACCCACGACATTCATCTCCAGCAGGGGGATAGGGACAGGCCATAAAATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR CCA 72 bp | GACGCACTCAAACTGACAAAAGGAGACACCAGGATTTaGTTCTTCAGGAAAAGGCGTGAGATGAAGCTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: DALKLTKGDTRI*FFRKRREMKLK Trigger: CTTGAGCTTCATCTCACGCCTTTTCCTGAAGAACCAAATCCTGGTGTCTCCTTTTGTCAGTTTGAGTGCGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGAGACACCAGGATTTGGTTCTTCAGGAAAAGGCGTGAGATGAAGCTCAAGGTCTTGCAACCACCTTaGAGTCTATTGGTATCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: KGDTRIWFFRKRREMKLKVLQPP*SLLVSR Trigger: TCTGGATACCAATAGACTCAAAGGTGGTTGCAAGAC...CTTGAGCTTCATCTCACGCCTTTTCCTGAAGAACCAAATCCTGGTGTCTCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAGGAGCTAAGAAAGCACTTTGAGAAAGACTGCCACCAAAGAGGAGACTCTGTCTTGCAACCACCTTaGAGTCTATTGGTATCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: FQELRKHFEKDCHQRGDSVLQPP*SLLVSR Trigger: TCTGGATACCAATAGACTCAAAGGTGGTTGCAAGAC...AGAGTCTCCTCTTTGGTGGCAGTCTTTCTCAAAGTGCTTTCTTAGCTCCTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR CAA 90 bp | AACTCCTGTAAGTTGTCCTCTGACTTCTGCACCTGCGCTGTAGCATACAGGTGCTCTCCAGGCCCAACTTaGCTATTTCCAATTATAAAT | + |
|
Preference number: 3 (lower is better) Translates to: NSCKLSSDFCTCAVAYRCSPGPT*LFPIIN Trigger: ATTTATAATTGGAAATAGCAAAGTTGGGCCTGGAGA...GCACCTGTATGCTACAGCGCAGGTGCAGAAGTCAGAGGACAACTTACAGGAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTAAGTTGTCCTCTGACTTCTGCACCTGCGCTGTAGCATACAGGTGCCCAACACTAGTAGTACAACTTTaGTCTGTCTTGTTTTCGAGA | + |
|
Preference number: 3 (lower is better) Translates to: CKLSSDFCTCAVAYRCPTLVVQL*SVLFSR Trigger: TCTCGAAAACAAGACAGACAAAAGTTGTACTACTAG...TGTTGGGCACCTGTATGCTACAGCGCAGGTGCAGAAGTCAGAGGACAACTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| 3UTR CCA 72 bp | GGGTCAAATGCCATGACAAACTTCCTTTCACTATTGTaGCTGACAAAAGTGAGCAGGGTTCTAGGCAAGATT | + |
|
Preference number: 3 (lower is better) Translates to: GSNAMTNFLSLL*LTKVSRVLGKI Trigger: AATCTTGCCTAGAACCCTGCTCACTTTTGTCAGCCACAATAGTGAAAGGAAGTTTGTCATGGCATTTGACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR CAA 90 bp | TGGACCAGCTCTCTAGGAATAAAGTGTCCTTGTGCTATCATAAAAAGATTCATTCTCAGGACCCCAGTCTaGCAACCACCTTTGAGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: WTSSLGIKCPCAIIKRFILRTPV*QPPLSL Trigger: TAGACTCAAAGGTGGTTGCAAGACTGGGGTCCTGAG...AATGAATCTTTTTATGATAGCACAAGGACACTTTATTCCTAGAGAGCTGGTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGAGACACCAGGATTTGGTTCTTCAGGAAAAGGCGTGAGATGAAGCTCAAGAGTCTAAAGTTGGTTTaGCTAAATGATACGTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: KGDTRIWFFRKRREMKLKSLKLV*LNDTSQ Trigger: CTGGGACGTATCATTTAGCAAAACCAACTTTAGACT...CTTGAGCTTCATCTCACGCCTTTTCCTGAAGAACCAAATCCTGGTGTCTCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR CAA 90 bp | TGGACCAGCTCTCTAGGAATAAAGTGTCCTTGTGCTATCATAAAAAGATTCATTTTTAAAATGAACTTGTaGGAGGTGGTGGCCCAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: WTSSLGIKCPCAIIKRFIFKMNL*EVVAQA Trigger: GGCCTGGGCCACCACCTCCAACAAGTTCATTTTAAA...AATGAATCTTTTTATGATAGCACAAGGACACTTTATTCCTAGAGAGCTGGTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR CCA 72 bp | CCTACACAGTATGCTGTTCTGGAACATGCAGTGTTTTaGAAACAGTCATCCTTTATAAAGATGCAGTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: PTQYAVLEHAVF*KQSSFIKMQCS Trigger: AGAGCACTGCATCTTTATAAAGGATGACTGTTTCCAAAACACTGCATGTTCCAGAACAGCATACTGTGTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR CAA 90 bp | TGGACCAGCTCTCTAGGAATAAAGTGTCCTTGTGCTATCATAAAAAGATTCATTGTTGATCCATTTGCTTaGACTCAGGACCCCAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: WTSSLGIKCPCAIIKRFIVDPFA*TQDPSL Trigger: AAGACTGGGGTCCTGAGTCAAAGCAAATGGATCAAC...AATGAATCTTTTTATGATAGCACAAGGACACTTTATTCCTAGAGAGCTGGTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR CAA 90 bp | ACTTCATCTGTTACGTACTTCACATTCTCTGCCATTTTCCACAGTAGGAAACCCAAAATGAGACTGTGCTaGACAAAGGGAAGAGTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: TSSVTYFTFSAIFHSRKPKMRLC*TKGRVN Trigger: ATTTACTCTTCCCTTTGTCAAGCACAGTCTCATTTT...GGGTTTCCTACTGTGGAAAATGGCAGAGAATGTGAAGTACGTAACAGATGAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR CAA 90 bp | TGGACCAGCTCTCTAGGAATAAAGTGTCCTTGTGCTATCATAAAAAGATTCATTAACTTCCTTTCACTATaGTGGCTGACAAAAGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: WTSSLGIKCPCAIIKRFINFLSL*WLTKVS Trigger: GCTCACTTTTGTCAGCCACAATAGTGAAAGGAAGTT...AATGAATCTTTTTATGATAGCACAAGGACACTTTATTCCTAGAGAGCTGGTCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR CAA 90 bp | CCACCAGATGCCACTATTGTTTCACTGAGAAGACTCAAATATTCAGTAGGTCTTCAACTTTTGTCTGTCTaGTTTTCGAGACATGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: PPDATIVSLRRLKYSVGLQLLSV*FSRHGF Trigger: AAAACCATGTCTCGAAAACAAGACAGACAAAAGTTG...AAGACCTACTGAATATTTGAGTCTTCTCAGTGAAACAATAGTGGCATCTGGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| 3UTR GCA 72 bp | ATCAGTTACTATACTGAGTACCTATGTGGAATAAATTaGACTGGGCTAGGAAAGAAAAGGTCTGTGGTTACT | + |
|
Preference number: 3 (lower is better) Translates to: ISYYTEYLCGIN*TGLGKKRSVVT Trigger: AGTAACCACAGACCTTTTCTTTCCTAGCCCAGTGCAATTTATTCCACATAGGTACTCAGTATAGTAACTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| 3UTR CCA 72 bp | TTAACTTCTCCATCTATAAAATTGGGCAAGATGTGGTaGTACATGTCTTTTATCCTAGCACTAGGAAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: LTSPSIKLGKMW*YMSFILALGRQ Trigger: CTGTCTTCCTAGTGCTAGGATAAAAGACATGTACCACCACATCTTGCCCAATTTTATAGATGGAGAAGTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGACCAGCTCTCTAGGAATAAAGTGTCCTTGTGCTATCATAAAAAGATTCATTAGTCTAAAGTTGGTTTaGCTAAATGATACGTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: WTSSLGIKCPCAIIKRFISLKLV*LNDTSQ Trigger: CTGGGACGTATCATTTAGCAAAACCAACTTTAGACT...AATGAATCTTTTTATGATAGCACAAGGACACTTTATTCCTAGAGAGCTGGTCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR TCA 72 bp | AGTTGCCTGATGCTACATTCAGTAAGCTGTTTGAAATaGGGATTGCTGTCATGCTTTGATACAATTTGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SCLMLHSVSCLK*GLLSCFDTICK Trigger: TTTGCAAATTGTATCAAAGCATGACAGCAATCCTCATTTCAAACAGCTTACTGAATGTAGCATCAGGCAACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR-3UTR CAA 90 bp | TGGACCAGCTCTCTAGGAATAAAGTGTCCTTGTGCTATCATAAAAAGATTCATTGATGAGCATCAACATTaGAAGTGTGAAATACAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: WTSSLGIKCPCAIIKRFIDEHQH*KCEIQS Trigger: AGACTGTATTTCACACTTCAAATGTTGATGCTCATC...AATGAATCTTTTTATGATAGCACAAGGACACTTTATTCCTAGAGAGCTGGTCCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR GCA 72 bp | GTGTTTTGGAAACAGTCATCCTTTATAAAGATGCAGTaGTCTCAAACCATCTTAGAACCAATGATGATTTTA | + |
|
Preference number: 3 (lower is better) Translates to: VFWKQSSFIKMQ*SQTILEPMMIL Trigger: TAAAATCATCATTGGTTCTAAGATGGTTTGAGAGCACTGCATCTTTATAAAGGATGACTGTTTCCAAAACAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | ATTCAGGGGCAGGCAAGATGGCTCCGTGGGTTAAGGCACTTGCTGCCAAGCCCGCCCAGGGCAGGCCCTTaGGAAAGGCTACCCGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IQGQARWLRGLRHLLPSPPRAGP*ERLPGQ Trigger: CTGACCGGGTAGCCTTTCCCAAGGGCCTGCCCTGGG...CGGGCTTGGCAGCAAGTGCCTTAACCCACGGAGCCATCTTGCCTGCCCCTGAAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR GCA 90 bp | GGCAAGATGGCTCCGTGGGTTAAGGCACTTGCTGCCAAGCCCGAGGACCTCAGTACTCCCGCCGCTGGTTaGGGAACGTTTCCCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GKMAPWVKALAAKPEDLSTPAAG*GTFPCP Trigger: AGGGCAGGGAAACGTTCCGCAACCAGCGGCGGGAGT...ACTGAGGTCCTCGGGCTTGGCAGCAAGTGCCTTAACCCACGGAGCCATCTTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR CCA 90 bp | GTACATCAGGAGGGACTACCAGGCAGAACCCCAGAGTCCTCTCAAAATGACTCTGGCGTCCCCGCAGCTTaGAGGGTGGAGGAGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VHQEGLPGRTPESSQNDSGVPAA*RVEEPA Trigger: AGCTGGCTCCTCCACCCTCCAAGCTGCGGGGACGCC...AGAGTCATTTTGAGAGGACTCTGGGGTTCTGCCTGGTAGTCCCTCCTGATGTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | GACAGAGGAAGGAGGATCACTCCAAGTTCAAGGCCAGCCTGGCTGTACAGTAAGTCCGACTCCCGCCGCTaGTTGCGGAACGTTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DRGRRITPSSRPAWLYSKSDSRR*LRNVSL Trigger: CAGGGAAACGTTCCGCAACCAGCGGCGGGAGTCGGA...CTTACTGTACAGCCAGGCTGGCCTTGAACTTGGAGTGATCCTCCTTCCTCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | GTACATCAGGAGGGACTACCAGGCAGAACCCCAGAGTCCTCTCAAAATGACTCTCCCAGGGCAGGCCCTTaGGAAAGGCTACCCGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VHQEGLPGRTPESSQNDSPRAGP*ERLPGQ Trigger: CTGACCGGGTAGCCTTTCCCAAGGGCCTGCCCTGGG...AGAGTCATTTTGAGAGGACTCTGGGGTTCTGCCTGGTAGTCCCTCCTGATGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | GGCAAGATGGCTCCGTGGGTTAAGGCACTTGCTGCCAAGCCCGAGGACCTCAGTATGTCCAGGCTGTCTTaGTTGGTGAGGAGTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GKMAPWVKALAAKPEDLSMSRLS*LVRSCL Trigger: AAGGCAACTCCTCACCAAGCAAGACAGCCTGGACAT...ACTGAGGTCCTCGGGCTTGGCAGCAAGTGCCTTAACCCACGGAGCCATCTTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| 3UTR CAA 72 bp | GTTAAGGCACTTGCTGCCAAGCCCGAGGACCTCAGTTaGATCCCTGGAATCCCTGTGGTGGAAGGAGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VKALAAKPEDLS*IPGIPVVEGED Trigger: GTCCTCTCCTTCCACCACAGGGATTCCAGGGATCAAACTGAGGTCCTCGGGCTTGGCAGCAAGTGCCTTAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR TCA 90 bp | ATTCAGGGGCAGGCAAGATGGCTCCGTGGGTTAAGGCACTTGCTGCCAAGCCCGTGCTGCATGCCCGTCTaGATCTCCATATTCAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: IQGQARWLRGLRHLLPSPCCMPV*ISIFKL Trigger: GAGTTTGAATATGGAGATTCAGACGGGCATGCAGCA...CGGGCTTGGCAGCAAGTGCCTTAACCCACGGAGCCATCTTGCCTGCCCCTGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR TCA 90 bp | GTACATCAGGAGGGACTACCAGGCAGAACCCCAGAGTCCTCTCAAAATGACTCTGGTGGAGGAGCCAGCTaGGACTCCCCCAGATCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VHQEGLPGRTPESSQNDSGGGAS*DSPRSR Trigger: TCTTGATCTGGGGGAGTCTCAGCTGGCTCCTCCACC...AGAGTCATTTTGAGAGGACTCTGGGGTTCTGCCTGGTAGTCCCTCCTGATGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR TCA 90 bp | AGGACCAACTCCTGTAAGTTGTCCTCTGACTTCTGCACCTGCGCTGTAGCATACGGTGGAGGAGCCAGCTaGGACTCCCCCAGATCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RTNSCKLSSDFCTCAVAYGGGAS*DSPRSR Trigger: TCTTGATCTGGGGGAGTCTCAGCTGGCTCCTCCACC...GTATGCTACAGCGCAGGTGCAGAAGTCAGAGGACAACTTACAGGAGTTGGTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCCACAGTAGGAAACCCTGCTACCCGAAGCACAGAGGTACTGATAGCTCCCGGTGGAGGAGCCAGCTaGGACTCCCCCAGATCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSTVGNPATRSTEVLIAPGGGAS*DSPRSR