Pregenerated sensors for STRA8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029848Ensembl transcript IDs: ENSMUST00000031876.12, ENSMUST00000114997.3, ENSMUST00000114999.8, ENSMUST00000185102.2
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAACATCAAGAAGGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTaGAAGACAAGGCAGTATAACTCTAGCTACTGGTATTCAAACTTG | + |
|
Preference number: 1 (lower is better) Translates to: RTSRRLLEAAFLNES*KTRQYNSSYWYSNL Trigger: CAAGTTTGAATACCAGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCCTTCTTGATGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| 3UTR-3UTR CCA 90 bp | CATCAAGAAGGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCTATAACTCTAGCTACTaGTATTCAAACTTGAACCCG | + |
|
Preference number: 2 (lower is better) Translates to: HQEGFWKQPFSMSLERQGYNSSY*YSNLNP Trigger: CGGGTTCAAGTTTGAATACCAGTAGCTAGAGTTATA...GCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCCTTCTTGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| 3UTR TCA 72 bp | AGAAGGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTaGAAGACAAGGCAGTATAACTCTAGCTACTGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: RRLLEAAFLNES*KTRQYNSSYWY Trigger: ATACCAGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTGGTCGCCGCTGTCCTTCATaGTGCCCTCCACCCCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QPFSMSLERQGSITLATGRRCPS*CPPPRP Trigger: TGGCCGGGGTGGAGGGCAGCATGAAGGACAGCGGCG...ACCAGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTGGTGAGCAGCTCGCTCCCTaGCTGTCCACGCCGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QPFSMSLERQGSITLATGEQLAP*LSTPLS Trigger: GGACAGCGGCGTGGACAGCCAGGGAGCGAGCTGCTC...ACCAGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTGAGCAGCTCGCTCCCTaGCTGTCCACGCCGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GFWKQPFSMSLERQGSITEQLAP*LSTPLS Trigger: GGACAGCGGCGTGGACAGCCAGGGAGCGAGCTGCTC...AGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR GCA 90 bp | CATCAAGAAGGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCCCTGTGACAGGCGTCTaGGGACCACCCGAGGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: HQEGFWKQPFSMSLERQGPVTGV*GPPEAQ Trigger: TTGAGCCTCGGGTGGTCCGCAGACGCCTGTCACAGG...GCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCCTTCTTGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031876.12 ENSMUST00000114999.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTCGCCGCTGTCCTTCATaGTGCCCTCCACCCCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KQPFSMSLERQGSITLATRRCPS*CPPPRP Trigger: TGGCCGGGGTGGAGGGCAGCATGAAGGACAGCGGCG...AGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTAGAGCCCTACCAGGGTaGCTCGATGGCGGGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GFWKQPFSMSLERQGSITRALPG*LDGGPV Trigger: CACAGGCCCGCCATCGAGCCACCCTGGTAGGGCTCT...AGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031876.12 ENSMUST00000114999.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTGGTAGAGCCCTACCAGGGTaGCTCGATGGCGGGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QPFSMSLERQGSITLATGRALPG*LDGGPV Trigger: CACAGGCCCGCCATCGAGCCACCCTGGTAGGGCTCT...ACCAGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031876.12 ENSMUST00000114999.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTGAGCAGCTCGCTCCCTaGCTGTCCACGCCGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KQPFSMSLERQGSITLATEQLAP*LSTPLS Trigger: GGACAGCGGCGTGGACAGCCAGGGAGCGAGCTGCTC...AGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CCA 90 bp | GAACATCAAGAAGGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAACCAGGGTGGCTCGATaGCGGGCCTGTGACAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: EHQEGFWKQPFSMSLERQTRVAR*RACDRR Trigger: ACGCCTGTCACAGGCCCGCCATCGAGCCACCCTGGT...TTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCCTTCTTGATGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031876.12 ENSMUST00000114999.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTCCTGTGACAGGCGTCTaGGGACCACCCGAGGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KQPFSMSLERQGSITLATPVTGV*GPPEAQ Trigger: TTGAGCCTCGGGTGGTCCGCAGACGCCTGTCACAGG...AGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031876.12 ENSMUST00000114999.