Pregenerated sensors for STRADB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026027Ensembl transcript IDs: ENSMUST00000027185.11, ENSMUST00000114296.8, ENSMUST00000123301.8, ENSMUST00000153990.8
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCACTTTTAAGACACTATGCTAGTTTGGATGAAAAATGTGCGATATaGTCTCATGTATCTGAACACCTAGTTGGTGTTGGTGATCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: PLLRHYASLDEKCAI*SHVSEHLVGVGDQL Trigger: GAGCTGATCACCAACACCAACTAGGTGTTCAGATACATGAGACCATATCGCACATTTTTCATCCAAACTAGCATAGTGTCTTAAAAGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027185.11 |
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| 3UTR GCA 90 bp | TCAAGGTTTACCCCACTACAGAAACAAGCATATAAAAGGCCAACATaGCATTTGTCTCTAGGAGATTGCCTGAAGTTTATACCATGTTAT | + |
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Preference number: 1 (lower is better) Translates to: SRFTPLQKQAYKRPT*HLSLGDCLKFIPCY Trigger: ATAACATGGTATAAACTTCAGGCAATCTCCTAGAGACAAATGGCATGTTGGCCTTTTATATGCTTGTTTCTGTAGTGGGGTAAACCTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027185.11 |
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| 3UTR-3UTR GCA 90 bp | AAGATGCTCTGGAAGCAGTGTCCTCCGAGGAAGGGTTCATTCCCCAGAGAACAGAAGAAGCGGGGGATGTaGGGAAGGGCGGGCGAGCGG | + |
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Preference number: 2 (lower is better) Translates to: KMLWKQCPPRKGSFPREQKKRGM*GRAGER Trigger: CCGCTCGCCCGCCCTTCCGCACATCCCCCGCTTCTT...CTGTTCTCTGGGGAATGAACCCTTCCTCGGAGGACACTGCTTCCAGAGCATCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027185.11 ENSMUST00000123301.8 ENSMUST00000153990.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTCTGGAAGCAGTGTCCTCCGAGGAAGGGTTCATTCCCCAGAGAACAGTAAAAAGAAGCGGGGGATGTaGGGAAGGGCGGGCGAGCGG | + |
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Preference number: 2 (lower is better) Translates to: CSGSSVLRGRVHSPENSKKKRGM*GRAGER Trigger: CCGCTCGCCCGCCCTTCCGCACATCCCCCGCTTCTT...TTTACTGTTCTCTGGGGAATGAACCCTTCCTCGGAGGACACTGCTTCCAGAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000027185.11 ENSMUST00000123301.8 ENSMUST00000153990.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGAAAAGAAGCGGGGGATGTGCGGAAGGGCGGGCGAGCGGACACTAGCTGAGTTGTCATCAGGAAACTaGAATTCCAGCTCGCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: VEKKRGMCGRAGERTLAELSSGN*NSSSLH Trigger: GTGGAGCGAGCTGGAATTCCAGTTTCCTGATGACAA...CTCAGCTAGTGTCCGCTCGCCCGCCCTTCCGCACATCCCCCGCTTCTTTTCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123301.8 ENSMUST00000153990.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGAAGAGAAGATGCTCTGGAAGCAGTGTCCTCCGAGGAAGGGTTCATTCCCCGAAGAGAAGATGCTCTaGAAGCAGTGTCCTCCGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LEEKMLWKQCPPRKGSFPEEKML*KQCPPR Trigger: CCTCGGAGGACACTGCTTCCAGAGCATCTTCTCTTC...GGGGAATGAACCCTTCCTCGGAGGACACTGCTTCCAGAGCATCTTCTCTTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027185.11 ENSMUST00000123301.8 ENSMUST00000153990.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGCATGCTCTCTACTCTCCAGTGCCAACCCAGCATGCACACTGTGGTATGAATCTGGTGAACGGACATaGATGGTGGGCACCAGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: KACSLLSSANPACTLWYESGERT*MVGTSV Trigger: AACACTGGTGCCCACCATTCATGTCCGTTCACCAGA...TTCATACCACAGTGTGCATGCTGGGTTGGCACTGGAGAGTAGAGAGCATGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114296.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGCTAGTGAATCTGGAAGAGAAGATGCTCTGGAAGCAGTGTCCTCCGAGGAAGCGGGTGCTCTGATCTaGGCAGAGAGGGTAAATCCA | + |
|
Preference number: 2 (lower is better) Translates to: KASESGREDALEAVSSEEAGALI*AERVNP Trigger: TGGATTTACCCTCTCTGCCCAGATCAGAGCACCCGC...TTCCTCGGAGGACACTGCTTCCAGAGCATCTTCTCTTCCAGATTCACTAGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027185.11 ENSMUST00000123301.8 ENSMUST00000153990.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGAATTAACTAGCTCAAAAGTTACACTGAGATCCAGAAAGTACCAGTCACAGAAGAAGCGGGGGATGTaGGGAAGGGCGGGCGAGCGG | + |
