Pregenerated sensors for STPG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028801Ensembl transcript IDs: ENSMUST00000063707.3
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTGAGGGCAGAGGTGCCTCTGCTGCAGGCACCTCTGAGCCTTCCTaGCACCCAGAAGACAAGGACAATCTGGAGGACAGGGCCTCGGCA | + |
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Preference number: 1 (lower is better) Translates to: AEGRGASAAGTSEPS*HPEDKDNLEDRASA Trigger: TGCCGAGGCCCTGTCCTCCAGATTGTCCTTGTCTTCTGGGTGGCAGGAAGGCTCAGAGGTGCCTGCAGCAGAGGCACCTCTGCCCTCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| 3UTR TCA 90 bp | GGTGACAGAGACCGGGCAGAGGCAAGTGACTGGGAAGTGAGAACATaGAGGCAGGGGACCCATAAGTCCTCCATGCCCTGGGGACAGTGG | + |
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Preference number: 1 (lower is better) Translates to: GDRDRAEASDWEVRT*RQGTHKSSMPWGQW Trigger: CCACTGTCCCCAGGGCATGGAGGACTTATGGGTCCCCTGCCTTCATGTTCTCACTTCCCAGTCACTTGCCTCTGCCCGGTCTCTGTCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| 3UTR TCA 90 bp | GGCAGGAAGGTGACAGAGACCGGGCAGAGGCAAGTGACTGGGAAGTaGGAACATGAAGGCAGGGGACCCATAAGTCCTCCATGCCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: GRKVTETGQRQVTGK*EHEGRGPISPPCPG Trigger: CCCAGGGCATGGAGGACTTATGGGTCCCCTGCCTTCATGTTCTCACTTCCCAGTCACTTGCCTCTGCCCGGTCTCTGTCACCTTCCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| 3UTR TCA 90 bp | GTCCTGATCTCTGGGAAGGAGAATCATCAGAACCAGCTTAGAGGCTaGCACAGAGGTAGCCAGAGAGCTCTGCTGGGGTGGGTGAGGGGG | + |
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Preference number: 1 (lower is better) Translates to: VLISGKENHQNQLRG*HRGSQRALLGWVRG Trigger: CCCCCTCACCCACCCCAGCAGAGCTCTCTGGCTACCTCTGTGTCAGCCTCTAAGCTGGTTCTGATGATTCTCCTTCCCAGAGATCAGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| 3UTR TCA 90 bp | GCAGGAGACTGGGGCTCCACATTAGAGTCAGTGCTCCAAAAGTCCTaGTCTCTGGGAAGGAGAATCATCAGAACCAGCTTAGAGGCTGAC | + |
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Preference number: 1 (lower is better) Translates to: AGDWGSTLESVLQKS*SLGRRIIRTSLEAD Trigger: GTCAGCCTCTAAGCTGGTTCTGATGATTCTCCTTCCCAGAGATCAGGACTTTTGGAGCACTGACTCTAATGTGGAGCCCCAGTCTCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| 3UTR-3UTR TCA 90 bp | AGAACCAGCTTAGAGGCTGACACAGAGGTAGCCAGAGAGCTCTGCTGGGGTGGGGCTCCAGACAGTATGTaGCCCTGGGCTGGGTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: RTSLEADTEVARELCWGGAPDSM*PWAGCS Trigger: AGAACACCCAGCCCAGGGTCACATACTGTCTGGAGC...CCCACCCCAGCAGAGCTCTCTGGCTACCTCTGTGTCAGCCTCTAAGCTGGTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| 3UTR CAA 90 bp | CAGACAGTATGTGACCCTGGGCTGGGTGTTCTGTTGATAGATGTCTaGAGGAGCAGGGTCAGGGGGTCTGGCGAGCTGAGCCTCTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: QTVCDPGLGVLLIDV*RSRVRGSGELSLSL Trigger: GAGAGAGAGGCTCAGCTCGCCAGACCCCCTGACCCTGCTCCTCAAGACATCTATCAACAGAACACCCAGCCCAGGGTCACATACTGTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| 3UTR CAA 90 bp | AGAAGGCAGCTCCAGACAGTATGTGACCCTGGGCTGGGTGTTCTGTaGATAGATGTCTTGAGGAGCAGGGTCAGGGGGTCTGGCGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: RRQLQTVCDPGLGVL*IDVLRSRVRGSGEL Trigger: CAGCTCGCCAGACCCCCTGACCCTGCTCCTCAAGACATCTATCAACAGAACACCCAGCCCAGGGTCACATACTGTCTGGAGCTGCCTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| 3UTR-3UTR TCA 90 bp | CAGAGGAGGGAAGGGGAGGCTATGAGGATGTCATTTAGGAAAGTGACAGACATTGGGGGTCTGGCGAGCTaGGCCTCTCTCTCCCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: QRREGEAMRMSFRKVTDIGGLAS*ASLSLC Trigger: GCAGAGGGAGAGAGAGGCTCAGCTCGCCAGACCCCC...AATGTCTGTCACTTTCCTAAATGACATCCTCATAGCCTCCCCTTCCCTCCTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| 3UTR-3UTR TCA 90 bp | AAGCCCAGGAGGCAGAGTTCTCAGAAAATGTCAAGGAAGGGGCCTTGGGAGGAGAACCAGCTTAGAGGCTaGCACAGAGGTAGCCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: KPRRQSSQKMSRKGPWEENQLRG*HRGSQR Trigger: TCTCTGGCTACCTCTGTGTCAGCCTCTAAGCTGGTT...CTCCTCCCAAGGCCCCTTCCTTGACATTTTCTGAGAACTCTGCCTCCTGGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| 3UTR CAA 90 bp | GGAGATGAGAGAAGCAGGAAGGGAAGGCACATTTCATCTTCGTTCTaGGTCAGATCTCCCACAAGCCATGATCTCTCAGGGACACCGTCC | + |
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Preference number: 2 (lower is better) Translates to: GDERSRKGRHISSSF*VRSPTSHDLSGTPS Trigger: GGACGGTGTCCCTGAGAGATCATGGCTTGTGGGAGATCTGACCAAGAACGAAGATGAAATGTGCCTTCCCTTCCTGCTTCTCTCATCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| 3UTR-3UTR TCA 90 bp | CAGAGGAGGGAAGGGGAGGCTATGAGGATGTCATTTAGGAAAGTGACAGACATTCCGGGCAGAGGCAAGTaGCTGGGAAGTGAGAACATG | + |
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Preference number: 2 (lower is better) Translates to: QRREGEAMRMSFRKVTDIPGRGK*LGSENM Trigger: CATGTTCTCACTTCCCAGTCACTTGCCTCTGCCCGG...AATGTCTGTCACTTTCCTAAATGACATCCTCATAGCCTCCCCTTCCCTCCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| 3UTR-3UTR TCA 90 bp | AGATGGGAAGCCCAGGAGGCAGAGTTCTCAGAAAATGTCAAGGAAGGGGCCTTGGGGAAGGGGAGGCTATaGGGATGTCATTTAGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: RWEAQEAEFSENVKEGALGKGRL*GCHLGK Trigger: CTTTCCTAAATGACATCCTCATAGCCTCCCCTTCCC...CAAGGCCCCTTCCTTGACATTTTCTGAGAACTCTGCCTCCTGGGCTTCCCATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| 3UTR-3UTR TCA 90 bp | GGCCTTGGGAGGAGAGAAGCCCAGGCAGGTGTTTTGGAAGGCAATCAGGGGCCATGTCATTTAGGAAAGTaGCAGACATTATCAGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: GLGRREAQAGVLEGNQGPCHLGK*QTLSVS Trigger: AGACACTGATAATGTCTGTCACTTTCCTAAATGACA...TGGCCCCTGATTGCCTTCCAAAACACCTGCCTGGGCTTCTCTCCTCCCAAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| 3UTR TCA 72 bp | GACCGGGCAGAGGCAAGTGACTGGGAAGTGAGAACATaGAGGCAGGGGACCCATAAGTCCTCCATGCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: DRAEASDWEVRT*RQGTHKSSMPW Trigger: CCAGGGCATGGAGGACTTATGGGTCCCCTGCCTTCATGTTCTCACTTCCCAGTCACTTGCCTCTGCCCGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| 3UTR CCA 72 bp | GTTGATAGATGTCTTGAGGAGCAGGGTCAGGGGGTCTaGCGAGCTGAGCCTCTCTCTCCCTCTGCTCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: VDRCLEEQGQGV*RAEPLSPSAPV Trigger: CACAGGAGCAGAGGGAGAGAGAGGCTCAGCTCGCCAGACCCCCTGACCCTGCTCCTCAAGACATCTATCAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| 3UTR-3UTR CAA 90 bp | AGAACCAGCTTAGAGGCTGACACAGAGGTAGCCAGAGAGCTCTGCTGGGGTGGGCTGTTGATAGATGTCTaGAGGAGCAGGGTCAGGGGG | + |
