Pregenerated sensors for STPG3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036770Ensembl transcript IDs: ENSMUST00000043774.11, ENSMUST00000114363.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGACCACAGTTCAGAAGAATCATTTGCATCTTGGTATAGTGGGGTaGAAGGGGACTCTGGGAAGACTCTTCTTGTTGGACAGCCTAAGC | + |
|
Preference number: 1 (lower is better) Translates to: ETTVQKNHLHLGIVG*KGTLGRLFLLDSLS Trigger: GCTTAGGCTGTCCAACAAGAAGAGTCTTCCCAGAGTCCCCTTTCACCCCACTATACCAAGATGCAAATGATTCTTCTGAACTGTGGTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| 3UTR-3UTR TCA 90 bp | GCCACATATTCAAGACAGCCCATTGGGCAAAGGATGGGCAACCAGGCACACCAGAGCCAGAAGAGTGGGTaGGGGGTGTCTAGAGGATCA | + |
|
Preference number: 2 (lower is better) Translates to: ATYSRQPIGQRMGNQAHQSQKSG*GVSRGS Trigger: TGATCCTCTAGACACCCCTCACCCACTCTTCTGGCT...CTGGTGTGCCTGGTTGCCCATCCTTTGCCCAATGGGCTGTCTTGAATATGTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| 3UTR-3UTR TCA 90 bp | GCAGAAAGCCACATATTCAAGACAGCCCATTGGGCAAAGGATGGGCAACCAGGCAGCCAGAAGAGTGGGTaGGGGGTGTCTAGAGGATCA | + |
|
Preference number: 2 (lower is better) Translates to: AESHIFKTAHWAKDGQPGSQKSG*GVSRGS Trigger: TGATCCTCTAGACACCCCTCACCCACTCTTCTGGCT...GCCTGGTTGCCCATCCTTTGCCCAATGGGCTGTCTTGAATATGTGGCTTTCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTCAAGACAGCCCATTGGGCAAAGGATGGGCAACCAGGCACACCAGAGACCACCTTGGTATAGTGGGGTaGAAGGGGACTCTGGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: IQDSPLGKGWATRHTRDHLGIVG*KGTLGR Trigger: TCTTCCCAGAGTCCCCTTTCACCCCACTATACCAAG...GTGGTCTCTGGTGTGCCTGGTTGCCCATCCTTTGCCCAATGGGCTGTCTTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCCATTGGGCAAAGGATGGGCAACCAGGCACACCAGAGACCACAGTTCAGAAGGGTGAAAGGGGACTCTaGGAAGACTCTTCTTGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: AHWAKDGQPGTPETTVQKGERGL*EDSSCW Trigger: CCAACAAGAAGAGTCTTCCCAGAGTCCCCTTTCACC...CTTCTGAACTGTGGTCTCTGGTGTGCCTGGTTGCCCATCCTTTGCCCAATGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGGGCAACCAGGCACACCAGAGACCACAGTTCAGAAGAATCATTTGCATCTTGGGTGAAAGGGGACTCTaGGAAGACTCTTCTTGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: MGNQAHQRPQFRRIICILGERGL*EDSSCW Trigger: CCAACAAGAAGAGTCTTCCCAGAGTCCCCTTTCACC...CAAGATGCAAATGATTCTTCTGAACTGTGGTCTCTGGTGTGCCTGGTTGCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| 3UTR-3UTR CCA 90 bp | TATTCAAGACAGCCCATTGGGCAAAGGATGGGCAACCAGGCACACCAGAGACCAGAATCATTTGCATCTTaGTATAGTGGGGTGAAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: YSRQPIGQRMGNQAHQRPESFAS*YSGVKG Trigger: CCCTTTCACCCCACTATACCAAGATGCAAATGATTC...TGGTCTCTGGTGTGCCTGGTTGCCCATCCTTTGCCCAATGGGCTGTCTTGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGAAAGCCACATATTCAAGACAGCCCATTGGGCAAAGGATGGGCAACCAGGCAGAATCATTTGCATCTTaGTATAGTGGGGTGAAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: QKATYSRQPIGQRMGNQAESFAS*YSGVKG Trigger: CCCTTTCACCCCACTATACCAAGATGCAAATGATTC...TGCCTGGTTGCCCATCCTTTGCCCAATGGGCTGTCTTGAATATGTGGCTTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| 3UTR CCA 72 bp | AGGGAAGCAGAAAGCCACATATTCAAGACAGCCCATTaGGCAAAGGATGGGCAACCAGGCACACCAGAGACC | + |
|
Preference number: 3 (lower is better) Translates to: REAESHIFKTAH*AKDGQPGTPET Trigger: GGTCTCTGGTGTGCCTGGTTGCCCATCCTTTGCCCAATGGGCTGTCTTGAATATGTGGCTTTCTGCTTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCCCATTGGGCAAAGGATGGGCAACCAGGCACACCAGAGACCACAGTTCAGAAGGAAGACTCTTCTTGTaGGACAGCCTAAGCCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SPLGKGWATRHTRDHSSEGRLFL*DSLSQK Trigger: CTTCTGGCTTAGGCTGTCCAACAAGAAGAGTCTTCC...TTCTGAACTGTGGTCTCTGGTGTGCCTGGTTGCCCATCCTTTGCCCAATGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| 3UTR CCA 72 bp | AAGCCACATATTCAAGACAGCCCATTGGGCAAAGGATaGGCAACCAGGCACACCAGAGACCACAGTTCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: KPHIQDSPLGKG*ATRHTRDHSSE Trigger: TTCTGAACTGTGGTCTCTGGTGTGCCTGGTTGCCCATCCTTTGCCCAATGGGCTGTCTTGAATATGTGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGACCTTAGGTGAGTGGATTAGATTGTCCCACATTGCCTTTTCCTATTCTATCATTCAAGACAGCCCATaGGGCAAAGGATGGGCAACC | + |
