Pregenerated sensors for STRADA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069631Ensembl transcript IDs: ENSMUST00000007444.14, ENSMUST00000103072.10, ENSMUST00000106867.2, ENSMUST00000152008.2
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGCCCTTCAGGACATGGGAACAGAGGGAAGAGGGACTAGGCTACTaGGAGCAAGTGTTGGGAAGAGGATGTGAAGGTCCCTGGGTCAAG | + |
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Preference number: 1 (lower is better) Translates to: QPFRTWEQREEGLGY*EQVLGRGCEGPWVK Trigger: CTTGACCCAGGGACCTTCACATCCTCTTCCCAACACTTGCTCTCAGTAGCCTAGTCCCTCTTCCCTCTGTTCCCATGTCCTGAAGGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007444.14 |
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| 3UTR CCA 90 bp | GGTCATCCTTACACTGTGGGCATGCTCATCCTCTCTGTCACTCCGTaGGGGCACAGAGGCTCCTGGGGCTGCACATTTATTTACAAGGGT | + |
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Preference number: 1 (lower is better) Translates to: GHPYTVGMLILSVTP*GHRGSWGCTFIYKG Trigger: ACCCTTGTAAATAAATGTGCAGCCCCAGGAGCCTCTGTGCCCCCACGGAGTGACAGAGAGGATGAGCATGCCCACAGTGTAAGGATGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR TCA 90 bp | TCCTTTCAAGTAGCCAACAGCCAGCTTGGCAGGCAGAATATCCTTTaGACCCAGTCTGTGGCCAGAGGCAGATGCTGGTCCTCAAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: SFQVANSQLGRQNIL*TQSVARGRCWSSRR Trigger: CCTTCTTGAGGACCAGCATCTGCCTCTGGCCACAGACTGGGTTCAAAGGATATTCTGCCTGCCAAGCTGGCTGTTGGCTACTTGAAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
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| 3UTR GCA 90 bp | AGAGAGAGAGAGAGACTGACCAGAGCCCGCACCCTGCTAAAGCTTTaGACACTGACATGTGTTCCTGGCCTTTTACTTTCCAGTTTGACA | + |
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Preference number: 1 (lower is better) Translates to: RERERLTRARTLLKL*TLTCVPGLLLSSLT Trigger: TGTCAAACTGGAAAGTAAAAGGCCAGGAACACATGTCAGTGTGCAAAGCTTTAGCAGGGTGCGGGCTCTGGTCAGTCTCTCTCTCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR GCA 90 bp | CAGGGTCTCACTAAGTTGCCAGCGCTGGCCTTGAACTTGGAATGCTaGTGTTTCAGCCTCCCAAGTATACAGAATTACAGGTTTTTACCA | + |
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Preference number: 1 (lower is better) Translates to: QGLTKLPALALNLEC*CFSLPSIQNYRFLP Trigger: TGGTAAAAACCTGTAATTCTGTATACTTGGGAGGCTGAAACAGCAGCATTCCAAGTTCAAGGCCAGCGCTGGCAACTTAGTGAGACCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR CCA 90 bp | AGTAAGATGGATTCTTGGGAAAGGAGTGTAATAAATGAGCTAAGATaGTTTCAGGTGTCAGGGCCCACGAGAGGTGGAGATGAGGATGGC | + |
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Preference number: 1 (lower is better) Translates to: SKMDSWERSVINELR*FQVSGPTRGGDEDG Trigger: GCCATCCTCATCTCCACCTCTCGTGGGCCCTGACACCTGAAACCATCTTAGCTCATTTATTACACTCCTTTCCCAAGAATCCATCTTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007444.14 |
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| 3UTR TCA 90 bp | CTGCACTTGCTTTCTAACAATCCAGACAGGCCAAGAACAGCTGCTTaGTTCGTCTGCAGATTTCTGGGAAACACAGGACTAAAGAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: LHLLSNNPDRPRTAA*FVCRFLGNTGLKRK Trigger: CTTCCTCTTTAGTCCTGTGTTTCCCAGAAATCTGCAGACGAATCAAGCAGCTGTTCTTGGCCTGTCTGGATTGTTAGAAAGCAAGTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR GCA 90 bp | ATACTTATAAAAAGCAGAAGCGCACAGGCCTTTAACCACTGCACTTaGTTTCTAACAATCCAGACAGGCCAAGAACAGCTGCTTGATTCG | + |
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Preference number: 1 (lower is better) Translates to: ILIKSRSAQAFNHCT*FLTIQTGQEQLLDS Trigger: CGAATCAAGCAGCTGTTCTTGGCCTGTCTGGATTGTTAGAAAGCAAGTGCAGTGGTTAAAGGCCTGTGCGCTTCTGCTTTTTATAAGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR CCA 90 bp | ACCATCCCAATAATAATGTTTTCTCTCCTAGACAGAAAAACTCTTTaGTTCCATCGTGTATATTCCATAGGTAGTCCTTACAAGTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: TIPIIMFSLLDRKTL*FHRVYSIGSPYKFW Trigger: CCAGAACTTGTAAGGACTACCTATGGAATATACACGATGGAACCAAAGAGTTTTTCTGTCTAGGAGAGAAAACATTATTATTGGGATGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGCATGCTCATCCTCTCTGTCACTCCGTGGGGGCACAGAGGCTCCTGGGGCTAGGCATTCTTTCCACTaGGTGGAGCTCAGGCTAAGT | + |
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Preference number: 2 (lower is better) Translates to: WACSSSLSLRGGTEAPGARHSFH*VELRLS Trigger: ACTTAGCCTGAGCTCCACTCAGTGGAAAGAATGCCT...AGCCCCAGGAGCCTCTGTGCCCCCACGGAGTGACAGAGAGGATGAGCATGCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR-3UTR CCA 90 bp | TTAAGCCCTCAGATGAGGCAAGACATGTATGGCCCTTGGAGGAGGCACCAAGGCGGCAATGCCTGCGGCTaGGCAGGGCCAGACAGCTTA | + |
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Preference number: 2 (lower is better) Translates to: LSPQMRQDMYGPWRRHQGGNACG*AGPDSL Trigger: TAAGCTGTCTGGCCCTGCCCAGCCGCAGGCATTGCC...GCCTTGGTGCCTCCTCCAAGGGCCATACATGTCTTGCCTCATCTGAGGGCTTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007444.14 |
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| 3UTR CAA 90 bp | GTCCTTTCAAGTAGCCAACAGCCAGCTTGGCAGGCAGAATATCCTTaGAACCCAGTCTGTGGCCAGAGGCAGATGCTGGTCCTCAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: VLSSSQQPAWQAEYP*NPVCGQRQMLVLKK Trigger: CTTCTTGAGGACCAGCATCTGCCTCTGGCCACAGACTGGGTTCAAAGGATATTCTGCCTGCCAAGCTGGCTGTTGGCTACTTGAAAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
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| 3UTR-3UTR GCA 90 bp | GCTTTGCACACTGACATGTGTTCCTGGCCTTTTACTTTCCAGTTTGACACAGGGCCAGCACCCTTTCCTTaGCCCTTCCCCACTCTGAAC | + |
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Preference number: 2 (lower is better) Translates to: ALHTDMCSWPFTFQFDTGPAPFP*PFPTLN Trigger: GTTCAGAGTGGGGAAGGGGCAAGGAAAGGGTGCTGG...CCCTGTGTCAAACTGGAAAGTAAAAGGCCAGGAACACATGTCAGTGTGCAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTCACACATGCAGCTCATGCACCTTGGACATCTTTGCAGCCCAGCACCCTTTTCCCCTTCCACTGTGTaGGTCCTGGGAACTGAACTC | + |
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Preference number: 2 (lower is better) Translates to: FSHMQLMHLGHLCSPAPFSPSTV*VLGTEL Trigger: GAGTTCAGTTCCCAGGACCCACACAGTGGAAGGGGA...AAAGGGTGCTGGGCTGCAAAGATGTCCAAGGTGCATGAGCTGCATGTGTGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCTGTCACTCCGTGGGGGCACAGAGGCTCCTGGGGCTGCACATTTATTTACATGCATGATGCATATGTaGGGATCAGAGGACATGGGA | + |
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Preference number: 2 (lower is better) Translates to: SLSLRGGTEAPGAAHLFTCMMHM*GSEDMG Trigger: TCCCATGTCCTCTGATCCCCACATATGCATCATGCA...TGTAAATAAATGTGCAGCCCCAGGAGCCTCTGTGCCCCCACGGAGTGACAGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR CAA 90 bp | GTTCCTGGCCTTTTACTTTCCAGTTTGACACAGGGTCTCACTAAGTaGCCAGCGCTGGCCTTGAACTTGGAATGCTGCTGTTTCAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: VPGLLLSSLTQGLTK*PALALNLECCCFSL Trigger: GAGGCTGAAACAGCAGCATTCCAAGTTCAAGGCCAGCGCTGGCAACTTAGTGAGACCCTGTGTCAAACTGGAAAGTAAAAGGCCAGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR-3UTR TCA 90 bp | TTGACACAGGGTCTCACTAAGTTGCCAGCGCTGGCCTTGAACTTGGAATGCTGCTTAAGCCCTCAACAATaGACTTTTCCGAGACCCACC | + |