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTTCCTCAGAGAGAGTCTaGCACAGGTGGGAGATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GFWKQPFSMSLERQGSITSSERV*HRWEMA Trigger: CGCCATCTCCCACCTGTGGCAGACTCTCTCTGAGGA...AGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR TCA 90 bp | CATCAAGAAGGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCACCGTTCAAATTCCATaGGGTCCGGCAACAGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HQEGFWKQPFSMSLERQGTVQIP*GPATEW Trigger: CCACTCTGTTGCCGGACCTCATGGAATTTGAACGGT...GCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCCTTCTTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTTCCTCAGAGAGAGTCTaGCACAGGTGGGAGATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KQPFSMSLERQGSITLATSSERV*HRWEMA Trigger: CGCCATCTCCCACCTGTGGCAGACTCTCTCTGAGGA...AGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR GCA 90 bp | GAACATCAAGAAGGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAATCCTCAGAGAGAGTCTaGCACAGGTGGGAGATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: EHQEGFWKQPFSMSLERQSSERV*HRWEMA Trigger: CGCCATCTCCCACCTGTGGCAGACTCTCTCTGAGGA...TTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCCTTCTTGATGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTGGTCCGGCAACAGAGTaGAGGAGGAGTGGGAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KQPFSMSLERQGSITLATGPATE*RRSGRD Trigger: ATCTCTCCCACTCCTCCTCCACTCTGTTGCCGGACC...AGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTAGAGTCTGCCACAGGTaGGAGATGGCGGCAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: KQPFSMSLERQGSITLATRVCHR*EMAAET Trigger: TGTCTCTGCCGCCATCTCCCACCTGTGGCAGACTCT...AGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR TCA 90 bp | CATCAAGAAGGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCCAGTACCTGCCACTTTaGGGCTGTGATATCAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: HQEGFWKQPFSMSLERQGQYLPL*GCDIRL Trigger: CAGTCTGATATCACAGCCTCAAAGTGGCAGGTACTG...GCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCCTTCTTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031876.12 ENSMUST00000114999.8 |
||
| CDS-3UTR TCA 90 bp | GGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTACCGTTCAAATTCCATaGGGTCCGGCAACAGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GFWKQPFSMSLERQGSITTVQIP*GPATEW Trigger: CCACTCTGTTGCCGGACCTCATGGAATTTGAACGGT...AGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTGGTTGCTGTTCCCACACCTaGAGGAGTCTGGCCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QPFSMSLERQGSITLATGCCSHT*RSLAFF Trigger: GAAAAAGGCCAGACTCCTGCAGGTGTGGGAACAGCA...ACCAGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CCA 90 bp | CATCAAGAAGGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCCCTCCTCTAAGCTGTTaGGATTCCCATCTTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HQEGFWKQPFSMSLERQGPPLSC*DSHLAG Trigger: ACCTGCAAGATGGGAATCCCAACAGCTTAGAGGAGG...GCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCCTTCTTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031876.12 ENSMUST00000114999.8 |
||
| CDS-3UTR CCA 90 bp | CATCAAGAAGGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCTTCTTCTTCAGCATCTaGTCCAACAGCCTCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HQEGFWKQPFSMSLERQGFFFSI*SNSLRG Trigger: CCCTCTGAGGCTGTTGGACCAGATGCTGAAGAAGAA...GCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCCTTCTTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| 3UTR CAA 72 bp | ACAAGGCAGTATAACTCTAGCTACTGGTATTCAAACTaGAACCCGCCCCTCCCCCATTTAATCTCCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TRQYNSSYWYSN*NPPLPHLISSF Trigger: GAAGGAGGAGATTAAATGGGGGAGGGGCGGGTTCAAGTTTGAATACCAGTAGCTAGAGTTATACTGCCTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR TCA 90 bp | CATCAAGAAGGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCTGGCATATTCTTCCTTaGCCTCCTCTAAGCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HQEGFWKQPFSMSLERQGWHILP*PPLSCW Trigger: CCAACAGCTTAGAGGAGGTCAAGGAAGAATATGCCA...GCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCCTTCTTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031876.12 ENSMUST00000114999.8 |
||