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Preference number: 2 (lower is better) Translates to: RELTSSKVTLRSRKYQSQKKRGM*GRAGER Trigger: CCGCTCGCCCGCCCTTCCGCACATCCCCCGCTTCTT...CTGTGACTGGTACTTTCTGGATCTCAGTGTAACTTTTGAGCTAGTTAATTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027185.11 ENSMUST00000123301.8 ENSMUST00000153990.8 |
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| 3UTR-3UTR CCA 90 bp | GGGTGCTCTGATCTGGGCAGAGAGGGTAAATCCACGCCCCATGAACAGAGTGGTCTAGAATTCCCACACTaGGTCTTTGTCATCAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: GCSDLGREGKSTPHEQSGLEFPH*VFVIRK Trigger: TTTCCTGATGACAAAGACCCAGTGTGGGAATTCTAG...ACCACTCTGTTCATGGGGCGTGGATTTACCCTCTCTGCCCAGATCAGAGCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123301.8 ENSMUST00000153990.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAGATGCTCTGGAAGCAGTGTCCTCCGAGGAAGGGTTCATTCCCCAGAGAACACTGAGGAAAAATACTaGCATCCAGTGGGCTATACG | + |
|
Preference number: 2 (lower is better) Translates to: RRCSGSSVLRGRVHSPENTEEKY*HPVGYT Trigger: CGTATAGCCCACTGGATGTCAGTATTTTTCCTCAGT...GTTCTCTGGGGAATGAACCCTTCCTCGGAGGACACTGCTTCCAGAGCATCTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123301.8 ENSMUST00000153990.8 |
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| 3UTR-3UTR TCA 90 bp | GGGTGCTCTGATCTGGGCAGAGAGGGTAAATCCACGCCCCATGAACAGAGTGGTTCTCATTCTAGAGTCTaGCTGAGGAAAAATACTGAC | + |
|
Preference number: 2 (lower is better) Translates to: GCSDLGREGKSTPHEQSGSHSRV*LRKNTD Trigger: GTCAGTATTTTTCCTCAGTCAGACTCTAGAATGAGA...ACCACTCTGTTCATGGGGCGTGGATTTACCCTCTCTGCCCAGATCAGAGCACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123301.8 ENSMUST00000153990.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGCGATATGGTCTCATGTATCTGAACACCTAGTTGGTGTTGGTGATCAGCTCGCGGGTGCTCTGATCTaGGCAGAGAGGGTAAATCCA | + |
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Preference number: 2 (lower is better) Translates to: CAIWSHVSEHLVGVGDQLAGALI*AERVNP Trigger: TGGATTTACCCTCTCTGCCCAGATCAGAGCACCCGC...GAGCTGATCACCAACACCAACTAGGTGTTCAGATACATGAGACCATATCGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027185.11 |
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| 3UTR-3UTR CCA 90 bp | ACACTGAGATCCAGAAAGTACCAGTCACAGCTTAAAAGGTGGAAAAGAAGCGGGGCGGGTGCTCTGATCTaGGCAGAGAGGGTAAATCCA | + |
|
Preference number: 2 (lower is better) Translates to: TLRSRKYQSQLKRWKRSGAGALI*AERVNP Trigger: TGGATTTACCCTCTCTGCCCAGATCAGAGCACCCGC...CCCGCTTCTTTTCCACCTTTTAAGCTGTGACTGGTACTTTCTGGATCTCAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027185.11 ENSMUST00000123301.8 ENSMUST00000153990.8 |
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| 3UTR-3UTR CCA 90 bp | GTGAATCTGGAAGAGAAGATGCTCTGGAAGCAGTGTCCTCCGAGGAAGGGTTCATTGTCATCAGGAAACTaGAATTCCAGCTCGCTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: VNLEEKMLWKQCPPRKGSLSSGN*NSSSLH Trigger: GTGGAGCGAGCTGGAATTCCAGTTTCCTGATGACAA...TGAACCCTTCCTCGGAGGACACTGCTTCCAGAGCATCTTCTCTTCCAGATTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123301.8 ENSMUST00000153990.8 |
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| 3UTR-3UTR CCA 90 bp | GGGTGCTCTGATCTGGGCAGAGAGGGTAAATCCACGCCCCATGAACAGAGTGGTGCTTTAAAACTCCTATaGATACAGCCATTTTGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: GCSDLGREGKSTPHEQSGALKLL*IQPFWC Trigger: GCACCAAAATGGCTGTATCCATAGGAGTTTTAAAGC...ACCACTCTGTTCATGGGGCGTGGATTTACCCTCTCTGCCCAGATCAGAGCACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000153990.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGAAGAGAAGATGCTCTGGAAGCAGTGTCCTCCGAGGAAGGGTTCATTCCCCTTTATACATTTTTATTaGGCTCCCACAGGGTGCATG | + |
|
Preference number: 2 (lower is better) Translates to: LEEKMLWKQCPPRKGSFPFIHFY*APTGCM Trigger: CATGCACCCTGTGGGAGCTCAATAAAAATGTATAAA...GGGGAATGAACCCTTCCTCGGAGGACACTGCTTCCAGAGCATCTTCTCTTCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027185.11 ENSMUST00000153990.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGCGATATGGTCTCATGTATCTGAACACCTAGTTGGTGTTGGTGATCAGCTCGCTCTCTGCTCCTGCTaGTTTGCCTTCTCTGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: CAIWSHVSEHLVGVGDQLALCSC*FAFSVS Trigger: ACTGACAGAGAAGGCAAAGCAGCAGGAGCAGAGAGC...GAGCTGATCACCAACACCAACTAGGTGTTCAGATACATGAGACCATATCGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027185.11 |
