Pregenerated sensors for STPG2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047940Ensembl transcript IDs: ENSMUST00000062306.7, ENSMUST00000106239.8
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCATAGTTCTCAACAGAAAGCCCACATGTGAGCAACAAATTGACTaGGATCCAACCAGCCCTGGTGACGAACAGCACTCAGCAGAACCA | + |
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Preference number: 1 (lower is better) Translates to: SIVLNRKPTCEQQID*DPTSPGDEQHSAEP Trigger: TGGTTCTGCTGAGTGCTGTTCGTCACCAGGGCTGGTTGGATCTCAGTCAATTTGTTGCTCACATGTGGGCTTTCTGTTGAGAACTATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062306.7 |
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| 3UTR TCA 90 bp | ATGAATAGCCATCTTCCCAAACAACAGGCCATGGAAAAGGGTTTTTaGCAATTTAATTACTTTCCCTTGTTCTCCTACTTGCCCATAAAA | + |
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Preference number: 1 (lower is better) Translates to: MNSHLPKQQAMEKGF*QFNYFPLFSYLPIK Trigger: TTTTATGGGCAAGTAGGAGAACAAGGGAAAGTAATTAAATTGTCAAAAACCCTTTTCCATGGCCTGTTGTTTGGGAAGATGGCTATTCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062306.7 |
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| 3UTR TCA 90 bp | AAGCAAGTCAAAGGAACAAAGCCAAGTAGACTTACGCCAAATGGATaGTCAGTGATGCATGCAGTACTCAAAATTATAAGAGAAGATAGA | + |
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Preference number: 1 (lower is better) Translates to: KQVKGTKPSRLTPNG*SVMHAVLKIIREDR Trigger: TCTATCTTCTCTTATAATTTTGAGTACTGCATGCATCACTGATCATCCATTTGGCGTAAGTCTACTTGGCTTTGTTCCTTTGACTTGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062306.7 |
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| 3UTR-3UTR TCA 90 bp | AAATTAGCCAGGAGCGTAGCACATCCACAACATAACAGAACTTGCTTTACTTTTTGTCCTTTGAGCTGCTaGTGTAGGATGTCCCCACAA | + |
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Preference number: 2 (lower is better) Translates to: KLARSVAHPQHNRTCFTFCPLSC*CRMSPQ Trigger: TTGTGGGGACATCCTACATCAGCAGCTCAAAGGACA...AAAAGTAAAGCAAGTTCTGTTATGTTGTGGATGTGCTACGCTCCTGGCTAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062306.7 |
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| 3UTR TCA 72 bp | CTCAACAGAAAGCCCACATGTGAGCAACAAATTGACTaGGATCCAACCAGCCCTGGTGACGAACAGCACTCA | + |
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Preference number: 3 (lower is better) Translates to: LNRKPTCEQQID*DPTSPGDEQHS Trigger: TGAGTGCTGTTCGTCACCAGGGCTGGTTGGATCTCAGTCAATTTGTTGCTCACATGTGGGCTTTCTGTTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062306.7 |
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| 3UTR-3UTR CAA 90 bp | TGGGGATACAGATACCTATCTATACATAAGCAAGTCAAAGGAACAAAGCCAAGTCATGTGAGCAACAAATaGACTGAGATCCAACCAGCC | + |
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Preference number: 3 (lower is better) Translates to: WGYRYLSIHKQVKGTKPSHVSNK*TEIQPA Trigger: GGCTGGTTGGATCTCAGTCAATTTGTTGCTCACATG...ACTTGGCTTTGTTCCTTTGACTTGCTTATGTATAGATAGGTATCTGTATCCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062306.7 |
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| 3UTR-3UTR CAA 90 bp | TGGGGATACAGATACCTATCTATACATAAGCAAGTCAAAGGAACAAAGCCAAGTGTAATGTGTGCAGAATaGCCAAAACCTAACCCATAC | + |
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Preference number: 3 (lower is better) Translates to: WGYRYLSIHKQVKGTKPSVMCAE*PKPNPY Trigger: GTATGGGTTAGGTTTTGGCAATTCTGCACACATTAC...ACTTGGCTTTGTTCCTTTGACTTGCTTATGTATAGATAGGTATCTGTATCCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062306.7 |
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| 3UTR GCA 72 bp | GCCAGGAGCGTAGCACATCCACAACATAACAGAACTTaGTTTACTTTTACATGTTTTATGTTCAGAGCATCA | + |
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Preference number: 3 (lower is better) Translates to: ARSVAHPQHNRT*FTFTCFMFRAS Trigger: TGATGCTCTGAACATAAAACATGTAAAAGTAAAGCAAGTTCTGTTATGTTGTGGATGTGCTACGCTCCTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| 3UTR TCA 72 bp | AAAGGAACAAAGCCAAGTAGACTTACGCCAAATGGATaGTCAGTGATGCATGCAGTACTCAAAATTATAAGA | + |