| CDS-3UTR TCA 90 bp | CATCAAGAAGGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCCTCCTCTGGATTTTCTaGGTTGCAGGTGGCAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: HQEGFWKQPFSMSLERQGLLWIF*VAGGKH Trigger: ATGTTTGCCACCTGCAACTCAGAAAATCCAGAGGAG...GCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCCTTCTTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR GCA 90 bp | GAACATCAAGAAGGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAATGCTGTTCCCACACCTaGAGGAGTCTGGCCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EHQEGFWKQPFSMSLERQCCSHT*RSLAFF Trigger: GAAAAAGGCCAGACTCCTGCAGGTGTGGGAACAGCA...TTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCCTTCTTGATGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTGGTATTCAAGGTCCGGCAACAGAGTaGAGGAGGAGTGGGAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSMSLERQGSITLATGIQGPATE*RRSGRD Trigger: ATCTCTCCCACTCCTCCTCCACTCTGTTGCCGGACC...TTGAATACCAGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTGGTACACCTGCAGGAGTCTaGCCTTTTTCTCCTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QPFSMSLERQGSITLATGTPAGV*PFSPQR Trigger: TCTCTGAGGAGAAAAAGGCCAGACTCCTGCAGGTGT...ACCAGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTAAAAAGGATCTCTTCTaGGGTGGACTCCAGCGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GFWKQPFSMSLERQGSITKKDLF*GGLQRA Trigger: TGCTCGCTGGAGTCCACCCCAGAAGAGATCCTTTTT...AGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CCA 90 bp | CATCAAGAAGGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCATGTTAGACATATGCTaGGCCTCACTCTTGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HQEGFWKQPFSMSLERQGMLDIC*ASLLSR Trigger: CCTGGACAAGAGTGAGGCCCAGCATATGTCTAACAT...GCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCCTTCTTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTGGTTGCATCATCATCATCTaGGGGCTCTGGTTCCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QPFSMSLERQGSITLATGCIIII*GLWFLV Trigger: AACCAGGAACCAGAGCCCCCAGATGATGATGATGCA...ACCAGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTTGCATCATCATCATCTaGGGGCTCTGGTTCCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GFWKQPFSMSLERQGSITCIIII*GLWFLV Trigger: AACCAGGAACCAGAGCCCCCAGATGATGATGATGCA...AGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTGGTTGGCATATTCTTCCTTaGCCTCCTCTAAGCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QPFSMSLERQGSITLATGWHILP*PPLSCW Trigger: CCAACAGCTTAGAGGAGGTCAAGGAAGAATATGCCA...ACCAGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031876.12 ENSMUST00000114999.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTGGTCTCCTCTGGATTTTCTaGGTTGCAGGTGGCAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: QPFSMSLERQGSITLATGLLWIF*VAGGKH Trigger: ATGTTTGCCACCTGCAACTCAGAAAATCCAGAGGAG...ACCAGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTGGTGCACTTCAGCAACATTaGATCATCATCATCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QPFSMSLERQGSITLATGALQQH*IIIIWG Trigger: CCCCCAGATGATGATGATGCAATGTTGCTGAAGTGC...ACCAGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTTTCTTCTTCAGCATCTaGTCCAACAGCCTCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KQPFSMSLERQGSITLATFFFSI*SNSLRG Trigger: CCCTCTGAGGCTGTTGGACCAGATGCTGAAGAAGAA...AGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CCA 90 bp | GAACATCAAGAAGGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAACACCTGCAGGAGTCTaGCCTTTTTCTCCTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EHQEGFWKQPFSMSLERQTPAGV*PFSPQR Trigger: TCTCTGAGGAGAAAAAGGCCAGACTCCTGCAGGTGT...TTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCCTTCTTGATGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTACACCTGCAGGAGTCTaGCCTTTTTCTCCTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KQPFSMSLERQGSITLATTPAGV*PFSPQR Trigger: TCTCTGAGGAGAAAAAGGCCAGACTCCTGCAGGTGT...AGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CCA 90 bp | GAACATCAAGAAGGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAAAAAAGGATCTCTTCTaGGGTGGACTCCAGCGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EHQEGFWKQPFSMSLERQKKDLF*GGLQRA Trigger: TGCTCGCTGGAGTCCACCCCAGAAGAGATCCTTTTT...TTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCCTTCTTGATGTTC 44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTGGTATGTTAGACATATGCTaGGCCTCACTCTTGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QPFSMSLERQGSITLATGMLDIC*ASLLSR Trigger: CCTGGACAAGAGTGAGGCCCAGCATATGTCTAACAT...ACCAGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTTGCATCATCATCATCTaGGGGCTCTGGTTCCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KQPFSMSLERQGSITLATCIIII*GLWFLV Trigger: AACCAGGAACCAGAGCCCCCAGATGATGATGATGCA...AGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTGGTTCAGGGGGACTGTCCTaGAGAAAACTGTTTAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QPFSMSLERQGSITLATGSGGLS*RKLFRN Trigger: ATTCCTAAACAGTTTTCTTCAGGACAGTCCCCCTGA...ACCAGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR TCA 90 bp | AAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTCTCCTCTGGATTTTCTaGGTTGCAGGTGGCAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: KQPFSMSLERQGSITLATLLWIF*VAGGKH Trigger: ATGTTTGCCACCTGCAACTCAGAAAATCCAGAGGAG...AGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTTGTCCAGGAAACTTaGCACGTCAAAAGCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GFWKQPFSMSLERQGSITLVQET*HVKSIF Trigger: GAAGATGCTTTTGACGTGGCAAGTTTCCTGGACAAG...AGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTGGTCTTGTCCAGGAAACTTaGCACGTCAAAAGCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QPFSMSLERQGSITLATGLVQET*HVKSIF Trigger: GAAGATGCTTTTGACGTGGCAAGTTTCCTGGACAAG...ACCAGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTGCACTTCAGCAACATTaGATCATCATCATCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KQPFSMSLERQGSITLATALQQH*IIIIWG Trigger: CCCCCAGATGATGATGATGCAATGTTGCTGAAGTGC...AGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR GCA 90 bp | GAACATCAAGAAGGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGCACTTCAGCAACATTaGATCATCATCATCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EHQEGFWKQPFSMSLERQALQQH*IIIIWG Trigger: CCCCCAGATGATGATGATGCAATGTTGCTGAAGTGC...TTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCCTTCTTGATGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CCA 90 bp | GAACATCAAGAAGGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAATGTTAGACATATGCTaGGCCTCACTCTTGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EHQEGFWKQPFSMSLERQMLDIC*ASLLSR Trigger: CCTGGACAAGAGTGAGGCCCAGCATATGTCTAACAT...TTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCCTTCTTGATGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTTTGGGATTCCCATCTTaGAGGTTGAAGGATGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KQPFSMSLERQGSITLATLGFPS*RLKDAL Trigger: CAAAGCATCCTTCAACCTGCAAGATGGGAATCCCAA...AGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031876.12 ENSMUST00000114999.8 |
||
| CDS-3UTR GCA 90 bp | GAACATCAAGAAGGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAACTTGTCCAGGAAACTTaGCACGTCAAAAGCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EHQEGFWKQPFSMSLERQLVQET*HVKSIF Trigger: GAAGATGCTTTTGACGTGGCAAGTTTCCTGGACAAG...TTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCCTTCTTGATGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTGGTATTCAACCTCCTCTAAGCTGTTaGGATTCCCATCTTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FSMSLERQGSITLATGIQPPLSC*DSHLAG Trigger: ACCTGCAAGATGGGAATCCCAACAGCTTAGAGGAGG...TTGAATACCAGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031876.12 ENSMUST00000114999.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTAAGTGTCACTTCATGTaGAGAGATGATGCTGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GFWKQPFSMSLERQGSITKCHFM*RDDAVH Trigger: ATGAACAGCATCATCTCTGCACATGAAGTGACACTT...AGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTGGTATTCAATCAGGGGGACTGTCCTaGAGAAAACTGTTTAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FSMSLERQGSITLATGIQSGGLS*RKLFRN Trigger: ATTCCTAAACAGTTTTCTTCAGGACAGTCCCCCTGA...TTGAATACCAGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTGGTATTCAATTGGGATTCCCATCTTaGAGGTTGAAGGATGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSMSLERQGSITLATGIQLGFPS*RLKDAL Trigger: CAAAGCATCCTTCAACCTGCAAGATGGGAATCCCAA...TTGAATACCAGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031876.12 ENSMUST00000114999.8 |
||