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Preference number: 2 (lower is better) Translates to: LTQGLTKLPALALNLECCLSPQQ*TFPRPT Trigger: GGTGGGTCTCGGAAAAGTTCATTGTTGAGGGCTTAA...GCAGCATTCCAAGTTCAAGGCCAGCGCTGGCAACTTAGTGAGACCCTGTGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR-3UTR GCA 90 bp | CTGACATGTGTTCCTGGCCTTTTACTTTCCAGTTTGACACAGGGTCTCACTAAGCCAAGCACCTGGACTTaGGGGACCAGCTCACTAGTC | + |
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Preference number: 2 (lower is better) Translates to: LTCVPGLLLSSLTQGLTKPSTWT*GTSSLV Trigger: GACTAGTGAGCTGGTCCCGCAAGTCCAGGTGCTTGG...CTTAGTGAGACCCTGTGTCAAACTGGAAAGTAAAAGGCCAGGAACACATGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTTGCACACTGACATGTGTTCCTGGCCTTTTACTTTCCAGTTTGACACAGGGAGGGGTCAGCATATCTaGGTGCTAAGCCTTCACCTG | + |
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Preference number: 2 (lower is better) Translates to: ALHTDMCSWPFTFQFDTGRGQHI*VLSLHL Trigger: CAGGTGAAGGCTTAGCACGCAGATATGCTGACCCCT...CCCTGTGTCAAACTGGAAAGTAAAAGGCCAGGAACACATGTCAGTGTGCAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR CAA 90 bp | AGTTTGACACAGGGTCTCACTAAGTTGCCAGCGCTGGCCTTGAACTaGGAATGCTGCTGTTTCAGCCTCCCAAGTATACAGAATTACAGG | + |
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Preference number: 2 (lower is better) Translates to: SLTQGLTKLPALALN*ECCCFSLPSIQNYR Trigger: CCTGTAATTCTGTATACTTGGGAGGCTGAAACAGCAGCATTCCAAGTTCAAGGCCAGCGCTGGCAACTTAGTGAGACCCTGTGTCAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR CAA 90 bp | CTTTCCAGTTTGACACAGGGTCTCACTAAGTTGCCAGCGCTGGCCTaGAACTTGGAATGCTGCTGTTTCAGCCTCCCAAGTATACAGAAT | + |
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Preference number: 2 (lower is better) Translates to: LSSLTQGLTKLPALA*NLECCCFSLPSIQN Trigger: ATTCTGTATACTTGGGAGGCTGAAACAGCAGCATTCCAAGTTCAAGGCCAGCGCTGGCAACTTAGTGAGACCCTGTGTCAAACTGGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCTGTCACTCCGTGGGGGCACAGAGGCTCCTGGGGCTGCACATTTATTTACAAAAAACAGAAATCCCTaGGAAACAGGTGCAAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: SLSLRGGTEAPGAAHLFTKNRNP*ETGAKR Trigger: TCTCTTTGCACCTGTTTCTCAGGGATTTCTGTTTTT...TGTAAATAAATGTGCAGCCCCAGGAGCCTCTGTGCCCCCACGGAGTGACAGAGA 49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTGGGTCTCAAAAGCCACAAAAACAGTGAAGTCCCTTCTAGAATGTCCTTTCTTTGAACCCAGTCTGTaGCCAGAGGCAGATGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: PWVSKATKTVKSLLECPFFEPSL*PEADAG Trigger: ACCAGCATCTGCCTCTGGCCACAGACTGGGTTCAAA...GAAAGGACATTCTAGAAGGGACTTCACTGTTTTTGTGGCTTTTGAGACCCAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
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| 3UTR-3UTR GCA 90 bp | GGCACAGAGGCTCCTGGGGCTGCACATTTATTTACAAGGGTTTCTAACCCGAGAAATCATTGTACACCTTaGCAGCCCATTTCAGATGAG | + |
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Preference number: 2 (lower is better) Translates to: GTEAPGAAHLFTRVSNPRNHCTP*QPISDE Trigger: CTCATCTGAAATGGGCTGGCAAGGTGTACAATGATT...TCTCGGGTTAGAAACCCTTGTAAATAAATGTGCAGCCCCAGGAGCCTCTGTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR-3UTR GCA 90 bp | CTGACATGTGTTCCTGGCCTTTTACTTTCCAGTTTGACACAGGGTCTCACTAAGGCCTTGAACTTGGAATaGTGCTGTTTCAGCCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: LTCVPGLLLSSLTQGLTKALNLE*CCFSLP Trigger: TGGGAGGCTGAAACAGCAGCATTCCAAGTTCAAGGC...CTTAGTGAGACCCTGTGTCAAACTGGAAAGTAAAAGGCCAGGAACACATGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAGGCTCCTGGGGCTGCACATTTATTTACAAGGGTTTCTAACCCGAGACTTACCAGCCCATTTCAGATaGGTGTTAGGTTTCCATTAC | + |
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Preference number: 2 (lower is better) Translates to: QRLLGLHIYLQGFLTRDLPAHFR*VLGFHY Trigger: GTAATGGAAACCTAACACTCATCTGAAATGGGCTGG...TAAGTCTCGGGTTAGAAACCCTTGTAAATAAATGTGCAGCCCCAGGAGCCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTTAAAATTTTTACAGGAGAGAGTAGGAGCCAAGTTTCCACTACCACAAAGTGGGGATCAGAGGACATaGGAGCCAGGTCTCCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: FLKFLQERVGAKFPLPQSGDQRT*EPGLPF Trigger: GAAGGGGAGACCTGGCTCCCATGTCCTCTGATCCCC...ACTTTGTGGTAGTGGAAACTTGGCTCCTACTCTCTCCTGTAAAAATTTTAAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAGGCTCCTGGGGCTGCACATTTATTTACAAGGGTTTCTAACCCGAGACTTATCCCTGAGAAACAGGTaGAAAGAGATCTTTACCAAC | + |
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Preference number: 2 (lower is better) Translates to: QRLLGLHIYLQGFLTRDLSLRNR*KEIFTN Trigger: GTTGGTAAAGATCTCTTTGCACCTGTTTCTCAGGGA...TAAGTCTCGGGTTAGAAACCCTTGTAAATAAATGTGCAGCCCCAGGAGCCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR CCA 72 bp | GACCTGGTGCTCAGTAGCTGGGGCAATGCCTGCGGCTaGGCAGGGCCAGACAGCTTAGGACTTGTCCCCTTT | + |
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Preference number: 3 (lower is better) Translates to: DLVLSSWGNACG*AGPDSLGLVPF Trigger: AAAGGGGACAAGTCCTAAGCTGTCTGGCCCTGCCCAGCCGCAGGCATTGCCCCAGCTACTGAGCACCAGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007444.14 |
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| 3UTR TCA 72 bp | AGGTCCCTGGGTCAAGAGTTACTCTGGGCCTGGCCGTaGGCCTCGGGGCCCATGCAGCACTTCTTCCTTCTA | + |
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Preference number: 3 (lower is better) Translates to: RSLGQELLWAWP*ASGPMQHFFLL Trigger: TAGAAGGAAGAAGTGCTGCATGGGCCCCGAGGCTCACGGCCAGGCCCAGAGTAACTCTTGACCCAGGGACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007444.14 |
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| 3UTR TCA 72 bp | ATGGTTTCAGGTGTCAGGGCCCACGAGAGGTGGAGATaGGGATGGCCAGTCCCAGCCTTAACTGACCTGGTG | + |
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Preference number: 3 (lower is better) Translates to: MVSGVRAHERWR*GWPVPALTDLV Trigger: CACCAGGTCAGTTAAGGCTGGGACTGGCCATCCTCATCTCCACCTCTCGTGGGCCCTGACACCTGAAACCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007444.14 |
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| 3UTR TCA 72 bp | GTAGCCAACAGCCAGCTTGGCAGGCAGAATATCCTTTaGACCCAGTCTGTGGCCAGAGGCAGATGCTGGTCC | + |
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Preference number: 3 (lower is better) Translates to: VANSQLGRQNIL*TQSVARGRCWS Trigger: GGACCAGCATCTGCCTCTGGCCACAGACTGGGTTCAAAGGATATTCTGCCTGCCAAGCTGGCTGTTGGCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
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| 3UTR CCA 72 bp | AGCTTGGCAGGCAGAATATCCTTTGAACCCAGTCTGTaGCCAGAGGCAGATGCTGGTCCTCAAGAAGGCCCC | + |
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Preference number: 3 (lower is better) Translates to: SLAGRISFEPSL*PEADAGPQEGP Trigger: GGGGCCTTCTTGAGGACCAGCATCTGCCTCTGGCCACAGACTGGGTTCAAAGGATATTCTGCCTGCCAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
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| 3UTR CCA 72 bp | TACACTGTGGGCATGCTCATCCTCTCTGTCACTCCGTaGGGGCACAGAGGCTCCTGGGGCTGCACATTTATT | + |