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Preference number: 3 (lower is better) Translates to: KGTKPSRLTPNG*SVMHAVLKIIR Trigger: TCTTATAATTTTGAGTACTGCATGCATCACTGATCATCCATTTGGCGTAAGTCTACTTGGCTTTGTTCCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062306.7 |
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| CDS-3UTR GCA 90 bp | AGCCCACATGTGAGCAACAAATTGACTGAGATCCAACCAGCCCTGGTGACGAACGTCCCAGGCCCCACGTaGTCCTCGGTGCTGCCGCGG | + |
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Preference number: 4 (lower is better) Translates to: SPHVSNKLTEIQPALVTNVPGPT*SSVLPR Trigger: CCGCGGCAGCACCGAGGAGCACGTGGGGCCTGGGAC...GTTCGTCACCAGGGCTGGTTGGATCTCAGTCAATTTGTTGCTCACATGTGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062306.7 |
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| CDS-3UTR GCA 90 bp | AGAAAATTAGCCAGGAGCGTAGCACATCCACAACATAACAGAACTTGCTTTACTGTCCCAGGCCCCACGTaGTCCTCGGTGCTGCCGCGG | + |
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Preference number: 4 (lower is better) Translates to: RKLARSVAHPQHNRTCFTVPGPT*SSVLPR Trigger: CCGCGGCAGCACCGAGGAGCACGTGGGGCCTGGGAC...AGTAAAGCAAGTTCTGTTATGTTGTGGATGTGCTACGCTCCTGGCTAATTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR GCA 90 bp | CCACATGTGAGCAACAAATTGACTGAGATCCAACCAGCCCTGGTGACGAACAGCCTCGGTTTTGCAGACTaGGGCCTCCTCTTATATTAT | + |
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Preference number: 4 (lower is better) Translates to: PHVSNKLTEIQPALVTNSLGFAD*GLLLYY Trigger: ATAATATAAGAGGAGGCCGCAGTCTGCAAAACCGAG...GCTGTTCGTCACCAGGGCTGGTTGGATCTCAGTCAATTTGTTGCTCACATGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062306.7 |
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| CDS-3UTR TCA 90 bp | CCAACCAGCCCTGGTGACGAACAGCACTCAGCAGAACCAGCCTTCAGAATGGAAAGAATTCACAAGTGCTaGCATGGATTTTATCATGTC | + |
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Preference number: 4 (lower is better) Translates to: PTSPGDEQHSAEPAFRMERIHKC*HGFYHV Trigger: GACATGATAAAATCCATGTCAGCACTTGTGAATTCT...TTCCATTCTGAAGGCTGGTTCTGCTGAGTGCTGTTCGTCACCAGGGCTGGTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062306.7 |
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| CDS-3UTR CCA 90 bp | CCACATGTGAGCAACAAATTGACTGAGATCCAACCAGCCCTGGTGACGAACAGCACTCAAAGAAAGAAATaGTGCATAGCAACCTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: PHVSNKLTEIQPALVTNSTQRKK*CIATCG Trigger: GCCACAGGTTGCTATGCACCATTTCTTTCTTTGAGT...GCTGTTCGTCACCAGGGCTGGTTGGATCTCAGTCAATTTGTTGCTCACATGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062306.7 |
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| CDS-3UTR TCA 90 bp | TTCTCAACAGAAAGCCCACATGTGAGCAACAAATTGACTGAGATCCAACCAGCCTCATCGTCATTGAGATaGTACCCATGTGACTTTCCG | + |
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Preference number: 4 (lower is better) Translates to: FSTESPHVSNKLTEIQPASSSLR*YPCDFP Trigger: CGGAAAGTCACATGGGTATCATCTCAATGACGATGA...GGCTGGTTGGATCTCAGTCAATTTGTTGCTCACATGTGGGCTTTCTGTTGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062306.7 |
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| CDS-3UTR TCA 90 bp | TTCTCAACAGAAAGCCCACATGTGAGCAACAAATTGACTGAGATCCAACCAGCCATGAACACGGCAGAGTaGCATTGTATGTTCTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: FSTESPHVSNKLTEIQPAMNTAE*HCMFSS Trigger: TGAAGAGAACATACAATGTCACTCTGCCGTGTTCAT...GGCTGGTTGGATCTCAGTCAATTTGTTGCTCACATGTGGGCTTTCTGTTGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062306.7 |
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| CDS-3UTR GCA 90 bp | ACTTTTACATGTTTTATGTTCAGAGCATCAATGCACTCTCTGGTGAGAGACAGACAACCTGTGGCCTGCTaGTTAGGAAAAGGTACCTGG | + |