Trigger: TCTTGATCTGGGGGAGTCTCAGCTGGCTCCTCCACC...GGGAGCTATCAGTACCTCTGTGCTTCGGGTAGCAGGGTTTCCTACTGTGGAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | GTACATCAGGAGGGACTACCAGGCAGAACCCCAGAGTCCTCTCAAAATGACTCTGGCAGATCTAGCCTCTaGCCCAGCACGCTCTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VHQEGLPGRTPESSQNDSGRSSL*PSTLCK Trigger: CTTGCAGAGCGTGCTGGGGCAGAGGCTAGATCTGCC...AGAGTCATTTTGAGAGGACTCTGGGGTTCTGCCTGGTAGTCCCTCCTGATGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | TGCTGCCAAGCCCGAGGACCTCAGTTTGATCCCTGGAATCCCTGTGGTGGAAGGCAGTGCTGTCAGCAATaGAGACAGCTGGTTTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: CCQARGPQFDPWNPCGGRQCCQQ*RQLVSE Trigger: TTCGGAAACCAGCTGTCTCCATTGCTGACAGCACTG...CCTTCCACCACAGGGATTCCAGGGATCAAACTGAGGTCCTCGGGCTTGGCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR TCA 90 bp | ATTCAGGGGCAGGCAAGATGGCTCCGTGGGTTAAGGCACTTGCTGCCAAGCCCGTGTATTTTGAGAGCCTaGAGGTGCTCAAATCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: IQGQARWLRGLRHLLPSPCILRA*RCSNPP Trigger: TGGTGGATTTGAGCACCTTCAGGCTCTCAAAATACA...CGGGCTTGGCAGCAAGTGCCTTAACCCACGGAGCCATCTTGCCTGCCCCTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGCCAAGCCCGAGGACCTCAGTTTGATCCCTGGAATCCCTGTGGTGGAAGGCACGCTTCTGTATTTTaGGAGCCTGAAGGTGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: CCQARGPQFDPWNPCGGRHASVF*EPEGAQ Trigger: TTGAGCACCTTCAGGCTCTCAAAATACAGAAGCGTG...CCTTCCACCACAGGGATTCCAGGGATCAAACTGAGGTCCTCGGGCTTGGCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR TCA 90 bp | GTACATCAGGAGGGACTACCAGGCAGAACCCCAGAGTCCTCTCAAAATGACTCTCCAGCAGATGGGCTGTaGGAACACCTCTCTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VHQEGLPGRTPESSQNDSPADGL*EHLSLQ Trigger: CTGGAGAGAGAGGTGTTCTCACAGCCCATCTGCTGG...AGAGTCATTTTGAGAGGACTCTGGGGTTCTGCCTGGTAGTCCCTCCTGATGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | GACCTCAGTTTGATCCCTGGAATCCCTGTGGTGGAAGGAGAGGACCAACTCCTGCTTGGAGGTGGGAGCTaGAGCCAGCAGAATCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: DLSLIPGIPVVEGEDQLLLGGGS*SQQNLK Trigger: CTTAAGATTCTGCTGGCTGCAGCTCCCACCTCCAAG...CAGGAGTTGGTCCTCTCCTTCCACCACAGGGATTCCAGGGATCAAACTGAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR GCA 90 bp | GGCAAGATGGCTCCGTGGGTTAAGGCACTTGCTGCCAAGCCCGAGGACCTCAGTCAATGCCTAGCTTCATaGTCTGGAGAACAGTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: GKMAPWVKALAAKPEDLSQCLAS*SGEQLQ Trigger: CTGTAACTGTTCTCCAGAGCATGAAGCTAGGCATTG...ACTGAGGTCCTCGGGCTTGGCAGCAAGTGCCTTAACCCACGGAGCCATCTTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR CCA 90 bp | GAAAACAATTCAGGGGCAGGCAAGATGGCTCCGTGGGTTAAGGCACTTGCTGCCTTCTTTATTGGAAAGTaGGGGGCCAGGCCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ENNSGAGKMAPWVKALAAFFIGK*GARPLQ Trigger: CTGCAGTGGCCTGGCCCCCCACTTTCCAATAAAGAA...GGCAGCAAGTGCCTTAACCCACGGAGCCATCTTGCCTGCCCCTGAATTGTTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGAGACACCAGGATTTGGTTCTTCAGGAAAAGGCGTGAGATGAAGCTCAAGCCCAGGGCAGGCCCTTaGGAAAGGCTACCCGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KGDTRIWFFRKRREMKLKPRAGP*ERLPGQ Trigger: CTGACCGGGTAGCCTTTCCCAAGGGCCTGCCCTGGG...CTTGAGCTTCATCTCACGCCTTTTCCTGAAGAACCAAATCCTGGTGTCTCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | TGCTGCCAAGCCCGAGGACCTCAGTTTGATCCCTGGAATCCCTGTGGTGGAAGGTTCACTCGGTGTTTCTaGTACCACCTCTTCTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CCQARGPQFDPWNPCGGRFTRCF*YHLFSQ Trigger: TTGGGAGAAGAGGTGGTACCAGAAACACCGAGTGAA...CCTTCCACCACAGGGATTCCAGGGATCAAACTGAGGTCCTCGGGCTTGGCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGCCAAGCCCGAGGACCTCAGTTTGATCCCTGGAATCCCTGTGGTGGAAGGCCTAGCTTCATGCTCTaGAGAACAGTTACAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: CCQARGPQFDPWNPCGGRPSFML*RTVTGI Trigger: GATGCCTGTAACTGTTCTCCAGAGCATGAAGCTAGG...CCTTCCACCACAGGGATTCCAGGGATCAAACTGAGGTCCTCGGGCTTGGCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR TCA 90 bp | TGTAAGTTGTCCTCTGACTTCTGCACCTGCGCTGTAGCATACAGGTGCCCAACACACTCAGCAGTACCCTaGGCTCAGTGCTGTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CKLSSDFCTCAVAYRCPTHSAVP*AQCCQQ Trigger: TTGCTGACAGCACTGAGCTCAGGGTACTGCTGAGTG...TGTTGGGCACCTGTATGCTACAGCGCAGGTGCAGAAGTCAGAGGACAACTTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR GCA 90 bp | AAAGGAGACACCAGGATTTGGTTCTTCAGGAAAAGGCGTGAGATGAAGCTCAAGACTCCCGCCGCTGGTTaGGGAACGTTTCCCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KGDTRIWFFRKRREMKLKTPAAG*GTFPCP Trigger: AGGGCAGGGAAACGTTCCGCAACCAGCGGCGGGAGT...CTTGAGCTTCATCTCACGCCTTTTCCTGAAGAACCAAATCCTGGTGTCTCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | TGCTGCCAAGCCCGAGGACCTCAGTTTGATCCCTGGAATCCCTGTGGTGGAAGGGGAAAACAGCAGGAGTaGAAACGGCTCTTCATTATG | + |
|
Preference number: 4 (lower is better) Translates to: CCQARGPQFDPWNPCGGRGKQQE*KRLFIM Trigger: CATAATGAAGAGCCGTTTGCACTCCTGCTGTTTTCC...CCTTCCACCACAGGGATTCCAGGGATCAAACTGAGGTCCTCGGGCTTGGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAGGAGCTAAGAAAGCACTTTGAGAAAGACTGCCACCAAAGAGGAGACTCTTCCGACTCCCGCCGCTaGTTGCGGAACGTTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FQELRKHFEKDCHQRGDSSDSRR*LRNVSL Trigger: CAGGGAAACGTTCCGCAACCAGCGGCGGGAGTCGGA...AGAGTCTCCTCTTTGGTGGCAGTCTTTCTCAAAGTGCTTTCTTAGCTCCTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | TGCTGCCAAGCCCGAGGACCTCAGTTTGATCCCTGGAATCCCTGTGGTGGAAGGGGAAGCAATTGTATCTaGACCAGTGTAGCACATCGA | + |
|
Preference number: 4 (lower is better) Translates to: CCQARGPQFDPWNPCGGRGSNCI*TSVAHR Trigger: TCGATGTGCTACACTGGTCCAGATACAATTGCTTCC...CCTTCCACCACAGGGATTCCAGGGATCAAACTGAGGTCCTCGGGCTTGGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR CCA 90 bp | GACAGAGGAAGGAGGATCACTCCAAGTTCAAGGCCAGCCTGGCTGTACAGTAAGTTCTTTATTGGAAAGTaGGGGGCCAGGCCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DRGRRITPSSRPAWLYSKFFIGK*GARPLQ Trigger: CTGCAGTGGCCTGGCCCCCCACTTTCCAATAAAGAA...CTTACTGTACAGCCAGGCTGGCCTTGAACTTGGAGTGATCCTCCTTCCTCTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | GACAGAGGAAGGAGGATCACTCCAAGTTCAAGGCCAGCCTGGCTGTACAGTAAGTTCCTCCAGCAGAACTaGCTATTGTCTCCGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DRGRRITPSSRPAWLYSKFLQQN*LLSPAS Trigger: GGAAGCCGGAGACAATAGCCAGTTCTGCTGGAGGAA...CTTACTGTACAGCCAGGCTGGCCTTGAACTTGGAGTGATCCTCCTTCCTCTGTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR TCA 90 bp | GGCAAGATGGCTCCGTGGGTTAAGGCACTTGCTGCCAAGCCCGAGGACCTCAGTTTAGTGTCTTGCACTTaGGTCCTGAAATCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GKMAPWVKALAAKPEDLSLVSCT*VLKSSS Trigger: TGAAGAAGATTTCAGGACTCAAGTGCAAGACACTAA...ACTGAGGTCCTCGGGCTTGGCAGCAAGTGCCTTAACCCACGGAGCCATCTTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR GCA 90 bp | CGTGGGTCAAATGCCATGACAAACTTCCTTTCACTATTGTGGCTGACAAAAGTGACTCCCGCCGCTGGTTaGGGAACGTTTCCCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RGSNAMTNFLSLLWLTKVTPAAG*GTFPCP Trigger: AGGGCAGGGAAACGTTCCGCAACCAGCGGCGGGAGT...CACTTTTGTCAGCCACAATAGTGAAAGGAAGTTTGTCATGGCATTTGACCCACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | GACCTCAGTTTGATCCCTGGAATCCCTGTGGTGGAAGGAGAGGACCAACTCCTGAAGGTATCTGTGTCCTaGCCCAGAGTGAATCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: DLSLIPGIPVVEGEDQLLKVSVS*PRVNPM Trigger: CATTGGATTCACTCTGGGGCAGGACACAGATACCTT...CAGGAGTTGGTCCTCTCCTTCCACCACAGGGATTCCAGGGATCAAACTGAGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR GCA 90 bp | AACTCCTGTAAGTTGTCCTCTGACTTCTGCACCTGCGCTGTAGCATACAGGTGCGCAAATCCTGGATGGTaGAGCACGGGTAATCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NSCKLSSDFCTCAVAYRCANPGW*STGNPA Trigger: TGCTGGATTACCCGTGCTGCACCATCCAGGATTTGC...GCACCTGTATGCTACAGCGCAGGTGCAGAAGTCAGAGGACAACTTACAGGAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR CCA 90 bp | GACAGAGGAAGGAGGATCACTCCAAGTTCAAGGCCAGCCTGGCTGTACAGTAAGTTGTCGATTTCCATGTaGAGTAGCTCCAGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DRGRRITPSSRPAWLYSKLSISM*SSSRKA Trigger: GGCCTTCCTGGAGCTACTCCACATGGAAATCGACAA...CTTACTGTACAGCCAGGCTGGCCTTGAACTTGGAGTGATCCTCCTTCCTCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | CCACCAGATGCCACTATTGTTTCACTGAGAAGACTCAAATATTCAGTAGGTCTTGGCGTCCCCGCAGCTTaGAGGGTGGAGGAGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPDATIVSLRRLKYSVGLGVPAA*RVEEPA Trigger: AGCTGGCTCCTCCACCCTCCAAGCTGCGGGGACGCC...AAGACCTACTGAATATTTGAGTCTTCTCAGTGAAACAATAGTGGCATCTGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR CCA 90 bp | GACAGAGGAAGGAGGATCACTCCAAGTTCAAGGCCAGCCTGGCTGTACAGTAAGTTCCTCCTCTGTGGCTaGTTCCTCAGTCTTGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DRGRRITPSSRPAWLYSKFLLCG*FLSLEE Trigger: CTCTTCAAGACTGAGGAACCAGCCACAGAGGAGGAA...CTTACTGTACAGCCAGGCTGGCCTTGAACTTGGAGTGATCCTCCTTCCTCTGTC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | TGCTGCCAAGCCCGAGGACCTCAGTTTGATCCCTGGAATCCCTGTGGTGGAAGGTCAAGGGGATGCAGTTaGCAAACACTAAATGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CCQARGPQFDPWNPCGGRSRGCS*QTLNVV Trigger: CACAACATTTAGTGTTTGCCAACTGCATCCCCTTGA...CCTTCCACCACAGGGATTCCAGGGATCAAACTGAGGTCCTCGGGCTTGGCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR CCA 90 bp | AGGACCAACTCCTGTAAGTTGTCCTCTGACTTCTGCACCTGCGCTGTAGCATACCTGGCAAATCCTGGATaGTGCAGCACGGGTAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: RTNSCKLSSDFCTCAVAYLANPG*CSTGNP Trigger: TGGATTACCCGTGCTGCACCATCCAGGATTTGCCAG...GTATGCTACAGCGCAGGTGCAGAAGTCAGAGGACAACTTACAGGAGTTGGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR CCA 90 bp | GTACATCAGGAGGGACTACCAGGCAGAACCCCAGAGTCCTCTCAAAATGACTCTCTGGCAAATCCTGGATaGTGCAGCACGGGTAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VHQEGLPGRTPESSQNDSLANPG*CSTGNP Trigger: TGGATTACCCGTGCTGCACCATCCAGGATTTGCCAG...AGAGTCATTTTGAGAGGACTCTGGGGTTCTGCCTGGTAGTCCCTCCTGATGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | TTTTCCACAGTAGGAAACCCTGCTACCCGAAGCACAGAGGTACTGATAGCTCCCTTCCTCCAGCAGAACTaGCTATTGTCTCCGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSTVGNPATRSTEVLIAPFLQQN*LLSPAS Trigger: GGAAGCCGGAGACAATAGCCAGTTCTGCTGGAGGAA...GGGAGCTATCAGTACCTCTGTGCTTCGGGTAGCAGGGTTTCCTACTGTGGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR TCA 90 bp | GACAGAGGAAGGAGGATCACTCCAAGTTCAAGGCCAGCCTGGCTGTACAGTAAGTGCTGCATGCCCGTCTaGATCTCCATATTCAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: DRGRRITPSSRPAWLYSKCCMPV*ISIFKL Trigger: GAGTTTGAATATGGAGATTCAGACGGGCATGCAGCA...CTTACTGTACAGCCAGGCTGGCCTTGAACTTGGAGTGATCCTCCTTCCTCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | ATCCTAGCACTAGGAAGACAGAGGCAGGCAGGTCTCTATGAGTTCAAGGTCAAGGGGAGGCAGCACGCATaGTCTTTACAACCTGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: ILALGRQRQAGLYEFKVKGRQHA*SLQPGY Trigger: GTATCCAGGTTGTAAAGAGCATGCGTGCTGCCTCCC...CTTGACCTTGAACTCATAGAGACCTGCCTGCCTCTGTCTTCCTAGTGCTAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR GCA 90 bp | GACAGAGGAAGGAGGATCACTCCAAGTTCAAGGCCAGCCTGGCTGTACAGTAAGGTCTGTTCACGTCAATaGCTAGCTTCATGCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DRGRRITPSSRPAWLYSKVCSRQ*LASCSG Trigger: TCCAGAGCATGAAGCTAGGCATTGACGTGAACAGAC...CTTACTGTACAGCCAGGCTGGCCTTGAACTTGGAGTGATCCTCCTTCCTCTGTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | CGTGGGTCAAATGCCATGACAAACTTCCTTTCACTATTGTGGCTGACAAAAGTGGGCAGATCTAGCCTCTaGCCCAGCACGCTCTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RGSNAMTNFLSLLWLTKVGRSSL*PSTLCK Trigger: CTTGCAGAGCGTGCTGGGGCAGAGGCTAGATCTGCC...CACTTTTGTCAGCCACAATAGTGAAAGGAAGTTTGTCATGGCATTTGACCCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | AGGACCAACTCCTGTAAGTTGTCCTCTGACTTCTGCACCTGCGCTGTAGCATACTTGTCGATTTCCATGTaGAGTAGCTCCAGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RTNSCKLSSDFCTCAVAYLSISM*SSSRKA Trigger: GGCCTTCCTGGAGCTACTCCACATGGAAATCGACAA...GTATGCTACAGCGCAGGTGCAGAAGTCAGAGGACAACTTACAGGAGTTGGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR CCA 90 bp | GTACATCAGGAGGGACTACCAGGCAGAACCCCAGAGTCCTCTCAAAATGACTCTAGCAATGGAGACAGCTaGTTTCCGAAGGGCACTACT | + |
|
Preference number: 4 (lower is better) Translates to: VHQEGLPGRTPESSQNDSSNGDS*FPKGTT Trigger: AGTAGTGCCCTTCGGAAACCAGCTGTCTCCATTGCT...AGAGTCATTTTGAGAGGACTCTGGGGTTCTGCCTGGTAGTCCCTCCTGATGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | TTTTCCACAGTAGGAAACCCTGCTACCCGAAGCACAGAGGTACTGATAGCTCCCCAGTGCTGTCAGCAATaGAGACAGCTGGTTTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSTVGNPATRSTEVLIAPQCCQQ*RQLVSE Trigger: TTCGGAAACCAGCTGTCTCCATTGCTGACAGCACTG...GGGAGCTATCAGTACCTCTGTGCTTCGGGTAGCAGGGTTTCCTACTGTGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | TTTTCCACAGTAGGAAACCCTGCTACCCGAAGCACAGAGGTACTGATAGCTCCCGGAAGTCCCATGGTCTaGCATCGATGTCATTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSTVGNPATRSTEVLIAPGSPMV*HRCHSH Trigger: ATGGGAATGACATCGATGCCAGACCATGGGACTTCC...GGGAGCTATCAGTACCTCTGTGCTTCGGGTAGCAGGGTTTCCTACTGTGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | GACAGAGGAAGGAGGATCACTCCAAGTTCAAGGCCAGCCTGGCTGTACAGTAAGTGCTTGGAAGTCCCATaGTCTGGCATCGATGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: DRGRRITPSSRPAWLYSKCLEVP*SGIDVI Trigger: AATGACATCGATGCCAGACCATGGGACTTCCAAGCA...CTTACTGTACAGCCAGGCTGGCCTTGAACTTGGAGTGATCCTCCTTCCTCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR TCA 90 bp | GTACATCAGGAGGGACTACCAGGCAGAACCCCAGAGTCCTCTCAAAATGACTCTTGCTGCATGCCCGTCTaGATCTCCATATTCAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: VHQEGLPGRTPESSQNDSCCMPV*ISIFKL Trigger: GAGTTTGAATATGGAGATTCAGACGGGCATGCAGCA...AGAGTCATTTTGAGAGGACTCTGGGGTTCTGCCTGGTAGTCCCTCCTGATGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | GTACATCAGGAGGGACTACCAGGCAGAACCCCAGAGTCCTCTCAAAATGACTCTAAGGTATCTGTGTCCTaGCCCAGAGTGAATCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: VHQEGLPGRTPESSQNDSKVSVS*PRVNPM Trigger: CATTGGATTCACTCTGGGGCAGGACACAGATACCTT...AGAGTCATTTTGAGAGGACTCTGGGGTTCTGCCTGGTAGTCCCTCCTGATGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | CCACCAGATGCCACTATTGTTTCACTGAGAAGACTCAAATATTCAGTAGGTCTTTCCGACTCCCGCCGCTaGTTGCGGAACGTTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PPDATIVSLRRLKYSVGLSDSRR*LRNVSL Trigger: CAGGGAAACGTTCCGCAACCAGCGGCGGGAGTCGGA...AAGACCTACTGAATATTTGAGTCTTCTCAGTGAAACAATAGTGGCATCTGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR CCA 90 bp | GACAGAGGAAGGAGGATCACTCCAAGTTCAAGGCCAGCCTGGCTGTACAGTAAGGGAAGCAATTGTATCTaGACCAGTGTAGCACATCGA | + |
|
Preference number: 4 (lower is better) Translates to: DRGRRITPSSRPAWLYSKGSNCI*TSVAHR Trigger: TCGATGTGCTACACTGGTCCAGATACAATTGCTTCC...CTTACTGTACAGCCAGGCTGGCCTTGAACTTGGAGTGATCCTCCTTCCTCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | TGGACCAGCTCTCTAGGAATAAAGTGTCCTTGTGCTATCATAAAAAGATTCATTGGCGTCCCCGCAGCTTaGAGGGTGGAGGAGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WTSSLGIKCPCAIIKRFIGVPAA*RVEEPA Trigger: AGCTGGCTCCTCCACCCTCCAAGCTGCGGGGACGCC...AATGAATCTTTTTATGATAGCACAAGGACACTTTATTCCTAGAGAGCTGGTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | AACTCCTGTAAGTTGTCCTCTGACTTCTGCACCTGCGCTGTAGCATACAGGTGCTCACACTCTCATGGATaGGTCGAGGTAATCCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: NSCKLSSDFCTCAVAYRCSHSHG*VEVIQP Trigger: TGGTTGGATTACCTCGACCCATCCATGAGAGTGTGA...GCACCTGTATGCTACAGCGCAGGTGCAGAAGTCAGAGGACAACTTACAGGAGTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR CCA 90 bp | AGGACCAACTCCTGTAAGTTGTCCTCTGACTTCTGCACCTGCGCTGTAGCATACGTCTTCACACTCTCATaGATGGGTCGAGGTAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: RTNSCKLSSDFCTCAVAYVFTLS*MGRGNP Trigger: TGGATTACCTCGACCCATCCATGAGAGTGTGAAGAC...GTATGCTACAGCGCAGGTGCAGAAGTCAGAGGACAACTTACAGGAGTTGGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR CCA 90 bp | GTACATCAGGAGGGACTACCAGGCAGAACCCCAGAGTCCTCTCAAAATGACTCTTTCACTCGGTGTTTCTaGTACCACCTCTTCTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VHQEGLPGRTPESSQNDSFTRCF*YHLFSQ Trigger: TTGGGAGAAGAGGTGGTACCAGAAACACCGAGTGAA...AGAGTCATTTTGAGAGGACTCTGGGGTTCTGCCTGGTAGTCCCTCCTGATGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | TTTTCCACAGTAGGAAACCCTGCTACCCGAAGCACAGAGGTACTGATAGCTCCCCCTAGCTTCATGCTCTaGAGAACAGTTACAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: FSTVGNPATRSTEVLIAPPSFML*RTVTGI Trigger: GATGCCTGTAACTGTTCTCCAGAGCATGAAGCTAGG...GGGAGCTATCAGTACCTCTGTGCTTCGGGTAGCAGGGTTTCCTACTGTGGAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| CDS-3UTR CCA 90 bp | GTACATCAGGAGGGACTACCAGGCAGAACCCCAGAGTCCTCTCAAAATGACTCTGGCGCCCAAGGTACTTaGTCTGTATCTTTAGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VHQEGLPGRTPESSQNDSGAQGT*SVSLVA Trigger: TGCTACTAAAGATACAGACCAAGTACCTTGGGCGCC...AGAGTCATTTTGAGAGGACTCTGGGGTTCTGCCTGGTAGTCCCTCCTGATGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151738.4 |
||
| 3UTR CAA 72 bp | CTCAGGACCCCAGTCTTGCAACCACCTTTGAGTCTATaGGTATCCAGAATAGCCCTGAACTATGCTGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LRTPVLQPPLSL*VSRIALNYAGC Trigger: ACACCCAGCATAGTTCAGGGCTATTCTGGATACCAATAGACTCAAAGGTGGTTGCAAGACTGGGGTCCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| CDS-3UTR TCA 90 bp | GTACATCAGGAGGGACTACCAGGCAGAACCCCAGAGTCCTCTCAAAATGACTCTTGTATTTTGAGAGCCTaGAGGTGCTCAAATCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VHQEGLPGRTPESSQNDSCILRA*RCSNPP Trigger: TGGTGGATTTGAGCACCTTCAGGCTCTCAAAATACA...AGAGTCATTTTGAGAGGACTCTGGGGTTCTGCCTGGTAGTCCCTCCTGATGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| CDS-3UTR TCA 90 bp | TTTTCCACAGTAGGAAACCCTGCTACCCGAAGCACAGAGGTACTGATAGCTCCCTGTATTTTGAGAGCCTaGAGGTGCTCAAATCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: FSTVGNPATRSTEVLIAPCILRA*RCSNPP Trigger: TGGTGGATTTGAGCACCTTCAGGCTCTCAAAATACA...GGGAGCTATCAGTACCTCTGTGCTTCGGGTAGCAGGGTTTCCTACTGTGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| CDS-3UTR TCA 90 bp | CGTGGGTCAAATGCCATGACAAACTTCCTTTCACTATTGTGGCTGACAAAAGTGGCAGCCTCAGGAGGTTaGTGCAGGAAAAGAGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGSNAMTNFLSLLWLTKVAASGG*CRKRGS Trigger: GGAACCTCTTTTCCTGCATCAACCTCCTGAGGCTGC...CACTTTTGTCAGCCACAATAGTGAAAGGAAGTTTGTCATGGCATTTGACCCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | GTACATCAGGAGGGACTACCAGGCAGAACCCCAGAGTCCTCTCAAAATGACTCTGGAAAACAGCAGGAGTaGAAACGGCTCTTCATTATG | + |
|
Preference number: 4 (lower is better) Translates to: VHQEGLPGRTPESSQNDSGKQQE*KRLFIM Trigger: CATAATGAAGAGCCGTTTGCACTCCTGCTGTTTTCC...AGAGTCATTTTGAGAGGACTCTGGGGTTCTGCCTGGTAGTCCCTCCTGATGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | AGGCAGGCAGGTCTCTATGAGTTCAAGGTCAAGCTGGTCTACTTAGCAAGTTCTAGGCAGGCCCAACTCTaGACGCTTCTGTATTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RQAGLYEFKVKLVYLASSRQAQL*TLLYFE Trigger: CTCAAAATACAGAAGCGTGCAGAGTTGGGCCTGCCT...AGAACTTGCTAAGTAGACCAGCTTGACCTTGAACTCATAGAGACCTGCCTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR GCA 90 bp | TTCCAGGAGCTAAGAAAGCACTTTGAGAAAGACTGCCACCAAAGAGGAGACTCTGGGAGGCAGCACGCATaGTCTTTACAACCTGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: FQELRKHFEKDCHQRGDSGRQHA*SLQPGY Trigger: GTATCCAGGTTGTAAAGAGCATGCGTGCTGCCTCCC...AGAGTCTCCTCTTTGGTGGCAGTCTTTCTCAAAGTGCTTTCTTAGCTCCTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | TTTTCCACAGTAGGAAACCCTGCTACCCGAAGCACAGAGGTACTGATAGCTCCCCAGAATCTTAAGCAGTaGAATCATGTACTGGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSTVGNPATRSTEVLIAPQNLKQ*NHVLGE Trigger: CTCCCCCAGTACATGATTGCACTGCTTAAGATTCTG...GGGAGCTATCAGTACCTCTGTGCTTCGGGTAGCAGGGTTTCCTACTGTGGAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | TTCCAGGAGCTAAGAAAGCACTTTGAGAAAGACTGCCACCAAAGAGGAGACTCTCTTGGAGGTGGGAGCTaGAGCCAGCAGAATCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: FQELRKHFEKDCHQRGDSLGGGS*SQQNLK Trigger: CTTAAGATTCTGCTGGCTGCAGCTCCCACCTCCAAG...AGAGTCTCCTCTTTGGTGGCAGTCTTTCTCAAAGTGCTTTCTTAGCTCCTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | AAAGGAGACACCAGGATTTGGTTCTTCAGGAAAAGGCGTGAGATGAAGCTCAAGCTTGGAGGTGGGAGCTaGAGCCAGCAGAATCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: KGDTRIWFFRKRREMKLKLGGGS*SQQNLK Trigger: CTTAAGATTCTGCTGGCTGCAGCTCCCACCTCCAAG...CTTGAGCTTCATCTCACGCCTTTTCCTGAAGAACCAAATCCTGGTGTCTCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | TTCCAGGAGCTAAGAAAGCACTTTGAGAAAGACTGCCACCAAAGAGGAGACTCTGCAAATCCTGGATGGTaGAGCACGGGTAATCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FQELRKHFEKDCHQRGDSANPGW*STGNPA Trigger: TGCTGGATTACCCGTGCTGCACCATCCAGGATTTGC...AGAGTCTCCTCTTTGGTGGCAGTCTTTCTCAAAGTGCTTTCTTAGCTCCTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | TTCCAGGAGCTAAGAAAGCACTTTGAGAAAGACTGCCACCAAAGAGGAGACTCTCCCAGTCATCATTCATaGGGTGGCGCACTTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FQELRKHFEKDCHQRGDSPSHHS*GGALSG Trigger: ACCAGAAAGTGCGCCACCGCATGAATGATGACTGGG...AGAGTCTCCTCTTTGGTGGCAGTCTTTCTCAAAGTGCTTTCTTAGCTCCTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | AGGCAGGCAGGTCTCTATGAGTTCAAGGTCAAGCTGGTCTACTTAGCAAGTTCTAGCAATGGAGACAGCTaGTTTCCGAAGGGCACTACT | + |