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Preference number: 3 (lower is better) Translates to: YTVGMLILSVTP*GHRGSWGCTFI Trigger: AATAAATGTGCAGCCCCAGGAGCCTCTGTGCCCCCACGGAGTGACAGAGAGGATGAGCATGCCCACAGTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR TCA 72 bp | ACCTGGGAAACCACCTGCATGGCATCTCCCGTCAGGTaGGTAGACGGTCTTTGTGTGTGTGTGTGTGTGCAC | + |
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Preference number: 3 (lower is better) Translates to: TWETTCMASPVR*VDGLCVCVCVH Trigger: GTGCACACACACACACACACAAAGACCGTCTACTCACCTGACGGGAGATGCCATGCAGGTGGTTTCCCAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR TCA 72 bp | ACTAGGCTACTGAGAGCAAGTGTTGGGAAGAGGATGTaGAGGTCCCTGGGTCAAGAGTTACTCTGGGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: TRLLRASVGKRM*RSLGQELLWAW Trigger: CCAGGCCCAGAGTAACTCTTGACCCAGGGACCTTCACATCCTCTTCCCAACACTTGCTCTCAGTAGCCTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007444.14 |
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| 3UTR TCA 72 bp | CAGGATGTCAGCTTTCCGGCCTCTCCAAGTCCCTGGTaGTTGGGATTCCCTGGGTCTCAAAAGCCACAAAAA | + |
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Preference number: 3 (lower is better) Translates to: QDVSFPASPSPW*LGFPGSQKPQK Trigger: TTTTTGTGGCTTTTGAGACCCAGGGAATCCCAATCACCAGGGACTTGGAGAGGCCGGAAAGCTGACATCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007444.14 |
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| 3UTR CCA 72 bp | TCCGGCCTCTCCAAGTCCCTGGTGATTGGGATTCCCTaGGTCTCAAAAGCCACAAAAACAGTGAAGTCCCTT | + |
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Preference number: 3 (lower is better) Translates to: SGLSKSLVIGIP*VSKATKTVKSL Trigger: AAGGGACTTCACTGTTTTTGTGGCTTTTGAGACCCAGGGAATCCCAATCACCAGGGACTTGGAGAGGCCGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007444.14 |
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| 3UTR-3UTR CAA 90 bp | GCTTTGCACACTGACATGTGTTCCTGGCCTTTTACTTTCCAGTTTGACACAGGGCTCAGGACTCCAGGGTaGATAGCAAGCCTCTGTACC | + |
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Preference number: 3 (lower is better) Translates to: ALHTDMCSWPFTFQFDTGLRTPG*IASLCT Trigger: GGTACAGAGGCTTGCTATCAACCCTGGAGTCCTGAG...CCCTGTGTCAAACTGGAAAGTAAAAGGCCAGGAACACATGTCAGTGTGCAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR GCA 72 bp | AAAAGCAGAAGCGCACAGGCCTTTAACCACTGCACTTaGTTTCTAACAATCCAGACAGGCCAAGAACAGCTG | + |
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Preference number: 3 (lower is better) Translates to: KSRSAQAFNHCT*FLTIQTGQEQL Trigger: CAGCTGTTCTTGGCCTGTCTGGATTGTTAGAAAGCAAGTGCAGTGGTTAAAGGCCTGTGCGCTTCTGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR GCA 72 bp | ACTAAGTTGCCAGCGCTGGCCTTGAACTTGGAATGCTaGTGTTTCAGCCTCCCAAGTATACAGAATTACAGG | + |
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Preference number: 3 (lower is better) Translates to: TKLPALALNLEC*CFSLPSIQNYR Trigger: CCTGTAATTCTGTATACTTGGGAGGCTGAAACAGCAGCATTCCAAGTTCAAGGCCAGCGCTGGCAACTTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR GCA 72 bp | CTCACTAAGTTGCCAGCGCTGGCCTTGAACTTGGAATaGTGCTGTTTCAGCCTCCCAAGTATACAGAATTAC | + |
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Preference number: 3 (lower is better) Translates to: LTKLPALALNLE*CCFSLPSIQNY Trigger: GTAATTCTGTATACTTGGGAGGCTGAAACAGCAGCATTCCAAGTTCAAGGCCAGCGCTGGCAACTTAGTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR CCA 72 bp | GATTCTTGGGAAAGGAGTGTAATAAATGAGCTAAGATaGTTTCAGGTGTCAGGGCCCACGAGAGGTGGAGAT | + |
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Preference number: 3 (lower is better) Translates to: DSWERSVINELR*FQVSGPTRGGD Trigger: ATCTCCACCTCTCGTGGGCCCTGACACCTGAAACCATCTTAGCTCATTTATTACACTCCTTTCCCAAGAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007444.14 |
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| 3UTR TCA 72 bp | GCACAATCATTGTACACCTTGCCAGCCCATTTCAGATaGGTGTTAGGTTTCCATTACACTAATCAGGGGTCC | + |
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Preference number: 3 (lower is better) Translates to: AQSLYTLPAHFR*VLGFHYTNQGS Trigger: GGACCCCTGATTAGTGTAATGGAAACCTAACACTCATCTGAAATGGGCTGGCAAGGTGTACAATGATTGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR TCA 72 bp | CTTTCTAACAATCCAGACAGGCCAAGAACAGCTGCTTaGTTCGTCTGCAGATTTCTGGGAAACACAGGACTA | + |
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Preference number: 3 (lower is better) Translates to: LSNNPDRPRTAA*FVCRFLGNTGL Trigger: TAGTCCTGTGTTTCCCAGAAATCTGCAGACGAATCAAGCAGCTGTTCTTGGCCTGTCTGGATTGTTAGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR-3UTR CAA 90 bp | CTGACATGTGTTCCTGGCCTTTTACTTTCCAGTTTGACACAGGGTCTCACTAAGAGACAGAAAAACTCTTaGGTTCCATCGTGTATATTC | + |
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Preference number: 3 (lower is better) Translates to: LTCVPGLLLSSLTQGLTKRQKNS*VPSCIF Trigger: GAATATACACGATGGAACCAAAGAGTTTTTCTGTCT...CTTAGTGAGACCCTGTGTCAAACTGGAAAGTAAAAGGCCAGGAACACATGTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR TCA 72 bp | CTACAGTATGACAGTGACTTTAAAAACAGAAATCCCTaGGAAACAGGTGCAAAGAGATCTTTACCAACTATG | + |
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Preference number: 3 (lower is better) Translates to: LQYDSDFKNRNP*ETGAKRSLPTM Trigger: CATAGTTGGTAAAGATCTCTTTGCACCTGTTTCTCAGGGATTTCTGTTTTTAAAGTCACTGTCATACTGTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
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| 3UTR CCA 72 bp | ATAATAATGTTTTCTCTCCTAGACAGAAAAACTCTTTaGTTCCATCGTGTATATTCCATAGGTAGTCCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: IIMFSLLDRKTL*FHRVYSIGSPY Trigger: GTAAGGACTACCTATGGAATATACACGATGGAACCAAAGAGTTTTTCTGTCTAGGAGAGAAAACATTATTAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGTCCTCAAGAAGGCCCCAGGCTCATACCCCACGCCAGCCAGCTGGAGGACCTGCTGGAGGACTTCTaGGCTGAGCCAAGGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AGPQEGPRLIPHASQLEDLLEDF*AEPRQD Trigger: GTCCTGCCTTGGCTCAGCCCAGAAGTCCTCCAGCAG...GTCCTCCAGCTGGCTGGCGTGGGGTATGAGCCTGGGGCCTTCTTGAGGACCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR GCA 90 bp | GGCTGGGCAGGGCCAGACAGCTTAGGACTTGTCCCCTTTCAGCCCTTCAGGACACCTCGGCAGGGATGGTaGTGGTGTCCAGCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GWAGPDSLGLVPFQPFRTPRQGW*WCPAGR Trigger: CCTGCCTGCTGGACACCAGCACCATCCCTGCCGAGG...TGTCCTGAAGGGCTGAAAGGGGACAAGTCCTAAGCTGTCTGGCCCTGCCCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007444.14 |
||