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Preference number: 4 (lower is better) Translates to: TFTCFMFRASMHSLVRDRQPVAC*LGKGTW Trigger: CCAGGTACCTTTTCCTAAGCAGCAGGCCACAGGTTG...TCTGTCTCTCACCAGAGAGTGCATTGATGCTCTGAACATAAAACATGTAAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR CCA 90 bp | TGGGGATACAGATACCTATCTATACATAAGCAAGTCAAAGGAACAAAGCCAAGTTACGTTGTAGTGTGCTaGACCTGGAACAGCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: WGYRYLSIHKQVKGTKPSYVVVC*TWNSLA Trigger: GGCCAAGCTGTTCCAGGTCCAGCACACTACAACGTA...ACTTGGCTTTGTTCCTTTGACTTGCTTATGTATAGATAGGTATCTGTATCCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062306.7 |
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| CDS-3UTR TCA 90 bp | GCCAGGAGCGTAGCACATCCACAACATAACAGAACTTGCTTTACTTTTACATGTCAGGACCCGAATACTTaGGAAATTCTTGTCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: ARSVAHPQHNRTCFTFTCQDPNT*EILVFL Trigger: CAGGAAGACAAGAATTTCTCAAGTATTCGGGTCCTG...ACATGTAAAAGTAAAGCAAGTTCTGTTATGTTGTGGATGTGCTACGCTCCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR GCA 90 bp | TGCTTTACTTTTACATGTTTTATGTTCAGAGCATCAATGCACTCTCTGGTGAGACAACCTGTGGCCTGCTaGTTAGGAAAAGGTACCTGG | + |
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Preference number: 4 (lower is better) Translates to: CFTFTCFMFRASMHSLVRQPVAC*LGKGTW Trigger: CCAGGTACCTTTTCCTAAGCAGCAGGCCACAGGTTG...TCTCACCAGAGAGTGCATTGATGCTCTGAACATAAAACATGTAAAAGTAAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR TCA 90 bp | TTCTCAACAGAAAGCCCACATGTGAGCAACAAATTGACTGAGATCCAACCAGCCTTTTCTGTCTGGTTGTaGTACATAATGTCCCAAGAT | + |
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Preference number: 4 (lower is better) Translates to: FSTESPHVSNKLTEIQPAFSVWL*YIMSQD Trigger: ATCTTGGGACATTATGTATCACAACCAGACAGAAAA...GGCTGGTTGGATCTCAGTCAATTTGTTGCTCACATGTGGGCTTTCTGTTGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062306.7 |
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| CDS-3UTR TCA 90 bp | GCCAGGAGCGTAGCACATCCACAACATAACAGAACTTGCTTTACTTTTACATGTTCCGGAAGAGGGGATTaGAGGAATATCAATGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: ARSVAHPQHNRTCFTFTCSGRGD*RNINVS Trigger: AGAAACATTGATATTCCTTCAATCCCCTCTTCCGGA...ACATGTAAAAGTAAAGCAAGTTCTGTTATGTTGTGGATGTGCTACGCTCCTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR TCA 90 bp | AGCATAAGAAAATTAGCCAGGAGCGTAGCACATCCACAACATAACAGAACTTGCGTTTCCTTTTCTGGATaGTATCATACTGTCCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: SIRKLARSVAHPQHNRTCVSFSG*YHTVQD Trigger: GTCCTGGACAGTATGATATCATCCAGAAAAGGAAAC...GCAAGTTCTGTTATGTTGTGGATGTGCTACGCTCCTGGCTAATTTTCTTATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR TCA 90 bp | GCCAGGAGCGTAGCACATCCACAACATAACAGAACTTGCTTTACTTTTACATGTGTTTCCTTTTCTGGATaGTATCATACTGTCCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: ARSVAHPQHNRTCFTFTCVSFSG*YHTVQD Trigger: GTCCTGGACAGTATGATATCATCCAGAAAAGGAAAC...ACATGTAAAAGTAAAGCAAGTTCTGTTATGTTGTGGATGTGCTACGCTCCTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR GCA 90 bp | TCTATACATAAGCAAGTCAAAGGAACAAAGCCAAGTAGACTTACGCCAAATGGAGTATTTCATTGTATGTaGCAGGAGCTGGGGTGCATG | + |
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Preference number: 4 (lower is better) Translates to: SIHKQVKGTKPSRLTPNGVFHCM*QELGCM Trigger: CATGCACCCCAGCTCCTGGCACATACAATGAAATAC...TCCATTTGGCGTAAGTCTACTTGGCTTTGTTCCTTTGACTTGCTTATGTATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062306.7 |
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| CDS-3UTR CCA 90 bp | AGCATAAGAAAATTAGCCAGGAGCGTAGCACATCCACAACATAACAGAACTTGCACTCAAAGAAAGAAATaGTGCATAGCAACCTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: SIRKLARSVAHPQHNRTCTQRKK*CIATCG Trigger: GCCACAGGTTGCTATGCACCATTTCTTTCTTTGAGT...GCAAGTTCTGTTATGTTGTGGATGTGCTACGCTCCTGGCTAATTTTCTTATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR GCA 90 bp | TTGCTTTACTTTTACATGTTTTATGTTCAGAGCATCAATGCACTCTCTGGTGAGGTATTTCATTGTATGTaGCAGGAGCTGGGGTGCATG | + |
