Pregenerated sensors for STRC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033498Ensembl transcript IDs: ENSMUST00000038389.15, ENSMUST00000129136.8
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTAGCTCTGTCCAGATACAGGCCCGCAGGCTCTCTCGAACACCAGTaGGCAGCTGGTAGAGCATGTGTACCACATCAAGAAAGTCAACCA | + |
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Preference number: 1 (lower is better) Translates to: VALSRYRPAGSLEHQ*AAGRACVPHQESQP Trigger: TGGTTGACTTTCTTGATGTGGTACACATGCTCTACCAGCTGCCCACTGGTGTTCGAGAGAGCCTGCGGGCCTGTATCTGGACAGAGCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129136.8 |
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| 3UTR-3UTR GCA 90 bp | TCCATCAGCTGGATCGGCAAGTCCAGGAGTAGCTTTGTGTCAAGTTCACTCAGTCTGGGGAAAGAGAGGTaGCCAGACCCTCAGCTCTCG | + |
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Preference number: 2 (lower is better) Translates to: SISWIGKSRSSFVSSSLSLGKER*PDPQLS Trigger: CGAGAGCTGAGGGTCTGGGCACCTCTCTTTCCCCAG...ACTGAGTGAACTTGACACAAAGCTACTCCTGGACTTGCCGATCCAGCTGATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129136.8 |
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| 3UTR CCA 72 bp | GCAAGAGGCGTATATGCCAGGAGCACAGTTCTCAGGTaGGTGGAATGCATTGGAATTTTACCCACAATCCTC | + |
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Preference number: 3 (lower is better) Translates to: ARGVYARSTVLR*VECIGILPTIL Trigger: GAGGATTGTGGGTAAAATTCCAATGCATTCCACCCACCTGAGAACTGTGCTCCTGGCATATACGCCTCTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR CCA 90 bp | ACAGTGAGGTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTTCTCGGTAGGAGGAGGCCGTaGGGTGGTAGGAGGGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: TVRLFMMARGVYARSTVLGRRRP*GGRRGP Trigger: CGGCCCCCTCCTACCACCCCACGGCCTCCTCCTACC...GAGAACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAACCTCACTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR GCA 90 bp | AACAACAGAACAGCCTGGGCAGGTGTGACACTGGCTCCCTGTAGGGCAGGAAGCCCTCCCCATCCTCCATaGTCTGGTTTACTAGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: NNRTAWAGVTLAPCRAGSPPHPP*SGLLGY Trigger: GTAGCCTAGTAAACCAGAGCATGGAGGATGGGGAGG...GCTTCCTGCCCTACAGGGAGCCAGTGTCACACCTGCCCAGGCTGTTCTGTTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129136.8 |
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| CDS-3UTR GCA 90 bp | GGAAGGAGCCTTCCAAACAACAGAACAGCCTGGGCAGGTGTGACACTGGCTCCCTCCCAGAAGTTCATATaGCACCTGAGCACCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GRSLPNNRTAWAGVTLAPSQKFI*HLSTCS Trigger: GGAGCAGGTGCTCAGGTGGCATATGAACTTCTGGGA...GGGAGCCAGTGTCACACCTGCCCAGGCTGTTCTGTTGTTTGGAAGGCTCCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129136.8 |
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| CDS-3UTR TCA 90 bp | ACAGTGAGGTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTTCTCCAGCCTGGGCAGGTGTaGCACTGGCTCCCTGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: TVRLFMMARGVYARSTVLQPGQV*HWLPVG Trigger: CCCTACAGGGAGCCAGTGTCACACCTGCCCAGGCTG...GAGAACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAACCTCACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR CCA 90 bp | GTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTTCTCAGGTGGGTCCTCTCCAGTGTCTCTaGGCCCAAAGCCTCCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: VIHDGKRRICQEHSSQVGPLQCL*AQSLPG Trigger: CCCAGGGAGGCTTTGGGCCCAGAGACACTGGAGAGG...ACCCACCTGAGAACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR TCA 90 bp | ACAGTGAGGTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTTCTCGGTGGCCAAAAATGCTaGCGGGCAATGCCAGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: TVRLFMMARGVYARSTVLGGQKC*RAMPGP Trigger: GGGCCCTGGCATTGCCCGTCAGCATTTTTGGCCACC...GAGAACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAACCTCACTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR TCA 90 bp | ACAATCTGTCCATCAGCTGGATCGGCAAGTCCAGGAGTAGCTTTGTGTCAAGTTAGGGCCTGGATCTGGTaGGGGCTGAGCTGGAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: TICPSAGSASPGVALCQVRAWIW*GLSWRK Trigger: CTTTCTCCAGCTCAGCCCTCACCAGATCCAGGCCCT...AACTTGACACAAAGCTACTCCTGGACTTGCCGATCCAGCTGATGGACAGATTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129136.8 |