|
Preference number: 3 (lower is better) Translates to: WTLGEWIRLSHIAFSYSIIQDSP*GKGWAT Trigger: GGTTGCCCATCCTTTGCCCAATGGGCTGTCTTGAAT...GATAGAATAGGAAAAGGCAATGTGGGACAATCTAATCCACTCACCTAAGGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043774.11 |
||
| 3UTR TCA 72 bp | AGCTTAGGGTTAGTTCCCAGACTGCCATTTCAATCCTaGAGAAAAGAACACCACGCAGGAACAGAGAAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SLGLVPRLPFQS*RKEHHAGTEKA Trigger: GGCTTTCTCTGTTCCTGCGTGGTGTTCTTTTCTTCAGGATTGAAATGGCAGTCTGGGAACTAACCCTAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043774.11 |
||
| 3UTR CCA 72 bp | ACCAGAGACCACAGTTCAGAAGAATCATTTGCATCTTaGTATAGTGGGGTGAAAGGGGACTCTGGGAAGACT | + |
|
Preference number: 3 (lower is better) Translates to: TRDHSSEESFAS*YSGVKGDSGKT Trigger: AGTCTTCCCAGAGTCCCCTTTCACCCCACTATACCAAGATGCAAATGATTCTTCTGAACTGTGGTCTCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCTTAGGTGAGTGGATTAGATTGTCCCACATTGCCTTTTCCTATTCTATCCTAGGAAGACTCTTCTTGTaGGACAGCCTAAGCCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: TLGEWIRLSHIAFSYSILGRLFL*DSLSQK Trigger: CTTCTGGCTTAGGCTGTCCAACAAGAAGAGTCTTCC...TAGGATAGAATAGGAAAAGGCAATGTGGGACAATCTAATCCACTCACCTAAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043774.11 |
||
| CDS-3UTR TCA 90 bp | GCCACATATTCAAGACAGCCCATTGGGCAAAGGATGGGCAACCAGGCACACCAGGGCGGTCTCCAAAGCTaGAGGCCGGGAAGGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ATYSRQPIGQRMGNQAHQGGLQS*RPGRQA Trigger: AGCCTGCCTTCCCGGCCTTCAGCTTTGGAGACCGCC...CTGGTGTGCCTGGTTGCCCATCCTTTGCCCAATGGGCTGTCTTGAATATGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS-3UTR TCA 90 bp | TATTCAAGACAGCCCATTGGGCAAAGGATGGGCAACCAGGCACACCAGAGACCAGGCGGTCTCCAAAGCTaGAGGCCGGGAAGGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YSRQPIGQRMGNQAHQRPGGLQS*RPGRQA Trigger: AGCCTGCCTTCCCGGCCTTCAGCTTTGGAGACCGCC...TGGTCTCTGGTGTGCCTGGTTGCCCATCCTTTGCCCAATGGGCTGTCTTGAATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS-3UTR GCA 90 bp | GCCACATATTCAAGACAGCCCATTGGGCAAAGGATGGGCAACCAGGCACACCAGTGGTCTGCCATGCCCTaGGGCCACCACCCTCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: ATYSRQPIGQRMGNQAHQWSAMP*GHHPLE Trigger: TTCGAGAGGGTGGTGGCCGCAGGGCATGGCAGACCA...CTGGTGTGCCTGGTTGCCCATCCTTTGCCCAATGGGCTGTCTTGAATATGTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS-3UTR GCA 90 bp | CCCATTGGGCAAAGGATGGGCAACCAGGCACACCAGAGACCACAGTTCAGAAGATGGTCTGCCATGCCCTaGGGCCACCACCCTCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: PIGQRMGNQAHQRPQFRRWSAMP*GHHPLE Trigger: TTCGAGAGGGTGGTGGCCGCAGGGCATGGCAGACCA...TCTTCTGAACTGTGGTCTCTGGTGTGCCTGGTTGCCCATCCTTTGCCCAATGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS-3UTR GCA 90 bp | GCAGAAAGCCACATATTCAAGACAGCCCATTGGGCAAAGGATGGGCAACCAGGCCCACATGGTCTGCCATaGCCTGCGGCCACCACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AESHIFKTAHWAKDGQPGPHGLP*PAATTL Trigger: GAGGGTGGTGGCCGCAGGGCATGGCAGACCATGTGG...GCCTGGTTGCCCATCCTTTGCCCAATGGGCTGTCTTGAATATGTGGCTTTCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS-3UTR TCA 90 bp | GCCACATATTCAAGACAGCCCATTGGGCAAAGGATGGGCAACCAGGCACACCAGCATGGAGAAGGCAGGTaGGCGTGTGCTCTGCAGACG | + |
|