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Preference number: 4 (lower is better) Translates to: LLYFYMFYVQSINALSGEVFHCM*QELGCM Trigger: CATGCACCCCAGCTCCTGGCACATACAATGAAATAC...CTCACCAGAGAGTGCATTGATGCTCTGAACATAAAACATGTAAAAGTAAAGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR TCA 90 bp | AAATTAGCCAGGAGCGTAGCACATCCACAACATAACAGAACTTGCTTTACTTTTAGGAGCTGGGGTGCATaGTTTTATAGGTTCAAATCT | + |
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Preference number: 4 (lower is better) Translates to: KLARSVAHPQHNRTCFTFRSWGA*FYRFKS Trigger: AGATTTGAACCTATAAAATCATGCACCCCAGCTCCT...AAAAGTAAAGCAAGTTCTGTTATGTTGTGGATGTGCTACGCTCCTGGCTAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR CCA 90 bp | AAACAGAGCATAAGAAAATTAGCCAGGAGCGTAGCACATCCACAACATAACAGATCCAAATCTTTTCTTTaGGCACTTGAAAGCAGTTCG | + |
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Preference number: 4 (lower is better) Translates to: KQSIRKLARSVAHPQHNRSKSFL*ALESSS Trigger: CGAACTGCTTTCAAGTGCCCAAAGAAAAGATTTGGA...TCTGTTATGTTGTGGATGTGCTACGCTCCTGGCTAATTTTCTTATGCTCTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR CCA 90 bp | TGGGGATACAGATACCTATCTATACATAAGCAAGTCAAAGGAACAAAGCCAAGTAATCGAGCAGCACTCTaGTTAAATGGCAAAGACAGT | + |
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Preference number: 4 (lower is better) Translates to: WGYRYLSIHKQVKGTKPSNRAAL*LNGKDS Trigger: ACTGTCTTTGCCATTTAACCAGAGTGCTGCTCGATT...ACTTGGCTTTGTTCCTTTGACTTGCTTATGTATAGATAGGTATCTGTATCCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062306.7 |
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| CDS-3UTR TCA 90 bp | TGCTTTACTTTTACATGTTTTATGTTCAGAGCATCAATGCACTCTCTGGTGAGATCCGGAAGAGGGGATTaGAGGAATATCAATGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: CFTFTCFMFRASMHSLVRSGRGD*RNINVS Trigger: AGAAACATTGATATTCCTTCAATCCCCTCTTCCGGA...TCTCACCAGAGAGTGCATTGATGCTCTGAACATAAAACATGTAAAAGTAAAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR TCA 90 bp | AGGAGCGTAGCACATCCACAACATAACAGAACTTGCTTTACTTTTACATGTTTTAGGAGCTGGGGTGCATaGTTTTATAGGTTCAAATCT | + |
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Preference number: 4 (lower is better) Translates to: RSVAHPQHNRTCFTFTCFRSWGA*FYRFKS Trigger: AGATTTGAACCTATAAAATCATGCACCCCAGCTCCT...AAAACATGTAAAAGTAAAGCAAGTTCTGTTATGTTGTGGATGTGCTACGCTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR TCA 90 bp | TTTACTTTTACATGTTTTATGTTCAGAGCATCAATGCACTCTCTGGTGAGAGACATGAACACGGCAGAGTaGCATTGTATGTTCTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: FTFTCFMFRASMHSLVRDMNTAE*HCMFSS Trigger: TGAAGAGAACATACAATGTCACTCTGCCGTGTTCAT...GTCTCTCACCAGAGAGTGCATTGATGCTCTGAACATAAAACATGTAAAAGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR CCA 90 bp | AGCATAAGAAAATTAGCCAGGAGCGTAGCACATCCACAACATAACAGAACTTGCCACAAGCACTTGTTTTaGAACTCAAAGAAAGAAATG | + |
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Preference number: 4 (lower is better) Translates to: SIRKLARSVAHPQHNRTCHKHLF*NSKKEM Trigger: CATTTCTTTCTTTGAGTTCCAAAACAAGTGCTTGTG...GCAAGTTCTGTTATGTTGTGGATGTGCTACGCTCCTGGCTAATTTTCTTATGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR CCA 90 bp | AAATTAGCCAGGAGCGTAGCACATCCACAACATAACAGAACTTGCTTTACTTTTTCCAAATCTTTTCTTTaGGCACTTGAAAGCAGTTCG | + |
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Preference number: 4 (lower is better) Translates to: KLARSVAHPQHNRTCFTFSKSFL*ALESSS Trigger: CGAACTGCTTTCAAGTGCCCAAAGAAAAGATTTGGA...AAAAGTAAAGCAAGTTCTGTTATGTTGTGGATGTGCTACGCTCCTGGCTAATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR CCA 90 bp | AGGAGCGTAGCACATCCACAACATAACAGAACTTGCTTTACTTTTACATGTTTTAATCGAGCAGCACTCTaGTTAAATGGCAAAGACAGT | + |