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| CDS-3UTR CCA 90 bp | AGAAACAGTGAGGTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTGCTAGGAGGGGGTTGTaGGGTGGTAGGAGGAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: RNSEVIHDGKRRICQEHSARRGL*GGRRRP Trigger: AGGCCTCCTCCTACCACCCCACAACCCCCTCCTAGC...ACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAACCTCACTGTTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR CCA 90 bp | GTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTTCTCAGGTGGGTTCGACCCAGCTGCTCTaGGATCTCCTTCCCTTCGTG | + |
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Preference number: 4 (lower is better) Translates to: VIHDGKRRICQEHSSQVGSTQLL*DLLPFV Trigger: CACGAAGGGAAGGAGATCCCAGAGCAGCTGGGTCGA...ACCCACCTGAGAACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR TCA 90 bp | AACAGTGAGGTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTTCTGAGAGCAGCAGGGCTTaGCCTAACATCCCCTGCGTC | + |
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Preference number: 4 (lower is better) Translates to: NSEVIHDGKRRICQEHSSESSRA*PNIPCV Trigger: GACGCAGGGGATGTTAGGTCAAGCCCTGCTGCTCTC...AGAACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAACCTCACTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR TCA 90 bp | AGAAACAGTGAGGTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTAGGGCCTGGATCTGGTaGGGGCTGAGCTGGAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: RNSEVIHDGKRRICQEHSRAWIW*GLSWRK Trigger: CTTTCTCCAGCTCAGCCCTCACCAGATCCAGGCCCT...ACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAACCTCACTGTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR TCA 90 bp | TCCATCAGCTGGATCGGCAAGTCCAGGAGTAGCTTTGTGTCAAGTTCACTCAGTAGTTCATATGCCACCTaGGCACCTGCTCCTCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: SISWIGKSRSSFVSSSLSSSYAT*APAPPH Trigger: ATGGGGAGGAGCAGGTGCTCAGGTGGCATATGAACT...ACTGAGTGAACTTGACACAAAGCTACTCCTGGACTTGCCGATCCAGCTGATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129136.8 |
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| CDS-3UTR GCA 90 bp | GTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTTCTCAGGTGGGTTTCCTGTCCCAGGAGTaGCAGCACATCTCCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: VIHDGKRRICQEHSSQVGFLSQE*QHISQK Trigger: CTTCTGGGAGATGTGCTGGCACTCCTGGGACAGGAA...ACCCACCTGAGAACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR GCA 90 bp | AGAAACAGTGAGGTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTCTGGGGAAAGAGAGGTaGCCAGACCCTCAGCTCTCG | + |
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Preference number: 4 (lower is better) Translates to: RNSEVIHDGKRRICQEHSLGKER*PDPQLS Trigger: CGAGAGCTGAGGGTCTGGGCACCTCTCTTTCCCCAG...ACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAACCTCACTGTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR TCA 90 bp | ACAGTGAGGTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTTCTCCCCACAGTACAGGACTaGAGCAGGACAGAAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: TVRLFMMARGVYARSTVLPTVQD*SRTEAP Trigger: TGGAGCTTCTGTCCTGCTTCAGTCCTGTACTGTGGG...GAGAACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAACCTCACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR GCA 90 bp | ACAGTGAGGTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTTCTCATCATGAAGTCGAAGTaGAGGGGGCTGGAGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: TVRLFMMARGVYARSTVLIMKSK*RGLERW Trigger: CCACCTCTCCAGCCCCCTGCACTTCGACTTCATGAT...GAGAACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAACCTCACTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR GCA 90 bp | ACAGTGAGGTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTTCTCGAGTTTCGACCCAGCTaGTCTGGGATCTCCTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: TVRLFMMARGVYARSTVLEFRPS*SGISFP Trigger: AGGGAAGGAGATCCCAGAGCAGCTGGGTCGAAACTC...GAGAACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAACCTCACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR CCA 90 bp | ACAGTGAGGTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTTCTCGCCCCAGAATATTTCTaGGGTGAGGGGCACAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: TVRLFMMARGVYARSTVLAPEYF*GEGHRD Trigger: ATCCCTGTGCCCCTCACCCCAGAAATATTCTGGGGC...GAGAACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAACCTCACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR CCA 90 bp | GTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTTCTCAGGTGGGTTTTGGTACAGGCTCTTaGAGACCCTCAGCAGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: VIHDGKRRICQEHSSQVGFGTGS*RPSAAG Trigger: TCCAGCTGCTGAGGGTCTCCAAGAGCCTGTACCAAA...ACCCACCTGAGAACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR GCA 90 bp | AACAGTGAGGTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTTCTCCCTCAGCAGCTGGATaGACAATCCCAGCTACCAGA | + |
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Preference number: 4 (lower is better) Translates to: NSEVIHDGKRRICQEHSSPSAAG*TIPATR Trigger: TCTGGTAGCTGGGATTGTGCATCCAGCTGCTGAGGG...AGAACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAACCTCACTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR GCA 90 bp | ACAGTGAGGTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTTCTCGGTTCCCCGTATGTCTaGACAGTTTGGTACAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: TVRLFMMARGVYARSTVLGSPYV*TVWYRL Trigger: GAGCCTGTACCAAACTGTGCAGACATACGGGGAACC...GAGAACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAACCTCACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR GCA 90 bp | AGAAACAGTGAGGTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTGAGCCAGGTCTGGGATaGCAGCTGCTATTGTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: RNSEVIHDGKRRICQEHSEPGLG*QLLLCQ Trigger: TTGGCACAATAGCAGCTGGCATCCCAGACCTGGCTC...ACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAACCTCACTGTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR TCA 90 bp | AACAGTGAGGTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTTCTCATAAAAGCAGCTGTTaGAGGTTGCCTCCCTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: NSEVIHDGKRRICQEHSSHKSSC*RLPPWH Trigger: GTGCCAGGGAGGCAACCTTCAACAGCTGCTTTTATG...AGAACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAACCTCACTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR GCA 90 bp | ACAGTGAGGTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTTCTCAAGCCAGCACAGAGCTaGTTTACCAAAGGACGACTG | + |
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Preference number: 4 (lower is better) Translates to: TVRLFMMARGVYARSTVLKPAQS*FTKGRL Trigger: CAGTCGTCCTTTGGTAAAGCAGCTCTGTGCTGGCTT...GAGAACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAACCTCACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR GCA 90 bp | AACAGTGAGGTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTTCTCCTCCCCATCCTCCATaGTCTGGTTTACTAGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: NSEVIHDGKRRICQEHSSPPHPP*SGLLGY Trigger: GTAGCCTAGTAAACCAGAGCATGGAGGATGGGGAGG...AGAACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAACCTCACTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR GCA 90 bp | AACAGTGAGGTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTTCTAGAAACTGTGCCTGTTaGTCAGACCAAGGCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: NSEVIHDGKRRICQEHSSRNCAC*SDQGSC Trigger: GCAGCTGCCTTGGTCTGAGCAACAGGCACAGTTTCT...AGAACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAACCTCACTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR CCA 90 bp | AGAAACAGTGAGGTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTTTACCAAAGGACGACTaGGGCCAGACAGGGCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: RNSEVIHDGKRRICQEHSLPKDD*GQTGLK Trigger: TTTCAGCCCTGTCTGGCCCCAGTCGTCCTTTGGTAA...ACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAACCTCACTGTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR CCA 90 bp | ACAGTGAGGTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTTCTCAATCTGTCCATCAGCTaGATCGGCAAGTCCAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: TVRLFMMARGVYARSTVLNLSIS*IGKSRS Trigger: ACTCCTGGACTTGCCGATCCAGCTGATGGACAGATT...GAGAACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAACCTCACTGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR CCA 90 bp | GTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTTCTCAGGTGGGTGATTGGGGTCTCCTTTaGAGCCAGGTTTTTAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: VIHDGKRRICQEHSSQVGDWGLL*SQVFKC Trigger: GCACTTAAAAACCTGGCTCCAAAGGAGACCCCAATC...ACCCACCTGAGAACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR TCA 90 bp | ATTTTACCCACAATCCTCATCCACTTACTGAGAATAATTAGTATGCACTTCCATTGTCGAGGGCTGATGTaGGCCGCAGGCTGGGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: ILPTILIHLLRIISMHFHCRGLM*AAGWEA Trigger: GGCTTCCCAGCCTGCGGCTCACATCAGCCCTCGACA...ATGGAAGTGCATACTAATTATTCTCAGTAAGTGGATGAGGATTGTGGGTAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR GCA 90 bp | GGAATTTTACCCACAATCCTCATCCACTTACTGAGAATAATTAGTATGCACTTCGGCCAAGTGGTGGGCTaGCCAGGAATGCACACGGCT | + |
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Preference number: 4 (lower is better) Translates to: GILPTILIHLLRIISMHFGQVVG*PGMHTA Trigger: AGCCGTGTGCATTCCTGGGCAGCCCACCACTTGGCC...GAAGTGCATACTAATTATTCTCAGTAAGTGGATGAGGATTGTGGGTAAAATTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR GCA 90 bp | AACAGTGAGGTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTTCTCTTCCAGAGAAACTGTaGCTGTTGCTCAGACCAAGG | + |
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Preference number: 4 (lower is better) Translates to: NSEVIHDGKRRICQEHSSLPEKL*LLLRPR Trigger: CCTTGGTCTGAGCAACAGGCACAGTTTCTCTGGAAG...AGAACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAACCTCACTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR GCA 90 bp | AGAAACAGTGAGGTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTGGGGTTGAAGACCACTaGAAACTTGGGAGCAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: RNSEVIHDGKRRICQEHSGVEDH*KLGSRN Trigger: ATTCCTGCTCCCAAGTTTGCAGTGGTCTTCAACCCC...ACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAACCTCACTGTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR CCA 90 bp | GTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTTCTCAGGTGGGTACTGGCATCAGGCTCTaGCTGTCCCATAATAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: VIHDGKRRICQEHSSQVGTGIRL*LSHNRK Trigger: TTTTCTATTATGGGACAGCCAGAGCCTGATGCCAGT...ACCCACCTGAGAACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR CCA 90 bp | CCCACAATCCTCATCCACTTACTGAGAATAATTAGTATGCACTTCCATTTACAAGACCCCACAACTGCTTaGCCTTGCCCATGGCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: PTILIHLLRIISMHFHLQDPTTA*PCPWLP Trigger: GGGCAGCCATGGGCAAGGCCAAGCAGTTGTGGGGTC...TTGTAAATGGAAGTGCATACTAATTATTCTCAGTAAGTGGATGAGGATTGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR TCA 90 bp | ATTTTACCCACAATCCTCATCCACTTACTGAGAATAATTAGTATGCACTTCCATAGGCCCAGTAGGGGCTaGAGTCACTTCCTGCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: ILPTILIHLLRIISMHFHRPSRG*SHFLRQ Trigger: CTGCCGCAGGAAGTGACTTCAGCCCCTACTGGGCCT...ATGGAAGTGCATACTAATTATTCTCAGTAAGTGGATGAGGATTGTGGGTAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR TCA 90 bp | CCCACAATCCTCATCCACTTACTGAGAATAATTAGTATGCACTTCCATTTACAACTTGTGGGCAAGCTGTaGCTCCCCACACAGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: PTILIHLLRIISMHFHLQLVGKL*LPTQMA Trigger: GGCCATCTGTGTGGGGAGTCACAGCTTGCCCACAAG...TTGTAAATGGAAGTGCATACTAATTATTCTCAGTAAGTGGATGAGGATTGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR GCA 90 bp | ACAGTGAGGTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTTCTCAAAGGTTGTTCCGCATaGCCCATAAAAGCAGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: TVRLFMMARGVYARSTVLKGCSA*PIKAAV Trigger: AACAGCTGCTTTTATGGGGCATGCGGAACAACCTTT...GAGAACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAACCTCACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR GCA 90 bp | TGCATTGGAATTTTACCCACAATCCTCATCCACTTACTGAGAATAATTAGTATGGGGGGACCCCACAACTaGTTGGCCTTGCCCATGGCT | + |