Preference number: 4 (lower is better) Translates to: ATYSRQPIGQRMGNQAHQHGEGR*ACALQT Trigger: CGTCTGCAGAGCACACGCTCACCTGCCTTCTCCATG...CTGGTGTGCCTGGTTGCCCATCCTTTGCCCAATGGGCTGTCTTGAATATGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS-3UTR GCA 90 bp | CCATTGGGCAAAGGATGGGCAACCAGGCACACCAGAGACCACAGTTCAGAAGAATGGAGCCACATGGTCTaGCATGCCCTGCGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: PLGKGWATRHTRDHSSEEWSHMV*HALRPP Trigger: TGGTGGCCGCAGGGCATGGCAGACCATGTGGCTCCA...TTCTTCTGAACTGTGGTCTCTGGTGTGCCTGGTTGCCCATCCTTTGCCCAATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS-3UTR GCA 90 bp | ATTCAAGACAGCCCATTGGGCAAAGGATGGGCAACCAGGCACACCAGAGACCACGGAGCTGACCCAGGATaGAAACGCAGGAGACCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IQDSPLGKGWATRHTRDHGADPG*KRRRPA Trigger: AGCCGGTCTCCTGCGTTTGCATCCTGGGTCAGCTCC...GTGGTCTCTGGTGTGCCTGGTTGCCCATCCTTTGCCCAATGGGCTGTCTTGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS-3UTR GCA 90 bp | CACATATTCAAGACAGCCCATTGGGCAAAGGATGGGCAACCAGGCACACCAGAGGGAGCTGACCCAGGATaGAAACGCAGGAGACCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HIFKTAHWAKDGQPGTPEGADPG*KRRRPA Trigger: AGCCGGTCTCCTGCGTTTGCATCCTGGGTCAGCTCC...CTCTGGTGTGCCTGGTTGCCCATCCTTTGCCCAATGGGCTGTCTTGAATATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS-3UTR CCA 90 bp | CAGAAAGCCACATATTCAAGACAGCCCATTGGGCAAAGGATGGGCAACCAGGCACACCTCGTACTGGGCTaGGCCAGGGACATCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QKATYSRQPIGQRMGNQAHLVLG*ARDIQV Trigger: GACCTGGATGTCCCTGGCCCAGCCCAGTACGAGGTG...TGCCTGGTTGCCCATCCTTTGCCCAATGGGCTGTCTTGAATATGTGGCTTTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS-3UTR CCA 90 bp | CCATTGGGCAAAGGATGGGCAACCAGGCACACCAGAGACCACAGTTCAGAAGAAAAAGGGCCTGTGTCGTaGCGCTTGGGTCTGCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: PLGKGWATRHTRDHSSEEKGPVS*RLGLRT Trigger: AGTGCGCAGACCCAAGCGCCACGACACAGGCCCTTT...TTCTTCTGAACTGTGGTCTCTGGTGTGCCTGGTTGCCCATCCTTTGCCCAATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS-3UTR CCA 90 bp | CACATATTCAAGACAGCCCATTGGGCAAAGGATGGGCAACCAGGCACACCAGAGACACAGCAGCAGCACTaGGCTGGGTGGGATGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HIFKTAHWAKDGQPGTPETQQQH*AGWDEE Trigger: CTCTTCATCCCACCCAGCCCAGTGCTGCTGCTGTGT...CTCTGGTGTGCCTGGTTGCCCATCCTTTGCCCAATGGGCTGTCTTGAATATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043774.11 |
||
| CDS-3UTR TCA 90 bp | GCATCTTGGTATAGTGGGGTGAAAGGGGACTCTGGGAAGACTCTTCTTGTTGGACATGGAGAAGGCAGGTaGGCGTGTGCTCTGCAGACG | + |
|
Preference number: 4 (lower is better) Translates to: ASWYSGVKGDSGKTLLVGHGEGR*ACALQT Trigger: CGTCTGCAGAGCACACGCTCACCTGCCTTCTCCATG...TCCAACAAGAAGAGTCTTCCCAGAGTCCCCTTTCACCCCACTATACCAAGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS-3UTR CCA 90 bp | CCATTGGGCAAAGGATGGGCAACCAGGCACACCAGAGACCACAGTTCAGAAGAAGGTACTTGCGACCGATaGTGTATTGGGGGTGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLGKGWATRHTRDHSSEEGTCDR*CIGGVE Trigger: CTCCACACCCCCAATACACCATCGGTCGCAAGTACC...TTCTTCTGAACTGTGGTCTCTGGTGTGCCTGGTTGCCCATCCTTTGCCCAATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| 3UTR CAA 72 bp | CAGGGAAGCAGAAAGCCACATATTCAAGACAGCCCATaGGGCAAAGGATGGGCAACCAGGCACACCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QGSRKPHIQDSP*GKGWATRHTRD Trigger: GTCTCTGGTGTGCCTGGTTGCCCATCCTTTGCCCAATGGGCTGTCTTGAATATGTGGCTTTCTGCTTCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS-3UTR GCA 90 bp | CAACCAGGCACACCAGAGACCACAGTTCAGAAGAATCATTTGCATCTTGGTATACCACATGGTCTGCCATaGCCTGCGGCCACCACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QPGTPETTVQKNHLHLGIPHGLP*PAATTL Trigger: GAGGGTGGTGGCCGCAGGGCATGGCAGACCATGTGG...TATACCAAGATGCAAATGATTCTTCTGAACTGTGGTCTCTGGTGTGCCTGGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS-3UTR CCA 90 bp | CATTGGGCAAAGGATGGGCAACCAGGCACACCAGAGACCACAGTTCAGAAGAATGCAGTCTCCAGCTCCTaGTCCCACCATAACACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HWAKDGQPGTPETTVQKNAVSSS*SHHNTA Trigger: TGCTGTGTTATGGTGGGACCAGGAGCTGGAGACTGC...ATTCTTCTGAACTGTGGTCTCTGGTGTGCCTGGTTGCCCATCCTTTGCCCAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043774.11 |