| CDS-3UTR TCA 90 bp | AGGCAGATGCTGGTCCTCAAGAAGGCCCCAGGCTCATACCCCACGCCAGCCAGCGCCGTACGCCATAAATaGTGTGACGACCCACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RQMLVLKKAPGSYPTPASAVRHK*CDDPQL Trigger: GAGCTGTGGGTCGTCACATCATTTATGGCGTACGGC...GCTGGCTGGCGTGGGGTATGAGCCTGGGGCCTTCTTGAGGACCAGCATCTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CCA 90 bp | AGGCAGATGCTGGTCCTCAAGAAGGCCCCAGGCTCATACCCCACGCCAGCCAGCTATTTGGGGAAATCGTaGACTGCACGCTGCCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RQMLVLKKAPGSYPTPASYLGKS*TARCRC Trigger: GCAGCGGCAGCGTGCAGTCCACGATTTCCCCAAATA...GCTGGCTGGCGTGGGGTATGAGCCTGGGGCCTTCTTGAGGACCAGCATCTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR TCA 90 bp | GCTGGTCCTCAAGAAGGCCCCAGGCTCATACCCCACGCCAGCCAGCTGGAGGACGCTCATTATCTGCGATaGAGGTGGCTCGATACGGTA | + |
|
Preference number: 4 (lower is better) Translates to: AGPQEGPRLIPHASQLEDAHYLR*RWLDTV Trigger: TACCGTATCGAGCCACCTTCATCGCAGATAATGAGC...GTCCTCCAGCTGGCTGGCGTGGGGTATGAGCCTGGGGCCTTCTTGAGGACCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR TCA 90 bp | TGGTTTCAGGTGTCAGGGCCCACGAGAGGTGGAGATGAGGATGGCCAGTCCCAGCGCTGCCGCTGCCCGTaGCTAATCATGCTAAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WFQVSGPTRGGDEDGQSQRCRCP*LIMLRL Trigger: CAACCTTAGCATGATTAGTCACGGGCAGCGGCAGCG...CTGGGACTGGCCATCCTCATCTCCACCTCTCGTGGGCCCTGACACCTGAAACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007444.14 |
||
| CDS-3UTR GCA 90 bp | AGGCAGATGCTGGTCCTCAAGAAGGCCCCAGGCTCATACCCCACGCCAGCCAGCGTGTCACCCGGAGGCTaGTCTCCAAACAGTTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RQMLVLKKAPGSYPTPASVSPGG*SPNSSK Trigger: TTTGGAACTGTTTGGAGAGCAGCCTCCGGGTGACAC...GCTGGCTGGCGTGGGGTATGAGCCTGGGGCCTTCTTGAGGACCAGCATCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007444.14 |
||
| CDS-3UTR GCA 90 bp | GCTGGTCCTCAAGAAGGCCCCAGGCTCATACCCCACGCCAGCCAGCTGGAGGACCCCCTGCAGGATGTATaGAATCGCCAGTTCATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AGPQEGPRLIPHASQLEDPLQDV*NRQFIH Trigger: ATGAATGAACTGGCGATTGCATACATCCTGCAGGGG...GTCCTCCAGCTGGCTGGCGTGGGGTATGAGCCTGGGGCCTTCTTGAGGACCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR GCA 90 bp | AGCTTGGCAGGCAGAATATCCTTTGAACCCAGTCTGTGGCCAGAGGCAGATGCTCCTCGGCAGGGATGGTaGTGGTGTCCAGCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLAGRISFEPSLWPEADAPRQGW*WCPAGR Trigger: CCTGCCTGCTGGACACCAGCACCATCCCTGCCGAGG...AGCATCTGCCTCTGGCCACAGACTGGGTTCAAAGGATATTCTGCCTGCCAAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CCA 90 bp | TATCCTTTGAACCCAGTCTGTGGCCAGAGGCAGATGCTGGTCCTCAAGAAGGCCAGCGGGAGGGACTCATaGTCAGCTCCTCGGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YPLNPVCGQRQMLVLKKASGRDS*SAPRQG Trigger: TCCCTGCCGAGGAGCTGACCATGAGTCCCTCCCGCT...GGCCTTCTTGAGGACCAGCATCTGCCTCTGGCCACAGACTGGGTTCAAAGGATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CCA 90 bp | AGCTTGGCAGGCAGAATATCCTTTGAACCCAGTCTGTGGCCAGAGGCAGATGCTCTGCTGGAGGACTTCTaGGCTGAGCCAAGGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLAGRISFEPSLWPEADALLEDF*AEPRQD Trigger: GTCCTGCCTTGGCTCAGCCCAGAAGTCCTCCAGCAG...AGCATCTGCCTCTGGCCACAGACTGGGTTCAAAGGATATTCTGCCTGCCAAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR TCA 90 bp | TATCCTTTGAACCCAGTCTGTGGCCAGAGGCAGATGCTGGTCCTCAAGAAGGCCGCCGTACGCCATAAATaGTGTGACGACCCACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YPLNPVCGQRQMLVLKKAAVRHK*CDDPQL Trigger: GAGCTGTGGGTCGTCACATCATTTATGGCGTACGGC...GGCCTTCTTGAGGACCAGCATCTGCCTCTGGCCACAGACTGGGTTCAAAGGATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CCA 90 bp | TGCTGGTCCTCAAGAAGGCCCCAGGCTCATACCCCACGCCAGCCAGCTGGAGGACCGCCTAATGCGCTCTaGTTTACTTACAAGAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CWSSRRPQAHTPRQPAGGPPNAL*FTYKKR Trigger: TCTTTTCTTGTAAGTAAACCAGAGCGCATTAGGCGG...TCCTCCAGCTGGCTGGCGTGGGGTATGAGCCTGGGGCCTTCTTGAGGACCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000007444.14 |
||
| 3UTR CAA 72 bp | AGTAGCCAACAGCCAGCTTGGCAGGCAGAATATCCTTaGAACCCAGTCTGTGGCCAGAGGCAGATGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSQQPAWQAEYP*NPVCGQRQMLV Trigger: GACCAGCATCTGCCTCTGGCCACAGACTGGGTTCAAAGGATATTCTGCCTGCCAAGCTGGCTGTTGGCTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| 3UTR CAA 72 bp | TCCCCCTGGCATTTTCACACATGCAGCTCATGCACCTaGGACATCTTTGCAGCCCAGCACCCTTTCCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SPWHFHTCSSCT*DIFAAQHPFLA Trigger: GGCAAGGAAAGGGTGCTGGGCTGCAAAGATGTCCAAGGTGCATGAGCTGCATGTGTGAAAATGCCAGGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
||
| CDS-3UTR GCA 90 bp | CAACAGCCAGCTTGGCAGGCAGAATATCCTTTGAACCCAGTCTGTGGCCAGAGGGCACGCCGCTTGATCTaGTTGAAGAAGGAGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QQPAWQAEYPLNPVCGQRARRLI*LKKEWF Trigger: GAACCACTCCTTCTTCAAGCAGATCAAGCGGCGTGC...CCTCTGGCCACAGACTGGGTTCAAAGGATATTCTGCCTGCCAAGCTGGCTGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CCA 90 bp | AGGCAGATGCTGGTCCTCAAGAAGGCCCCAGGCTCATACCCCACGCCAGCCAGCTCATCATCTCTGGTTTaGAGAAAGATGCTATGGACT | + |
|
Preference number: 4 (lower is better) Translates to: RQMLVLKKAPGSYPTPASSSSLV*RKMLWT Trigger: AGTCCATAGCATCTTTCTCCAAACCAGAGATGATGA...GCTGGCTGGCGTGGGGTATGAGCCTGGGGCCTTCTTGAGGACCAGCATCTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR TCA 90 bp | TATCCTTTGAACCCAGTCTGTGGCCAGAGGCAGATGCTGGTCCTCAAGAAGGCCGCTCATTATCTGCGATaGAGGTGGCTCGATACGGTA | + |
|
Preference number: 4 (lower is better) Translates to: YPLNPVCGQRQMLVLKKAAHYLR*RWLDTV Trigger: TACCGTATCGAGCCACCTTCATCGCAGATAATGAGC...GGCCTTCTTGAGGACCAGCATCTGCCTCTGGCCACAGACTGGGTTCAAAGGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR GCA 90 bp | CACAAAAACAGTGAAGTCCCTTCTAGAATGTCCTTTCAAGTAGCCAACAGCCAGGGGGAAATCGTGGACTaGACGCTGCCGCTGCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: HKNSEVPSRMSFQVANSQGEIVD*TLPLPV Trigger: CACGGGCAGCGGCAGCGTGCAGTCCACGATTTCCCC...CTGGCTGTTGGCTACTTGAAAGGACATTCTAGAAGGGACTTCACTGTTTTTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR GCA 90 bp | TCAAGTAGCCAACAGCCAGCTTGGCAGGCAGAATATCCTTTGAACCCAGTCTGTGCCTTGCGTCAGGGTTaGGCTGAAGGCACTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSSQQPAWQAEYPLNPVCALRQG*AEGTVP Trigger: TGGAACAGTGCCTTCAGCGCAACCCTGACGCAAGGC...ACAGACTGGGTTCAAAGGATATTCTGCCTGCCAAGCTGGCTGTTGGCTACTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR GCA 90 bp | GACATGGGAACAGAGGGAAGAGGGACTAGGCTACTGAGAGCAAGTGTTGGGAAGGCACGCCGCTTGATCTaGTTGAAGAAGGAGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DMGTEGRGTRLLRASVGKARRLI*LKKEWF Trigger: GAACCACTCCTTCTTCAAGCAGATCAAGCGGCGTGC...CTTCCCAACACTTGCTCTCAGTAGCCTAGTCCCTCTTCCCTCTGTTCCCATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007444.14 |
||
| CDS-3UTR CCA 90 bp | TGGTTTCAGGTGTCAGGGCCCACGAGAGGTGGAGATGAGGATGGCCAGTCCCAGGCTGCTCATCATCTCTaGTTTGGAGAAAGATGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: WFQVSGPTRGGDEDGQSQAAHHL*FGERCY Trigger: ATAGCATCTTTCTCCAAACCAGAGATGATGAGCAGC...CTGGGACTGGCCATCCTCATCTCCACCTCTCGTGGGCCCTGACACCTGAAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007444.14 |
||
| CDS-3UTR CCA 90 bp | CCCTGGGTCTCAAAAGCCACAAAAACAGTGAAGTCCCTTCTAGAATGTCCTTTCAGCGGGAGGGACTCATaGTCAGCTCCTCGGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PWVSKATKTVKSLLECPFSGRDS*SAPRQG Trigger: TCCCTGCCGAGGAGCTGACCATGAGTCCCTCCCGCT...GAAAGGACATTCTAGAAGGGACTTCACTGTTTTTGTGGCTTTTGAGACCCAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| 3UTR CAA 72 bp | CAGGGTCTCACTAAGTTGCCAGCGCTGGCCTTGAACTaGGAATGCTGCTGTTTCAGCCTCCCAAGTATACAG | + |