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Preference number: 4 (lower is better) Translates to: CIGILPTILIHLLRIISMGGPHN*LALPMA Trigger: AGCCATGGGCAAGGCCAAGCAGTTGTGGGGTCCCCC...CATACTAATTATTCTCAGTAAGTGGATGAGGATTGTGGGTAAAATTCCAATGCA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR CCA 90 bp | ATTTTACCCACAATCCTCATCCACTTACTGAGAATAATTAGTATGCACTTCCATAGGAGAAGGAGCAGCTaGGGCTGGAGGCTCAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: ILPTILIHLLRIISMHFHRRRSS*GWRLRA Trigger: GGCTCTGAGCCTCCAGCCCCAGCTGCTCCTTCTCCT...ATGGAAGTGCATACTAATTATTCTCAGTAAGTGGATGAGGATTGTGGGTAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR CCA 90 bp | GGAATTTTACCCACAATCCTCATCCACTTACTGAGAATAATTAGTATGCACTTCGTTCTGGCCCTAGGGTaGTCAGCTCTGGCTCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: GILPTILIHLLRIISMHFVLALG*SALALA Trigger: TGCCAGAGCCAGAGCTGACCACCCTAGGGCCAGAAC...GAAGTGCATACTAATTATTCTCAGTAAGTGGATGAGGATTGTGGGTAAAATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR CCA 90 bp | AGAAACAGTGAGGTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTCTGGCTCCACAATTCTaGTTTTCCAAGAACAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: RNSEVIHDGKRRICQEHSLAPQF*FSKNRL Trigger: GAGCCTGTTCTTGGAAAACCAGAATTGTGGAGCCAG...ACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAACCTCACTGTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR TCA 90 bp | CCCACAATCCTCATCCACTTACTGAGAATAATTAGTATGCACTTCCATTTACAACCAGCATCCAAAGACTaGGGCCCAGTAGGGGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: PTILIHLLRIISMHFHLQPASKD*GPVGAE Trigger: TTCAGCCCCTACTGGGCCTCAGTCTTTGGATGCTGG...TTGTAAATGGAAGTGCATACTAATTATTCTCAGTAAGTGGATGAGGATTGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR TCA 90 bp | GGAATTTTACCCACAATCCTCATCCACTTACTGAGAATAATTAGTATGCACTTCCTGAGCTGTGATCCCTaGTGGCAGCCAGGACACTGT | + |
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Preference number: 4 (lower is better) Translates to: GILPTILIHLLRIISMHFLSCDP*WQPGHC Trigger: ACAGTGTCCTGGCTGCCATCAGGGATCACAGCTCAG...GAAGTGCATACTAATTATTCTCAGTAAGTGGATGAGGATTGTGGGTAAAATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR GCA 90 bp | CCCACAATCCTCATCCACTTACTGAGAATAATTAGTATGCACTTCCATTTACAAGCTGAAGTCACTTCCTaGGGCAGGAGCGACAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: PTILIHLLRIISMHFHLQAEVTS*GRSDRR Trigger: TCTCCTGTCGCTCCTGCCGCAGGAAGTGACTTCAGC...TTGTAAATGGAAGTGCATACTAATTATTCTCAGTAAGTGGATGAGGATTGTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR GCA 90 bp | ATTTTACCCACAATCCTCATCCACTTACTGAGAATAATTAGTATGCACTTCCATCCAAGCCTGAGCACCTaGTCCTCCCCATCCTCCATG | + |
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Preference number: 4 (lower is better) Translates to: ILPTILIHLLRIISMHFHPSLST*SSPSSM Trigger: CATGGAGGATGGGGAGGAGCAGGTGCTCAGGCTTGG...ATGGAAGTGCATACTAATTATTCTCAGTAAGTGGATGAGGATTGTGGGTAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR GCA 90 bp | CCCACAATCCTCATCCACTTACTGAGAATAATTAGTATGCACTTCCATTTACAAACCACGGCTCGGAGCTaGATGGAACTCCAGCCATCT | + |
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Preference number: 4 (lower is better) Translates to: PTILIHLLRIISMHFHLQTTARS*MELQPS Trigger: AGATGGCTGGAGTTCCATGCAGCTCCGAGCCGTGGT...TTGTAAATGGAAGTGCATACTAATTATTCTCAGTAAGTGGATGAGGATTGTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR GCA 90 bp | GGAATTTTACCCACAATCCTCATCCACTTACTGAGAATAATTAGTATGCACTTCGAAACTCGCAGGTCATaGCTCCTGCCAAGTTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: GILPTILIHLLRIISMHFETRRS*LLPSCP Trigger: TGGGCAACTTGGCAGGAGGCATGACCTGCGAGTTTC...GAAGTGCATACTAATTATTCTCAGTAAGTGGATGAGGATTGTGGGTAAAATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR CCA 90 bp | TGCATTGGAATTTTACCCACAATCCTCATCCACTTACTGAGAATAATTAGTATGAGTCTGGCCAAGTGGTaGGCTGCCCAGGAATGCACA | + |
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Preference number: 4 (lower is better) Translates to: CIGILPTILIHLLRIISMSLAKW*AAQECT Trigger: TGTGCATTCCTGGGCAGCCCACCACTTGGCCAGACT...CATACTAATTATTCTCAGTAAGTGGATGAGGATTGTGGGTAAAATTCCAATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR TCA 90 bp | ATTTTACCCACAATCCTCATCCACTTACTGAGAATAATTAGTATGCACTTCCATAGAATATTTCTGGGGTaGGGGGCACAGGGATCAGGC | + |