|
Preference number: 4 (lower is better) Translates to: RQAGLYEFKVKLVYLASSSNGDS*FPKGTT Trigger: AGTAGTGCCCTTCGGAAACCAGCTGTCTCCATTGCT...AGAACTTGCTAAGTAGACCAGCTTGACCTTGAACTCATAGAGACCTGCCTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR CCA 90 bp | GACCTCAGTTTGATCCCTGGAATCCCTGTGGTGGAAGGAGAGGACCAACTCCTGATGCTCTTTACAACCTaGATACTGTCTTCAGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: DLSLIPGIPVVEGEDQLLMLFTT*ILSSAS Trigger: ACTAGCTGAAGACAGTATCCAGGTTGTAAAGAGCAT...CAGGAGTTGGTCCTCTCCTTCCACCACAGGGATTCCAGGGATCAAACTGAGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR CCA 90 bp | AGGCAGGCAGGTCTCTATGAGTTCAAGGTCAAGCTGGTCTACTTAGCAAGTTCTTTCCTCCTCTGTGGCTaGTTCCTCAGTCTTGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RQAGLYEFKVKLVYLASSFLLCG*FLSLEE Trigger: CTCTTCAAGACTGAGGAACCAGCCACAGAGGAGGAA...AGAACTTGCTAAGTAGACCAGCTTGACCTTGAACTCATAGAGACCTGCCTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR TCA 90 bp | ACTTCATCTGTTACGTACTTCACATTCTCTGCCATTTTCCACAGTAGGAAACCCCACTCAGCAGTACCCTaGGCTCAGTGCTGTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TSSVTYFTFSAIFHSRKPHSAVP*AQCCQQ Trigger: TTGCTGACAGCACTGAGCTCAGGGTACTGCTGAGTG...GGGTTTCCTACTGTGGAAAATGGCAGAGAATGTGAAGTACGTAACAGATGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | TTCCAGGAGCTAAGAAAGCACTTTGAGAAAGACTGCCACCAAAGAGGAGACTCTAGGCAGGCCCAACTCTaGACGCTTCTGTATTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FQELRKHFEKDCHQRGDSRQAQL*TLLYFE Trigger: CTCAAAATACAGAAGCGTGCAGAGTTGGGCCTGCCT...AGAGTCTCCTCTTTGGTGGCAGTCTTTCTCAAAGTGCTTTCTTAGCTCCTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | CGTGGGTCAAATGCCATGACAAACTTCCTTTCACTATTGTGGCTGACAAAAGTGGGGAGGCAGCACGCATaGTCTTTACAACCTGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: RGSNAMTNFLSLLWLTKVGRQHA*SLQPGY Trigger: GTATCCAGGTTGTAAAGAGCATGCGTGCTGCCTCCC...CACTTTTGTCAGCCACAATAGTGAAAGGAAGTTTGTCATGGCATTTGACCCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | AAAGGAGACACCAGGATTTGGTTCTTCAGGAAAAGGCGTGAGATGAAGCTCAAGATGTCCAGGCTGTCTTaGTTGGTGAGGAGTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KGDTRIWFFRKRREMKLKMSRLS*LVRSCL Trigger: AAGGCAACTCCTCACCAAGCAAGACAGCCTGGACAT...CTTGAGCTTCATCTCACGCCTTTTCCTGAAGAACCAAATCCTGGTGTCTCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | GAAAACAATTCAGGGGCAGGCAAGATGGCTCCGTGGGTTAAGGCACTTGCTGCCATGGAGATATACTTGTaGTGCTTTAGAGTCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: ENNSGAGKMAPWVKALAAMEIYL*CFRVFT Trigger: TGTGAAGACTCTAAAGCAGCACAAGTATATCTCCAT...GGCAGCAAGTGCCTTAACCCACGGAGCCATCTTGCCTGCCCCTGAATTGTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR GCA 90 bp | AGGCAGGCAGGTCTCTATGAGTTCAAGGTCAAGCTGGTCTACTTAGCAAGTTCTGTCTGTTCACGTCAATaGCTAGCTTCATGCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RQAGLYEFKVKLVYLASSVCSRQ*LASCSG Trigger: TCCAGAGCATGAAGCTAGGCATTGACGTGAACAGAC...AGAACTTGCTAAGTAGACCAGCTTGACCTTGAACTCATAGAGACCTGCCTGCCT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR GCA 90 bp | CGTGGGTCAAATGCCATGACAAACTTCCTTTCACTATTGTGGCTGACAAAAGTGCCCAGTCATCATTCATaGGGTGGCGCACTTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RGSNAMTNFLSLLWLTKVPSHHS*GGALSG Trigger: ACCAGAAAGTGCGCCACCGCATGAATGATGACTGGG...CACTTTTGTCAGCCACAATAGTGAAAGGAAGTTTGTCATGGCATTTGACCCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | AAAGGAGACACCAGGATTTGGTTCTTCAGGAAAAGGCGTGAGATGAAGCTCAAGTTGTCGATTTCCATGTaGAGTAGCTCCAGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KGDTRIWFFRKRREMKLKLSISM*SSSRKA Trigger: GGCCTTCCTGGAGCTACTCCACATGGAAATCGACAA...CTTGAGCTTCATCTCACGCCTTTTCCTGAAGAACCAAATCCTGGTGTCTCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | CGTGGGTCAAATGCCATGACAAACTTCCTTTCACTATTGTGGCTGACAAAAGTGTTCTTTATTGGAAAGTaGGGGGCCAGGCCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGSNAMTNFLSLLWLTKVFFIGK*GARPLQ Trigger: CTGCAGTGGCCTGGCCCCCCACTTTCCAATAAAGAA...CACTTTTGTCAGCCACAATAGTGAAAGGAAGTTTGTCATGGCATTTGACCCACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | TTTTCCACAGTAGGAAACCCTGCTACCCGAAGCACAGAGGTACTGATAGCTCCCTCAAGGGGATGCAGTTaGCAAACACTAAATGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FSTVGNPATRSTEVLIAPSRGCS*QTLNVV Trigger: CACAACATTTAGTGTTTGCCAACTGCATCCCCTTGA...GGGAGCTATCAGTACCTCTGTGCTTCGGGTAGCAGGGTTTCCTACTGTGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | TTTTCCACAGTAGGAAACCCTGCTACCCGAAGCACAGAGGTACTGATAGCTCCCACACCACTAACATCATaGTCCTGGAATGCTTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: FSTVGNPATRSTEVLIAPTPLTS*SWNASI Trigger: AATGGAAGCATTCCAGGACCATGATGTTAGTGGTGT...GGGAGCTATCAGTACCTCTGTGCTTCGGGTAGCAGGGTTTCCTACTGTGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046028.12 |
||
| CDS-3UTR GCA 90 bp | GACAGAGGAAGGAGGATCACTCCAAGTTCAAGGCCAGCCTGGCTGTACAGTAAGATGGAGATATACTTGTaGTGCTTTAGAGTCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: DRGRRITPSSRPAWLYSKMEIYL*CFRVFT Trigger: TGTGAAGACTCTAAAGCAGCACAAGTATATCTCCAT...CTTACTGTACAGCCAGGCTGGCCTTGAACTTGGAGTGATCCTCCTTCCTCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | AGGCAGGCAGGTCTCTATGAGTTCAAGGTCAAGCTGGTCTACTTAGCAAGTTCTCAGAATCTTAAGCAGTaGAATCATGTACTGGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RQAGLYEFKVKLVYLASSQNLKQ*NHVLGE Trigger: CTCCCCCAGTACATGATTGCACTGCTTAAGATTCTG...AGAACTTGCTAAGTAGACCAGCTTGACCTTGAACTCATAGAGACCTGCCTGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR GCA 90 bp | ACTTCATCTGTTACGTACTTCACATTCTCTGCCATTTTCCACAGTAGGAAACCCGCAAATCCTGGATGGTaGAGCACGGGTAATCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TSSVTYFTFSAIFHSRKPANPGW*STGNPA Trigger: TGCTGGATTACCCGTGCTGCACCATCCAGGATTTGC...GGGTTTCCTACTGTGGAAAATGGCAGAGAATGTGAAGTACGTAACAGATGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | CGTGGGTCAAATGCCATGACAAACTTCCTTTCACTATTGTGGCTGACAAAAGTGCAGTGCTGTCAGCAATaGAGACAGCTGGTTTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: RGSNAMTNFLSLLWLTKVQCCQQ*RQLVSE Trigger: TTCGGAAACCAGCTGTCTCCATTGCTGACAGCACTG...CACTTTTGTCAGCCACAATAGTGAAAGGAAGTTTGTCATGGCATTTGACCCACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | GTACATCAGGAGGGACTACCAGGCAGAACCCCAGAGTCCTCTCAAAATGACTCTGCTCTTCATTATGTGTaGAGAAACTCAGTTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VHQEGLPGRTPESSQNDSALHYV*RNSVQF Trigger: GAACTGAACTGAGTTTCTCCACACATAATGAAGAGC...AGAGTCATTTTGAGAGGACTCTGGGGTTCTGCCTGGTAGTCCCTCCTGATGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | TGTAAGTTGTCCTCTGACTTCTGCACCTGCGCTGTAGCATACAGGTGCCCAACAGCTCTTCATTATGTGTaGAGAAACTCAGTTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CKLSSDFCTCAVAYRCPTALHYV*RNSVQF Trigger: GAACTGAACTGAGTTTCTCCACACATAATGAAGAGC...TGTTGGGCACCTGTATGCTACAGCGCAGGTGCAGAAGTCAGAGGACAACTTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCCACAGTAGGAAACCCTGCTACCCGAAGCACAGAGGTACTGATAGCTCCCATGCTCTTTACAACCTaGATACTGTCTTCAGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: FSTVGNPATRSTEVLIAPMLFTT*ILSSAS Trigger: ACTAGCTGAAGACAGTATCCAGGTTGTAAAGAGCAT...GGGAGCTATCAGTACCTCTGTGCTTCGGGTAGCAGGGTTTCCTACTGTGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | AAAGGAGACACCAGGATTTGGTTCTTCAGGAAAAGGCGTGAGATGAAGCTCAAGTCACACTCTCATGGATaGGTCGAGGTAATCCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: KGDTRIWFFRKRREMKLKSHSHG*VEVIQP Trigger: TGGTTGGATTACCTCGACCCATCCATGAGAGTGTGA...CTTGAGCTTCATCTCACGCCTTTTCCTGAAGAACCAAATCCTGGTGTCTCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | AAAGGAGACACCAGGATTTGGTTCTTCAGGAAAAGGCGTGAGATGAAGCTCAAGTTCACTCGGTGTTTCTaGTACCACCTCTTCTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KGDTRIWFFRKRREMKLKFTRCF*YHLFSQ Trigger: TTGGGAGAAGAGGTGGTACCAGAAACACCGAGTGAA...CTTGAGCTTCATCTCACGCCTTTTCCTGAAGAACCAAATCCTGGTGTCTCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | AAAGGAGACACCAGGATTTGGTTCTTCAGGAAAAGGCGTGAGATGAAGCTCAAGCCTAGCTTCATGCTCTaGAGAACAGTTACAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: KGDTRIWFFRKRREMKLKPSFML*RTVTGI Trigger: GATGCCTGTAACTGTTCTCCAGAGCATGAAGCTAGG...CTTGAGCTTCATCTCACGCCTTTTCCTGAAGAACCAAATCCTGGTGTCTCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | ACTTCATCTGTTACGTACTTCACATTCTCTGCCATTTTCCACAGTAGGAAACCCCTGGCAAATCCTGGATaGTGCAGCACGGGTAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TSSVTYFTFSAIFHSRKPLANPG*CSTGNP Trigger: TGGATTACCCGTGCTGCACCATCCAGGATTTGCCAG...GGGTTTCCTACTGTGGAAAATGGCAGAGAATGTGAAGTACGTAACAGATGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | CGTGGGTCAAATGCCATGACAAACTTCCTTTCACTATTGTGGCTGACAAAAGTGTTGCTTTTTCTCCACTaGCGCCCAAGGTACTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RGSNAMTNFLSLLWLTKVLLFLH*RPRYLV Trigger: GACCAAGTACCTTGGGCGCCAGTGGAGAAAAAGCAA...CACTTTTGTCAGCCACAATAGTGAAAGGAAGTTTGTCATGGCATTTGACCCACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | TTTTCCACAGTAGGAAACCCTGCTACCCGAAGCACAGAGGTACTGATAGCTCCCGTATCTTTAGTAGCATaGTCCTGGAATGCTTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: FSTVGNPATRSTEVLIAPVSLVA*SWNASI Trigger: AATGGAAGCATTCCAGGACCATGCTACTAAAGATAC...GGGAGCTATCAGTACCTCTGTGCTTCGGGTAGCAGGGTTTCCTACTGTGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151738.4 |
||
| CDS-3UTR TCA 90 bp | TGGACCAGCTCTCTAGGAATAAAGTGTCCTTGTGCTATCATAAAAAGATTCATTCCAGCAGATGGGCTGTaGGAACACCTCTCTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WTSSLGIKCPCAIIKRFIPADGL*EHLSLQ Trigger: CTGGAGAGAGAGGTGTTCTCACAGCCCATCTGCTGG...AATGAATCTTTTTATGATAGCACAAGGACACTTTATTCCTAGAGAGCTGGTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | ACTTCATCTGTTACGTACTTCACATTCTCTGCCATTTTCCACAGTAGGAAACCCAGGCAGGCCCAACTCTaGACGCTTCTGTATTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TSSVTYFTFSAIFHSRKPRQAQL*TLLYFE Trigger: CTCAAAATACAGAAGCGTGCAGAGTTGGGCCTGCCT...GGGTTTCCTACTGTGGAAAATGGCAGAGAATGTGAAGTACGTAACAGATGAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | AAAGGAGACACCAGGATTTGGTTCTTCAGGAAAAGGCGTGAGATGAAGCTCAAGCAATGCCTAGCTTCATaGTCTGGAGAACAGTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: KGDTRIWFFRKRREMKLKQCLAS*SGEQLQ Trigger: CTGTAACTGTTCTCCAGAGCATGAAGCTAGGCATTG...CTTGAGCTTCATCTCACGCCTTTTCCTGAAGAACCAAATCCTGGTGTCTCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | CGTGGGTCAAATGCCATGACAAACTTCCTTTCACTATTGTGGCTGACAAAAGTGGTCTGTTCACGTCAATaGCTAGCTTCATGCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RGSNAMTNFLSLLWLTKVVCSRQ*LASCSG Trigger: TCCAGAGCATGAAGCTAGGCATTGACGTGAACAGAC...CACTTTTGTCAGCCACAATAGTGAAAGGAAGTTTGTCATGGCATTTGACCCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | CGTGGGTCAAATGCCATGACAAACTTCCTTTCACTATTGTGGCTGACAAAAGTGCAGGGTACATTCTTCTaGTTGGAAGTCCCATGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RGSNAMTNFLSLLWLTKVQGTFF*LEVPWS Trigger: AGACCATGGGACTTCCAAGCAGAAGAATGTACCCTG...CACTTTTGTCAGCCACAATAGTGAAAGGAAGTTTGTCATGGCATTTGACCCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | ACTTCATCTGTTACGTACTTCACATTCTCTGCCATTTTCCACAGTAGGAAACCCAGCAATGGAGACAGCTaGTTTCCGAAGGGCACTACT | + |