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Preference number: 4 (lower is better) Translates to: RSVAHPQHNRTCFTFTCFNRAAL*LNGKDS Trigger: ACTGTCTTTGCCATTTAACCAGAGTGCTGCTCGATT...AAAACATGTAAAAGTAAAGCAAGTTCTGTTATGTTGTGGATGTGCTACGCTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR CCA 90 bp | GCCAGGAGCGTAGCACATCCACAACATAACAGAACTTGCTTTACTTTTACATGTGGGCTTTTACAATGTTaGTTGAGATATCATAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: ARSVAHPQHNRTCFTFTCGLLQC*LRYHKS Trigger: GCTTTTATGATATCTCAACCAACATTGTAAAAGCCC...ACATGTAAAAGTAAAGCAAGTTCTGTTATGTTGTGGATGTGCTACGCTCCTGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR TCA 90 bp | TGCTTTACTTTTACATGTTTTATGTTCAGAGCATCAATGCACTCTCTGGTGAGATTTTCTGTCTGGTTGTaGTACATAATGTCCCAAGAT | + |
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Preference number: 4 (lower is better) Translates to: CFTFTCFMFRASMHSLVRFSVWL*YIMSQD Trigger: ATCTTGGGACATTATGTATCACAACCAGACAGAAAA...TCTCACCAGAGAGTGCATTGATGCTCTGAACATAAAACATGTAAAAGTAAAGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR TCA 90 bp | AGGAGCGTAGCACATCCACAACATAACAGAACTTGCTTTACTTTTACATGTTTTAGAATTCACAAGTGCTaGCATGGATTTTATCATGTC | + |
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Preference number: 4 (lower is better) Translates to: RSVAHPQHNRTCFTFTCFRIHKC*HGFYHV Trigger: GACATGATAAAATCCATGTCAGCACTTGTGAATTCT...AAAACATGTAAAAGTAAAGCAAGTTCTGTTATGTTGTGGATGTGCTACGCTCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR CCA 90 bp | ACTTTTACATGTTTTATGTTCAGAGCATCAATGCACTCTCTGGTGAGAGACAGAGGGCTTTTACAATGTTaGTTGAGATATCATAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: TFTCFMFRASMHSLVRDRGLLQC*LRYHKS Trigger: GCTTTTATGATATCTCAACCAACATTGTAAAAGCCC...TCTGTCTCTCACCAGAGAGTGCATTGATGCTCTGAACATAAAACATGTAAAAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR CCA 90 bp | AGCGTAGCACATCCACAACATAACAGAACTTGCTTTACTTTTACATGTTTTATGCACAAGCACTTGTTTTaGAACTCAAAGAAAGAAATG | + |
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Preference number: 4 (lower is better) Translates to: SVAHPQHNRTCFTFTCFMHKHLF*NSKKEM Trigger: CATTTCTTTCTTTGAGTTCCAAAACAAGTGCTTGTG...CATAAAACATGTAAAAGTAAAGCAAGTTCTGTTATGTTGTGGATGTGCTACGCT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS GCA 90 bp | GAAAAGGTACCTGGTAGGTCCCAGGCCCCACGTGCTCCTCGGTGCTaGCGCGGTTGGCACAGTCGAGCCAGCGCGGAGCACGGTCATACA | + |
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Preference number: 5 (lower is better) Translates to: EKVPGRSQAPRAPRC*RGWHSRASAEHGHT Trigger: TGTATGACCGTGCTCCGCGCTGGCTCGACTGTGCCAACCGCGGCAGCACCGAGGAGCACGTGGGGCCTGGGACCTACCAGGTACCTTTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR CAA 90 bp | AGCCCACATGTGAGCAACAAATTGACTGAGATCCAACCAGCCCTGGTGACGAACGCTGGACCTATTGTGTaGTCACTAGGAGGTGGGGTG | + |
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Preference number: 5 (lower is better) Translates to: SPHVSNKLTEIQPALVTNAGPIV*SLGGGV Trigger: CACCCCACCTCCTAGTGACAACACAATAGGTCCAGC...GTTCGTCACCAGGGCTGGTTGGATCTCAGTCAATTTGTTGCTCACATGTGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062306.7 |
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| CDS TCA 90 bp | TCGGTTTTGCAGACTGCGGCCTCCTCTTATATTATACTGTGCTTGTaGTACGTTGTAGTGTGCTGGACCTGGAACAGCTTGGCCAGCATC | + |
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Preference number: 5 (lower is better) Translates to: SVLQTAASSYIILCL*YVVVCWTWNSLASI Trigger: GATGCTGGCCAAGCTGTTCCAGGTCCAGCACACTACAACGTATCACAAGCACAGTATAATATAAGAGGAGGCCGCAGTCTGCAAAACCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR CAA 90 bp | TTCTCAACAGAAAGCCCACATGTGAGCAACAAATTGACTGAGATCCAACCAGCCGCAGTTCGTATTTCATaGTATGTGCCAGGAGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: FSTESPHVSNKLTEIQPAAVRIS*YVPGAG Trigger: CCCAGCTCCTGGCACATACAATGAAATACGAACTGC...GGCTGGTTGGATCTCAGTCAATTTGTTGCTCACATGTGGGCTTTCTGTTGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062306.7 |
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| CDS-3UTR CAA 90 bp | TCTATACATAAGCAAGTCAAAGGAACAAAGCCAAGTAGACTTACGCCAAATGGATGGACCTGGAACAGCTaGGCCAGCATCAGAGGAGAC | + |