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Preference number: 3 (lower is better) Translates to: RTSLEADTEVARELCWGGLLIDV*RSRVRG Trigger: CCCCCTGACCCTGCTCCTCAAGACATCTATCAACAG...CCCACCCCAGCAGAGCTCTCTGGCTACCTCTGTGTCAGCCTCTAAGCTGGTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| 3UTR CCA 72 bp | CCCCAGGAAGAGAGCCAGTCAGGCAGCCAGTCCAGATaGGAAGCCCAGGAGGCAGAGTTCTCAGAAAATGTC | + |
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Preference number: 3 (lower is better) Translates to: PQEESQSGSQSR*EAQEAEFSENV Trigger: GACATTTTCTGAGAACTCTGCCTCCTGGGCTTCCCATCTGGACTGGCTGCCTGACTGGCTCTCTTCCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| 3UTR TCA 72 bp | GTGACAGAGACCGGGCAGAGGCAAGTGACTGGGAAGTaGGAACATGAAGGCAGGGGACCCATAAGTCCTCCA | + |
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Preference number: 3 (lower is better) Translates to: VTETGQRQVTGK*EHEGRGPISPP Trigger: TGGAGGACTTATGGGTCCCCTGCCTTCATGTTCTCACTTCCCAGTCACTTGCCTCTGCCCGGTCTCTGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| 3UTR TCA 72 bp | TCTGGGAAGGAGAATCATCAGAACCAGCTTAGAGGCTaGCACAGAGGTAGCCAGAGAGCTCTGCTGGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: SGKENHQNQLRG*HRGSQRALLGW Trigger: CCACCCCAGCAGAGCTCTCTGGCTACCTCTGTGTCAGCCTCTAAGCTGGTTCTGATGATTCTCCTTCCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| 3UTR TCA 72 bp | GTGGCCAGTCTCCAGAAGGCAGCTCCAGACAGTATGTaGCCCTGGGCTGGGTGTTCTGTTGATAGATGTCTT | + |
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Preference number: 3 (lower is better) Translates to: VASLQKAAPDSM*PWAGCSVDRCL Trigger: AAGACATCTATCAACAGAACACCCAGCCCAGGGTCACATACTGTCTGGAGCTGCCTTCTGGAGACTGGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| 3UTR TCA 72 bp | TGGGGCTCCACATTAGAGTCAGTGCTCCAAAAGTCCTaGTCTCTGGGAAGGAGAATCATCAGAACCAGCTTA | + |
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Preference number: 3 (lower is better) Translates to: WGSTLESVLQKS*SLGRRIIRTSL Trigger: TAAGCTGGTTCTGATGATTCTCCTTCCCAGAGATCAGGACTTTTGGAGCACTGACTCTAATGTGGAGCCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS-3UTR GCA 90 bp | GGCCTTGGGAGGAGAGAAGCCCAGGCAGGTGTTTTGGAAGGCAATCAGGGGCCAATTGTAATGCCCTGGTaGTGGCCCTCCGGATGCCGA | + |
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Preference number: 4 (lower is better) Translates to: GLGRREAQAGVLEGNQGPIVMPW*WPSGCR Trigger: TCGGCATCCGGAGGGCCAGCACCAGGGCATTACAAT...TGGCCCCTGATTGCCTTCCAAAACACCTGCCTGGGCTTCTCTCCTCCCAAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| 3UTR CAA 72 bp | TGTGACCCTGGGCTGGGTGTTCTGTTGATAGATGTCTaGAGGAGCAGGGTCAGGGGGTCTGGCGAGCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: CDPGLGVLLIDV*RSRVRGSGELS Trigger: GCTCAGCTCGCCAGACCCCCTGACCCTGCTCCTCAAGACATCTATCAACAGAACACCCAGCCCAGGGTCACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS-3UTR TCA 90 bp | TGCCACCCAGAAGACAAGGACAATCTGGAGGACAGGGCCTCGGCACCCTGGCTGCTTGGAAGCCAAGTCTaGCCGGATGGTATACGCGTT | + |