| CDS GCA 90 bp | AGAGCCCTACCAGGGTGGCTCGATGGCGGGCCTGTGACAGGCGTCTaGGGACCACCCGAGGCTCAAGCTTCTGCAGCTGCGCCAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RALPGWLDGGPVTGV*GPPEAQASAAAPMA Trigger: AGCCATTGGCGCAGCTGCAGAAGCTTGAGCCTCGGGTGGTCCGCAGACGCCTGTCACAGGCCCGCCATCGAGCCACCCTGGTAGGGCTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031876.12 ENSMUST00000114999.8 |
||
| CDS GCA 90 bp | GTACCTGCCACAGGGTGGCTCGATGGCGGGCCTGTGACAGGCGTCTaGGGACCACCCGAGGCTCAAGCTTCTGCAGCTGCGCCAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VPATGWLDGGPVTGV*GPPEAQASAAAPMA Trigger: AGCCATTGGCGCAGCTGCAGAAGCTTGAGCCTCGGGTGGTCCGCAGACGCCTGTCACAGGCCCGCCATCGAGCCACCCTGTGGCAGGTAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185102.2 |
||
| CDS TCA 90 bp | TGTCCTATTCAGTACCTGCCACAGGGTGGCTCGATGGCGGGCCTGTaGCAGGCGTCTGCGGACCACCCGAGGCTCAAGCTTCTGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CPIQYLPQGGSMAGL*QASADHPRLKLLQL Trigger: CAGCTGCAGAAGCTTGAGCCTCGGGTGGTCCGCAGACGCCTGTCACAGGCCCGCCATCGAGCCACCCTGTGGCAGGTACTGAATAGGACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185102.2 |
||
| CDS CCA 90 bp | ACTGCCTTCCTTAGGTTGTTGAAGAGCCCTACCAGGGTGGCTCGATaGCGGGCCTGTGACAGGCGTCTGCGGACCACCCGAGGCTCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: TAFLRLLKSPTRVAR*RACDRRLRTTRGSS Trigger: GCTTGAGCCTCGGGTGGTCCGCAGACGCCTGTCACAGGCCCGCCATCGAGCCACCCTGGTAGGGCTCTTCAACAACCTAAGGAAGGCAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031876.12 ENSMUST00000114999.8 |
||
| CDS CCA 90 bp | GGTCTGCGAAGGCGCTGTGCTGCTGTTCCCACACCTGCAGGAGTCTaGCCTTTTTCTCCTCAGAGAGAGTCTGCCACAGGTGGGAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: GLRRRCAAVPTPAGV*PFSPQRESATGGRW Trigger: CCATCTCCCACCTGTGGCAGACTCTCTCTGAGGAGAAAAAGGCCAGACTCCTGCAGGTGTGGGAACAGCAGCACAGCGCCTTCGCAGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS CCA 90 bp | GTTCCTGAATATGAATCTTTGTCCTATTCAGTACCTGCCACAGGGTaGCTCGATGGCGGGCCTGTGACAGGCGTCTGCGGACCACCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: VPEYESLSYSVPATG*LDGGPVTGVCGPPE Trigger: CTCGGGTGGTCCGCAGACGCCTGTCACAGGCCCGCCATCGAGCCACCCTGTGGCAGGTACTGAATAGGACAAAGATTCATATTCAGGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185102.2 |
||
| CDS GCA 90 bp | TCCCACACCTGCAGGAGTCTGGCCTTTTTCTCCTCAGAGAGAGTCTaGCACAGGTGGGAGATGGCGGCAGAGACAATAGGAAGTGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: SHTCRSLAFFSSERV*HRWEMAAETIGSVT Trigger: AGTGACACTTCCTATTGTCTCTGCCGCCATCTCCCACCTGTGGCAGACTCTCTCTGAGGAGAAAAAGGCCAGACTCCTGCAGGTGTGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS GCA 90 bp | CAGGTGGGAGATGGCGGCAGAGACAATAGGAAGTGTCACTTCATGTaGAGAGATGATGCTGTTCATGGTCAGGAGGTCCATGGTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QVGDGGRDNRKCHFM*RDDAVHGQEVHGLL Trigger: AAGCAGACCATGGACCTCCTGACCATGAACAGCATCATCTCTGCACATGAAGTGACACTTCCTATTGTCTCTGCCGCCATCTCCCACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS CCA 90 bp | TCTGAGTTGCAGGTGGCAAACATAGCGCTGATGTTAGACATATGCTaGGCCTCACTCTTGTCCAGGAAACTTGCCACGTCAAAAGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SELQVANIALMLDIC*ASLLSRKLATSKAS Trigger: AGATGCTTTTGACGTGGCAAGTTTCCTGGACAAGAGTGAGGCCCAGCATATGTCTAACATCAGCGCTATGTTTGCCACCTGCAACTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS GCA 90 bp | TTTTCTGAGTTGCAGGTGGCAAACATAGCGCTGATGTTAGACATATaGTGGGCCTCACTCTTGTCCAGGAAACTTGCCACGTCAAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FSELQVANIALMLDI*WASLLSRKLATSKA Trigger: TGCTTTTGACGTGGCAAGTTTCCTGGACAAGAGTGAGGCCCAGCATATGTCTAACATCAGCGCTATGTTTGCCACCTGCAACTCAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTGGTACTGCCTTCCTTAGGTaGTTGAAGAGCCCTACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QPFSMSLERQGSITLATGTAFLR*LKSPTR Trigger: CCTGGTAGGGCTCTTCAACAACCTAAGGAAGGCAGT...ACCAGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031876.12 ENSMUST00000114999.8 |
||
| CDS-3UTR CAA 90 bp | CATCAAGAAGGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCGGCACTTCAGCAACATaGCATCATCATCATCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HQEGFWKQPFSMSLERQGGTSAT*HHHHLG Trigger: CCCCAGATGATGATGATGCAATGTTGCTGAAGTGCC...GCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCCTTCTTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CAA 90 bp | GAACATCAAGAAGGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAACTGCCTTCCTTAGGTaGTTGAAGAGCCCTACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EHQEGFWKQPFSMSLERQTAFLR*LKSPTR Trigger: CCTGGTAGGGCTCTTCAACAACCTAAGGAAGGCAGT...TTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCCTTCTTGATGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031876.12 ENSMUST00000114999.8 |