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Preference number: 5 (lower is better) Translates to: SIHKQVKGTKPSRLTPNGWTWNS*ASIRGD Trigger: GTCTCCTCTGATGCTGGCCAAGCTGTTCCAGGTCCA...TCCATTTGGCGTAAGTCTACTTGGCTTTGTTCCTTTGACTTGCTTATGTATAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062306.7 |
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| CDS-3UTR CAA 90 bp | TTGCTTTACTTTTACATGTTTTATGTTCAGAGCATCAATGCACTCTCTGGTGAGTGGACCTGGAACAGCTaGGCCAGCATCAGAGGAGAC | + |
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Preference number: 5 (lower is better) Translates to: LLYFYMFYVQSINALSGEWTWNS*ASIRGD Trigger: GTCTCCTCTGATGCTGGCCAAGCTGTTCCAGGTCCA...CTCACCAGAGAGTGCATTGATGCTCTGAACATAAAACATGTAAAAGTAAAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR CAA 90 bp | ACTTTTACATGTTTTATGTTCAGAGCATCAATGCACTCTCTGGTGAGAGACAGAGCTGGACCTATTGTGTaGTCACTAGGAGGTGGGGTG | + |
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Preference number: 5 (lower is better) Translates to: TFTCFMFRASMHSLVRDRAGPIV*SLGGGV Trigger: CACCCCACCTCCTAGTGACAACACAATAGGTCCAGC...TCTGTCTCTCACCAGAGAGTGCATTGATGCTCTGAACATAAAACATGTAAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR CAA 90 bp | AGCATAAGAAAATTAGCCAGGAGCGTAGCACATCCACAACATAACAGAACTTGCGCAGTTCGTATTTCATaGTATGTGCCAGGAGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: SIRKLARSVAHPQHNRTCAVRIS*YVPGAG Trigger: CCCAGCTCCTGGCACATACAATGAAATACGAACTGC...GCAAGTTCTGTTATGTTGTGGATGTGCTACGCTCCTGGCTAATTTTCTTATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR CAA 90 bp | TTCTCAACAGAAAGCCCACATGTGAGCAACAAATTGACTGAGATCCAACCAGCCCTCGCCATGAAACTCTaGAAAACGCTTTGGTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: FSTESPHVSNKLTEIQPALAMKL*KTLWSF Trigger: AAAGGACCAAAGCGTTTTCAAGAGTTTCATGGCGAG...GGCTGGTTGGATCTCAGTCAATTTGTTGCTCACATGTGGGCTTTCTGTTGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062306.7 |
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| CDS-3UTR CAA 90 bp | AGCATAAGAAAATTAGCCAGGAGCGTAGCACATCCACAACATAACAGAACTTGCCCAGGACCCGAATACTaGAGAAATTCTTGTCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: SIRKLARSVAHPQHNRTCPGPEY*RNSCLP Trigger: AGGAAGACAAGAATTTCTCAAGTATTCGGGTCCTGG...GCAAGTTCTGTTATGTTGTGGATGTGCTACGCTCCTGGCTAATTTTCTTATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR CAA 90 bp | AAATTAGCCAGGAGCGTAGCACATCCACAACATAACAGAACTTGCTTTACTTTTTTCCGGAAGAGGGGATaGAAGGAATATCAATGTTTC | + |
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Preference number: 5 (lower is better) Translates to: KLARSVAHPQHNRTCFTFFRKRG*KEYQCF Trigger: GAAACATTGATATTCCTTCAATCCCCTCTTCCGGAA...AAAAGTAAAGCAAGTTCTGTTATGTTGTGGATGTGCTACGCTCCTGGCTAATTT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR CAA 90 bp | AGGAGCGTAGCACATCCACAACATAACAGAACTTGCTTTACTTTTACATGTTTTCCAGGACCCGAATACTaGAGAAATTCTTGTCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: RSVAHPQHNRTCFTFTCFPGPEY*RNSCLP Trigger: AGGAAGACAAGAATTTCTCAAGTATTCGGGTCCTGG...AAAACATGTAAAAGTAAAGCAAGTTCTGTTATGTTGTGGATGTGCTACGCTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR CAA 90 bp | AGAAAATTAGCCAGGAGCGTAGCACATCCACAACATAACAGAACTTGCTTTACTCTTTTCTTTGGGCACTaGAAAGCAGTTCGTATTTCA | + |
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Preference number: 5 (lower is better) Translates to: RKLARSVAHPQHNRTCFTLFFGH*KAVRIS Trigger: TGAAATACGAACTGCTTTCAAGTGCCCAAAGAAAAG...AGTAAAGCAAGTTCTGTTATGTTGTGGATGTGCTACGCTCCTGGCTAATTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR CAA 90 bp | TGCTTTACTTTTACATGTTTTATGTTCAGAGCATCAATGCACTCTCTGGTGAGACTCGCCATGAAACTCTaGAAAACGCTTTGGTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: CFTFTCFMFRASMHSLVRLAMKL*KTLWSF Trigger: AAAGGACCAAAGCGTTTTCAAGAGTTTCATGGCGAG...TCTCACCAGAGAGTGCATTGATGCTCTGAACATAAAACATGTAAAAGTAAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR CAA 90 bp | TGGGGATACAGATACCTATCTATACATAAGCAAGTCAAAGGAACAAAGCCAAGTAGACAACACAAGCACTaGTTTTGGAACTCAAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: WGYRYLSIHKQVKGTKPSRQHKH*FWNSKK Trigger: TTTCTTTGAGTTCCAAAACAAGTGCTTGTGTTGTCT...ACTTGGCTTTGTTCCTTTGACTTGCTTATGTATAGATAGGTATCTGTATCCCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062306.7 |