|
Preference number: 4 (lower is better) Translates to: TSSVTYFTFSAIFHSRKPSNGDS*FPKGTT Trigger: AGTAGTGCCCTTCGGAAACCAGCTGTCTCCATTGCT...GGGTTTCCTACTGTGGAAAATGGCAGAGAATGTGAAGTACGTAACAGATGAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | CGTGGGTCAAATGCCATGACAAACTTCCTTTCACTATTGTGGCTGACAAAAGTGGGCGCCCAAGGTACTTaGTCTGTATCTTTAGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGSNAMTNFLSLLWLTKVGAQGT*SVSLVA Trigger: AGCTACTAAAGATACAGACCAAGTACCTTGGGCGCC...CACTTTTGTCAGCCACAATAGTGAAAGGAAGTTTGTCATGGCATTTGACCCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046028.12 |
||
| CDS-3UTR CCA 90 bp | ACTTCATCTGTTACGTACTTCACATTCTCTGCCATTTTCCACAGTAGGAAACCCTTGCTTTTTCTCCACTaGCGCCCAAGGTACTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TSSVTYFTFSAIFHSRKPLLFLH*RPRYLV Trigger: GACCAAGTACCTTGGGCGCCAGTGGAGAAAAAGCAA...GGGTTTCCTACTGTGGAAAATGGCAGAGAATGTGAAGTACGTAACAGATGAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | CGTGGGTCAAATGCCATGACAAACTTCCTTTCACTATTGTGGCTGACAAAAGTGGTACATTCTTCTGCTTaGAAGTCCCATGGTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RGSNAMTNFLSLLWLTKVVHSSA*KSHGLA Trigger: TGCCAGACCATGGGACTTCCAAGCAGAAGAATGTAC...CACTTTTGTCAGCCACAATAGTGAAAGGAAGTTTGTCATGGCATTTGACCCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR TCA 90 bp | TGGACCAGCTCTCTAGGAATAAAGTGTCCTTGTGCTATCATAAAAAGATTCATTCACTCAGCAGTACCCTaGGCTCAGTGCTGTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: WTSSLGIKCPCAIIKRFIHSAVP*AQCCQQ Trigger: TTGCTGACAGCACTGAGCTCAGGGTACTGCTGAGTG...AATGAATCTTTTTATGATAGCACAAGGACACTTTATTCCTAGAGAGCTGGTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR TCA 90 bp | ACTTCATCTGTTACGTACTTCACATTCTCTGCCATTTTCCACAGTAGGAAACCCCACGCTTCTGTATTTTaGGAGCCTGAAGGTGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TSSVTYFTFSAIFHSRKPHASVF*EPEGAQ Trigger: TTGAGCACCTTCAGGCTCTCAAAATACAGAAGCGTG...GGGTTTCCTACTGTGGAAAATGGCAGAGAATGTGAAGTACGTAACAGATGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | CTGGTTAATCTGAAGCTATTCCTAACCACATATGCTATCTCTCAAACTGGGAGAATGTCCAGGCTGTCTTaGTTGGTGAGGAGTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LVNLKLFLTTYAISQTGRMSRLS*LVRSCL Trigger: AAGGCAACTCCTCACCAAGCAAGACAGCCTGGACAT...TCTCCCAGTTTGAGAGATAGCATATGTGGTTAGGAATAGCTTCAGATTAACCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | ACTTCATCTGTTACGTACTTCACATTCTCTGCCATTTTCCACAGTAGGAAACCCGTCTTCACACTCTCATaGATGGGTCGAGGTAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TSSVTYFTFSAIFHSRKPVFTLS*MGRGNP Trigger: TGGATTACCTCGACCCATCCATGAGAGTGTGAAGAC...GGGTTTCCTACTGTGGAAAATGGCAGAGAATGTGAAGTACGTAACAGATGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | CTGGTTAATCTGAAGCTATTCCTAACCACATATGCTATCTCTCAAACTGGGAGAGGAAGTCCCATGGTCTaGCATCGATGTCATTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LVNLKLFLTTYAISQTGRGSPMV*HRCHSH Trigger: ATGGGAATGACATCGATGCCAGACCATGGGACTTCC...TCTCCCAGTTTGAGAGATAGCATATGTGGTTAGGAATAGCTTCAGATTAACCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR TCA 90 bp | TTCCAGGAGCTAAGAAAGCACTTTGAGAAAGACTGCCACCAAAGAGGAGACTCTTTAGTGTCTTGCACTTaGGTCCTGAAATCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FQELRKHFEKDCHQRGDSLVSCT*VLKSSS Trigger: TGAAGAAGATTTCAGGACTCAAGTGCAAGACACTAA...AGAGTCTCCTCTTTGGTGGCAGTCTTTCTCAAAGTGCTTTCTTAGCTCCTGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR TCA 90 bp | CTGGTTAATCTGAAGCTATTCCTAACCACATATGCTATCTCTCAAACTGGGAGACACGCTTCTGTATTTTaGGAGCCTGAAGGTGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LVNLKLFLTTYAISQTGRHASVF*EPEGAQ Trigger: TTGAGCACCTTCAGGCTCTCAAAATACAGAAGCGTG...TCTCCCAGTTTGAGAGATAGCATATGTGGTTAGGAATAGCTTCAGATTAACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | AAAGGAGACACCAGGATTTGGTTCTTCAGGAAAAGGCGTGAGATGAAGCTCAAGGCTCTTCATTATGTGTaGAGAAACTCAGTTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KGDTRIWFFRKRREMKLKALHYV*RNSVQF Trigger: GAACTGAACTGAGTTTCTCCACACATAATGAAGAGC...CTTGAGCTTCATCTCACGCCTTTTCCTGAAGAACCAAATCCTGGTGTCTCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | CTGGTTAATCTGAAGCTATTCCTAACCACATATGCTATCTCTCAAACTGGGAGATCACACTCTCATGGATaGGTCGAGGTAATCCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: LVNLKLFLTTYAISQTGRSHSHG*VEVIQP Trigger: TGGTTGGATTACCTCGACCCATCCATGAGAGTGTGA...TCTCCCAGTTTGAGAGATAGCATATGTGGTTAGGAATAGCTTCAGATTAACCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | CTGGTTAATCTGAAGCTATTCCTAACCACATATGCTATCTCTCAAACTGGGAGAGTCTTCACACTCTCATaGATGGGTCGAGGTAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LVNLKLFLTTYAISQTGRVFTLS*MGRGNP Trigger: TGGATTACCTCGACCCATCCATGAGAGTGTGAAGAC...TCTCCCAGTTTGAGAGATAGCATATGTGGTTAGGAATAGCTTCAGATTAACCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | CGTGGGTCAAATGCCATGACAAACTTCCTTTCACTATTGTGGCTGACAAAAGTGTCAAGGGGATGCAGTTaGCAAACACTAAATGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RGSNAMTNFLSLLWLTKVSRGCS*QTLNVV Trigger: CACAACATTTAGTGTTTGCCAACTGCATCCCCTTGA...CACTTTTGTCAGCCACAATAGTGAAAGGAAGTTTGTCATGGCATTTGACCCACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | CTGGTTAATCTGAAGCTATTCCTAACCACATATGCTATCTCTCAAACTGGGAGAGTACATTCTTCTGCTTaGAAGTCCCATGGTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVNLKLFLTTYAISQTGRVHSSA*KSHGLA Trigger: TGCCAGACCATGGGACTTCCAAGCAGAAGAATGTAC...TCTCCCAGTTTGAGAGATAGCATATGTGGTTAGGAATAGCTTCAGATTAACCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| 3UTR CAA 72 bp | CCCTACACAGTATGCTGTTCTGGAACATGCAGTGTTTaGGAAACAGTCATCCTTTATAAAGATGCAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PYTVCCSGTCSV*ETVILYKDAVL Trigger: GAGCACTGCATCTTTATAAAGGATGACTGTTTCCAAAACACTGCATGTTCCAGAACAGCATACTGTGTAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR TCA 90 bp | CCACCAGATGCCACTATTGTTTCACTGAGAAGACTCAAATATTCAGTAGGTCTTCTGGTTCCTCAGTCTTaGAGAGATCCCTTTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: PPDATIVSLRRLKYSVGLLVPQS*RDPFHC Trigger: ACAATGAAAGGGATCTCTTCAAGACTGAGGAACCAG...AAGACCTACTGAATATTTGAGTCTTCTCAGTGAAACAATAGTGGCATCTGGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR TCA 90 bp | CTGGTTAATCTGAAGCTATTCCTAACCACATATGCTATCTCTCAAACTGGGAGACTGGTTCCTCAGTCTTaGAGAGATCCCTTTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVNLKLFLTTYAISQTGRLVPQS*RDPFHC Trigger: ACAATGAAAGGGATCTCTTCAAGACTGAGGAACCAG...TCTCCCAGTTTGAGAGATAGCATATGTGGTTAGGAATAGCTTCAGATTAACCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | CTGGTTAATCTGAAGCTATTCCTAACCACATATGCTATCTCTCAAACTGGGAGACAATGCCTAGCTTCATaGTCTGGAGAACAGTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: LVNLKLFLTTYAISQTGRQCLAS*SGEQLQ Trigger: CTGTAACTGTTCTCCAGAGCATGAAGCTAGGCATTG...TCTCCCAGTTTGAGAGATAGCATATGTGGTTAGGAATAGCTTCAGATTAACCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CCA 90 bp | CGTGGGTCAAATGCCATGACAAACTTCCTTTCACTATTGTGGCTGACAAAAGTGATGCTCTTTACAACCTaGATACTGTCTTCAGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RGSNAMTNFLSLLWLTKVMLFTT*ILSSAS Trigger: ACTAGCTGAAGACAGTATCCAGGTTGTAAAGAGCAT...CACTTTTGTCAGCCACAATAGTGAAAGGAAGTTTGTCATGGCATTTGACCCACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | TGGACCAGCTCTCTAGGAATAAAGTGTCCTTGTGCTATCATAAAAAGATTCATTAAGGTATCTGTGTCCTaGCCCAGAGTGAATCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: WTSSLGIKCPCAIIKRFIKVSVS*PRVNPM Trigger: CATTGGATTCACTCTGGGGCAGGACACAGATACCTT...AATGAATCTTTTTATGATAGCACAAGGACACTTTATTCCTAGAGAGCTGGTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | CTGGTTAATCTGAAGCTATTCCTAACCACATATGCTATCTCTCAAACTGGGAGAATCATGGTCCTGGAATaGTTCCATTTGGTCAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LVNLKLFLTTYAISQTGRIMVLE*FHLVSL Trigger: TAAGCTGACCAAATGGAAGCATTCCAGGACCATGAT...TCTCCCAGTTTGAGAGATAGCATATGTGGTTAGGAATAGCTTCAGATTAACCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046028.12 |
||
| CDS-3UTR GCA 90 bp | TGGACCAGCTCTCTAGGAATAAAGTGTCCTTGTGCTATCATAAAAAGATTCATTCAGGGTACATTCTTCTaGTTGGAAGTCCCATGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WTSSLGIKCPCAIIKRFIQGTFF*LEVPWS Trigger: AGACCATGGGACTTCCAAGCAGAAGAATGTACCCTG...AATGAATCTTTTTATGATAGCACAAGGACACTTTATTCCTAGAGAGCTGGTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR TCA 90 bp | TGGACCAGCTCTCTAGGAATAAAGTGTCCTTGTGCTATCATAAAAAGATTCATTCTGGTTCCTCAGTCTTaGAGAGATCCCTTTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: WTSSLGIKCPCAIIKRFILVPQS*RDPFHC Trigger: ACAATGAAAGGGATCTCTTCAAGACTGAGGAACCAG...AATGAATCTTTTTATGATAGCACAAGGACACTTTATTCCTAGAGAGCTGGTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | TGGACCAGCTCTCTAGGAATAAAGTGTCCTTGTGCTATCATAAAAAGATTCATTCAGAATCTTAAGCAGTaGAATCATGTACTGGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WTSSLGIKCPCAIIKRFIQNLKQ*NHVLGE Trigger: CTCCCCCAGTACATGATTGCACTGCTTAAGATTCTG...AATGAATCTTTTTATGATAGCACAAGGACACTTTATTCCTAGAGAGCTGGTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | TGGACCAGCTCTCTAGGAATAAAGTGTCCTTGTGCTATCATAAAAAGATTCATTAGCATGGTCCTGGAATaGTTCCATTTGGTCAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: WTSSLGIKCPCAIIKRFISMVLE*FHLVSL Trigger: TAAGCTGACCAAATGGAAGCATTCCAGGACCATGCT...AATGAATCTTTTTATGATAGCACAAGGACACTTTATTCCTAGAGAGCTGGTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151738.4 |
||
| CDS-3UTR GCA 90 bp | TGGACCAGCTCTCTAGGAATAAAGTGTCCTTGTGCTATCATAAAAAGATTCATTATGGAGATATACTTGTaGTGCTTTAGAGTCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: WTSSLGIKCPCAIIKRFIMEIYL*CFRVFT Trigger: TGTGAAGACTCTAAAGCAGCACAAGTATATCTCCAT...AATGAATCTTTTTATGATAGCACAAGGACACTTTATTCCTAGAGAGCTGGTCCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS GCA 90 bp | CCACAGAGCCCTCCGACTCCCGCCGCTGGTTGCGGAACGTTTCCCTaGCCTTGGGCACGGCCGGCTTCCCTTTGCCGCCGTTGCCGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PQSPPTPAAGCGTFP*PWARPASLCRRCRS Trigger: GGAACGGCAACGGCGGCAAAGGGAAGCCGGCCGTGCCCAAGGGCAGGGAAACGTTCCGCAACCAGCGGCGGGAGTCGGAGGGCTCTGTGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