|
Preference number: 4 (lower is better) Translates to: QGLTKLPALALN*ECCCFSLPSIQ Trigger: CTGTATACTTGGGAGGCTGAAACAGCAGCATTCCAAGTTCAAGGCCAGCGCTGGCAACTTAGTGAGACCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
||
| 3UTR CAA 72 bp | TTGACACAGGGTCTCACTAAGTTGCCAGCGCTGGCCTaGAACTTGGAATGCTGCTGTTTCAGCCTCCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LTQGLTKLPALA*NLECCCFSLPS Trigger: ACTTGGGAGGCTGAAACAGCAGCATTCCAAGTTCAAGGCCAGCGCTGGCAACTTAGTGAGACCCTGTGTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
||
| CDS-3UTR TCA 90 bp | GCAGGCAGAATATCCTTTGAACCCAGTCTGTGGCCAGAGGCAGATGCTGGTCCTTTAAGCCCTCAACAATaGACTTTTCCGAGACCCACC | + |
|
Preference number: 4 (lower is better) Translates to: AGRISFEPSLWPEADAGPLSPQQ*TFPRPT Trigger: GGTGGGTCTCGGAAAAGTTCATTGTTGAGGGCTTAA...AGGACCAGCATCTGCCTCTGGCCACAGACTGGGTTCAAAGGATATTCTGCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007444.14 |
||
| CDS-3UTR TCA 90 bp | TTCTTCCTTCTAAGGAGGTCCCCTGAGCTCACACAACAGGATGTCAGCTTTCCGTGGCAGGCATATCTTTaGAGGGGACATGGCCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: FFLLRRSPELTQQDVSFPWQAYL*RGHGHW Trigger: CCAATGGCCATGTCCCCTTCAAAGATATGCCTGCCA...CGGAAAGCTGACATCCTGTTGTGTGAGCTCAGGGGACCTCCTTAGAAGGAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007444.14 |
||
| CDS-3UTR GCA 90 bp | GATTCTTGGGAAAGGAGTGTAATAAATGAGCTAAGATGGTTTCAGGTGTCAGGGGGGGAAATCGTGGACTaGACGCTGCCGCTGCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: DSWERSVINELRWFQVSGGEIVD*TLPLPV Trigger: CACGGGCAGCGGCAGCGTGCAGTCCACGATTTCCCC...CCCTGACACCTGAAACCATCTTAGCTCATTTATTACACTCCTTTCCCAAGAATC 52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000007444.14 |
||
| CDS-3UTR GCA 90 bp | AGCTTGGCAGGCAGAATATCCTTTGAACCCAGTCTGTGGCCAGAGGCAGATGCTCCACAGCTCATTATCTaGGATGAAGGTGGCTCGATA | + |
|
Preference number: 4 (lower is better) Translates to: SLAGRISFEPSLWPEADAPQLII*DEGGSI Trigger: TATCGAGCCACCTTCATCGCAGATAATGAGCTGTGG...AGCATCTGCCTCTGGCCACAGACTGGGTTCAAAGGATATTCTGCCTGCCAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR GCA 90 bp | ATATCCTTTGAACCCAGTCTGTGGCCAGAGGCAGATGCTGGTCCTCAAGAAGGCCCCCTGCAGGATGTATaGAATCGCCAGTTCATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ISFEPSLWPEADAGPQEGPLQDV*NRQFIH Trigger: ATGAATGAACTGGCGATTGCATACATCCTGCAGGGG...GCCTTCTTGAGGACCAGCATCTGCCTCTGGCCACAGACTGGGTTCAAAGGATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR GCA 90 bp | CCCTGGGTCTCAAAAGCCACAAAAACAGTGAAGTCCCTTCTAGAATGTCCTTTCGCCTTGCGTCAGGGTTaGGCTGAAGGCACTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PWVSKATKTVKSLLECPFALRQG*AEGTVP Trigger: TGGAACAGTGCCTTCAGCGCAACCCTGACGCAAGGC...GAAAGGACATTCTAGAAGGGACTTCACTGTTTTTGTGGCTTTTGAGACCCAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CCA 90 bp | TCAAGTAGCCAACAGCCAGCTTGGCAGGCAGAATATCCTTTGAACCCAGTCTGTGTGGAGATCAGAATGTaGCTGGCCTTGACACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSQQPAWQAEYPLNPVCVEIRM*LALTLL Trigger: CAGGAGTGTCAAGGCCAGCCACATTCTGATCTCCAC...ACAGACTGGGTTCAAAGGATATTCTGCCTGCCAAGCTGGCTGTTGGCTACTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR TCA 90 bp | GCAGGCAGAATATCCTTTGAACCCAGTCTGTGGCCAGAGGCAGATGCTGGTCCTAACAAGCTTCTAGGTTaGTCCTTCGTACTGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: AGRISFEPSLWPEADAGPNKLLG*SFVLSH Trigger: ATGTGACAGTACGAAGGATCAACCTAGAAGCTTGTT...AGGACCAGCATCTGCCTCTGGCCACAGACTGGGTTCAAAGGATATTCTGCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR TCA 90 bp | CACAAAAACAGTGAAGTCCCTTCTAGAATGTCCTTTCAAGTAGCCAACAGCCAGCGCTGCCGCTGCCCGTaGCTAATCATGCTAAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HKNSEVPSRMSFQVANSQRCRCP*LIMLRL Trigger: CAACCTTAGCATGATTAGTCACGGGCAGCGGCAGCG...CTGGCTGTTGGCTACTTGAAAGGACATTCTAGAAGGGACTTCACTGTTTTTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CCA 90 bp | GCTTGGCAGGCAGAATATCCTTTGAACCCAGTCTGTGGCCAGAGGCAGATGCTGGCTGCTCATCATCTCTaGTTTGGAGAAAGATGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: AWQAEYPLNPVCGQRQMLAAHHL*FGERCY Trigger: ATAGCATCTTTCTCCAAACCAGAGATGATGAGCAGC...CAGCATCTGCCTCTGGCCACAGACTGGGTTCAAAGGATATTCTGCCTGCCAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CCA 90 bp | ATATCCTTTGAACCCAGTCTGTGGCCAGAGGCAGATGCTGGTCCTCAAGAAGGCTCTTTGAAGGGGACATaGCCATTGGCTAGTTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: ISFEPSLWPEADAGPQEGSLKGT*PLASSH Trigger: ATGTGAACTAGCCAATGGCCATGTCCCCTTCAAAGA...GCCTTCTTGAGGACCAGCATCTGCCTCTGGCCACAGACTGGGTTCAAAGGATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CCA 90 bp | TCCCTGGGTCTCAAAAGCCACAAAAACAGTGAAGTCCCTTCTAGAATGTCCTTTTATTTGGGGAAATCGTaGACTGCACGCTGCCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLGLKSHKNSEVPSRMSFYLGKS*TARCRC Trigger: GCAGCGGCAGCGTGCAGTCCACGATTTCCCCAAATA...AAAGGACATTCTAGAAGGGACTTCACTGTTTTTGTGGCTTTTGAGACCCAGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR TCA 90 bp | CACAAAAACAGTGAAGTCCCTTCTAGAATGTCCTTTCAAGTAGCCAACAGCCAGACAAAGTTGTGGAAGTaGGGCGAGAAGGTTCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HKNSEVPSRMSFQVANSQTKLWK*GEKVRW Trigger: CCACCGAACCTTCTCGCCTCACTTCCACAACTTTGT...CTGGCTGTTGGCTACTTGAAAGGACATTCTAGAAGGGACTTCACTGTTTTTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR GCA 90 bp | AGGAGTGTAATAAATGAGCTAAGATGGTTTCAGGTGTCAGGGCCCACGAGAGGTCCACAGCTCATTATCTaGGATGAAGGTGGCTCGATA | + |
|
Preference number: 4 (lower is better) Translates to: RSVINELRWFQVSGPTRGPQLII*DEGGSI Trigger: TATCGAGCCACCTTCATCGCAGATAATGAGCTGTGG...ACCTCTCGTGGGCCCTGACACCTGAAACCATCTTAGCTCATTTATTACACTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007444.14 |
||
| CDS-3UTR CCA 90 bp | TCCCTGGGTCTCAAAAGCCACAAAAACAGTGAAGTCCCTTCTAGAATGTCCTTTGTGGAGATCAGAATGTaGCTGGCCTTGACACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLGLKSHKNSEVPSRMSFVEIRM*LALTLL Trigger: CAGGAGTGTCAAGGCCAGCCACATTCTGATCTCCAC...AAAGGACATTCTAGAAGGGACTTCACTGTTTTTGTGGCTTTTGAGACCCAGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CCA 90 bp | TCAAGTAGCCAACAGCCAGCTTGGCAGGCAGAATATCCTTTGAACCCAGTCTGTTCTTTGAAGGGGACATaGCCATTGGCTAGTTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: SSSQQPAWQAEYPLNPVCSLKGT*PLASSH Trigger: ATGTGAACTAGCCAATGGCCATGTCCCCTTCAAAGA...ACAGACTGGGTTCAAAGGATATTCTGCCTGCCAAGCTGGCTGTTGGCTACTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CCA 90 bp | CCCCTTCCCCACTCTGAACTCCTGCTGATTTCCTGTCTGAGATCTGCTGGTCATTCCACCAGAGAACTCTaGGTGTCACATAAAACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLPHSELLLISCLRSAGHSTREL*VSHKTK Trigger: TTTTGTTTTATGTGACACCCAGAGTTCTCTGGTGGA...ATGACCAGCAGATCTCAGACAGGAAATCAGCAGGAGTTCAGAGTGGGGAAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
||