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| CDS-3UTR CAA 90 bp | AAATTAGCCAGGAGCGTAGCACATCCACAACATAACAGAACTTGCTTTACTTTTAGACAACACAAGCACTaGTTTTGGAACTCAAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: KLARSVAHPQHNRTCFTFRQHKH*FWNSKK Trigger: TTTCTTTGAGTTCCAAAACAAGTGCTTGTGTTGTCT...AAAAGTAAAGCAAGTTCTGTTATGTTGTGGATGTGCTACGCTCCTGGCTAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR CAA 90 bp | TTGCTTTACTTTTACATGTTTTATGTTCAGAGCATCAATGCACTCTCTGGTGAGATACTTGAGAAATTCTaGTCTTCCTGTAGCATTGCC | + |
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Preference number: 5 (lower is better) Translates to: LLYFYMFYVQSINALSGEILEKF*SSCSIA Trigger: GGCAATGCTACAGGAAGACAAGAATTTCTCAAGTAT...CTCACCAGAGAGTGCATTGATGCTCTGAACATAAAACATGTAAAAGTAAAGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR CAA 90 bp | AGGAGCGTAGCACATCCACAACATAACAGAACTTGCTTTACTTTTACATGTTTTATACTTGAGAAATTCTaGTCTTCCTGTAGCATTGCC | + |
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Preference number: 5 (lower is better) Translates to: RSVAHPQHNRTCFTFTCFILEKF*SSCSIA Trigger: GGCAATGCTACAGGAAGACAAGAATTTCTCAAGTAT...AAAACATGTAAAAGTAAAGCAAGTTCTGTTATGTTGTGGATGTGCTACGCTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS-3UTR CAA 90 bp | TTGCTTTACTTTTACATGTTTTATGTTCAGAGCATCAATGCACTCTCTGGTGAGCTTTTCTTTGGGCACTaGAAAGCAGTTCGTATTTCA | + |
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Preference number: 5 (lower is better) Translates to: LLYFYMFYVQSINALSGELFFGH*KAVRIS Trigger: TGAAATACGAACTGCTTTCAAGTGCCCAAAGAAAAG...CTCACCAGAGAGTGCATTGATGCTCTGAACATAAAACATGTAAAAGTAAAGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS GCA 90 bp | TCTTCCTGTAGCATTGCCAAAATTTACGCCTTTATATTTCAAAGATaGTTTAGGATAATCAAACTGAGGATTGTAGTACGCTGGACCTAT | + |
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Preference number: 5 (lower is better) Translates to: SSCSIAKIYAFIFQR*FRIIKLRIVVRWTY Trigger: ATAGGTCCAGCGTACTACAATCCTCAGTTTGATTATCCTAAAGCATCTTTGAAATATAAAGGCGTAAATTTTGGCAATGCTACAGGAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS GCA 72 bp | CCTGGTAGGTCCCAGGCCCCACGTGCTCCTCGGTGCTaGCGCGGTTGGCACAGTCGAGCCAGCGCGGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: PGRSQAPRAPRC*RGWHSRASAEH Trigger: GTGCTCCGCGCTGGCTCGACTGTGCCAACCGCGGCAGCACCGAGGAGCACGTGGGGCCTGGGACCTACCAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS GCA 72 bp | GTACCTGGTAGGTCCCAGGCCCCACGTGCTCCTCGGTaGTGCCGCGGTTGGCACAGTCGAGCCAGCGCGGAG | + |
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Preference number: 6 (lower is better) Translates to: VPGRSQAPRAPR*CRGWHSRASAE Trigger: CTCCGCGCTGGCTCGACTGTGCCAACCGCGGCAGCACCGAGGAGCACGTGGGGCCTGGGACCTACCAGGTAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS CAA 72 bp | GTCCCAGGCCCCACGTGCTCCTCGGTGCTGCCGCGGTaGGCACAGTCGAGCCAGCGCGGAGCACGGTCATAC | + |
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Preference number: 6 (lower is better) Translates to: VPGPTCSSVLPR*AQSSQRGARSY Trigger: GTATGACCGTGCTCCGCGCTGGCTCGACTGTGCCAACCGCGGCAGCACCGAGGAGCACGTGGGGCCTGGGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS CCA 72 bp | TCCCAGGCCCCACGTGCTCCTCGGTGCTGCCGCGGTTaGCACAGTCGAGCCAGCGCGGAGCACGGTCATACA | + |