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| 3UTR-3UTR TCA 90 bp | AGAATTCCCACACTGGGTCTTTGTCATCAGGAAACTGGAATTCCAGCTCGCTCCTTCTGTAATAGCATCTaGGTCCTATGCATGTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: RIPTLGLCHQETGIPARSFCNSI*VLCMSW Trigger: CCAGGACATGCATAGGACTCAGATGCTATTACAGAA...GGAGCGAGCTGGAATTCCAGTTTCCTGATGACAAAGACCCAGTGTGGGAATTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123301.8 ENSMUST00000153990.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGATGCTCTGGAAGCAGTGTCCTCCGAGGAAGGGTTCATTCCCCAGAGAACAATTCTAGAGTCTGACTaGGGAAAAATACTGACATCC | + |
|
Preference number: 2 (lower is better) Translates to: EDALEAVSSEEGFIPQRTILESD*GKILTS Trigger: GGATGTCAGTATTTTTCCTCAGTCAGACTCTAGAAT...TGTTCTCTGGGGAATGAACCCTTCCTCGGAGGACACTGCTTCCAGAGCATCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123301.8 ENSMUST00000153990.8 |
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| 3UTR-3UTR CCA 90 bp | CATGCTCTCTACTCTCCAGTGCCAACCCAGCATGCACACTGTGGTATGAACATTGTGAACGGACATGAATaGTGGGCACCAGTGTTATTT | + |
|
Preference number: 2 (lower is better) Translates to: HALYSPVPTQHAHCGMNIVNGHE*WAPVLF Trigger: AAATAACACTGGTGCCCACCATTCATGTCCGTTCAC...AATGTTCATACCACAGTGTGCATGCTGGGTTGGCACTGGAGAGTAGAGAGCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114296.8 |
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| 3UTR-3UTR TCA 90 bp | AAGATGCTCTGGAAGCAGTGTCCTCCGAGGAAGGGTTCATTCCCCAGAGAACAGGTGAATTATTTAATGTaGGCAAGGCTCAGTTTGATG | + |
|
Preference number: 2 (lower is better) Translates to: KMLWKQCPPRKGSFPREQVNYLM*ARLSLM Trigger: CATCAAACTGAGCCTTGCTCACATTAAATAATTCAC...CTGTTCTCTGGGGAATGAACCCTTCCTCGGAGGACACTGCTTCCAGAGCATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027185.11 ENSMUST00000123301.8 ENSMUST00000153990.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGCAGTGTCCTCCGAGGAAGGGTTCATTCCCCAGAGAACAGTAAAATGTAGAACTGAGGAAAAATACTaGCATCCAGTGGGCTATACG | + |
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Preference number: 2 (lower is better) Translates to: EAVSSEEGFIPQRTVKCRTEEKY*HPVGYT Trigger: CGTATAGCCCACTGGATGTCAGTATTTTTCCTCAGT...TCTACATTTTACTGTTCTCTGGGGAATGAACCCTTCCTCGGAGGACACTGCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000123301.8 ENSMUST00000153990.8 |
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| 3UTR-3UTR TCA 90 bp | AAGATGCTCTGGAAGCAGTGTCCTCCGAGGAAGGGTTCATTCCCCAGAGAACAGATAGAGGACATGAAATaGTTTGGCAACCCTAGAATT | + |
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Preference number: 2 (lower is better) Translates to: KMLWKQCPPRKGSFPREQIEDMK*FGNPRI Trigger: AATTCTAGGGTTGCCAAATCATTTCATGTCCTCTAT...CTGTTCTCTGGGGAATGAACCCTTCCTCGGAGGACACTGCTTCCAGAGCATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123301.8 ENSMUST00000153990.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGCTAGTGAATCTGGAAGAGAAGATGCTCTGGAAGCAGTGTCCTCCGAGGAACTAGAATTCCCACACTaGGTCTTTGTCATCAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: KASESGREDALEAVSSEELEFPH*VFVIRK Trigger: TTTCCTGATGACAAAGACCCAGTGTGGGAATTCTAG...TTCCTCGGAGGACACTGCTTCCAGAGCATCTTCTCTTCCAGATTCACTAGCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123301.8 ENSMUST00000153990.8 |
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| 3UTR-3UTR TCA 90 bp | GTGAATCTGGAAGAGAAGATGCTCTGGAAGCAGTGTCCTCCGAGGAAGGGTTCAGTGAATTATTTAATGTaGGCAAGGCTCAGTTTGATG | + |
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Preference number: 2 (lower is better) Translates to: VNLEEKMLWKQCPPRKGSVNYLM*ARLSLM Trigger: CATCAAACTGAGCCTTGCTCACATTAAATAATTCAC...TGAACCCTTCCTCGGAGGACACTGCTTCCAGAGCATCTTCTCTTCCAGATTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027185.11 ENSMUST00000123301.8 ENSMUST00000153990.8 |