||
| CDS-3UTR CAA 90 bp | GAACATCAAGAAGGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAACCTCCTCTAAGCTGTaGGGATTCCCATCTTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EHQEGFWKQPFSMSLERQTSSKL*GFPSCR Trigger: CCTGCAAGATGGGAATCCCAACAGCTTAGAGGAGGT...TTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCCTTCTTGATGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031876.12 ENSMUST00000114999.8 |
||
| CDS-3UTR CAA 90 bp | CATCAAGAAGGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCTCTGGATTTTCTGAGTaGCAGGTGGCAAACATAGCG | + |
|
Preference number: 5 (lower is better) Translates to: HQEGFWKQPFSMSLERQGSGFSE*QVANIA Trigger: CGCTATGTTTGCCACCTGCAACTCAGAAAATCCAGA...GCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCCTTCTTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CAA 90 bp | GGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTGTTGGGATTCCCATCTaGCAGGTTGAAGGATGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GFWKQPFSMSLERQGSITVGIPI*QVEGCF Trigger: AAAGCATCCTTCAACCTGCAAGATGGGAATCCCAAC...AGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031876.12 ENSMUST00000114999.8 |
||
| CDS-3UTR CAA 90 bp | CATCAAGAAGGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCTCTTGTCCAGGAAACTaGCCACGTCAAAAGCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: HQEGFWKQPFSMSLERQGSCPGN*PRQKHL Trigger: AAGATGCTTTTGACGTGGCAAGTTTCCTGGACAAGA...GCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCCTTCTTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTGGTTCTGGATTTTCTGAGTaGCAGGTGGCAAACATAGCG | + |
|
Preference number: 5 (lower is better) Translates to: QPFSMSLERQGSITLATGSGFSE*QVANIA Trigger: CGCTATGTTTGCCACCTGCAACTCAGAAAATCCAGA...ACCAGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CAA 90 bp | GAACATCAAGAAGGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCACTTCAGCAACATaGCATCATCATCATCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: EHQEGFWKQPFSMSLERQGTSAT*HHHHLG Trigger: CCCCAGATGATGATGATGCAATGTTGCTGAAGTGCC...TTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCCTTCTTGATGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTGGCACTTCAGCAACATaGCATCATCATCATCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: KQPFSMSLERQGSITLATGTSAT*HHHHLG Trigger: CCCCAGATGATGATGATGCAATGTTGCTGAAGTGCC...AGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CAA 90 bp | GAACATCAAGAAGGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGTTGGGATTCCCATCTaGCAGGTTGAAGGATGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: EHQEGFWKQPFSMSLERQVGIPI*QVEGCF Trigger: AAAGCATCCTTCAACCTGCAAGATGGGAATCCCAAC...TTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCCTTCTTGATGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031876.12 ENSMUST00000114999.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTTCTTGTCCAGGAAACTaGCCACGTCAAAAGCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: KQPFSMSLERQGSITLATSCPGN*PRQKHL Trigger: AAGATGCTTTTGACGTGGCAAGTTTCCTGGACAAGA...AGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTGGTATTCAATCTGGATTTTCTGAGTaGCAGGTGGCAAACATAGCG | + |
|
Preference number: 5 (lower is better) Translates to: FSMSLERQGSITLATGIQSGFSE*QVANIA Trigger: CGCTATGTTTGCCACCTGCAACTCAGAAAATCCAGA...TTGAATACCAGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CAA 90 bp | GGCTTTTGGAAGCAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTACACAGCCAAGGCTTTaGAAAAACTCAATGATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GFWKQPFSMSLERQGSITTQPRL*KNSMIC Trigger: ACAGATCATTGAGTTTTTCAAAAGCCTTGGCTGTGT...AGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTGCTTCCAAAAGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCTTTCTCAATGAGTCTTGAAAGACAAGGCAGTATAACTCTAGCTACTGGTACACAGCCAAGGCTTTaGAAAAACTCAATGATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QPFSMSLERQGSITLATGTQPRL*KNSMIC Trigger: ACAGATCATTGAGTTTTTCAAAAGCCTTGGCTGTGT...ACCAGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGGCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS GCA 72 bp | CCAGGGTGGCTCGATGGCGGGCCTGTGACAGGCGTCTaGGGACCACCCGAGGCTCAAGCTTCTGCAGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: PGWLDGGPVTGV*GPPEAQASAAA Trigger: CGCAGCTGCAGAAGCTTGAGCCTCGGGTGGTCCGCAGACGCCTGTCACAGGCCCGCCATCGAGCCACCCTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031876.12 ENSMUST00000114999.8 |