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Preference number: 4 (lower is better) Translates to: ILPTILIHLLRIISMHFHRIFLG*GAQGSG Trigger: GCCTGATCCCTGTGCCCCTCACCCCAGAAATATTCT...ATGGAAGTGCATACTAATTATTCTCAGTAAGTGGATGAGGATTGTGGGTAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR TCA 90 bp | GGAATTTTACCCACAATCCTCATCCACTTACTGAGAATAATTAGTATGCACTTCGAAAGCACAAGCTGCTaGAGGTCTTCTGGAGGCATG | + |
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Preference number: 4 (lower is better) Translates to: GILPTILIHLLRIISMHFESTSC*RSSGGM Trigger: CATGCCTCCAGAAGACCTTCAGCAGCTTGTGCTTTC...GAAGTGCATACTAATTATTCTCAGTAAGTGGATGAGGATTGTGGGTAAAATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR TCA 90 bp | CCCACAATCCTCATCCACTTACTGAGAATAATTAGTATGCACTTCCATTTACAAGAAGGGGATGAGCGGTaGCATGTCGATAAAGAGTTG | + |
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Preference number: 4 (lower is better) Translates to: PTILIHLLRIISMHFHLQEGDER*HVDKEL Trigger: CAACTCTTTATCGACATGTCACCGCTCATCCCCTTC...TTGTAAATGGAAGTGCATACTAATTATTCTCAGTAAGTGGATGAGGATTGTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR GCA 90 bp | GGAATTTTACCCACAATCCTCATCCACTTACTGAGAATAATTAGTATGCACTTCACCCAGGAAGAGAGCTaGTTGGCTAAACTCCCAACT | + |
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Preference number: 4 (lower is better) Translates to: GILPTILIHLLRIISMHFTQEES*LAKLPT Trigger: AGTTGGGAGTTTAGCCAAGCAGCTCTCTTCCTGGGT...GAAGTGCATACTAATTATTCTCAGTAAGTGGATGAGGATTGTGGGTAAAATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR CCA 90 bp | CCCACAATCCTCATCCACTTACTGAGAATAATTAGTATGCACTTCCATTTACAAAGGAAGAGAGCTGCTTaGCTAAACTCCCAACTGCTG | + |
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Preference number: 4 (lower is better) Translates to: PTILIHLLRIISMHFHLQRKRAA*LNSQLL Trigger: CAGCAGTTGGGAGTTTAGCCAAGCAGCTCTCTTCCT...TTGTAAATGGAAGTGCATACTAATTATTCTCAGTAAGTGGATGAGGATTGTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR TCA 90 bp | CCCACAATCCTCATCCACTTACTGAGAATAATTAGTATGCACTTCCATTTACAAATAACTGGATGGGGTTaGAGACCACTGCAAACTTGG | + |
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Preference number: 4 (lower is better) Translates to: PTILIHLLRIISMHFHLQITGWG*RPLQTW Trigger: CCAAGTTTGCAGTGGTCTTCAACCCCATCCAGTTAT...TTGTAAATGGAAGTGCATACTAATTATTCTCAGTAAGTGGATGAGGATTGTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR CCA 90 bp | TGCATTGGAATTTTACCCACAATCCTCATCCACTTACTGAGAATAATTAGTATGAGCAGAGCTGCAATCTaGCAAGCTGAAAGCCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: CIGILPTILIHLLRIISMSRAAI*QAESLD Trigger: GTCAAGGCTTTCAGCTTGCCAGATTGCAGCTCTGCT...CATACTAATTATTCTCAGTAAGTGGATGAGGATTGTGGGTAAAATTCCAATGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR CCA 90 bp | ATTTTACCCACAATCCTCATCCACTTACTGAGAATAATTAGTATGCACTTCCATTACCATACAGCTGTCTaGCAGATGACAGCTGTGCTA | + |
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Preference number: 4 (lower is better) Translates to: ILPTILIHLLRIISMHFHYHTAV*QMTAVL Trigger: TAGCACAGCTGTCATCTGCCAGACAGCTGTATGGTA...ATGGAAGTGCATACTAATTATTCTCAGTAAGTGGATGAGGATTGTGGGTAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS TCA 90 bp | TGCCAGGGCCCAGGAGGCTTGGAACCAGTCGTAGAGACCCCAGGCTaGGTTTCGACCCAGCTGCTCTGGGATCTCCTTCCCTTCGTGTTG | + |
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Preference number: 5 (lower is better) Translates to: CQGPGGLEPVVETPG*VSTQLLWDLLPFVL Trigger: CAACACGAAGGGAAGGAGATCCCAGAGCAGCTGGGTCGAAACTCAGCCTGGGGTCTCTACGACTGGTTCCAAGCCTCCTGGGCCCTGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS GCA 90 bp | AGGCTGAGGGAGGAGTCTAAGCCTGGTGGGGTTGGCTCTTCCCGCTaGAAGTACTCTCCGACTGTCCTCAGTACACTTCTCCGGCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: RLREESKPGGVGSSR*KYSPTVLSTLLRPS Trigger: AGAGGGCCGGAGAAGTGTACTGAGGACAGTCGGAGAGTACTTGCAGCGGGAAGAGCCAACCCCACCAGGCTTAGACTCCTCCCTCAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS CCA 90 bp | CGCAGACCAGGCCGCTGGGAAGGTTCCCCGTATGTCTGCACAGTTTaGTACAGGCTCTTGGAGACCCTCAGCAGCTGGATGCACAATCCC | + |