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| 3UTR-3UTR TCA 90 bp | AGAATTCCCACACTGGGTCTTTGTCATCAGGAAACTGGAATTCCAGCTCGCTCCATTCTAGAGTCTGACTaGGGAAAAATACTGACATCC | + |
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Preference number: 2 (lower is better) Translates to: RIPTLGLCHQETGIPARSILESD*GKILTS Trigger: GGATGTCAGTATTTTTCCTCAGTCAGACTCTAGAAT...GGAGCGAGCTGGAATTCCAGTTTCCTGATGACAAAGACCCAGTGTGGGAATTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123301.8 ENSMUST00000153990.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGCGATATGGTCTCATGTATCTGAACACCTAGTTGGTGTTGGTGATCAGCTCCCATTAACAACAGCATaGGCTTCAAGGTTTACCCCA | + |
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Preference number: 2 (lower is better) Translates to: CAIWSHVSEHLVGVGDQLPLTTA*ASRFTP Trigger: TGGGGTAAACCTTGAAGCCCATGCTGTTGTTAATGG...GAGCTGATCACCAACACCAACTAGGTGTTCAGATACATGAGACCATATCGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027185.11 |
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| 3UTR-3UTR CCA 90 bp | GAAGATGCTCTGGAAGCAGTGTCCTCCGAGGAAGGGTTCATTCCCCAGAGAACAGACACTATGCTAGTTTaGATGAAAAATGTGCGATAT | + |
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Preference number: 2 (lower is better) Translates to: EDALEAVSSEEGFIPQRTDTMLV*MKNVRY Trigger: ATATCGCACATTTTTCATCCAAACTAGCATAGTGTC...TGTTCTCTGGGGAATGAACCCTTCCTCGGAGGACACTGCTTCCAGAGCATCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027185.11 |
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| 3UTR-3UTR TCA 90 bp | GAAGCAGTGTCCTCCGAGGAAGGGTTCATTCCCCAGAGAACAGTAAAATGTAGATCTCATTCTAGAGTCTaGCTGAGGAAAAATACTGAC | + |
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Preference number: 2 (lower is better) Translates to: EAVSSEEGFIPQRTVKCRSHSRV*LRKNTD Trigger: GTCAGTATTTTTCCTCAGTCAGACTCTAGAATGAGA...TCTACATTTTACTGTTCTCTGGGGAATGAACCCTTCCTCGGAGGACACTGCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000123301.8 ENSMUST00000153990.8 |
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| 3UTR-3UTR CCA 90 bp | ACACTGAGATCCAGAAAGTACCAGTCACAGCTTAAAAGGTGGAAAAGAAGCGGGGAGTCTACTCCTGACTaGGAATTTCTCATTCTAGAG | + |
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Preference number: 2 (lower is better) Translates to: TLRSRKYQSQLKRWKRSGESTPD*EFLILE Trigger: CTCTAGAATGAGAAATTCCCAGTCAGGAGTAGACTC...CCCGCTTCTTTTCCACCTTTTAAGCTGTGACTGGTACTTTCTGGATCTCAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000123301.8 ENSMUST00000153990.8 |
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| 3UTR CAA 90 bp | TTTACCCCACTACAGAAACAAGCATATAAAAGGCCAACATGCCATTaGTCTCTAGGAGATTGCCTGAAGTTTATACCATGTTATGTAAAT | + |
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Preference number: 2 (lower is better) Translates to: FTPLQKQAYKRPTCH*SLGDCLKFIPCYVN Trigger: ATTTACATAACATGGTATAAACTTCAGGCAATCTCCTAGAGACAAATGGCATGTTGGCCTTTTATATGCTTGTTTCTGTAGTGGGGTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027185.11 |
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| 3UTR-3UTR CAA 90 bp | GTGGAAAAGAAGCGGGGGATGTGCGGAAGGGCGGGCGAGCGGACACTAGCTGAGCAGGAGAGAACGTCTTaGTGGATGGCGTATGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: VEKKRGMCGRAGERTLAEQERTS*WMAYGA Trigger: GGCTCCATACGCCATCCACAAAGACGTTCTCTCCTG...CTCAGCTAGTGTCCGCTCGCCCGCCCTTCCGCACATCCCCCGCTTCTTTTCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123301.8 ENSMUST00000153990.8 |
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| 3UTR GCA 72 bp | GTTGGTGTTGGTGATCAGCTCTTCGGCGATGCTCTTTaGCCTACAGGAGGAAGTACGCTGCAGAGGGTGCTC | + |
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Preference number: 3 (lower is better) Translates to: VGVGDQLFGDAL*PTGGSTLQRVL Trigger: GAGCACCCTCTGCAGCGTACTTCCTCCTGTAGGGCAAAGAGCATCGCCGAAGAGCTGATCACCAACACCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027185.11 |
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| 3UTR-3UTR CAA 90 bp | AAGATGCTCTGGAAGCAGTGTCCTCCGAGGAAGGGTTCATTCCCCAGAGAACAGTCCCACACTGGGTCTTaGTCATCAGGAAACTGGAAT | + |