||
| CDS GCA 72 bp | ACAGGGTGGCTCGATGGCGGGCCTGTGACAGGCGTCTaGGGACCACCCGAGGCTCAAGCTTCTGCAGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: TGWLDGGPVTGV*GPPEAQASAAA Trigger: CGCAGCTGCAGAAGCTTGAGCCTCGGGTGGTCCGCAGACGCCTGTCACAGGCCCGCCATCGAGCCACCCTGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185102.2 |
||
| CDS TCA 72 bp | GAAGAGCCCTACCAGGGTGGCTCGATGGCGGGCCTGTaGCAGGCGTCTGCGGACCACCCGAGGCTCAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: EEPYQGGSMAGL*QASADHPRLKL Trigger: AAGCTTGAGCCTCGGGTGGTCCGCAGACGCCTGTCACAGGCCCGCCATCGAGCCACCCTGGTAGGGCTCTTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031876.12 ENSMUST00000114999.8 |
||
| CDS TCA 72 bp | CAGTACCTGCCACAGGGTGGCTCGATGGCGGGCCTGTaGCAGGCGTCTGCGGACCACCCGAGGCTCAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: QYLPQGGSMAGL*QASADHPRLKL Trigger: AAGCTTGAGCCTCGGGTGGTCCGCAGACGCCTGTCACAGGCCCGCCATCGAGCCACCCTGTGGCAGGTACTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185102.2 |
||
| CDS CCA 72 bp | GACCACCCGAGGCTCAAGCTTCTGCAGCTGCGCCAATaGCTGGGGTGCCCCATCATCACTGGGTTGGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: DHPRLKLLQLRQ*LGCPIITGLVA Trigger: GGCAACCAACCCAGTGATGATGGGGCACCCCAGCCATTGGCGCAGCTGCAGAAGCTTGAGCCTCGGGTGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114999.8 ENSMUST00000185102.2 |
||
| CDS CCA 72 bp | CTTAGGTTGTTGAAGAGCCCTACCAGGGTGGCTCGATaGCGGGCCTGTGACAGGCGTCTGCGGACCACCCGA | + |
|
Preference number: 6 (lower is better) Translates to: LRLLKSPTRVAR*RACDRRLRTTR Trigger: TCGGGTGGTCCGCAGACGCCTGTCACAGGCCCGCCATCGAGCCACCCTGGTAGGGCTCTTCAACAACCTAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031876.12 ENSMUST00000114999.8 |
||
| CDS CCA 72 bp | TTTGTCCTATTCAGTACCTGCCACAGGGTGGCTCGATaGCGGGCCTGTGACAGGCGTCTGCGGACCACCCGA | + |
|
Preference number: 6 (lower is better) Translates to: FVLFSTCHRVAR*RACDRRLRTTR Trigger: TCGGGTGGTCCGCAGACGCCTGTCACAGGCCCGCCATCGAGCCACCCTGTGGCAGGTACTGAATAGGACAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185102.2 |
||
| CDS GCA 72 bp | AGACAGGCCTCGGTGAGGTCTGCGAAGGCGCTGTGCTaGTGTTCCCACACCTGCAGGAGTCTGGCCTTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: RQASVRSAKALC*CSHTCRSLAFF Trigger: GAAAAAGGCCAGACTCCTGCAGGTGTGGGAACAGCAGCACAGCGCCTTCGCAGACCTCACCGAGGCCTGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS GCA 72 bp | TCTAGACAGGCCTCGGTGAGGTCTGCGAAGGCGCTGTaGTGCTGTTCCCACACCTGCAGGAGTCTGGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SRQASVRSAKAL*CCSHTCRSLAF Trigger: AAAGGCCAGACTCCTGCAGGTGTGGGAACAGCAGCACAGCGCCTTCGCAGACCTCACCGAGGCCTGTCTAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS CCA 72 bp | ACCCGAGGCTCAAGCTTCTGCAGCTGCGCCAATGGCTaGGGTGCCCCATCATCACTGGGTTGGTTGCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: TRGSSFCSCANG*GAPSSLGWLPS Trigger: AGAAGGCAACCAACCCAGTGATGATGGGGCACCCCAGCCATTGGCGCAGCTGCAGAAGCTTGAGCCTCGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114999.8 ENSMUST00000185102.2 |
||
| CDS CCA 72 bp | AGGCGCTGTGCTGCTGTTCCCACACCTGCAGGAGTCTaGCCTTTTTCTCCTCAGAGAGAGTCTGCCACAGGT | + |
|
Preference number: 6 (lower is better) Translates to: RRCAAVPTPAGV*PFSPQRESATG Trigger: ACCTGTGGCAGACTCTCTCTGAGGAGAAAAAGGCCAGACTCCTGCAGGTGTGGGAACAGCAGCACAGCGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS GCA 72 bp | TGCAGGAGTCTGGCCTTTTTCTCCTCAGAGAGAGTCTaGCACAGGTGGGAGATGGCGGCAGAGACAATAGGA | + |
|
Preference number: 6 (lower is better) Translates to: CRSLAFFSSERV*HRWEMAAETIG Trigger: TCCTATTGTCTCTGCCGCCATCTCCCACCTGTGGCAGACTCTCTCTGAGGAGAAAAAGGCCAGACTCCTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS GCA 72 bp | TTGCAGGTGGCAAACATAGCGCTGATGTTAGACATATaGTGGGCCTCACTCTTGTCCAGGAAACTTGCCACG | + |
|