||
| CDS-3UTR CCA 90 bp | CCAGGCACACCAGAGACCACAGTTCAGAAGAATCATTTGCATCTTGGTATAGTGCACCTCGTACTGGGCTaGGCCAGGGACATCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGTPETTVQKNHLHLGIVHLVLG*ARDIQV Trigger: GACCTGGATGTCCCTGGCCCAGCCCAGTACGAGGTG...CACTATACCAAGATGCAAATGATTCTTCTGAACTGTGGTCTCTGGTGTGCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS-3UTR CCA 90 bp | CATTGGGCAAAGGATGGGCAACCAGGCACACCAGAGACCACAGTTCAGAAGAATCTCGCAGAGACATATTaGGCACCTCGTACTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HWAKDGQPGTPETTVQKNLAETY*APRTGL Trigger: CAGCCCAGTACGAGGTGCCCAATATGTCTCTGCGAG...ATTCTTCTGAACTGTGGTCTCTGGTGTGCCTGGTTGCCCATCCTTTGCCCAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS-3UTR CCA 90 bp | ATGGGCAACCAGGCACACCAGAGACCACAGTTCAGAAGAATCATTTGCATCTTGCACTTTGGAGCCACATaGTCTGCCATGCCCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: MGNQAHQRPQFRRIICILHFGAT*SAMPCG Trigger: GCCGCAGGGCATGGCAGACCATGTGGCTCCAAAGTG...CAAGATGCAAATGATTCTTCTGAACTGTGGTCTCTGGTGTGCCTGGTTGCCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS-3UTR CCA 90 bp | AGCCCATTGGGCAAAGGATGGGCAACCAGGCACACCAGAGACCACAGTTCAGAAGGATCTCTTCATCTTTaGGTGCCACATCTCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SPLGKGWATRHTRDHSSEGSLHL*VPHLIP Trigger: TGGGATGAGATGTGGCACCCAAAGATGAAGAGATCC...TTCTGAACTGTGGTCTCTGGTGTGCCTGGTTGCCCATCCTTTGCCCAATGGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043774.11 |
||
| CDS-3UTR CCA 90 bp | GCAGAAAGCCACATATTCAAGACAGCCCATTGGGCAAAGGATGGGCAACCAGGCAAGGGGCTTTCACTTTaGAGCCACATGGTCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AESHIFKTAHWAKDGQPGKGLSL*SHMVCH Trigger: ATGGCAGACCATGTGGCTCCAAAGTGAAAGCCCCTT...GCCTGGTTGCCCATCCTTTGCCCAATGGGCTGTCTTGAATATGTGGCTTTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS-3UTR GCA 90 bp | CCCATTGGGCAAAGGATGGGCAACCAGGCACACCAGAGACCACAGTTCAGAAGATTGAAGTCGGTCTTCTaGATGAAGGGGCTTTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: PIGQRMGNQAHQRPQFRRLKSVF*MKGLSL Trigger: AAGTGAAAGCCCCTTCATGCAGAAGACCGACTTCAA...TCTTCTGAACTGTGGTCTCTGGTGTGCCTGGTTGCCCATCCTTTGCCCAATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS-3UTR TCA 90 bp | GGCAACCAGGCACACCAGAGACCACAGTTCAGAAGAATCATTTGCATCTTGGTAGGTCTGCGCACTCCTTaGATAACTACTCCAGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: GNQAHQRPQFRRIICILVGLRTP*ITTPGE Trigger: TTCGCCTGGAGTAGTTATTCAAGGAGTGCGCAGACC...TACCAAGATGCAAATGATTCTTCTGAACTGTGGTCTCTGGTGTGCCTGGTTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS-3UTR TCA 90 bp | ATGGGCAACCAGGCACACCAGAGACCACAGTTCAGAAGAATCATTTGCATCTTGGGTCTGCGCACTCCTTaGATAACTACTCCAGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: MGNQAHQRPQFRRIICILGLRTP*ITTPGE Trigger: TTCGCCTGGAGTAGTTATTCAAGGAGTGCGCAGACC...CAAGATGCAAATGATTCTTCTGAACTGTGGTCTCTGGTGTGCCTGGTTGCCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS-3UTR GCA 90 bp | CACATATTCAAGACAGCCCATTGGGCAAAGGATGGGCAACCAGGCACACCAGAGTTGAAGTCGGTCTTCTaGATGAAGGGGCTTTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: HIFKTAHWAKDGQPGTPELKSVF*MKGLSL Trigger: AAGTGAAAGCCCCTTCATGCAGAAGACCGACTTCAA...CTCTGGTGTGCCTGGTTGCCCATCCTTTGCCCAATGGGCTGTCTTGAATATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTCCTATTCTATCCTAGGTCAGAAAGCTTAGGGTTAGTTCCCAGACTGCCACTGTGTCGTGGCGCTTaGGTCTGCGCACTCCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LFLFYPRSESLGLVPRLPLCRGA*VCALLE Trigger: TTCAAGGAGTGCGCAGACCCAAGCGCCACGACACAG...TGGCAGTCTGGGAACTAACCCTAAGCTTTCTGACCTAGGATAGAATAGGAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043774.11 |