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Preference number: 3 (lower is better) Translates to: KMLWKQCPPRKGSFPREQSHTGS*SSGNWN Trigger: ATTCCAGTTTCCTGATGACAAAGACCCAGTGTGGGA...CTGTTCTCTGGGGAATGAACCCTTCCTCGGAGGACACTGCTTCCAGAGCATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123301.8 ENSMUST00000153990.8 |
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| 3UTR-3UTR CAA 90 bp | AAGGCTAGTGAATCTGGAAGAGAAGATGCTCTGGAAGCAGTGTCCTCCGAGGAATCCCACACTGGGTCTTaGTCATCAGGAAACTGGAAT | + |
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Preference number: 3 (lower is better) Translates to: KASESGREDALEAVSSEESHTGS*SSGNWN Trigger: ATTCCAGTTTCCTGATGACAAAGACCCAGTGTGGGA...TTCCTCGGAGGACACTGCTTCCAGAGCATCTTCTCTTCCAGATTCACTAGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123301.8 ENSMUST00000153990.8 |
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| 3UTR TCA 72 bp | GCACACTGTGGTATGAACATTTCTGGTGAACGGACATaGATGGTGGGCACCAGTGTTATTTACTGGTCAGAT | + |
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Preference number: 3 (lower is better) Translates to: AHCGMNISGERT*MVGTSVIYWSD Trigger: ATCTGACCAGTAAATAACACTGGTGCCCACCATTCATGTCCGTTCACCAGAAATGTTCATACCACAGTGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114296.8 |
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| 3UTR TCA 72 bp | AACCCAGCATGCACACTGTGGTATGAACATTTCTGGTaGACGGACATGAATGGTGGGCACCAGTGTTATTTA | + |
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Preference number: 3 (lower is better) Translates to: NPACTLWYEHFW*TDMNGGHQCYL Trigger: TAAATAACACTGGTGCCCACCATTCATGTCCGTTCACCAGAAATGTTCATACCACAGTGTGCATGCTGGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114296.8 |
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| 3UTR-3UTR CAA 90 bp | AGAGAATTAACTAGCTCAAAAGTTACACTGAGATCCAGAAAGTACCAGTCACAGTCTTCCTATCTCCACTaGCAGTTCATAGTGAGACAC | + |
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Preference number: 3 (lower is better) Translates to: RELTSSKVTLRSRKYQSQSSYLH*QFIVRH Trigger: GTGTCTCACTATGAACTGCAAGTGGAGATAGGAAGA...CTGTGACTGGTACTTTCTGGATCTCAGTGTAACTTTTGAGCTAGTTAATTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153990.8 |
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| 3UTR TCA 72 bp | TACCAGAATAAACCAGCCTGTTCATCTACCAATAGCTaGTCAAAAAGGCTAGTGAATCTGGAAGAGAAGATG | + |
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Preference number: 3 (lower is better) Translates to: YQNKPACSSTNS*SKRLVNLEEKM Trigger: CATCTTCTCTTCCAGATTCACTAGCCTTTTTGATCAGCTATTGGTAGATGAACAGGCTGGTTTATTCTGGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027185.11 ENSMUST00000123301.8 ENSMUST00000153990.8 |
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| 3UTR GCA 72 bp | ACCCCACTACAGAAACAAGCATATAAAAGGCCAACATaGCATTTGTCTCTAGGAGATTGCCTGAAGTTTATA | + |
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Preference number: 3 (lower is better) Translates to: TPLQKQAYKRPT*HLSLGDCLKFI Trigger: TATAAACTTCAGGCAATCTCCTAGAGACAAATGGCATGTTGGCCTTTTATATGCTTGTTTCTGTAGTGGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027185.11 |
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| 3UTR CCA 72 bp | AGACACTATGCTAGTTTGGATGAAAAATGTGCGATATaGTCTCATGTATCTGAACACCTAGTTGGTGTTGGT | + |
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Preference number: 3 (lower is better) Translates to: RHYASLDEKCAI*SHVSEHLVGVG Trigger: ACCAACACCAACTAGGTGTTCAGATACATGAGACCATATCGCACATTTTTCATCCAAACTAGCATAGTGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027185.11 |
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| 3UTR GCA 72 bp | TATAAAAGGCCAACATGCCATTTGTCTCTAGGAGATTaGCTGAAGTTTATACCATGTTATGTAAATTATGTG | + |
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Preference number: 3 (lower is better) Translates to: YKRPTCHLSLGD*LKFIPCYVNYV Trigger: CACATAATTTACATAACATGGTATAAACTTCAGGCAATCTCCTAGAGACAAATGGCATGTTGGCCTTTTATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027185.11 |