||
| CDS CCA 90 bp | AGCCCTCCGACTCCCGCCGCTGGTTGCGGAACGTTTCCCTGCCCTTaGGCACGGCCGGCTTCCCTTTGCCGCCGTTGCCGTTCCCGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SPPTPAAGCGTFPCP*ARPASLCRRCRSRS Trigger: GGAACGGGAACGGCAACGGCGGCAAAGGGAAGCCGGCCGTGCCCAAGGGCAGGGAAACGTTCCGCAACCAGCGGCGGGAGTCGGAGGGCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
||
| CDS CCA 90 bp | GAGGAGTTGCCTTCGAGAACCACGGCGTCCCCGCAGCTTGGAGGGTaGAGGAGCCAGCTGAGACTCCCCCAGATCAAGAGTGTAAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: EELPSRTTASPQLGG*RSQLRLPQIKSVRR Trigger: CCTTCTTACACTCTTGATCTGGGGGAGTCTCAGCTGGCTCCTCCACCCTCCAAGCTGCGGGGACGCCGTGGTTCTCGAAGGCAACTCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | TTTTCCACAGTAGGAAACCCTGCTACCCGAAGCACAGAGGTACTGATAGCTCCCCGGCGTCCCCGCAGCTaGGAGGGTGGAGGAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FSTVGNPATRSTEVLIAPRRPRS*EGGGAS Trigger: GCTGGCTCCTCCACCCTCCAAGCTGCGGGGACGCCG...GGGAGCTATCAGTACCTCTGTGCTTCGGGTAGCAGGGTTTCCTACTGTGGAAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | GGCAAGATGGCTCCGTGGGTTAAGGCACTTGCTGCCAAGCCCGAGGACCTCAGTCTCGAGGCCTGGCTGTaGTCGATTTCCATGTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GKMAPWVKALAAKPEDLSLEAWL*SISMWS Trigger: ACTCCACATGGAAATCGACAACAGCCAGGCCTCGAG...ACTGAGGTCCTCGGGCTTGGCAGCAAGTGCCTTAACCCACGGAGCCATCTTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR CAA 90 bp | AGGCAGGCAGGTCTCTATGAGTTCAAGGTCAAGCTGGTCTACTTAGCAAGTTCTCGGCGTCCCCGCAGCTaGGAGGGTGGAGGAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RQAGLYEFKVKLVYLASSRRPRS*EGGGAS Trigger: GCTGGCTCCTCCACCCTCCAAGCTGCGGGGACGCCG...AGAACTTGCTAAGTAGACCAGCTTGACCTTGAACTCATAGAGACCTGCCTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR CAA 90 bp | ATCCTAGCACTAGGAAGACAGAGGCAGGCAGGTCTCTATGAGTTCAAGGTCAAGGACTCCCGCCGCTGGTaGCGGAACGTTTCCCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ILALGRQRQAGLYEFKVKDSRRW*RNVSLP Trigger: GGGCAGGGAAACGTTCCGCAACCAGCGGCGGGAGTC...CTTGACCTTGAACTCATAGAGACCTGCCTGCCTCTGTCTTCCTAGTGCTAGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR CAA 90 bp | AAAGGAGACACCAGGATTTGGTTCTTCAGGAAAAGGCGTGAGATGAAGCTCAAGCGGCGTCCCCGCAGCTaGGAGGGTGGAGGAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KGDTRIWFFRKRREMKLKRRPRS*EGGGAS Trigger: GCTGGCTCCTCCACCCTCCAAGCTGCGGGGACGCCG...CTTGAGCTTCATCTCACGCCTTTTCCTGAAGAACCAAATCCTGGTGTCTCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS GCA 90 bp | ACTCCCCCAGATCAAGAGTGTAAGAAGGCGGGGAGGCAGCACGCATaGTCTTTACAACCTGGATACTGTCTTCAGCTAGTGGAGGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TPPDQECKKAGRQHA*SLQPGYCLQLVEAG Trigger: GCCTGCCTCCACTAGCTGAAGACAGTATCCAGGTTGTAAAGAGCATGCGTGCTGCCTCCCCGCCTTCTTACACTCTTGATCTGGGGGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
||
| CDS CCA 90 bp | ACTCAGCAGTACCCTGAGCTCAGTGCTGTCAGCAATGGAGACAGCTaGTTTCCGAAGGGCACTACTCGAGGCCTGGCTGTTGTCGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: TQQYPELSAVSNGDS*FPKGTTRGLAVVDF Trigger: GAAATCGACAACAGCCAGGCCTCGAGTAGTGCCCTTCGGAAACCAGCTGTCTCCATTGCTGACAGCACTGAGCTCAGGGTACTGCTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | TTCCAGGAGCTAAGAAAGCACTTTGAGAAAGACTGCCACCAAAGAGGAGACTCTGACTCCCGCCGCTGGTaGCGGAACGTTTCCCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: FQELRKHFEKDCHQRGDSDSRRW*RNVSLP Trigger: GGGCAGGGAAACGTTCCGCAACCAGCGGCGGGAGTC...AGAGTCTCCTCTTTGGTGGCAGTCTTTCTCAAAGTGCTTTCTTAGCTCCTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | GGCAAGATGGCTCCGTGGGTTAAGGCACTTGCTGCCAAGCCCGAGGACCTCAGTAGGCCACTGCAGAATTaGGTAACCATGGAAAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: GKMAPWVKALAAKPEDLSRPLQN*VTMENS Trigger: GCTGTTTTCCATGGTTACCAAATTCTGCAGTGGCCT...ACTGAGGTCCTCGGGCTTGGCAGCAAGTGCCTTAACCCACGGAGCCATCTTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS CCA 90 bp | AGGCCGAGAAGGTCCCCATCTGGTAGAGCAGGAAGCAATTGTATCTaGACCAGTGTAGCACATCGACCTCGGAATCACATTCCCCGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RPRRSPSGRAGSNCI*TSVAHRPRNHIPRK Trigger: CTTTCGGGGAATGTGATTCCGAGGTCGATGTGCTACACTGGTCCAGATACAATTGCTTCCTGCTCTACCAGATGGGGACCTTCTCGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | ACTTCATCTGTTACGTACTTCACATTCTCTGCCATTTTCCACAGTAGGAAACCCGACTCCCGCCGCTGGTaGCGGAACGTTTCCCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TSSVTYFTFSAIFHSRKPDSRRW*RNVSLP Trigger: GGGCAGGGAAACGTTCCGCAACCAGCGGCGGGAGTC...GGGTTTCCTACTGTGGAAAATGGCAGAGAATGTGAAGTACGTAACAGATGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | AACTCCTGTAAGTTGTCCTCTGACTTCTGCACCTGCGCTGTAGCATACAGGTGCTCCAGGCTGTCTTGCTaGGTGAGGAGTTGCCTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: NSCKLSSDFCTCAVAYRCSRLSC*VRSCLR Trigger: TCGAAGGCAACTCCTCACCAAGCAAGACAGCCTGGA...GCACCTGTATGCTACAGCGCAGGTGCAGAAGTCAGAGGACAACTTACAGGAGTT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR CAA 90 bp | ATTCAGGGGCAGGCAAGATGGCTCCGTGGGTTAAGGCACTTGCTGCCAAGCCCGGCAATGGAGATATACTaGTGCTGCTTTAGAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IQGQARWLRGLRHLLPSPAMEIY*CCFRVF Trigger: GAAGACTCTAAAGCAGCACAAGTATATCTCCATTGC...CGGGCTTGGCAGCAAGTGCCTTAACCCACGGAGCCATCTTGCCTGCCCCTGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR CAA 90 bp | GGCAAGATGGCTCCGTGGGTTAAGGCACTTGCTGCCAAGCCCGAGGACCTCAGTATCAAGGGGATGCAGTaGGCAAACACTAAATGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GKMAPWVKALAAKPEDLSIKGMQ*ANTKCC Trigger: ACAACATTTAGTGTTTGCCAACTGCATCCCCTTGAT...ACTGAGGTCCTCGGGCTTGGCAGCAAGTGCCTTAACCCACGGAGCCATCTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR CAA 90 bp | GAAAACAATTCAGGGGCAGGCAAGATGGCTCCGTGGGTTAAGGCACTTGCTGCCGCTGGTTCCTCAGTCTaGAAGAGATCCCTTTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: ENNSGAGKMAPWVKALAAAGSSV*KRSLSL Trigger: CAATGAAAGGGATCTCTTCAAGACTGAGGAACCAGC...GGCAGCAAGTGCCTTAACCCACGGAGCCATCTTGCCTGCCCCTGAATTGTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCCACAGTAGGAAACCCTGCTACCCGAAGCACAGAGGTACTGATAGCTCCCAGCAGCCTCAGGAGGTaGATGCAGGAAAAGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FSTVGNPATRSTEVLIAPSSLRR*MQEKRF Trigger: GAACCTCTTTTCCTGCATCAACCTCCTGAGGCTGCT...GGGAGCTATCAGTACCTCTGTGCTTCGGGTAGCAGGGTTTCCTACTGTGGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS GCA 90 bp | TGCCAGGATATTGATAGAGTCTGTCTTAGCCTTGGAGGTGGGAGCTaGAGCCAGCAGAATCTTAAGCAGTGCAATCATGTACTGGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CQDIDRVCLSLGGGS*SQQNLKQCNHVLGE Trigger: CTCCCCCAGTACATGATTGCACTGCTTAAGATTCTGCTGGCTGCAGCTCCCACCTCCAAGGCTAAGACAGACTCTATCAATATCCTGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
||
| CDS GCA 90 bp | CATGCTCTGGAGAACAGTTACAGGCATCTCTTCAGGCAGGACATCTaGCAGGATATTGATAGAGTCTGTCTTAGCCTTGGAGGTGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: HALENSYRHLFRQDI*QDIDRVCLSLGGGS Trigger: GCTCCCACCTCCAAGGCTAAGACAGACTCTATCAATATCCTGGCAGATGTCCTGCCTGAAGAGATGCCTGTAACTGTTCTCCAGAGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | GACAGAGGAAGGAGGATCACTCCAAGTTCAAGGCCAGCCTGGCTGTACAGTAAGAGGCCACTGCAGAATTaGGTAACCATGGAAAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: DRGRRITPSSRPAWLYSKRPLQN*VTMENS Trigger: GCTGTTTTCCATGGTTACCAAATTCTGCAGTGGCCT...CTTACTGTACAGCCAGGCTGGCCTTGAACTTGGAGTGATCCTCCTTCCTCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | GTACATCAGGAGGGACTACCAGGCAGAACCCCAGAGTCCTCTCAAAATGACTCTGACATGGTCTTCATGTaGCTTTTTCTCCACTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: VHQEGLPGRTPESSQNDSDMVFM*LFLHWR Trigger: GCGCCAGTGGAGAAAAAGCAACATGAAGACCATGTC...AGAGTCATTTTGAGAGGACTCTGGGGTTCTGCCTGGTAGTCCCTCCTGATGTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS TCA 90 bp | AGCACGCTCTGCAAGCAGTTATCCACAGGTGAGAATTCTGAGTCCTaGGGCTTATCATATCGGCGGCTGTTAAAAGCCTCAATGTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: STLCKQLSTGENSES*GLSYRRLLKASMLA Trigger: GGCCAACATTGAGGCTTTTAACAGCCGCCGATATGATAAGCCTCAGGACTCAGAATTCTCACCTGTGGATAACTGCTTGCAGAGCGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | GTACATCAGGAGGGACTACCAGGCAGAACCCCAGAGTCCTCTCAAAATGACTCTAGGCCACTGCAGAATTaGGTAACCATGGAAAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: VHQEGLPGRTPESSQNDSRPLQN*VTMENS Trigger: GCTGTTTTCCATGGTTACCAAATTCTGCAGTGGCCT...AGAGTCATTTTGAGAGGACTCTGGGGTTCTGCCTGGTAGTCCCTCCTGATGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS GCA 90 bp | GGCCAGGCCACTGCAGAATTTGGTAACCATGGAAAACAGCAGGAGTaGAAACGGCTCTTCATTATGTGTGGAGAAACTCAGTTCAGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: GQATAEFGNHGKQQE*KRLFIMCGETQFSS Trigger: CGAACTGAACTGAGTTTCTCCACACATAATGAAGAGCCGTTTGCACTCCTGCTGTTTTCCATGGTTACCAAATTCTGCAGTGGCCTGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
||
| CDS CCA 90 bp | TGGAGATATACTTGTGCTGCTTTAGAGTCTTCACACTCTCATGGATaGGTCGAGGTAATCCAACCAAGGTATCTGTGTCCTGCCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: WRYTCAALESSHSHG*VEVIQPRYLCPAPE Trigger: CTCTGGGGCAGGACACAGATACCTTGGTTGGATTACCTCGACCCATCCATGAGAGTGTGAAGACTCTAAAGCAGCACAAGTATATCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
||
| CDS CCA 90 bp | GCAATGGAGATATACTTGTGCTGCTTTAGAGTCTTCACACTCTCATaGATGGGTCGAGGTAATCCAACCAAGGTATCTGTGTCCTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: AMEIYLCCFRVFTLS*MGRGNPTKVSVSCP Trigger: GGGGCAGGACACAGATACCTTGGTTGGATTACCTCGACCCATCCATGAGAGTGTGAAGACTCTAAAGCAGCACAAGTATATCTCCATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | CGTGGGTCAAATGCCATGACAAACTTCCTTTCACTATTGTGGCTGACAAAAGTGCTCGAGGCCTGGCTGTaGTCGATTTCCATGTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RGSNAMTNFLSLLWLTKVLEAWL*SISMWS Trigger: ACTCCACATGGAAATCGACAACAGCCAGGCCTCGAG...CACTTTTGTCAGCCACAATAGTGAAAGGAAGTTTGTCATGGCATTTGACCCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | GACAGAGGAAGGAGGATCACTCCAAGTTCAAGGCCAGCCTGGCTGTACAGTAAGTTGAGTTTGAAGTGTTaGAGAAGTAGAAGGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DRGRRITPSSRPAWLYSKLSLKC*RSRRSR Trigger: CCTGCTCCTTCTACTTCTCAAACACTTCAAACTCAA...CTTACTGTACAGCCAGGCTGGCCTTGAACTTGGAGTGATCCTCCTTCCTCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | GACAGAGGAAGGAGGATCACTCCAAGTTCAAGGCCAGCCTGGCTGTACAGTAAGATCAAGGGGATGCAGTaGGCAAACACTAAATGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: DRGRRITPSSRPAWLYSKIKGMQ*ANTKCC Trigger: ACAACATTTAGTGTTTGCCAACTGCATCCCCTTGAT...CTTACTGTACAGCCAGGCTGGCCTTGAACTTGGAGTGATCCTCCTTCCTCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | AAAGGAGACACCAGGATTTGGTTCTTCAGGAAAAGGCGTGAGATGAAGCTCAAGGGTACATTCTTCTGCTaGGAAGTCCCATGGTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: KGDTRIWFFRKRREMKLKGTFFC*EVPWSG Trigger: GCCAGACCATGGGACTTCCAAGCAGAAGAATGTACC...CTTGAGCTTCATCTCACGCCTTTTCCTGAAGAACCAAATCCTGGTGTCTCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | GTACATCAGGAGGGACTACCAGGCAGAACCCCAGAGTCCTCTCAAAATGACTCTTTAAAAGCCTCAATGTaGGCCCTCAGGGTACATTCT | + |