| CDS-3UTR TCA 90 bp | AGAATATCCTTTGAACCCAGTCTGTGGCCAGAGGCAGATGCTGGTCCTCAAGAAAACAAGCTTCTAGGTTaGTCCTTCGTACTGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: RISFEPSLWPEADAGPQENKLLG*SFVLSH Trigger: ATGTGACAGTACGAAGGATCAACCTAGAAGCTTGTT...TTCTTGAGGACCAGCATCTGCCTCTGGCCACAGACTGGGTTCAAAGGATATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR TCA 90 bp | CTGGGTCTCAAAAGCCACAAAAACAGTGAAGTCCCTTCTAGAATGTCCTTTCAATGGCAGGCATATCTTTaGAGGGGACATGGCCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGLKSHKNSEVPSRMSFQWQAYL*RGHGHW Trigger: CCAATGGCCATGTCCCCTTCAAAGATATGCCTGCCA...TTGAAAGGACATTCTAGAAGGGACTTCACTGTTTTTGTGGCTTTTGAGACCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR TCA 90 bp | TGGGTCTCAAAAGCCACAAAAACAGTGAAGTCCCTTCTAGAATGTCCTTTCAAGACAAAGTTGTGGAAGTaGGGCGAGAAGGTTCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WVSKATKTVKSLLECPFKTKLWK*GEKVRW Trigger: CCACCGAACCTTCTCGCCTCACTTCCACAACTTTGT...CTTGAAAGGACATTCTAGAAGGGACTTCACTGTTTTTGTGGCTTTTGAGACCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR TCA 90 bp | CTGGGTCTCAAAAGCCACAAAAACAGTGAAGTCCCTTCTAGAATGTCCTTTCAATTTTCTAGCAGCATCTaGGTGGCAGGCATATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGLKSHKNSEVPSRMSFQFSSSI*VAGISL Trigger: CAAAGATATGCCTGCCACTCAGATGCTGCTAGAAAA...TTGAAAGGACATTCTAGAAGGGACTTCACTGTTTTTGTGGCTTTTGAGACCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR TCA 90 bp | GGTCTCAAAAGCCACAAAAACAGTGAAGTCCCTTCTAGAATGTCCTTTCAAGTATTTTCTAGCAGCATCTaGGTGGCAGGCATATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLKSHKNSEVPSRMSFQVFSSSI*VAGISL Trigger: CAAAGATATGCCTGCCACTCAGATGCTGCTAGAAAA...TACTTGAAAGGACATTCTAGAAGGGACTTCACTGTTTTTGTGGCTTTTGAGACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CCA 90 bp | CACAAAAACAGTGAAGTCCCTTCTAGAATGTCCTTTCAAGTAGCCAACAGCCAGTCATCATCTCTGGTTTaGAGAAAGATGCTATGGACT | + |
|
Preference number: 4 (lower is better) Translates to: HKNSEVPSRMSFQVANSQSSSLV*RKMLWT Trigger: AGTCCATAGCATCTTTCTCCAAACCAGAGATGATGA...CTGGCTGTTGGCTACTTGAAAGGACATTCTAGAAGGGACTTCACTGTTTTTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CCA 90 bp | AGTTATCCTGAAATGATGTTAAGTGCCATACCGTACTTACCTCCAAACAGTTCCCACCCTAATGCGCTCTaGTTTACTTACAAGAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SYPEMMLSAIPYLPPNSSHPNAL*FTYKKR Trigger: TCTTTTCTTGTAAGTAAACCAGAGCGCATTAGGGTG...GGAACTGTTTGGAGGTAAGTACGGTATGGCACTTAACATCATTTCAGGATAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
||
| CDS CCA 90 bp | GGAGGCTACCAGCAGCCAGGCTGTCATTCAGGCCAGGGTTGGCGATaGAGCGGGAGGGACTCATGGTCAGCTCCTCGGCAGGGATGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GGYQQPGCHSGQGWR*SGRDSWSAPRQGWC Trigger: GCACCATCCCTGCCGAGGAGCTGACCATGAGTCCCTCCCGCTCCATCGCCAACCCTGGCCTGAATGACAGCCTGGCTGCTGGTAGCCTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS CCA 90 bp | AAGGCCGGAGGCTACCAGCAGCCAGGCTGTCATTCAGGCCAGGGTTaGCGATGGAGCGGGAGGGACTCATGGTCAGCTCCTCGGCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KAGGYQQPGCHSGQG*RWSGRDSWSAPRQG Trigger: TCCCTGCCGAGGAGCTGACCATGAGTCCCTCCCGCTCCATCGCCAACCCTGGCCTGAATGACAGCCTGGCTGCTGGTAGCCTCCGGCCTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS CCA 90 bp | GAGGCGAGAAGGTTCGGTGGTAGGGGTGGGAAGGCGAGTCGCCATTaGAAGGCCGGAGGCTACCAGCAGCCAGGCTGTCATTCAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EARRFGGRGGKASRH*KAGGYQQPGCHSGQ Trigger: CTGGCCTGAATGACAGCCTGGCTGCTGGTAGCCTCCGGCCTTCCAATGGCGACTCGCCTTCCCACCCCTACCACCGAACCTTCTCGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CAA 90 bp | GCTGGTCCTCAAGAAGGCCCCAGGCTCATACCCCACGCCAGCCAGCTGGAGGACTGGCTGCCCTCGAAGTaGGTGATGGGAGTGACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: AGPQEGPRLIPHASQLEDWLPSK*VMGVTG Trigger: CCCAGTCACTCCCATCACCAACTTCGAGGGCAGCCA...GTCCTCCAGCTGGCTGGCGTGGGGTATGAGCCTGGGGCCTTCTTGAGGACCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS CCA 90 bp | GTGATCCTGAGACTGGCTGCCCTCGAAGTTGGTGATGGGAGTGACTaGGCGGAGCAACTCAGGCAAAGCCTCGGAAGCACGCCGCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VILRLAALEVGDGSD*AEQLRQSLGSTPLD Trigger: ATCAAGCGGCGTGCTTCCGAGGCTTTGCCTGAGTTGCTCCGCCCAGTCACTCCCATCACCAACTTCGAGGGCAGCCAGTCTCAGGATCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CAA 90 bp | TGCTGGTCCTCAAGAAGGCCCCAGGCTCATACCCCACGCCAGCCAGCTGGAGGAAAGTCCTCAAACCCTTaGCCTATGATGGTGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CWSSRRPQAHTPRQPAGGKSSNP*PMMVSS Trigger: GCTGCTCACCATCATAGGCAAAGGGTTTGAGGACTT...TCCTCCAGCTGGCTGGCGTGGGGTATGAGCCTGGGGCCTTCTTGAGGACCAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CAA 90 bp | TATCCTTTGAACCCAGTCTGTGGCCAGAGGCAGATGCTGGTCCTCAAGAAGGCCGAAGGCGAGTCGCCATaGGAAGGCCGGAGGCTACCA | + |
|
Preference number: 5 (lower is better) Translates to: YPLNPVCGQRQMLVLKKAEGESP*EGRRLP Trigger: TGGTAGCCTCCGGCCTTCCAATGGCGACTCGCCTTC...GGCCTTCTTGAGGACCAGCATCTGCCTCTGGCCACAGACTGGGTTCAAAGGATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CAA 90 bp | GCTGGTCCTCAAGAAGGCCCCAGGCTCATACCCCACGCCAGCCAGCTGGAGGACAATGTCACCATCTCATaGGAACAAGCTTCTAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: AGPQEGPRLIPHASQLEDNVTIS*EQASRL Trigger: CAACCTAGAAGCTTGTTCCAATGAGATGGTGACATT...GTCCTCCAGCTGGCTGGCGTGGGGTATGAGCCTGGGGCCTTCTTGAGGACCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CAA 90 bp | AGGCAGATGCTGGTCCTCAAGAAGGCCCCAGGCTCATACCCCACGCCAGCCAGCAATGTCACCATCTCATaGGAACAAGCTTCTAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RQMLVLKKAPGSYPTPASNVTIS*EQASRL Trigger: CAACCTAGAAGCTTGTTCCAATGAGATGGTGACATT...GCTGGCTGGCGTGGGGTATGAGCCTGGGGCCTTCTTGAGGACCAGCATCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CAA 90 bp | TATCCTTTGAACCCAGTCTGTGGCCAGAGGCAGATGCTGGTCCTCAAGAAGGCCCGCCGCTTGATCTGCTaGAAGAAGGAGTGGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: YPLNPVCGQRQMLVLKKARRLIC*KKEWFS Trigger: GCTGAACCACTCCTTCTTCAAGCAGATCAAGCGGCG...GGCCTTCTTGAGGACCAGCATCTGCCTCTGGCCACAGACTGGGTTCAAAGGATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CAA 90 bp | AACAGTGAAGTCCCTTCTAGAATGTCCTTTCAAGTAGCCAACAGCCAGCTTGGCGAAGGCGAGTCGCCATaGGAAGGCCGGAGGCTACCA | + |
|
Preference number: 5 (lower is better) Translates to: NSEVPSRMSFQVANSQLGEGESP*EGRRLP Trigger: TGGTAGCCTCCGGCCTTCCAATGGCGACTCGCCTTC...GCCAAGCTGGCTGTTGGCTACTTGAAAGGACATTCTAGAAGGGACTTCACTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CAA 90 bp | GCTTGGCAGGCAGAATATCCTTTGAACCCAGTCTGTGGCCAGAGGCAGATGCTGAAGTCCTCAAACCCTTaGCCTATGATGGTGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AWQAEYPLNPVCGQRQMLKSSNP*PMMVSS Trigger: GCTGCTCACCATCATAGGCAAAGGGTTTGAGGACTT...CAGCATCTGCCTCTGGCCACAGACTGGGTTCAAAGGATATTCTGCCTGCCAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS TCA 90 bp | AAAGCTGCTCATCATCTCTGGTTTGGAGAAAGATGCTATGGACTCTaGGCTCGCCTCATTGGCTTTTCTCCGAGTGTCACCCGGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KAAHHLWFGERCYGL*ARLIGFSPSVTRRL Trigger: CAGCCTCCGGGTGACACTCGGAGAAAAGCCAATGAGGCGAGCTCAGAGTCCATAGCATCTTTCTCCAAACCAGAGATGATGAGCAGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007444.14 |