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Preference number: 5 (lower is better) Translates to: RRPGRWEGSPYVCTV*YRLLETLSSWMHNP Trigger: GGGATTGTGCATCCAGCTGCTGAGGGTCTCCAAGAGCCTGTACCAAACTGTGCAGACATACGGGGAACCTTCCCAGCGGCCTGGTCTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS GCA 90 bp | GATTTGTGTCGCAGACCAGGCCGCTGGGAAGGTTCCCCGTATGTCTaGACAGTTTGGTACAGGCTCTTGGAGACCCTCAGCAGCTGGATG | + |
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Preference number: 5 (lower is better) Translates to: DLCRRPGRWEGSPYV*TVWYRLLETLSSWM Trigger: CATCCAGCTGCTGAGGGTCTCCAAGAGCCTGTACCAAACTGTGCAGACATACGGGGAACCTTCCCAGCGGCCTGGTCTGCGACACAAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR CAA 90 bp | AACAGTGAGGTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTTCTCTAAGCCTGGTGGGGTaGGCTCTTCCCGCTGCAAGT | + |
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Preference number: 5 (lower is better) Translates to: NSEVIHDGKRRICQEHSSLSLVG*ALPAAS Trigger: ACTTGCAGCGGGAAGAGCCAACCCCACCAGGCTTAG...AGAACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAACCTCACTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR CAA 90 bp | GTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTTCTCAGGTGGGTGCACTTCTTTGGAGATaGGGGTCTCCTTTGGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: VIHDGKRRICQEHSSQVGALLWR*GSPLEP Trigger: TGGCTCCAAAGGAGACCCCAATCTCCAAAGAAGTGC...ACCCACCTGAGAACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR CAA 90 bp | AGAAACAGTGAGGTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTGTTTGGTACAGGCTCTaGGAGACCCTCAGCAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: RNSEVIHDGKRRICQEHSVWYRL*ETLSSW Trigger: CCAGCTGCTGAGGGTCTCCAAGAGCCTGTACCAAAC...ACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAACCTCACTGTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR CAA 90 bp | AGAAACAGTGAGGTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTCTGCTCCTCGGATGGTaGAACCTTCAGCTTAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: RNSEVIHDGKRRICQEHSLLLGW*NLQLSP Trigger: TGGGCTAAGCTGAAGGTTCAACCATCCGAGGAGCAG...ACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAACCTCACTGTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR CAA 90 bp | AACAGTGAGGTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTTCTGAGAAACTGTGCCTGTaGCTCAGACCAAGGCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: NSEVIHDGKRRICQEHSSEKLCL*LRPRQL Trigger: CAGCTGCCTTGGTCTGAGCAACAGGCACAGTTTCTC...AGAACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAACCTCACTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR CAA 90 bp | GGAATTTTACCCACAATCCTCATCCACTTACTGAGAATAATTAGTATGCACTTCGGACCCCACAACTGCTaGGCCTTGCCCATGGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: GILPTILIHLLRIISMHFGPHNC*ALPMAA Trigger: GGCAGCCATGGGCAAGGCCAAGCAGTTGTGGGGTCC...GAAGTGCATACTAATTATTCTCAGTAAGTGGATGAGGATTGTGGGTAAAATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR CAA 90 bp | AACAGTGAGGTTATTCATGATGGCAAGAGGCGTATATGCCAGGAGCACAGTTCTAAGGATGAAGAAATGTaGGCCAGGAACGCAGAGAAC | + |
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Preference number: 5 (lower is better) Translates to: NSEVIHDGKRRICQEHSSKDEEM*ARNAEN Trigger: GTTCTCTGCGTTCCTGGCCAACATTTCTTCATCCTT...AGAACTGTGCTCCTGGCATATACGCCTCTTGCCATCATGAATAACCTCACTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR CAA 90 bp | GGAATTTTACCCACAATCCTCATCCACTTACTGAGAATAATTAGTATGCACTTCGACAGAAGCTCCATCTaGCTCATACCAGAGCCGAGG | + |
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Preference number: 5 (lower is better) Translates to: GILPTILIHLLRIISMHFDRSSI*LIPEPR Trigger: CCTCGGCTCTGGTATGAGCAAGATGGAGCTTCTGTC...GAAGTGCATACTAATTATTCTCAGTAAGTGGATGAGGATTGTGGGTAAAATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR CAA 90 bp | ATTTTACCCACAATCCTCATCCACTTACTGAGAATAATTAGTATGCACTTCCATAGTCCAGGAGTAGCTTaGTGTCAAGTTCACTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: ILPTILIHLLRIISMHFHSPGVA*CQVHSV Trigger: AACTGAGTGAACTTGACACAAAGCTACTCCTGGACT...ATGGAAGTGCATACTAATTATTCTCAGTAAGTGGATGAGGATTGTGGGTAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS-3UTR CAA 90 bp | TGCATTGGAATTTTACCCACAATCCTCATCCACTTACTGAGAATAATTAGTATGGATCATATCCAGAAATaGATCAGGAAACTGATCATG | + |