||
| CDS-3UTR CCA 90 bp | CAACCAGGCACACCAGAGACCACAGTTCAGAAGAATCATTTGCATCTTGGTATACTGTGTCGTGGCGCTTaGGTCTGCGCACTCCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QPGTPETTVQKNHLHLGILCRGA*VCALLE Trigger: TTCAAGGAGTGCGCAGACCCAAGCGCCACGACACAG...TATACCAAGATGCAAATGATTCTTCTGAACTGTGGTCTCTGGTGTGCCTGGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS-3UTR CCA 90 bp | CAACCAGGCACACCAGAGACCACAGTTCAGAAGAATCATTTGCATCTTGGTATACTCGCAGAGACATATTaGGCACCTCGTACTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QPGTPETTVQKNHLHLGILAETY*APRTGL Trigger: CAGCCCAGTACGAGGTGCCCAATATGTCTCTGCGAG...TATACCAAGATGCAAATGATTCTTCTGAACTGTGGTCTCTGGTGTGCCTGGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS-3UTR CCA 90 bp | CAACCAGGCACACCAGAGACCACAGTTCAGAAGAATCATTTGCATCTTGGTATAGGTACTTGCGACCGATaGTGTATTGGGGGTGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QPGTPETTVQKNHLHLGIGTCDR*CIGGVE Trigger: CTCCACACCCCCAATACACCATCGGTCGCAAGTACC...TATACCAAGATGCAAATGATTCTTCTGAACTGTGGTCTCTGGTGTGCCTGGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS-3UTR CCA 90 bp | ATGGGCAACCAGGCACACCAGAGACCACAGTTCAGAAGAATCATTTGCATCTTGAAGGGGCTTTCACTTTaGAGCCACATGGTCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: MGNQAHQRPQFRRIICILKGLSL*SHMVCH Trigger: ATGGCAGACCATGTGGCTCCAAAGTGAAAGCCCCTT...CAAGATGCAAATGATTCTTCTGAACTGTGGTCTCTGGTGTGCCTGGTTGCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS-3UTR CCA 90 bp | ACCTTAGGTGAGTGGATTAGATTGTCCCACATTGCCTTTTCCTATTCTATCCTAAAAGGGCCTGTGTCGTaGCGCTTGGGTCTGCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: TLGEWIRLSHIAFSYSILKGPVS*RLGLRT Trigger: AGTGCGCAGACCCAAGCGCCACGACACAGGCCCTTT...TAGGATAGAATAGGAAAAGGCAATGTGGGACAATCTAATCCACTCACCTAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043774.11 |
||
| 3UTR CAA 72 bp | TCAGGTAGATGCTGGACCTTAGGTGAGTGGATTAGATaGTCCCACATTGCCTTTTCCTATTCTATCCTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SGRCWTLGEWIR*SHIAFSYSILG Trigger: ACCTAGGATAGAATAGGAAAAGGCAATGTGGGACAATCTAATCCACTCACCTAAGGTCCAGCATCTACCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043774.11 |
||
| CDS-3UTR TCA 90 bp | ACCTTAGGTGAGTGGATTAGATTGTCCCACATTGCCTTTTCCTATTCTATCCTAAGTGTTTGCCTCCATTaGTGTAAAAATTTGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TLGEWIRLSHIAFSYSILSVCLH*CKNLPG Trigger: TCCTGGCAAATTTTTACATCAATGGAGGCAAACACT...TAGGATAGAATAGGAAAAGGCAATGTGGGACAATCTAATCCACTCACCTAAGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043774.11 |
||
| CDS CCA 90 bp | ACAGAGCGATGGCGGTCTCCAAAGCTGAAGGCCGGGAAGGCAGGCTaGCTCAGCGGCGTGTACTCGGCGGGTGATGGCCACTTTGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TERWRSPKLKAGKAG*LSGVYSAGDGHFVS Trigger: AGAGACAAAGTGGCCATCACCCGCCGAGTACACGCCGCTGAGCCAGCCTGCCTTCCCGGCCTTCAGCTTTGGAGACCGCCATCGCTCTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS CCA 90 bp | AGGCAGTCTCCAGCTCCTGGTCCCACCATAACACAGCAGCAGCACTaGGCTGGGTGGGATGAAGAGGTTTCTGACTCAGGGGGCCCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: RQSPAPGPTITQQQH*AGWDEEVSDSGGPE Trigger: CTCGGGGCCCCCTGAGTCAGAAACCTCTTCATCCCACCCAGCCCAGTGCTGCTGCTGTGTTATGGTGGGACCAGGAGCTGGAGACTGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043774.11 |
||