||
| CDS-3UTR CAA 90 bp | CTGGGCAGGGCCAGACAGCTTAGGACTTGTCCCCTTTCAGCCCTTCAGGACATGCGATACGGTACTATATaGGGATGGCTGAAGAGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LGRARQLRTCPLSALQDMRYGTI*GWLKSL Trigger: TAAACTCTTCAGCCATCCCAATATAGTACCGTATCG...CATGTCCTGAAGGGCTGAAAGGGGACAAGTCCTAAGCTGTCTGGCCCTGCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000007444.14 |
||
| CDS-3UTR CAA 90 bp | GTCCTTTCAAGTAGCCAACAGCCAGCTTGGCAGGCAGAATATCCTTTGAACCCACGCCGCTTGATCTGCTaGAAGAAGGAGTGGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VLSSSQQPAWQAEYPLNPRRLIC*KKEWFS Trigger: GCTGAACCACTCCTTCTTCAAGCAGATCAAGCGGCG...TGGGTTCAAAGGATATTCTGCCTGCCAAGCTGGCTGTTGGCTACTTGAAAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CAA 90 bp | CCCCTTCCCCACTCTGAACTCCTGCTGATTTCCTGTCTGAGATCTGCTGGTCATGCCACCTTTCCCGTTTaGTTTTCCACCAGAGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: PLPHSELLLISCLRSAGHATFPV*FSTREL Trigger: GAGTTCTCTGGTGGAAAACAAAACGGGAAAGGTGGC...ATGACCAGCAGATCTCAGACAGGAAATCAGCAGGAGTTCAGAGTGGGGAAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106867.2 |
||
| CDS TCA 90 bp | GAAGTGTGTGCCAATGAGATCCTTTGCAGAGCCGTACGCCATAAATaGTGTGACGACCCACAGCTCATTATCTGCGATGAAGGTGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: EVCANEILCRAVRHK*CDDPQLIICDEGGS Trigger: CGAGCCACCTTCATCGCAGATAATGAGCTGTGGGTCGTCACATCATTTATGGCGTACGGCTCTGCAAAGGATCTCATTGGCACACACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 ENSMUST00000152008.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCAGAATATCCTTTGAACCCAGTCTGTGGCCAGAGGCAGATGCTGGTCCTCCTCATCATCTCTGGTTaGGAGAAAGATGCTATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: QAEYPLNPVCGQRQMLVLLIISG*EKDAMD Trigger: GTCCATAGCATCTTTCTCCAAACCAGAGATGATGAG...GAGGACCAGCATCTGCCTCTGGCCACAGACTGGGTTCAAAGGATATTCTGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CAA 90 bp | AGGACTTGTCCCCTTTCAGCCCTTCAGGACATGGGAACAGAGGGAAGAGGGACTAGCCAAGGCAGGACCTaGATACTATATTTGGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RTCPLSALQDMGTEGRGTSQGRT*ILYLGK Trigger: TTTCCCCAAATATAGTATCAAGGTCCTGCCTTGGCT...AGTCCCTCTTCCCTCTGTTCCCATGTCCTGAAGGGCTGAAAGGGGACAAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000007444.14 |
||
| CDS-3UTR CAA 90 bp | AGCTTGGCAGGCAGAATATCCTTTGAACCCAGTCTGTGGCCAGAGGCAGATGCTTCACATACTCTCCCGTaGGTTTGTACCTGGCTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SLAGRISFEPSLWPEADASHTLP*VCTWLN Trigger: ATTTAGCCAGGTACAAACCAACGGGAGAGTATGTGA...AGCATCTGCCTCTGGCCACAGACTGGGTTCAAAGGATATTCTGCCTGCCAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CAA 90 bp | AGCTTGGCAGGCAGAATATCCTTTGAACCCAGTCTGTGGCCAGAGGCAGATGCTGAACAAGCTTCTAGGTaGATCCTTCGTACTGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: SLAGRISFEPSLWPEADAEQASR*ILRTVT Trigger: TGTGACAGTACGAAGGATCAACCTAGAAGCTTGTTC...AGCATCTGCCTCTGGCCACAGACTGGGTTCAAAGGATATTCTGCCTGCCAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CAA 90 bp | GCTTGGCAGGCAGAATATCCTTTGAACCCAGTCTGTGGCCAGAGGCAGATGCTGACCTTGATACTATATTaGGGGAAATCGTGGACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: AWQAEYPLNPVCGQRQMLTLILY*GKSWTA Trigger: TGCAGTCCACGATTTCCCCAAATATAGTATCAAGGT...CAGCATCTGCCTCTGGCCACAGACTGGGTTCAAAGGATATTCTGCCTGCCAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CAA 90 bp | CTGGGTCTCAAAAGCCACAAAAACAGTGAAGTCCCTTCTAGAATGTCCTTTCAATGGCTGCCCTCGAAGTaGGTGATGGGAGTGACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LGLKSHKNSEVPSRMSFQWLPSK*VMGVTG Trigger: CCCAGTCACTCCCATCACCAACTTCGAGGGCAGCCA...TTGAAAGGACATTCTAGAAGGGACTTCACTGTTTTTGTGGCTTTTGAGACCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS TCA 90 bp | CCCCCTGCAAGAATGTCACCATCTCATTGGAACAAGCTTCTAGGTTaGTCCTTCGTACTGTCACATACTCTCCCGTTGGTTTGTACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PPARMSPSHWNKLLG*SFVLSHTLPLVCTW Trigger: CCAGGTACAAACCAACGGGAGAGTATGTGACAGTACGAAGGATCAACCTAGAAGCTTGTTCCAATGAGATGGTGACATTCTTGCAGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 ENSMUST00000152008.2 |
||
| CDS-3UTR CAA 90 bp | CTTCAGGACATGGGAACAGAGGGAAGAGGGACTAGGCTACTGAGAGCAAGTGTTCTCATCATCTCTGGTTaGGAGAAAGATGCTATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LQDMGTEGRGTRLLRASVLIISG*EKDAMD Trigger: GTCCATAGCATCTTTCTCCAAACCAGAGATGATGAG...AACACTTGCTCTCAGTAGCCTAGTCCCTCTTCCCTCTGTTCCCATGTCCTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000007444.14 |
||
| CDS-3UTR CAA 90 bp | GTCCTTTCAAGTAGCCAACAGCCAGCTTGGCAGGCAGAATATCCTTTGAACCCACTAATCATGCTAAGGTaGCTGCGTAAACCAGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: VLSSSQQPAWQAEYPLNPLIMLR*LRKPDR Trigger: CCTGTCTGGTTTACGCAGCAACCTTAGCATGATTAG...TGGGTTCAAAGGATATTCTGCCTGCCAAGCTGGCTGTTGGCTACTTGAAAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS CCA 90 bp | AAACCCTTTGCCTATGATGGTGAGCAGCTCATAACACCCGCCCTCTaGAAGAAAGCTGCTCATCATCTCTGGTTTGGAGAAAGATGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: KPFAYDGEQLITPAL*KKAAHHLWFGERCY Trigger: ATAGCATCTTTCTCCAAACCAGAGATGATGAGCAGCTTTCTTCCAGAGGGCGGGTGTTATGAGCTGCTCACCATCATAGGCAAAGGGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 ENSMUST00000152008.2 |
||
| CDS-3UTR CAA 90 bp | AGAATATCCTTTGAACCCAGTCTGTGGCCAGAGGCAGATGCTGGTCCTCAAGAAGAACAAGCTTCTAGGTaGATCCTTCGTACTGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: RISFEPSLWPEADAGPQEEQASR*ILRTVT Trigger: TGTGACAGTACGAAGGATCAACCTAGAAGCTTGTTC...TTCTTGAGGACCAGCATCTGCCTCTGGCCACAGACTGGGTTCAAAGGATATTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CAA 90 bp | AACAGTGAAGTCCCTTCTAGAATGTCCTTTCAAGTAGCCAACAGCCAGCTTGGCCTAATCATGCTAAGGTaGCTGCGTAAACCAGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: NSEVPSRMSFQVANSQLGLIMLR*LRKPDR Trigger: CCTGTCTGGTTTACGCAGCAACCTTAGCATGATTAG...GCCAAGCTGGCTGTTGGCTACTTGAAAGGACATTCTAGAAGGGACTTCACTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CAA 90 bp | AGTGAAGTCCCTTCTAGAATGTCCTTTCAAGTAGCCAACAGCCAGCTTGGCAGGCGATACGGTACTATATaGGGATGGCTGAAGAGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SEVPSRMSFQVANSQLGRRYGTI*GWLKSL Trigger: TAAACTCTTCAGCCATCCCAATATAGTACCGTATCG...CCTGCCAAGCTGGCTGTTGGCTACTTGAAAGGACATTCTAGAAGGGACTTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CAA 90 bp | AACAGTGAAGTCCCTTCTAGAATGTCCTTTCAAGTAGCCAACAGCCAGCTTGGCAGCCAAGGCAGGACCTaGATACTATATTTGGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: NSEVPSRMSFQVANSQLGSQGRT*ILYLGK Trigger: TTTCCCCAAATATAGTATCAAGGTCCTGCCTTGGCT...GCCAAGCTGGCTGTTGGCTACTTGAAAGGACATTCTAGAAGGGACTTCACTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS-3UTR CAA 90 bp | TGGGTCTCAAAAGCCACAAAAACAGTGAAGTCCCTTCTAGAATGTCCTTTCAAGACCTTGATACTATATTaGGGGAAATCGTGGACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: WVSKATKTVKSLLECPFKTLILY*GKSWTA Trigger: TGCAGTCCACGATTTCCCCAAATATAGTATCAAGGT...CTTGAAAGGACATTCTAGAAGGGACTTCACTGTTTTTGTGGCTTTTGAGACCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS CAA 90 bp | GAAGGCCGGAGGCTACCAGCAGCCAGGCTGTCATTCAGGCCAGGGTaGGCGATGGAGCGGGAGGGACTCATGGTCAGCTCCTCGGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: EGRRLPAARLSFRPG*AMEREGLMVSSSAG Trigger: CCCTGCCGAGGAGCTGACCATGAGTCCCTCCCGCTCCATCGCCAACCCTGGCCTGAATGACAGCCTGGCTGCTGGTAGCCTCCGGCCTTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS CCA 72 bp | CAGCAGCCAGGCTGTCATTCAGGCCAGGGTTGGCGATaGAGCGGGAGGGACTCATGGTCAGCTCCTCGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QQPGCHSGQGWR*SGRDSWSAPRQ Trigger: CTGCCGAGGAGCTGACCATGAGTCCCTCCCGCTCCATCGCCAACCCTGGCCTGAATGACAGCCTGGCTGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS CCA 72 bp | GGCTACCAGCAGCCAGGCTGTCATTCAGGCCAGGGTTaGCGATGGAGCGGGAGGGACTCATGGTCAGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GYQQPGCHSGQG*RWSGRDSWSAP Trigger: AGGAGCTGACCATGAGTCCCTCCCGCTCCATCGCCAACCCTGGCCTGAATGACAGCCTGGCTGCTGGTAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS CCA 72 bp | AGGTTCGGTGGTAGGGGTGGGAAGGCGAGTCGCCATTaGAAGGCCGGAGGCTACCAGCAGCCAGGCTGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: RFGGRGGKASRH*KAGGYQQPGCH Trigger: ATGACAGCCTGGCTGCTGGTAGCCTCCGGCCTTCCAATGGCGACTCGCCTTCCCACCCCTACCACCGAACCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS CAA 72 bp | AGGCTACCAGCAGCCAGGCTGTCATTCAGGCCAGGGTaGGCGATGGAGCGGGAGGGACTCATGGTCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RLPAARLSFRPG*AMEREGLMVSS Trigger: GGAGCTGACCATGAGTCCCTCCCGCTCCATCGCCAACCCTGGCCTGAATGACAGCCTGGCTGCTGGTAGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS CCA 72 bp | AGACTGGCTGCCCTCGAAGTTGGTGATGGGAGTGACTaGGCGGAGCAACTCAGGCAAAGCCTCGGAAGCACG | + |
|
Preference number: 6 (lower is better) Translates to: RLAALEVGDGSD*AEQLRQSLGST Trigger: CGTGCTTCCGAGGCTTTGCCTGAGTTGCTCCGCCCAGTCACTCCCATCACCAACTTCGAGGGCAGCCAGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
||
| CDS CAA 72 bp | TCTGGGCTGAGCCAAGGCAGGACCTTGATACTATATTaGGGGAAATCGTGGACTGCACGCTGCCGCTGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: SGLSQGRTLILY*GKSWTARCRCP Trigger: CGGGCAGCGGCAGCGTGCAGTCCACGATTTCCCCAAATATAGTATCAAGGTCCTGCCTTGGCTCAGCCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
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| CDS GCA 72 bp | TCAGCAGGGTGCTGGCGTTTGGCCTTGCGTCAGGGTTaGGCTGAAGGCACTGTTCCACAAAGTTGTGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: SAGCWRLALRQG*AEGTVPQSCGS Trigger: ACTTCCACAACTTTGTGGAACAGTGCCTTCAGCGCAACCCTGACGCAAGGCCAAACGCCAGCACCCTGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
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| CDS TCA 72 bp | TTGGGGAAATCGTGGACTGCACGCTGCCGCTGCCCGTaGCTAATCATGCTAAGGTTGCTGCGTAAACCAGAC | + |
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Preference number: 6 (lower is better) Translates to: LGKSWTARCRCP*LIMLRLLRKPD Trigger: GTCTGGTTTACGCAGCAACCTTAGCATGATTAGTCACGGGCAGCGGCAGCGTGCAGTCCACGATTTCCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
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| CDS CAA 72 bp | TGCTGGAGGACTTCTGGGCTGAGCCAAGGCAGGACCTaGATACTATATTTGGGGAAATCGTGGACTGCACGC | + |
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Preference number: 6 (lower is better) Translates to: CWRTSGLSQGRT*ILYLGKSWTAR Trigger: GCGTGCAGTCCACGATTTCCCCAAATATAGTATCAAGGTCCTGCCTTGGCTCAGCCCAGAAGTCCTCCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
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| CDS CAA 72 bp | AGAACTCCCAGTCATCCACCTCCAGGTCTTCTAGGTTaGTCACCAGGCCGAAGATTCCACTGTGATCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: RTPSHPPPGLLG*SPGRRFHCDPE Trigger: CTCAGGATCACAGTGGAATCTTCGGCCTGGTGACAAACCTAGAAGACCTGGAGGTGGATGACTGGGAGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 |
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| CDS CCA 72 bp | GCCTATGATGGTGAGCAGCTCATAACACCCGCCCTCTaGAAGAAAGCTGCTCATCATCTCTGGTTTGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: AYDGEQLITPAL*KKAAHHLWFGE Trigger: TTCTCCAAACCAGAGATGATGAGCAGCTTTCTTCCAGAGGGCGGGTGTTATGAGCTGCTCACCATCATAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 ENSMUST00000152008.2 |
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| CDS TCA 72 bp | GCCAATGAGATCCTTTGCAGAGCCGTACGCCATAAATaGTGTGACGACCCACAGCTCATTATCTGCGATGAA | + |
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Preference number: 6 (lower is better) Translates to: ANEILCRAVRHK*CDDPQLIICDE Trigger: TTCATCGCAGATAATGAGCTGTGGGTCGTCACATCATTTATGGCGTACGGCTCTGCAAAGGATCTCATTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 ENSMUST00000152008.2 |
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| CDS CAA 90 bp | TCCCCCTGCAAGAATGTCACCATCTCATTGGAACAAGCTTCTAGGTaGATCCTTCGTACTGTCACATACTCTCCCGTTGGTTTGTACCTG | + |
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Preference number: 6 (lower is better) Translates to: SPCKNVTISLEQASR*ILRTVTYSPVGLYL Trigger: CAGGTACAAACCAACGGGAGAGTATGTGACAGTACGAAGGATCAACCTAGAAGCTTGTTCCAATGAGATGGTGACATTCTTGCAGGGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 ENSMUST00000152008.2 |
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| CDS CAA 90 bp | GCTTCTAGGTTGATCCTTCGTACTGTCACATACTCTCCCGTTGGTTaGTACCTGGCTAAATTCACTGTCATCAAGTCCTCAAACCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: ASRLILRTVTYSPVG*YLAKFTVIKSSNPL Trigger: CAAAGGGTTTGAGGACTTGATGACAGTGAATTTAGCCAGGTACAAACCAACGGGAGAGTATGTGACAGTACGAAGGATCAACCTAGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 ENSMUST00000152008.2 |
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| CDS TCA 72 bp | AGAATGTCACCATCTCATTGGAACAAGCTTCTAGGTTaGTCCTTCGTACTGTCACATACTCTCCCGTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: RMSPSHWNKLLG*SFVLSHTLPLV Trigger: AACCAACGGGAGAGTATGTGACAGTACGAAGGATCAACCTAGAAGCTTGTTCCAATGAGATGGTGACATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 ENSMUST00000152008.2 |
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| CDS CCA 72 bp | TTCGTACTGTCACATACTCTCCCGTTGGTTTGTACCTaGCTAAATTCACTGTCATCAAGTCCTCAAACCCTT | + |
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Preference number: 6 (lower is better) Translates to: FVLSHTLPLVCT*LNSLSSSPQTL Trigger: AAGGGTTTGAGGACTTGATGACAGTGAATTTAGCCAGGTACAAACCAACGGGAGAGTATGTGACAGTACGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 ENSMUST00000152008.2 |
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| CDS CAA 72 bp | AAGAATGTCACCATCTCATTGGAACAAGCTTCTAGGTaGATCCTTCGTACTGTCACATACTCTCCCGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: KNVTISLEQASR*ILRTVTYSPVG Trigger: ACCAACGGGAGAGTATGTGACAGTACGAAGGATCAACCTAGAAGCTTGTTCCAATGAGATGGTGACATTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007444.14 ENSMUST00000103072.10 ENSMUST00000152008.2 |
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