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| CDS-3UTR GCA 90 bp | GGTGCTCTGATCTGGGCAGAGAGGGTAAATCCACGCCCCATGAACAGAGTGGTTGAGCCTGAGTGCCCCTaGTCCTCAAGGGAGAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: GALIWAERVNPRPMNRVVEPECP*SSRERG Trigger: CCCCCTCTCCCTTGAGGAGCAGGGGCACTCAGGCTC...AACCACTCTGTTCATGGGGCGTGGATTTACCCTCTCTGCCCAGATCAGAGCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153990.8 |
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| CDS-3UTR GCA 90 bp | AGAAGATGCTCTGGAAGCAGTGTCCTCCGAGGAAGGGTTCATTCCCCAGAGAACCGGGTGGAGCCTGAGTaGCCCTGCTCCTCAAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: RRCSGSSVLRGRVHSPENRVEPE*PCSSRE Trigger: CTCCCTTGAGGAGCAGGGGCACTCAGGCTCCACCCG...GTTCTCTGGGGAATGAACCCTTCCTCGGAGGACACTGCTTCCAGAGCATCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153990.8 |
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| CDS-3UTR CCA 90 bp | GTGGAAAAGAAGCGGGGGATGTGCGGAAGGGCGGGCGAGCGGACACTAGCTGAGGACTCATCAACCGGTTaGCTTCAAAGTGGCATGAGT | + |
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Preference number: 4 (lower is better) Translates to: VEKKRGMCGRAGERTLAEDSSTG*LQSGMS Trigger: ACTCATGCCACTTTGAAGCCAACCGGTTGATGAGTC...CTCAGCTAGTGTCCGCTCGCCCGCCCTTCCGCACATCCCCCGCTTCTTTTCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153990.8 |
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| CDS-3UTR TCA 90 bp | AGAAGATGCTCTGGAAGCAGTGTCCTCCGAGGAAGGGTTCATTCCCCAGAGAACGGGCCGGGAAATGGCTaGCTCATCAACCAAGTACTG | + |
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Preference number: 4 (lower is better) Translates to: RRCSGSSVLRGRVHSPENGPGNG*LINQVL Trigger: CAGTACTTGGTTGATGAGTCAGCCATTTCCCGGCCC...GTTCTCTGGGGAATGAACCCTTCCTCGGAGGACACTGCTTCCAGAGCATCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027185.11 ENSMUST00000123301.8 |
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| CDS-3UTR TCA 90 bp | AGGCATGCTCTCTACTCTCCAGTGCCAACCCAGCATGCACACTGTGGTATGAACGGGCCGGGAAATGGCTaGCTCATCAACCAAGTACTG | + |
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Preference number: 4 (lower is better) Translates to: RHALYSPVPTQHAHCGMNGPGNG*LINQVL Trigger: CAGTACTTGGTTGATGAGTCAGCCATTTCCCGGCCC...GTTCATACCACAGTGTGCATGCTGGGTTGGCACTGGAGAGTAGAGAGCATGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114296.8 |
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| CDS-3UTR CCA 90 bp | CTGGAAGAGAAGATGCTCTGGAAGCAGTGTCCTCCGAGGAAGGGTTCATTCCCCTCAAAGTGGCATGAGTaGGCATCTTGGAACAGTACT | + |
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Preference number: 4 (lower is better) Translates to: LEEKMLWKQCPPRKGSFPSKWHE*ASWNST Trigger: AGTACTGTTCCAAGATGCCCACTCATGCCACTTTGA...GGGGAATGAACCCTTCCTCGGAGGACACTGCTTCCAGAGCATCTTCTCTTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153990.8 |
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| CDS-3UTR TCA 90 bp | ACACTGAGATCCAGAAAGTACCAGTCACAGCTTAAAAGGTGGAAAAGAAGCGGGGGGCCGGGAAATGGCTaGCTCATCAACCAAGTACTG | + |
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Preference number: 4 (lower is better) Translates to: TLRSRKYQSQLKRWKRSGGPGNG*LINQVL Trigger: CAGTACTTGGTTGATGAGTCAGCCATTTCCCGGCCC...CCCGCTTCTTTTCCACCTTTTAAGCTGTGACTGGTACTTTCTGGATCTCAGTGT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000027185.11 ENSMUST00000123301.8 |
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| CDS-3UTR TCA 90 bp | AGAGAAGATGCTCTGGAAGCAGTGTCCTCCGAGGAAGGGTTCATTCCCCAGAGAATTCTAGAGTCTGACTaGGGAAAAATACTGACATCC | + |
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Preference number: 4 (lower is better) Translates to: REDALEAVSSEEGFIPQRILESD*GKILTS Trigger: GGATGTCAGTATTTTTCCTCAGTCAGACTCTAGAAT...TCTCTGGGGAATGAACCCTTCCTCGGAGGACACTGCTTCCAGAGCATCTTCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027185.11 |
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| CDS-3UTR TCA 90 bp | AGAAGATGCTCTGGAAGCAGTGTCCTCCGAGGAAGGGTTCATTCCCCAGAGAACTCTCATTCTAGAGTCTaGCTGAGGAAAAATACTGAC | + |