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Preference number: 5 (lower is better) Translates to: CIGILPTILIHLLRIISMDHIQK*IRKLIM Trigger: CATGATCAGTTTCCTGATCAATTTCTGGATATGATC...CATACTAATTATTCTCAGTAAGTGGATGAGGATTGTGGGTAAAATTCCAATGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS GCA 72 bp | GCAGGCAGTCTGGCCAAGTGGTGGGCTGCCCAGGAATaGACACGGCTGAGCCGGCACCTGCTGCACCCATAT | + |
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Preference number: 6 (lower is better) Translates to: AGSLAKWWAAQE*TRLSRHLLHPY Trigger: ATATGGGTGCAGCAGGTGCCGGCTCAGCCGTGTGCATTCCTGGGCAGCCCACCACTTGGCCAGACTGCCTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS TCA 72 bp | CCAGGAGGCTTGGAACCAGTCGTAGAGACCCCAGGCTaGGTTTCGACCCAGCTGCTCTGGGATCTCCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: PGGLEPVVETPG*VSTQLLWDLLP Trigger: GGGAAGGAGATCCCAGAGCAGCTGGGTCGAAACTCAGCCTGGGGTCTCTACGACTGGTTCCAAGCCTCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS GCA 72 bp | CGCAGACCAGGCCGCTGGGAAGGTTCCCCGTATGTCTaGACAGTTTGGTACAGGCTCTTGGAGACCCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: RRPGRWEGSPYV*TVWYRLLETLS Trigger: GCTGAGGGTCTCCAAGAGCCTGTACCAAACTGTGCAGACATACGGGGAACCTTCCCAGCGGCCTGGTCTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS CAA 90 bp | TCGCAGACCAGGCCGCTGGGAAGGTTCCCCGTATGTCTGCACAGTTaGGTACAGGCTCTTGGAGACCCTCAGCAGCTGGATGCACAATCC | + |
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Preference number: 6 (lower is better) Translates to: SQTRPLGRFPVCLHS*VQALGDPQQLDAQS Trigger: GGATTGTGCATCCAGCTGCTGAGGGTCTCCAAGAGCCTGTACCAAACTGTGCAGACATACGGGGAACCTTCCCAGCGGCCTGGTCTGCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS CAA 72 bp | AGGCCGCTGGGAAGGTTCCCCGTATGTCTGCACAGTTaGGTACAGGCTCTTGGAGACCCTCAGCAGCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: RPLGRFPVCLHS*VQALGDPQQLD Trigger: ATCCAGCTGCTGAGGGTCTCCAAGAGCCTGTACCAAACTGTGCAGACATACGGGGAACCTTCCCAGCGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS GCA 72 bp | GAGGAGTCTAAGCCTGGTGGGGTTGGCTCTTCCCGCTaGAAGTACTCTCCGACTGTCCTCAGTACACTTCTC | + |
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Preference number: 6 (lower is better) Translates to: EESKPGGVGSSR*KYSPTVLSTLL Trigger: GAGAAGTGTACTGAGGACAGTCGGAGAGTACTTGCAGCGGGAAGAGCCAACCCCACCAGGCTTAGACTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS CCA 72 bp | GCTTTGATGCTTTCCCAGAAGCCTCTCCAGTGTCTCTaGGCCCAAAGCCTCCCTGGGGATCGAGGAAATAGC | + |
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Preference number: 6 (lower is better) Translates to: ALMLSQKPLQCL*AQSLPGDRGNS Trigger: GCTATTTCCTCGATCCCCAGGGAGGCTTTGGGCCCAGAGACACTGGAGAGGCTTCTGGGAAAGCATCAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS CCA 72 bp | GTTCCCCGTATGTCTGCACAGTTTGGTACAGGCTCTTaGAGACCCTCAGCAGCTGGATGCACAATCCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: VPRMSAQFGTGS*RPSAAGCTIPA Trigger: AGCTGGGATTGTGCATCCAGCTGCTGAGGGTCTCCAAGAGCCTGTACCAAACTGTGCAGACATACGGGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS CAA 72 bp | CACAGTACAGGACTGAAGCAGGACAGAAGCTCCATCTaGCTCATACCAGAGCCGAGGCTGAGGGAGGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: HSTGLKQDRSSI*LIPEPRLREES Trigger: AGACTCCTCCCTCAGCCTCGGCTCTGGTATGAGCAAGATGGAGCTTCTGTCCTGCTTCAGTCCTGTACTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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| CDS CAA 90 bp | AGTAGATCCCACAGTACAGGACTGAAGCAGGACAGAAGCTCCATCTaGCTCATACCAGAGCCGAGGCTGAGGGAGGAGTCTAAGCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: SRSHSTGLKQDRSSI*LIPEPRLREESKPG Trigger: ACCAGGCTTAGACTCCTCCCTCAGCCTCGGCTCTGGTATGAGCAAGATGGAGCTTCTGTCCTGCTTCAGTCCTGTACTGTGGGATCTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038389.15 |
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