|
Preference number: 5 (lower is better) Translates to: VHQEGLPGRTPESSQNDSLKASM*ALRVHS Trigger: AGAATGTACCCTGAGGGCCAACATTGAGGCTTTTAA...AGAGTCATTTTGAGAGGACTCTGGGGTTCTGCCTGGTAGTCCCTCCTGATGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | GTACATCAGGAGGGACTACCAGGCAGAACCCCAGAGTCCTCTCAAAATGACTCTGCAATGGAGATATACTaGTGCTGCTTTAGAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VHQEGLPGRTPESSQNDSAMEIY*CCFRVF Trigger: GAAGACTCTAAAGCAGCACAAGTATATCTCCATTGC...AGAGTCATTTTGAGAGGACTCTGGGGTTCTGCCTGGTAGTCCCTCCTGATGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | ATCCTAGCACTAGGAAGACAGAGGCAGGCAGGTCTCTATGAGTTCAAGGTCAAGACATCTGCCAGGATATaGATAGAGTCTGTCTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ILALGRQRQAGLYEFKVKTSARI*IESVLA Trigger: GGCTAAGACAGACTCTATCAATATCCTGGCAGATGT...CTTGACCTTGAACTCATAGAGACCTGCCTGCCTCTGTCTTCCTAGTGCTAGGAT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR CAA 90 bp | AACTCCTGTAAGTTGTCCTCTGACTTCTGCACCTGCGCTGTAGCATACAGGTGCTTGAGTTTGAAGTGTTaGAGAAGTAGAAGGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NSCKLSSDFCTCAVAYRCLSLKC*RSRRSR Trigger: CCTGCTCCTTCTACTTCTCAAACACTTCAAACTCAA...GCACCTGTATGCTACAGCGCAGGTGCAGAAGTCAGAGGACAACTTACAGGAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
||
| CDS-3UTR CAA 90 bp | ACTTCATCTGTTACGTACTTCACATTCTCTGCCATTTTCCACAGTAGGAAACCCCAGCAGAACTGGCTATaGTCTCCGGCTTCCAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: TSSVTYFTFSAIFHSRKPQQNWL*SPASRL Trigger: GAGTCTGGAAGCCGGAGACAATAGCCAGTTCTGCTG...GGGTTTCCTACTGTGGAAAATGGCAGAGAATGTGAAGTACGTAACAGATGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | TTTTCCACAGTAGGAAACCCTGCTACCCGAAGCACAGAGGTACTGATAGCTCCCATGGCCTGTTTGACTTaGAGAGCTCGCTTTAAGATT | + |
|
Preference number: 5 (lower is better) Translates to: FSTVGNPATRSTEVLIAPMACLT*RARFKI Trigger: AATCTTAAAGCGAGCTCTCAAAGTCAAACAGGCCAT...GGGAGCTATCAGTACCTCTGTGCTTCGGGTAGCAGGGTTTCCTACTGTGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046028.12 |
||
| CDS-3UTR CAA 90 bp | CTGGTTAATCTGAAGCTATTCCTAACCACATATGCTATCTCTCAAACTGGGAGATCCAGGCTGTCTTGCTaGGTGAGGAGTTGCCTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: LVNLKLFLTTYAISQTGRSRLSC*VRSCLR Trigger: TCGAAGGCAACTCCTCACCAAGCAAGACAGCCTGGA...TCTCCCAGTTTGAGAGATAGCATATGTGGTTAGGAATAGCTTCAGATTAACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | AAAGGAGACACCAGGATTTGGTTCTTCAGGAAAAGGCGTGAGATGAAGCTCAAGGCTGGTTCCTCAGTCTaGAAGAGATCCCTTTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: KGDTRIWFFRKRREMKLKAGSSV*KRSLSL Trigger: CAATGAAAGGGATCTCTTCAAGACTGAGGAACCAGC...CTTGAGCTTCATCTCACGCCTTTTCCTGAAGAACCAAATCCTGGTGTCTCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | AAAGGAGACACCAGGATTTGGTTCTTCAGGAAAAGGCGTGAGATGAAGCTCAAGCTGGAATGCTTCCATTaGGTCAGCTTATTGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KGDTRIWFFRKRREMKLKLECFH*VSLLSS Trigger: GCTGCTCAATAAGCTGACCAAATGGAAGCATTCCAG...CTTGAGCTTCATCTCACGCCTTTTCCTGAAGAACCAAATCCTGGTGTCTCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | TTCCAGGAGCTAAGAAAGCACTTTGAGAAAGACTGCCACCAAAGAGGAGACTCTCTGGAATGCTTCCATTaGGTCAGCTTATTGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FQELRKHFEKDCHQRGDSLECFH*VSLLSS Trigger: GCTGCTCAATAAGCTGACCAAATGGAAGCATTCCAG...AGAGTCTCCTCTTTGGTGGCAGTCTTTCTCAAAGTGCTTTCTTAGCTCCTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS GCA 90 bp | AAGATTGGAGCTGACTTAAACACCACTAACATCATGGTCCTGGAATaGTTCCATTTGGTCAGCTTATTGAGCAGCCTCAGGAGGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: KIGADLNTTNIMVLE*FHLVSLLSSLRRLM Trigger: CATCAACCTCCTGAGGCTGCTCAATAAGCTGACCAAATGGAAGCATTCCAGGACCATGATGTTAGTGGTGTTTAAGTCAGCTCCAATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046028.12 |
||
| CDS-3UTR CAA 90 bp | AAAGGAGACACCAGGATTTGGTTCTTCAGGAAAAGGCGTGAGATGAAGCTCAAGACATCTGCCAGGATATaGATAGAGTCTGTCTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KGDTRIWFFRKRREMKLKTSARI*IESVLA Trigger: GGCTAAGACAGACTCTATCAATATCCTGGCAGATGT...CTTGAGCTTCATCTCACGCCTTTTCCTGAAGAACCAAATCCTGGTGTCTCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | GTACATCAGGAGGGACTACCAGGCAGAACCCCAGAGTCCTCTCAAAATGACTCTTTTACAATGATTTCCTaGTGTCTGTTCACGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: VHQEGLPGRTPESSQNDSFTMIS*CLFTSM Trigger: CATTGACGTGAACAGACACAAGGAAATCATTGTAAA...AGAGTCATTTTGAGAGGACTCTGGGGTTCTGCCTGGTAGTCCCTCCTGATGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | CTGGTTAATCTGAAGCTATTCCTAACCACATATGCTATCTCTCAAACTGGGAGAAGCAGCCTCAGGAGGTaGATGCAGGAAAAGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LVNLKLFLTTYAISQTGRSSLRR*MQEKRF Trigger: GAACCTCTTTTCCTGCATCAACCTCCTGAGGCTGCT...TCTCCCAGTTTGAGAGATAGCATATGTGGTTAGGAATAGCTTCAGATTAACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | CGTGGGTCAAATGCCATGACAAACTTCCTTTCACTATTGTGGCTGACAAAAGTGTGTAGCATGGCCTGTTaGACTTTGAGAGCTCGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RGSNAMTNFLSLLWLTKVCSMAC*TLRARF Trigger: AAAGCGAGCTCTCAAAGTCAAACAGGCCATGCTACA...CACTTTTGTCAGCCACAATAGTGAAAGGAAGTTTGTCATGGCATTTGACCCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046028.12 |
||
| CDS-3UTR CAA 90 bp | TGGACCAGCTCTCTAGGAATAAAGTGTCCTTGTGCTATCATAAAAAGATTCATTTCCAGGCTGTCTTGCTaGGTGAGGAGTTGCCTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: WTSSLGIKCPCAIIKRFISRLSC*VRSCLR Trigger: TCGAAGGCAACTCCTCACCAAGCAAGACAGCCTGGA...AATGAATCTTTTTATGATAGCACAAGGACACTTTATTCCTAGAGAGCTGGTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | ACTTCATCTGTTACGTACTTCACATTCTCTGCCATTTTCCACAGTAGGAAACCCGCTGGTTCCTCAGTCTaGAAGAGATCCCTTTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: TSSVTYFTFSAIFHSRKPAGSSV*KRSLSL Trigger: CAATGAAAGGGATCTCTTCAAGACTGAGGAACCAGC...GGGTTTCCTACTGTGGAAAATGGCAGAGAATGTGAAGTACGTAACAGATGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | TTCCAGGAGCTAAGAAAGCACTTTGAGAAAGACTGCCACCAAAGAGGAGACTCTTTGAGTTTGAAGTGTTaGAGAAGTAGAAGGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FQELRKHFEKDCHQRGDSLSLKC*RSRRSR Trigger: CCTGCTCCTTCTACTTCTCAAACACTTCAAACTCAA...AGAGTCTCCTCTTTGGTGGCAGTCTTTCTCAAAGTGCTTTCTTAGCTCCTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | TGGACCAGCTCTCTAGGAATAAAGTGTCCTTGTGCTATCATAAAAAGATTCATTCAGCAGAACTGGCTATaGTCTCCGGCTTCCAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: WTSSLGIKCPCAIIKRFIQQNWL*SPASRL Trigger: GAGTCTGGAAGCCGGAGACAATAGCCAGTTCTGCTG...AATGAATCTTTTTATGATAGCACAAGGACACTTTATTCCTAGAGAGCTGGTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | CTGGTTAATCTGAAGCTATTCCTAACCACATATGCTATCTCTCAAACTGGGAGAGACATGGTCTTCATGTaGCTTTTTCTCCACTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LVNLKLFLTTYAISQTGRDMVFM*LFLHWR Trigger: GCGCCAGTGGAGAAAAAGCAACATGAAGACCATGTC...TCTCCCAGTTTGAGAGATAGCATATGTGGTTAGGAATAGCTTCAGATTAACCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | CGTGGGTCAAATGCCATGACAAACTTCCTTTCACTATTGTGGCTGACAAAAGTGTTAAAAGCCTCAATGTaGGCCCTCAGGGTACATTCT | + |
|
Preference number: 5 (lower is better) Translates to: RGSNAMTNFLSLLWLTKVLKASM*ALRVHS Trigger: AGAATGTACCCTGAGGGCCAACATTGAGGCTTTTAA...CACTTTTGTCAGCCACAATAGTGAAAGGAAGTTTGTCATGGCATTTGACCCACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | CGTGGGTCAAATGCCATGACAAACTTCCTTTCACTATTGTGGCTGACAAAAGTGGCAATGGAGATATACTaGTGCTGCTTTAGAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RGSNAMTNFLSLLWLTKVAMEIY*CCFRVF Trigger: GAAGACTCTAAAGCAGCACAAGTATATCTCCATTGC...CACTTTTGTCAGCCACAATAGTGAAAGGAAGTTTGTCATGGCATTTGACCCACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | ACTTCATCTGTTACGTACTTCACATTCTCTGCCATTTTCCACAGTAGGAAACCCACATCTGCCAGGATATaGATAGAGTCTGTCTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TSSVTYFTFSAIFHSRKPTSARI*IESVLA Trigger: GGCTAAGACAGACTCTATCAATATCCTGGCAGATGT...GGGTTTCCTACTGTGGAAAATGGCAGAGAATGTGAAGTACGTAACAGATGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| CDS-3UTR CAA 90 bp | TGGACCAGCTCTCTAGGAATAAAGTGTCCTTGTGCTATCATAAAAAGATTCATTGGTACATTCTTCTGCTaGGAAGTCCCATGGTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: WTSSLGIKCPCAIIKRFIGTFFC*EVPWSG Trigger: GCCAGACCATGGGACTTCCAAGCAGAAGAATGTACC...AATGAATCTTTTTATGATAGCACAAGGACACTTTATTCCTAGAGAGCTGGTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS-3UTR CAA 90 bp | CCACCAGATGCCACTATTGTTTCACTGAGAAGACTCAAATATTCAGTAGGTCTTTTTACAATGATTTCCTaGTGTCTGTTCACGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: PPDATIVSLRRLKYSVGLFTMIS*CLFTSM Trigger: CATTGACGTGAACAGACACAAGGAAATCATTGTAAA...AAGACCTACTGAATATTTGAGTCTTCTCAGTGAAACAATAGTGGCATCTGGTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115224.8 |
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| CDS-3UTR CAA 90 bp | TGGACCAGCTCTCTAGGAATAAAGTGTCCTTGTGCTATCATAAAAAGATTCATTATCAAGGGGATGCAGTaGGCAAACACTAAATGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: WTSSLGIKCPCAIIKRFIIKGMQ*ANTKCC Trigger: ACAACATTTAGTGTTTGCCAACTGCATCCCCTTGAT...AATGAATCTTTTTATGATAGCACAAGGACACTTTATTCCTAGAGAGCTGGTCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| CDS CAA 72 bp | GGGCAGTCCACAGAGCCCTCCGACTCCCGCCGCTGGTaGCGGAACGTTTCCCTGCCCTTGGGCACGGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: GQSTEPSDSRRW*RNVSLPLGTAG Trigger: GCCGGCCGTGCCCAAGGGCAGGGAAACGTTCCGCAACCAGCGGCGGGAGTCGGAGGGCTCTGTGGACTGCCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
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| CDS GCA 72 bp | CCTCCGACTCCCGCCGCTGGTTGCGGAACGTTTCCCTaGCCTTGGGCACGGCCGGCTTCCCTTTGCCGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: PPTPAAGCGTFP*PWARPASLCRR Trigger: ACGGCGGCAAAGGGAAGCCGGCCGTGCCCAAGGGCAGGGAAACGTTCCGCAACCAGCGGCGGGAGTCGGAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