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Preference number: 4 (lower is better) Translates to: RRCSGSSVLRGRVHSPENSHSRV*LRKNTD Trigger: GTCAGTATTTTTCCTCAGTCAGACTCTAGAATGAGA...GTTCTCTGGGGAATGAACCCTTCCTCGGAGGACACTGCTTCCAGAGCATCTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027185.11 |
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| CDS-3UTR CCA 90 bp | AAGATGCTCTGGAAGCAGTGTCCTCCGAGGAAGGGTTCATTCCCCAGAGAACAGGCTTTAAAACTCCTATaGATACAGCCATTTTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: KMLWKQCPPRKGSFPREQALKLL*IQPFWC Trigger: GCACCAAAATGGCTGTATCCATAGGAGTTTTAAAGC...CTGTTCTCTGGGGAATGAACCCTTCCTCGGAGGACACTGCTTCCAGAGCATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027185.11 |
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| CDS-3UTR GCA 90 bp | GAAGCAGTGTCCTCCGAGGAAGGGTTCATTCCCCAGAGAACAGTAAAATGTAGAAACAGTACTGAAGGCTaGAAGTGTGCACAGACTACA | + |
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Preference number: 4 (lower is better) Translates to: EAVSSEEGFIPQRTVKCRNSTEG*KCAQTT Trigger: TGTAGTCTGTGCACACTTGCAGCCTTCAGTACTGTT...TCTACATTTTACTGTTCTCTGGGGAATGAACCCTTCCTCGGAGGACACTGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153990.8 |
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| CDS-3UTR CCA 90 bp | GAAGCAGTGTCCTCCGAGGAAGGGTTCATTCCCCAGAGAACAGTAAAATGTAGACTAGAATTCCCACACTaGGTCTTTGTCATCAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: EAVSSEEGFIPQRTVKCRLEFPH*VFVIRK Trigger: TTTCCTGATGACAAAGACCCAGTGTGGGAATTCTAG...TCTACATTTTACTGTTCTCTGGGGAATGAACCCTTCCTCGGAGGACACTGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027185.11 |
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| CDS-3UTR CCA 90 bp | AAGGCATGCTCTCTACTCTCCAGTGCCAACCCAGCATGCACACTGTGGTATGAAATAAGCAAATACCTATaGATACAGCCATTTTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: KACSLLSSANPACTLWYEISKYL*IQPFWC Trigger: GCACCAAAATGGCTGTATCCATAGGTATTTGCTTAT...TTCATACCACAGTGTGCATGCTGGGTTGGCACTGGAGAGTAGAGAGCATGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114296.8 |
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| CDS-3UTR TCA 90 bp | CAAGGTTTACCCCACTACAGAAACAAGCATATAAAAGGCCAACATGCCATTTGTTTCTGTAATAGCATCTaGGTCCTATGCATGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: QGLPHYRNKHIKGQHAICFCNSI*VLCMSW Trigger: CCAGGACATGCATAGGACTCAGATGCTATTACAGAA...ACAAATGGCATGTTGGCCTTTTATATGCTTGTTTCTGTAGTGGGGTAAACCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027185.11 |
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| CDS-3UTR CCA 90 bp | AGAGAATTAACTAGCTCAAAAGTTACACTGAGATCCAGAAAGTACCAGTCACAGTTGTCATCAGGAAACTaGAATTCCAGCTCGCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: RELTSSKVTLRSRKYQSQLSSGN*NSSSLH Trigger: GTGGAGCGAGCTGGAATTCCAGTTTCCTGATGACAA...CTGTGACTGGTACTTTCTGGATCTCAGTGTAACTTTTGAGCTAGTTAATTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027185.11 |
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| CDS-3UTR TCA 90 bp | AGAGAATTAACTAGCTCAAAAGTTACACTGAGATCCAGAAAGTACCAGTCACAGACTGAGGAAAAATACTaGCATCCAGTGGGCTATACG | + |
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Preference number: 4 (lower is better) Translates to: RELTSSKVTLRSRKYQSQTEEKY*HPVGYT Trigger: CGTATAGCCCACTGGATGTCAGTATTTTTCCTCAGT...CTGTGACTGGTACTTTCTGGATCTCAGTGTAACTTTTGAGCTAGTTAATTCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027185.11 |
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| CDS-3UTR CCA 90 bp | AGAGAATTAACTAGCTCAAAAGTTACACTGAGATCCAGAAAGTACCAGTCACAGGAGTCTACTCCTGACTaGGAATTTCTCATTCTAGAG | + |
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Preference number: 4 (lower is better) Translates to: RELTSSKVTLRSRKYQSQESTPD*EFLILE Trigger: CTCTAGAATGAGAAATTCCCAGTCAGGAGTAGACTC...CTGTGACTGGTACTTTCTGGATCTCAGTGTAACTTTTGAGCTAGTTAATTCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027185.11 |
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| CDS GCA 90 bp | TGCAAGTGTGCACAGACTACAGGCCGGGTGGAGCCTGAGTGCCCCTaGTCCTCAAGGGAGAGGGGGAGGCAGCGTAGGGAGAACGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: CKCAQTTGRVEPECP*SSRERGRQRRENAS Trigger: GCTGGCGTTCTCCCTACGCTGCCTCCCCCTCTCCCTTGAGGAGCAGGGGCACTCAGGCTCCACCCGGCCTGTAGTCTGTGCACACTTGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153990.8 |