| CDS CCA 90 bp | ATCCCTGGGCGGAAGCGACTCTCCGGCATTTTGACAACAGAGCGATaGCGGTCTCCAAAGCTGAAGGCCGGGAAGGCAGGCTGGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IPGRKRLSGILTTER*RSPKLKAGKAGWLS Trigger: GCTGAGCCAGCCTGCCTTCCCGGCCTTCAGCTTTGGAGACCGCCATCGCTCTGTTGTCAAAATGCCGGAGAGTCGCTTCCGCCCAGGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS CCA 90 bp | CACCTCGTACTGGGCTGGGCCAGGGACATCCAGGTCCATCAGGATTaGAGGACGTCTCTCGAGCCACAGCTCTCTCAGAGTCCCTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HLVLGWARDIQVHQD*RTSLEPQLSQSPCA Trigger: AGCACAGGGACTCTGAGAGAGCTGTGGCTCGAGAGACGTCCTCCAATCCTGATGGACCTGGATGTCCCTGGCCCAGCCCAGTACGAGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS CCA 90 bp | GGGTGTGGAGAGGCCTCTCGCAGAGACATATTGGGCACCTCGTACTaGGCTGGGCCAGGGACATCCAGGTCCATCAGGATTGGAGGACGT | + |
|
Preference number: 5 (lower is better) Translates to: GCGEASRRDILGTSY*AGPGTSRSIRIGGR Trigger: ACGTCCTCCAATCCTGATGGACCTGGATGTCCCTGGCCCAGCCCAGTACGAGGTGCCCAATATGTCTCTGCGAGAGGCCTCTCCACACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS CCA 90 bp | ATGCCCTGCGGCCACCACCCTCTCGAACCGGGTACTTGCGACCGATaGTGTATTGGGGGTGTGGAGAGGCCTCTCGCAGAGACATATTGG | + |
|
Preference number: 5 (lower is better) Translates to: MPCGHHPLEPGTCDR*CIGGVERPLAETYW Trigger: CCAATATGTCTCTGCGAGAGGCCTCTCCACACCCCCAATACACCATCGGTCGCAAGTACCCGGTTCGAGAGGGTGGTGGCCGCAGGGCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS GCA 90 bp | CTTCTGCATGAAGGGGCTTTCACTTTGGAGCCACATGGTCTGCCATaGCCTGCGGCCACCACCCTCTCGAACCGGGTACTTGCGACCGAT | + |
|
Preference number: 5 (lower is better) Translates to: LLHEGAFTLEPHGLP*PAATTLSNRVLATD Trigger: ATCGGTCGCAAGTACCCGGTTCGAGAGGGTGGTGGCCGCAGGGCATGGCAGACCATGTGGCTCCAAAGTGAAAGCCCCTTCATGCAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS GCA 90 bp | TCGGTCTTCTGCATGAAGGGGCTTTCACTTTGGAGCCACATGGTCTaGCATGCCCTGCGGCCACCACCCTCTCGAACCGGGTACTTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: SVFCMKGLSLWSHMV*HALRPPPSRTGYLR Trigger: TCGCAAGTACCCGGTTCGAGAGGGTGGTGGCCGCAGGGCATGGCAGACCATGTGGCTCCAAAGTGAAAGCCCCTTCATGCAGAAGACCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS CCA 90 bp | TGGAGAGGCCTCTCGCAGAGACATATTGGGCACCTCGTACTGGGCTaGGCCAGGGACATCCAGGTCCATCAGGATTGGAGGACGTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: WRGLSQRHIGHLVLG*ARDIQVHQDWRTSL Trigger: GAGAGACGTCCTCCAATCCTGATGGACCTGGATGTCCCTGGCCCAGCCCAGTACGAGGTGCCCAATATGTCTCTGCGAGAGGCCTCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS TCA 90 bp | GACCCAGGATGCAAACGCAGGAGACCGGCTCATGGAGAAGGCAGGTaGGCGTGTGCTCTGCAGACGGTACCCAGGAAGGATGTTATAGGT | + |
|
Preference number: 5 (lower is better) Translates to: DPGCKRRRPAHGEGR*ACALQTVPRKDVIG Trigger: ACCTATAACATCCTTCCTGGGTACCGTCTGCAGAGCACACGCTCACCTGCCTTCTCCATGAGCCGGTCTCCTGCGTTTGCATCCTGGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS GCA 90 bp | ATGCAAACGCAGGAGACCGGCTCATGGAGAAGGCAGGTGAGCGTGTaGTCTGCAGACGGTACCCAGGAAGGATGTTATAGGTGTTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: MQTQETGSWRRQVSV*SADGTQEGCYRCWG Trigger: GCCCCAACACCTATAACATCCTTCCTGGGTACCGTCTGCAGAGCACACGCTCACCTGCCTTCTCCATGAGCCGGTCTCCTGCGTTTGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS-3UTR CAA 90 bp | GCCCATTGGGCAAAGGATGGGCAACCAGGCACACCAGAGACCACAGTTCAGAAGGAAGGGGCTTTCACTTaGGAGCCACATGGTCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AHWAKDGQPGTPETTVQKEGAFT*EPHGLP Trigger: TGGCAGACCATGTGGCTCCAAAGTGAAAGCCCCTTC...CTTCTGAACTGTGGTCTCTGGTGTGCCTGGTTGCCCATCCTTTGCCCAATGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS CCA 72 bp | TGGCGGTCTCCAAAGCTGAAGGCCGGGAAGGCAGGCTaGCTCAGCGGCGTGTACTCGGCGGGTGATGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: WRSPKLKAGKAG*LSGVYSAGDGH Trigger: GTGGCCATCACCCGCCGAGTACACGCCGCTGAGCCAGCCTGCCTTCCCGGCCTTCAGCTTTGGAGACCGCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS CAA 72 bp | CATGCCCTGCGGCCACCACCCTCTCGAACCGGGTACTaGCGACCGATGGTGTATTGGGGGTGTGGAGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: HALRPPPSRTGY*RPMVYWGCGEA Trigger: GGCCTCTCCACACCCCCAATACACCATCGGTCGCAAGTACCCGGTTCGAGAGGGTGGTGGCCGCAGGGCATG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS GCA 72 bp | ATGCCCTGCGGCCACCACCCTCTCGAACCGGGTACTTaGGACCGATGGTGTATTGGGGGTGTGGAGAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: MPCGHHPLEPGT*DRWCIGGVERP Trigger: AGGCCTCTCCACACCCCCAATACACCATCGGTCGCAAGTACCCGGTTCGAGAGGGTGGTGGCCGCAGGGCAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS CCA 72 bp | GGCCACCACCCTCTCGAACCGGGTACTTGCGACCGATaGTGTATTGGGGGTGTGGAGAGGCCTCTCGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GHHPLEPGTCDR*CIGGVERPLAE Trigger: CTCTGCGAGAGGCCTCTCCACACCCCCAATACACCATCGGTCGCAAGTACCCGGTTCGAGAGGGTGGTGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS CAA 90 bp | GCACCTCGTACTGGGCTGGGCCAGGGACATCCAGGTCCATCAGGATaGGAGGACGTCTCTCGAGCCACAGCTCTCTCAGAGTCCCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: APRTGLGQGHPGPSG*EDVSRATALSESLC Trigger: GCACAGGGACTCTGAGAGAGCTGTGGCTCGAGAGACGTCCTCCAATCCTGATGGACCTGGATGTCCCTGGCCCAGCCCAGTACGAGGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS GCA 72 bp | TGCATGAAGGGGCTTTCACTTTGGAGCCACATGGTCTaGCATGCCCTGCGGCCACCACCCTCTCGAACCGGG | + |
|
Preference number: 6 (lower is better) Translates to: CMKGLSLWSHMV*HALRPPPSRTG Trigger: CCCGGTTCGAGAGGGTGGTGGCCGCAGGGCATGGCAGACCATGTGGCTCCAAAGTGAAAGCCCCTTCATGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS GCA 72 bp | GAAGGGGCTTTCACTTTGGAGCCACATGGTCTGCCATaGCCTGCGGCCACCACCCTCTCGAACCGGGTACTT | + |
|
Preference number: 6 (lower is better) Translates to: EGAFTLEPHGLP*PAATTLSNRVL Trigger: AAGTACCCGGTTCGAGAGGGTGGTGGCCGCAGGGCATGGCAGACCATGTGGCTCCAAAGTGAAAGCCCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS CCA 72 bp | CTGGGCTGGGCCAGGGACATCCAGGTCCATCAGGATTaGAGGACGTCTCTCGAGCCACAGCTCTCTCAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: LGWARDIQVHQD*RTSLEPQLSQS Trigger: ACTCTGAGAGAGCTGTGGCTCGAGAGACGTCCTCCAATCCTGATGGACCTGGATGTCCCTGGCCCAGCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS CCA 72 bp | ATTGGGGGTGTGGAGAGGCCTCTCGCAGAGACATATTaGGCACCTCGTACTGGGCTGGGCCAGGGACATCCA | + |
|
Preference number: 6 (lower is better) Translates to: IGGVERPLAETY*APRTGLGQGHP Trigger: TGGATGTCCCTGGCCCAGCCCAGTACGAGGTGCCCAATATGTCTCTGCGAGAGGCCTCTCCACACCCCCAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS CAA 72 bp | ACTGGGCTGGGCCAGGGACATCCAGGTCCATCAGGATaGGAGGACGTCTCTCGAGCCACAGCTCTCTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: TGLGQGHPGPSG*EDVSRATALSE Trigger: CTCTGAGAGAGCTGTGGCTCGAGAGACGTCCTCCAATCCTGATGGACCTGGATGTCCCTGGCCCAGCCCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS CAA 72 bp | TATTGGGGGTGTGGAGAGGCCTCTCGCAGAGACATATaGGGCACCTCGTACTGGGCTGGGCCAGGGACATCC | + |
|
Preference number: 6 (lower is better) Translates to: YWGCGEASRRDI*GTSYWAGPGTS Trigger: GGATGTCCCTGGCCCAGCCCAGTACGAGGTGCCCAATATGTCTCTGCGAGAGGCCTCTCCACACCCCCAATA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS TCA 72 bp | TGCAAACGCAGGAGACCGGCTCATGGAGAAGGCAGGTaGGCGTGTGCTCTGCAGACGGTACCCAGGAAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: CKRRRPAHGEGR*ACALQTVPRKD Trigger: ATCCTTCCTGGGTACCGTCTGCAGAGCACACGCTCACCTGCCTTCTCCATGAGCCGGTCTCCTGCGTTTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS TCA 72 bp | GGGCCTGTGTCGTGGCGCTTGGGTCTGCGCACTCCTTaGATAACTACTCCAGGCGAAGATGGGAAGCGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GPVSWRLGLRTP*ITTPGEDGKRE Trigger: CTCACGCTTCCCATCTTCGCCTGGAGTAGTTATTCAAGGAGTGCGCAGACCCAAGCGCCACGACACAGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS CCA 72 bp | CCAGCTCCTGGTCCCACCATAACACAGCAGCAGCACTaGGCTGGGTGGGATGAAGAGGTTTCTGACTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PAPGPTITQQQH*AGWDEEVSDSG Trigger: CCCTGAGTCAGAAACCTCTTCATCCCACCCAGCCCAGTGCTGCTGCTGTGTTATGGTGGGACCAGGAGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043774.11 |