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| CDS GCA 72 bp | GGCAGTCCACAGAGCCCTCCGACTCCCGCCGCTGGTTaGGGAACGTTTCCCTGCCCTTGGGCACGGCCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GSPQSPPTPAAG*GTFPCPWARPA Trigger: AGCCGGCCGTGCCCAAGGGCAGGGAAACGTTCCGCAACCAGCGGCGGGAGTCGGAGGGCTCTGTGGACTGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
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| CDS CAA 72 bp | GACTCCCGCCGCTGGTTGCGGAACGTTTCCCTGCCCTaGGGCACGGCCGGCTTCCCTTTGCCGCCGTTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: DSRRWLRNVSLP*GTAGFPLPPLP Trigger: CGGCAACGGCGGCAAAGGGAAGCCGGCCGTGCCCAAGGGCAGGGAAACGTTCCGCAACCAGCGGCGGGAGTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
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| CDS CAA 90 bp | GAGCCCTCCGACTCCCGCCGCTGGTTGCGGAACGTTTCCCTGCCCTaGGGCACGGCCGGCTTCCCTTTGCCGCCGTTGCCGTTCCCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: EPSDSRRWLRNVSLP*GTAGFPLPPLPFPF Trigger: GAACGGGAACGGCAACGGCGGCAAAGGGAAGCCGGCCGTGCCCAAGGGCAGGGAAACGTTCCGCAACCAGCGGCGGGAGTCGGAGGGCTC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
||
| CDS CCA 72 bp | ACTCCCGCCGCTGGTTGCGGAACGTTTCCCTGCCCTTaGGCACGGCCGGCTTCCCTTTGCCGCCGTTGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: TPAAGCGTFPCP*ARPASLCRRCR Trigger: ACGGCAACGGCGGCAAAGGGAAGCCGGCCGTGCCCAAGGGCAGGGAAACGTTCCGCAACCAGCGGCGGGAGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
||
| CDS CCA 72 bp | GTAGGGCAGTCCACAGAGCCCTCCGACTCCCGCCGCTaGTTGCGGAACGTTTCCCTGCCCTTGGGCACGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VGQSTEPSDSRR*LRNVSLPLGTA Trigger: GGCCGTGCCCAAGGGCAGGGAAACGTTCCGCAACCAGCGGCGGGAGTCGGAGGGCTCTGTGGACTGCCCTAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
||
| CDS CAA 90 bp | TCCAGAGTAGGGCAGTCCACAGAGCCCTCCGACTCCCGCCGCTGGTaGCGGAACGTTTCCCTGCCCTTGGGCACGGCCGGCTTCCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SRVGQSTEPSDSRRW*RNVSLPLGTAGFPL Trigger: CAAAGGGAAGCCGGCCGTGCCCAAGGGCAGGGAAACGTTCCGCAACCAGCGGCGGGAGTCGGAGGGCTCTGTGGACTGCCCTACTCTGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
||
| CDS CCA 72 bp | CCTTCGAGAACCACGGCGTCCCCGCAGCTTGGAGGGTaGAGGAGCCAGCTGAGACTCCCCCAGATCAAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: PSRTTASPQLGG*RSQLRLPQIKS Trigger: ACTCTTGATCTGGGGGAGTCTCAGCTGGCTCCTCCACCCTCCAAGCTGCGGGGACGCCGTGGTTCTCGAAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
||
| CDS CCA 72 bp | GAAGGCGGGGAGGCAGCACGCATGCTCTTTACAACCTaGATACTGTCTTCAGCTAGTGGAGGCAGGCCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: EGGEAARMLFTT*ILSSASGGRPN Trigger: GTTGGGCCTGCCTCCACTAGCTGAAGACAGTATCCAGGTTGTAAAGAGCATGCGTGCTGCCTCCCCGCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
||
| CDS GCA 72 bp | GCAGTGCAATCATGTACTGGGGGAGGCTGTACAGCATaGCCTGGTAGAGGATTTCACTCGGTGTTTCTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: AVQSCTGGGCTA*PGRGFHSVFLV Trigger: TACCAGAAACACCGAGTGAAATCCTCTACCAGGGCATGCTGTACAGCCTCCCCCAGTACATGATTGCACTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
||
| CDS CAA 90 bp | AGAACAGTTACAGGCATCTCTTCAGGCAGGACATCTGCCAGGATATaGATAGAGTCTGTCTTAGCCTTGGAGGTGGGAGCTGCAGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RTVTGISSGRTSARI*IESVLALEVGAAAS Trigger: GCTGGCTGCAGCTCCCACCTCCAAGGCTAAGACAGACTCTATCAATATCCTGGCAGATGTCCTGCCTGAAGAGATGCCTGTAACTGTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
||
| CDS CAA 90 bp | TCAGGCAGGACATCTGCCAGGATATTGATAGAGTCTGTCTTAGCCTaGGAGGTGGGAGCTGCAGCCAGCAGAATCTTAAGCAGTGCAATC | + |
|
Preference number: 6 (lower is better) Translates to: SGRTSARILIESVLA*EVGAAASRILSSAI Trigger: GATTGCACTGCTTAAGATTCTGCTGGCTGCAGCTCCCACCTCCAAGGCTAAGACAGACTCTATCAATATCCTGGCAGATGTCCTGCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
||
| CDS GCA 72 bp | GATCAAGAGTGTAAGAAGGCGGGGAGGCAGCACGCATaGTCTTTACAACCTGGATACTGTCTTCAGCTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: DQECKKAGRQHA*SLQPGYCLQLV Trigger: CACTAGCTGAAGACAGTATCCAGGTTGTAAAGAGCATGCGTGCTGCCTCCCCGCCTTCTTACACTCTTGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
||
| CDS CAA 72 bp | ACAGGCATCTCTTCAGGCAGGACATCTGCCAGGATATaGATAGAGTCTGTCTTAGCCTTGGAGGTGGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: TGISSGRTSARI*IESVLALEVGA Trigger: AGCTCCCACCTCCAAGGCTAAGACAGACTCTATCAATATCCTGGCAGATGTCCTGCCTGAAGAGATGCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
||
| CDS TCA 72 bp | AGGCCCAACTCTGCACGCTTCTGTATTTTGAGAGCCTaGAGGTGCTCAAATCCACCAAGGGTAAACATGACC | + |
|
Preference number: 6 (lower is better) Translates to: RPNSARFCILRA*RCSNPPRVNMT Trigger: GGTCATGTTTACCCTTGGTGGATTTGAGCACCTTCAGGCTCTCAAAATACAGAAGCGTGCAGAGTTGGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
||
| CDS GCA 72 bp | CATCGATGTCATTCCCATAAGCCCAGTCATCATTCATaGGGTGGCGCACTTTCTGGTAAATGGCTGACATGG | + |
|
Preference number: 6 (lower is better) Translates to: HRCHSHKPSHHS*GGALSGKWLTW Trigger: CCATGTCAGCCATTTACCAGAAAGTGCGCCACCGCATGAATGATGACTGGGCTTATGGGAATGACATCGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS CCA 72 bp | AGGTCCCCATCTGGTAGAGCAGGAAGCAATTGTATCTaGACCAGTGTAGCACATCGACCTCGGAATCACATT | + |
|
Preference number: 6 (lower is better) Translates to: RSPSGRAGSNCI*TSVAHRPRNHI Trigger: AATGTGATTCCGAGGTCGATGTGCTACACTGGTCCAGATACAATTGCTTCCTGCTCTACCAGATGGGGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
||
| CDS CAA 72 bp | GGCTTATCATATCGGCGGCTGTTAAAAGCCTCAATGTaGGCCCTCAGGGTACATTCTTCTGCTTGGAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GLSYRRLLKASM*ALRVHSSAWKS Trigger: GGACTTCCAAGCAGAAGAATGTACCCTGAGGGCCAACATTGAGGCTTTTAACAGCCGCCGATATGATAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
||
| CDS CCA 72 bp | TTGTGTCTGTTCACGTCAATGCCTAGCTTCATGCTCTaGAGAACAGTTACAGGCATCTCTTCAGGCAGGACA | + |
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Preference number: 6 (lower is better) Translates to: LCLFTSMPSFML*RTVTGISSGRT Trigger: TGTCCTGCCTGAAGAGATGCCTGTAACTGTTCTCCAGAGCATGAAGCTAGGCATTGACGTGAACAGACACAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
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| CDS TCA 72 bp | TGCAAGCAGTTATCCACAGGTGAGAATTCTGAGTCCTaGGGCTTATCATATCGGCGGCTGTTAAAAGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: CKQLSTGENSES*GLSYRRLLKAS Trigger: TGAGGCTTTTAACAGCCGCCGATATGATAAGCCTCAGGACTCAGAATTCTCACCTGTGGATAACTGCTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046028.12 ENSMUST00000151738.4 |
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| CDS GCA 72 bp | GAGAACAGTTACAGGCATCTCTTCAGGCAGGACATCTaGCAGGATATTGATAGAGTCTGTCTTAGCCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: ENSYRHLFRQDI*QDIDRVCLSLG Trigger: TCCAAGGCTAAGACAGACTCTATCAATATCCTGGCAGATGTCCTGCCTGAAGAGATGCCTGTAACTGTTCTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
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| CDS GCA 72 bp | TTTCCTTGTGTCTGTTCACGTCAATGCCTAGCTTCATaGTCTGGAGAACAGTTACAGGCATCTCTTCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: FPCVCSRQCLAS*SGEQLQASLQA Trigger: TGCCTGAAGAGATGCCTGTAACTGTTCTCCAGAGCATGAAGCTAGGCATTGACGTGAACAGACACAAGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
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| CDS GCA 72 bp | GCTGACTTAAACACCACTAACATCATGGTCCTGGAATaGTTCCATTTGGTCAGCTTATTGAGCAGCCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: ADLNTTNIMVLE*FHLVSLLSSLR Trigger: CCTGAGGCTGCTCAATAAGCTGACCAAATGGAAGCATTCCAGGACCATGATGTTAGTGGTGTTTAAGTCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046028.12 |
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| CDS GCA 72 bp | TACTTGGTCTGTATCTTTAGTAGCATGGTCCTGGAATaGTTCCATTTGGTCAGCTTATTGAGCAGCCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: YLVCIFSSMVLE*FHLVSLLSSLR Trigger: CCTGAGGCTGCTCAATAAGCTGACCAAATGGAAGCATTCCAGGACCATGCTACTAAAGATACAGACCAAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151738.4 |
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| CDS CAA 72 bp | AGGAGCAGGGCAGAGATACTCTTTACAATGATTTCCTaGTGTCTGTTCACGTCAATGCCTAGCTTCATGCTC | + |
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Preference number: 6 (lower is better) Translates to: RSRAEILFTMIS*CLFTSMPSFML Trigger: GAGCATGAAGCTAGGCATTGACGTGAACAGACACAAGGAAATCATTGTAAAGAGTATCTCTGCCCTGCTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
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| CDS CAA 90 bp | CCAACCAAGGTATCTGTGTCCTGCCCCAGAGTGAATCCAATGAACTaGTTTCTGCTCATCTCCAAGAAGTGTTCAATATCCTTCTGTCTA | + |
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Preference number: 6 (lower is better) Translates to: PTKVSVSCPRVNPMN*FLLISKKCSISFCL Trigger: TAGACAGAAGGATATTGAACACTTCTTGGAGATGAGCAGAAACAAGTTCATTGGATTCACTCTGGGGCAGGACACAGATACCTTGGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
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| CDS TCA 72 bp | GAAGTAGAAGGAGCAGGGCAGAGATACTCTTTACAATaGTTTCCTTGTGTCTGTTCACGTCAATGCCTAGCT | + |
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Preference number: 6 (lower is better) Translates to: EVEGAGQRYSLQ*FPCVCSRQCLA Trigger: AGCTAGGCATTGACGTGAACAGACACAAGGAAATCATTGTAAAGAGTATCTCTGCCCTGCTCCTTCTACTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
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| CDS CCA 72 bp | ATATACTTGTGCTGCTTTAGAGTCTTCACACTCTCATaGATGGGTCGAGGTAATCCAACCAAGGTATCTGTG | + |
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Preference number: 6 (lower is better) Translates to: IYLCCFRVFTLS*MGRGNPTKVSV Trigger: CACAGATACCTTGGTTGGATTACCTCGACCCATCCATGAGAGTGTGAAGACTCTAAAGCAGCACAAGTATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
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| CDS CCA 72 bp | CCAGCTCCTCTTCATTCTTTATCTGTATATCTGCAATaGAGATATACTTGTGCTGCTTTAGAGTCTTCACAC | + |
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Preference number: 6 (lower is better) Translates to: PAPLHSLSVYLQ*RYTCAALESSH Trigger: GTGTGAAGACTCTAAAGCAGCACAAGTATATCTCCATTGCAGATATACAGATAAAGAATGAAGAGGAGCTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046028.12 ENSMUST00000115224.8 ENSMUST00000151738.4 |
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