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| CDS GCA 90 bp | GAAGGCTGCAAGTGTGCACAGACTACAGGCCGGGTGGAGCCTGAGTaGCCCTGCTCCTCAAGGGAGAGGGGGAGGCAGCGTAGGGAGAAC | + |
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Preference number: 5 (lower is better) Translates to: EGCKCAQTTGRVEPE*PCSSRERGRQRREN Trigger: GTTCTCCCTACGCTGCCTCCCCCTCTCCCTTGAGGAGCAGGGGCACTCAGGCTCCACCCGGCCTGTAGTCTGTGCACACTTGCAGCCTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153990.8 |
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| CDS-3UTR CAA 90 bp | AAGCGGGGGATGTGCGGAAGGGCGGGCGAGCGGACACTAGCTGAGCTGGGCAGTTCTTCCTATCTCCACTaGCAGTTCATAGTGAGACAC | + |
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Preference number: 5 (lower is better) Translates to: KRGMCGRAGERTLAELGSSSYLH*QFIVRH Trigger: GTGTCTCACTATGAACTGCAAGTGGAGATAGGAAGA...ACTGCCCAGCTCAGCTAGTGTCCGCTCGCCCGCCCTTCCGCACATCCCCCGCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027185.11 ENSMUST00000123301.8 |
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| CDS-3UTR CAA 90 bp | CTGGAAGAGAAGATGCTCTGGAAGCAGTGTCCTCCGAGGAAGGGTTCATTCCCCTCTTCCTATCTCCACTaGCAGTTCATAGTGAGACAC | + |
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Preference number: 5 (lower is better) Translates to: LEEKMLWKQCPPRKGSFPSSYLH*QFIVRH Trigger: GTGTCTCACTATGAACTGCAAGTGGAGATAGGAAGA...GGGGAATGAACCCTTCCTCGGAGGACACTGCTTCCAGAGCATCTTCTCTTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027185.11 ENSMUST00000123301.8 |
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| CDS-3UTR CAA 90 bp | GAAGCAGTGTCCTCCGAGGAAGGGTTCATTCCCCAGAGAACAGTAAAATGTAGACAGGAGAGAACGTCTTaGTGGATGGCGTATGGAGCC | + |
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Preference number: 5 (lower is better) Translates to: EAVSSEEGFIPQRTVKCRQERTS*WMAYGA Trigger: GGCTCCATACGCCATCCACAAAGACGTTCTCTCCTG...TCTACATTTTACTGTTCTCTGGGGAATGAACCCTTCCTCGGAGGACACTGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027185.11 |
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| CDS-3UTR CAA 90 bp | CATGCTCTCTACTCTCCAGTGCCAACCCAGCATGCACACTGTGGTATGAACATTTCTTCCTATCTCCACTaGCAGTTCATAGTGAGACAC | + |
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Preference number: 5 (lower is better) Translates to: HALYSPVPTQHAHCGMNISSYLH*QFIVRH Trigger: GTGTCTCACTATGAACTGCAAGTGGAGATAGGAAGA...AATGTTCATACCACAGTGTGCATGCTGGGTTGGCACTGGAGAGTAGAGAGCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114296.8 |
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| CDS-3UTR CAA 90 bp | AGAGAATTAACTAGCTCAAAAGTTACACTGAGATCCAGAAAGTACCAGTCACAGTCCCACACTGGGTCTTaGTCATCAGGAAACTGGAAT | + |
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Preference number: 5 (lower is better) Translates to: RELTSSKVTLRSRKYQSQSHTGS*SSGNWN Trigger: ATTCCAGTTTCCTGATGACAAAGACCCAGTGTGGGA...CTGTGACTGGTACTTTCTGGATCTCAGTGTAACTTTTGAGCTAGTTAATTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027185.11 |
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| CDS TCA 72 bp | CTGCAAGTGTGCACAGACTACAGGCCGGGTGGAGCCTaGGTGCCCCTGCTCCTCAAGGGAGAGGGGGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: LQVCTDYRPGGA*VPLLLKGEGEA Trigger: TGCCTCCCCCTCTCCCTTGAGGAGCAGGGGCACTCAGGCTCCACCCGGCCTGTAGTCTGTGCACACTTGCAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153990.8 |
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| CDS GCA 72 bp | AAGTGTGCACAGACTACAGGCCGGGTGGAGCCTGAGTaGCCCTGCTCCTCAAGGGAGAGGGGGAGGCAGCGT | + |
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Preference number: 6 (lower is better) Translates to: KCAQTTGRVEPE*PCSSRERGRQR Trigger: ACGCTGCCTCCCCCTCTCCCTTGAGGAGCAGGGGCACTCAGGCTCCACCCGGCCTGTAGTCTGTGCACACTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153990.8 |
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