||
| CDS CCA 72 bp | CTCTCGCAGAGACATATTGGGCACCTCGTACTGGGCTaGGCCAGGGACATCCAGGTCCATCAGGATTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSQRHIGHLVLG*ARDIQVHQDWR Trigger: CCTCCAATCCTGATGGACCTGGATGTCCCTGGCCCAGCCCAGTACGAGGTGCCCAATATGTCTCTGCGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS CCA 72 bp | GAGGCCTCTCGCAGAGACATATTGGGCACCTCGTACTaGGCTGGGCCAGGGACATCCAGGTCCATCAGGATT | + |
|
Preference number: 6 (lower is better) Translates to: EASRRDILGTSY*AGPGTSRSIRI Trigger: AATCCTGATGGACCTGGATGTCCCTGGCCCAGCCCAGTACGAGGTGCCCAATATGTCTCTGCGAGAGGCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS CAA 90 bp | TGTCTCTCGGTTGAAGTCGGTCTTCTGCATGAAGGGGCTTTCACTTaGGAGCCACATGGTCTGCCATGCCCTGCGGCCACCACCCTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: CLSVEVGLLHEGAFT*EPHGLPCPAATTLS Trigger: CGAGAGGGTGGTGGCCGCAGGGCATGGCAGACCATGTGGCTCCAAAGTGAAAGCCCCTTCATGCAGAAGACCGACTTCAACCGAGAGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS CAA 90 bp | CTCAGCGGCGTGTACTCGGCGGGTGATGGCCACTTTGTCTCTCGGTaGAAGTCGGTCTTCTGCATGAAGGGGCTTTCACTTTGGAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LSGVYSAGDGHFVSR*KSVFCMKGLSLWSH Trigger: GTGGCTCCAAAGTGAAAGCCCCTTCATGCAGAAGACCGACTTCAACCGAGAGACAAAGTGGCCATCACCCGCCGAGTACACGCCGCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS GCA 72 bp | CAGGAGACCGGCTCATGGAGAAGGCAGGTGAGCGTGTaGTCTGCAGACGGTACCCAGGAAGGATGTTATAGG | + |
|
Preference number: 6 (lower is better) Translates to: QETGSWRRQVSV*SADGTQEGCYR Trigger: CCTATAACATCCTTCCTGGGTACCGTCTGCAGAGCACACGCTCACCTGCCTTCTCCATGAGCCGGTCTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS CCA 72 bp | TCTGCAGACGGTACCCAGGAAGGATGTTATAGGTGTTaGGGCTGGGTCGCTTCTCGCCAGAGGGCTTTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SADGTQEGCYRC*GWVASRQRALR Trigger: CCTCAAAGCCCTCTGGCGAGAAGCGACCCAGCCCCAACACCTATAACATCCTTCCTGGGTACCGTCTGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS CAA 72 bp | GTTGAAGTCGGTCTTCTGCATGAAGGGGCTTTCACTTaGGAGCCACATGGTCTGCCATGCCCTGCGGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: VEVGLLHEGAFT*EPHGLPCPAAT Trigger: GGTGGCCGCAGGGCATGGCAGACCATGTGGCTCCAAAGTGAAAGCCCCTTCATGCAGAAGACCGACTTCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS CAA 72 bp | GTGTACTCGGCGGGTGATGGCCACTTTGTCTCTCGGTaGAAGTCGGTCTTCTGCATGAAGGGGCTTTCACTT | + |
|
Preference number: 6 (lower is better) Translates to: VYSAGDGHFVSR*KSVFCMKGLSL Trigger: AAGTGAAAGCCCCTTCATGCAGAAGACCGACTTCAACCGAGAGACAAAGTGGCCATCACCCGCCGAGTACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS CAA 90 bp | AGCCACAGCTCTCTCAGAGTCCCTGTGCTGATAGGTGTGGACTCATaGGGGGCGCCTATTCTTAACCTGAAGCCACTTGAGGATCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SHSSLRVPVLIGVDS*GAPILNLKPLEDLF Trigger: GAAGAGATCCTCAAGTGGCTTCAGGTTAAGAATAGGCGCCCCCAATGAGTCCACACCTATCAGCACAGGGACTCTGAGAGAGCTGTGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||
| CDS CAA 72 bp | TCTCTCAGAGTCCCTGTGCTGATAGGTGTGGACTCATaGGGGGCGCCTATTCTTAACCTGAAGCCACTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SLRVPVLIGVDS*GAPILNLKPLE Trigger: CTCAAGTGGCTTCAGGTTAAGAATAGGCGCCCCCAATGAGTCCACACCTATCAGCACAGGGACTCTGAGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043774.11 ENSMUST00000114363.2 |
||