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Preference number: 6 (lower is better) Translates to: SQAPRAPRCCRG*HSRASAEHGHT Trigger: TGTATGACCGTGCTCCGCGCTGGCTCGACTGTGCCAACCGCGGCAGCACCGAGGAGCACGTGGGGCCTGGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS TCA 72 bp | CAGACTGCGGCCTCCTCTTATATTATACTGTGCTTGTaGTACGTTGTAGTGTGCTGGACCTGGAACAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: QTAASSYIILCL*YVVVCWTWNSL Trigger: CAAGCTGTTCCAGGTCCAGCACACTACAACGTATCACAAGCACAGTATAATATAAGAGGAGGCCGCAGTCTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS CAA 72 bp | TTATGGCACCAGACTTCATTAAAACAGGACTGTATGTaGCAGGTCCTGGCCCATCAGCGATTTTTCCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: LWHQTSLKQDCM*QVLAHQRFFPG Trigger: GCCTGGGAAAAATCGCTGATGGGCCAGGACCTGCAACATACAGTCCTGTTTTAATGAAGTCTGGTGCCATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS CAA 90 bp | GACCTGGAACAGCTTGGCCAGCATCAGAGGAGACAACACAAGCACTaGTTTTGGAACTCAAAGAAAGAAATGGTGCATAGCAACCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: DLEQLGQHQRRQHKH*FWNSKKEMVHSNLW Trigger: CCACAGGTTGCTATGCACCATTTCTTTCTTTGAGTTCCAAAACAAGTGCTTGTGTTGTCTCCTCTGATGCTGGCCAAGCTGTTCCAGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS CAA 90 bp | CTCTGGTTAAATGGCAAAGACAGTCCAAATCTTTTCTTTGGGCACTaGAAAGCAGTTCGTATTTCATTGTATGTGCCAGGAGCTGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: LWLNGKDSPNLFFGH*KAVRISLYVPGAGV Trigger: CACCCCAGCTCCTGGCACATACAATGAAATACGAACTGCTTTCAAGTGCCCAAAGAAAAGATTTGGACTGTCTTTGCCATTTAACCAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS CCA 72 bp | GGAATCTTCTGTGAATCGAGCAGCACTCTGGTTAAATaGCAAAGACAGTCCAAATCTTTTCTTTGGGCACTT | + |
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Preference number: 6 (lower is better) Translates to: GIFCESSSTLVK*QRQSKSFLWAL Trigger: AAGTGCCCAAAGAAAAGATTTGGACTGTCTTTGCCATTTAACCAGAGTGCTGCTCGATTCACAGAAGATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS CAA 72 bp | CACCGAAGTACGAGGTGGCATGTACTTATGTTTAACTaGGGACATGTCATACGATTTCTGAACATCATAGCG | + |
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Preference number: 6 (lower is better) Translates to: HRSTRWHVLMFN*GHVIRFLNIIA Trigger: CGCTATGATGTTCAGAAATCGTATGACATGTCCCAAGTTAAACATAAGTACATGCCACCTCGTACTTCGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS TCA 72 bp | ATGGCAAAGACAGTCCAAATCTTTTCTTTGGGCACTTaGAAGCAGTTCGTATTTCATTGTATGTGCCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: MAKTVQIFSLGT*KQFVFHCMCQE Trigger: CTCCTGGCACATACAATGAAATACGAACTGCTTTCAAGTGCCCAAAGAAAAGATTTGGACTGTCTTTGCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS CCA 72 bp | TGTGCCTTGGAATCTTCTGTGAATCGAGCAGCACTCTaGTTAAATGGCAAAGACAGTCCAAATCTTTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: CALESSVNRAAL*LNGKDSPNLFF Trigger: AAAGAAAAGATTTGGACTGTCTTTGCCATTTAACCAGAGTGCTGCTCGATTCACAGAAGATTCCAAGGCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS CAA 72 bp | AATGGCAAAGACAGTCCAAATCTTTTCTTTGGGCACTaGAAAGCAGTTCGTATTTCATTGTATGTGCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: NGKDSPNLFFGH*KAVRISLYVPG Trigger: TCCTGGCACATACAATGAAATACGAACTGCTTTCAAGTGCCCAAAGAAAAGATTTGGACTGTCTTTGCCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS CAA 90 bp | GATATCATACTGTCCAGGACCAGGACCCGAATACTTGAGAAATTCTaGTCTTCCTGTAGCATTGCCAAAATTTACGCCTTTATATTTCAA | + |
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Preference number: 6 (lower is better) Translates to: DIILSRTRTRILEKF*SSCSIAKIYAFIFQ Trigger: TTGAAATATAAAGGCGTAAATTTTGGCAATGCTACAGGAAGACAAGAATTTCTCAAGTATTCGGGTCCTGGTCCTGGACAGTATGATATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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| CDS CCA 72 bp | CTGGTTAAATGGCAAAGACAGTCCAAATCTTTTCTTTaGGCACTTGAAAGCAGTTCGTATTTCATTGTATGT | + |
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Preference number: 6 (lower is better) Translates to: LVKWQRQSKSFL*ALESSSYFIVC Trigger: ACATACAATGAAATACGAACTGCTTTCAAGTGCCCAAAGAAAAGATTTGGACTGTCTTTGCCATTTAACCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062306.7 ENSMUST00000106239.8 |
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