Preference number: 6 (lower is better) Translates to: LQVANIALMLDI*WASLLSRKLAT Trigger: CGTGGCAAGTTTCCTGGACAAGAGTGAGGCCCAGCATATGTCTAACATCAGCGCTATGTTTGCCACCTGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS GCA 72 bp | CAGATCGTCAAAGGTCTCCAGGCACTTCAGCAACATTaGATCATCATCATCTGGGGGCTCTGGTTCCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: QIVKGLQALQQH*IIIIWGLWFLV Trigger: AACCAGGAACCAGAGCCCCCAGATGATGATGATGCAATGTTGCTGAAGTGCCTGGAGACCTTTGACGATCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS CCA 72 bp | CAGGTGGCAAACATAGCGCTGATGTTAGACATATGCTaGGCCTCACTCTTGTCCAGGAAACTTGCCACGTCA | + |
|
Preference number: 6 (lower is better) Translates to: QVANIALMLDIC*ASLLSRKLATS Trigger: TGACGTGGCAAGTTTCCTGGACAAGAGTGAGGCCCAGCATATGTCTAACATCAGCGCTATGTTTGCCACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS CAA 72 bp | ACAGATCGTCAAAGGTCTCCAGGCACTTCAGCAACATaGCATCATCATCATCTGGGGGCTCTGGTTCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: TDRQRSPGTSAT*HHHHLGALVPG Trigger: ACCAGGAACCAGAGCCCCCAGATGATGATGATGCAATGTTGCTGAAGTGCCTGGAGACCTTTGACGATCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS CAA 90 bp | TCAGCAACTTATCCAGGCTTTCTTCCTGTTCCTGAATATGAATCTTaGTCCTATTCAGTACCTGCCACAGGGTGGCTCGATGGCGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SATYPGFLPVPEYES*SYSVPATGWLDGGP Trigger: AGGCCCGCCATCGAGCCACCCTGTGGCAGGTACTGAATAGGACAAAGATTCATATTCAGGAACAGGAAGAAAGCCTGGATAAGTTGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185102.2 |
||
| CDS CAA 90 bp | GTGGCAAACATAGCGCTGATGTTAGACATATGCTGGGCCTCACTCTaGTCCAGGAAACTTGCCACGTCAAAAGCATCTTCAAAAAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: VANIALMLDICWASL*SRKLATSKASSKRI Trigger: GATCCTTTTTGAAGATGCTTTTGACGTGGCAAGTTTCCTGGACAAGAGTGAGGCCCAGCATATGTCTAACATCAGCGCTATGTTTGCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS GCA 72 bp | TCCTTGACCTCCTCTAAGCTGTTGGGATTCCCATCTTaGAGGTTGAAGGATGCTTTGAGCTTCAGCAACTTA | + |
|
Preference number: 6 (lower is better) Translates to: SLTSSKLLGFPS*RLKDALSFSNL Trigger: TAAGTTGCTGAAGCTCAAAGCATCCTTCAACCTGCAAGATGGGAATCCCAACAGCTTAGAGGAGGTCAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114999.8 ENSMUST00000185102.2 |
||
| CDS TCA 72 bp | TCTTTGTCCTATTCAGTACCTGCCACTTTGAGGCTGTaGTATCAGACTGGGAGTAAACTGCCTTCCTTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SLSYSVPATLRL*YQTGSKLPSLG Trigger: ACCTAAGGAAGGCAGTTTACTCCCAGTCTGATATCACAGCCTCAAAGTGGCAGGTACTGAATAGGACAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031876.12 ENSMUST00000114999.8 |
||
| CDS GCA 72 bp | AGACATATGCTGGGCCTCACTCTTGTCCAGGAAACTTaGCACGTCAAAAGCATCTTCAAAAAGGATCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RHMLGLTLVQET*HVKSIFKKDLF Trigger: GAAGAGATCCTTTTTGAAGATGCTTTTGACGTGGCAAGTTTCCTGGACAAGAGTGAGGCCCAGCATATGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS CCA 72 bp | AACATTGCATCATCATCATCTGGGGGCTCTGGTTCCTaGTTTAATGGAGTGTTAACACAGCCAAGGCTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: NIASSSSGGSGS*FNGVLTQPRLL Trigger: CAAAAGCCTTGGCTGTGTTAACACTCCATTAAACCAGGAACCAGAGCCCCCAGATGATGATGATGCAATGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114997.3 ENSMUST00000114999.8 |
||
| CDS CAA 72 bp | CTGTCATTCTCGGAATACATTCTGGCATATTCTTCCTaGACCTCCTCTAAGCTGTTGGGATTCCCATCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LSFSEYILAYSS*TSSKLLGFPSC Trigger: GCAAGATGGGAATCCCAACAGCTTAGAGGAGGTCAAGGAAGAATATGCCAGAATGTATTCCGAGAATGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114999.8 ENSMUST00000185102.2 |
||
| CDS CAA 90 bp | AGGAATACACTGTCATTCTCGGAATACATTCTGGCATATTCTTCCTaGACCTCCTCTAAGCTGTTGGGATTCCCATCTTGCAGGTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RNTLSFSEYILAYSS*TSSKLLGFPSCRLK Trigger: CTTCAACCTGCAAGATGGGAATCCCAACAGCTTAGAGGAGGTCAAGGAAGAATATGCCAGAATGTATTCCGAGAATGACAGTGTATTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114999.8 ENSMUST00000185102.2 |
||
| CDS TCA 72 bp | TGTCATTCTCGGAATACATTCTGGCATATTCTTCCTTaGCCTCCTCTAAGCTGTTGGGATTCCCATCTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: CHSRNTFWHILP*PPLSCWDSHLA Trigger: TGCAAGATGGGAATCCCAACAGCTTAGAGGAGGTCAAGGAAGAATATGCCAGAATGTATTCCGAGAATGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031876.12 ENSMUST00000114999.8 ENSMUST00000185102.2 |
||