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Preference number: 4 (lower is better) Translates to: CHPEDKDNLEDRASAPWLLGSQV*PDGIRV Trigger: AACGCGTATACCATCCGGTCAGACTTGGCTTCCAAG...CAGCCAGGGTGCCGAGGCCCTGTCCTCCAGATTGTCCTTGTCTTCTGGGTGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS-3UTR CCA 90 bp | GATAGATGTCTTGAGGAGCAGGGTCAGGGGGTCTGGCGAGCTGAGCCTCTCTCTGGCAGGGGCAGAGGGTaGGCAGAAAAGTTCAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: DRCLEEQGQGVWRAEPLSGRGRG*AEKFRS Trigger: ACTCCTGAACTTTTCTGCCCACCCTCTGCCCCTGCC...AGAGAGAGGCTCAGCTCGCCAGACCCCCTGACCCTGCTCCTCAAGACATCTATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS-3UTR CCA 90 bp | GTCTTGAGGAGCAGGGTCAGGGGGTCTGGCGAGCTGAGCCTCTCTCTCCCTCTGCGGGAAGGTTTGGTTTaGATGACTTCATTGGCCACC | + |
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Preference number: 4 (lower is better) Translates to: VLRSRVRGSGELSLSLPLREGLV*MTSLAT Trigger: GGTGGCCAATGAAGTCATCCAAACCAAACCTTCCCG...CAGAGGGAGAGAGAGGCTCAGCTCGCCAGACCCCCTGACCCTGCTCCTCAAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS-3UTR CCA 90 bp | ACCTCTGAGCCTTCCTGCCACCCAGAAGACAAGGACAATCTGGAGGACAGGGCCCTTCCCTGGAATCTCTaGCTTGTACGTGGCTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: TSEPSCHPEDKDNLEDRALPWNL*LVRGWA Trigger: GGCCCAGCCACGTACAAGCCAGAGATTCCAGGGAAG...GGCCCTGTCCTCCAGATTGTCCTTGTCTTCTGGGTGGCAGGAAGGCTCAGAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS-3UTR TCA 90 bp | ATAGATGTCTTGAGGAGCAGGGTCAGGGGGTCTGGCGAGCTGAGCCTCTCTCTCACGATGCACTGGAGATaGAGTGCTTTGGGGGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: IDVLRSRVRGSGELSLSLTMHWR*SALGVP Trigger: AGGGACCCCCAAAGCACTTCATCTCCAGTGCATCGT...GAGAGAGAGGCTCAGCTCGCCAGACCCCCTGACCCTGCTCCTCAAGACATCTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS-3UTR CCA 90 bp | GTCTTGAGGAGCAGGGTCAGGGGGTCTGGCGAGCTGAGCCTCTCTCTCCCTCTGGAAGGATTGCTTCCCTaGAATCTCTGGCTTGTACGT | + |
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Preference number: 4 (lower is better) Translates to: VLRSRVRGSGELSLSLPLEGLLP*NLWLVR Trigger: ACGTACAAGCCAGAGATTCCAGGGAAGCAATCCTTC...CAGAGGGAGAGAGAGGCTCAGCTCGCCAGACCCCCTGACCCTGCTCCTCAAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS-3UTR TCA 90 bp | AAGCCCAGGAGGCAGAGTTCTCAGAAAATGTCAAGGAAGGGGCCTTGGGAGGAGTTCACGATCTCATACTaGCCAGGGCCAGGCAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: KPRRQSSQKMSRKGPWEEFTISY*PGPGRG Trigger: ACCCCTGCCTGGCCCTGGTCAGTATGAGATCGTGAA...CTCCTCCCAAGGCCCCTTCCTTGACATTTTCTGAGAACTCTGCCTCCTGGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS-3UTR CCA 90 bp | TGCCACCCAGAAGACAAGGACAATCTGGAGGACAGGGCCTCGGCACCCTGGCTGATGAAGCTTGGCAGCTaGAACATGCTGGAACAGGAA | + |
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Preference number: 4 (lower is better) Translates to: CHPEDKDNLEDRASAPWLMKLGS*NMLEQE Trigger: TTCCTGTTCCAGCATGTTCCAGCTGCCAAGCTTCAT...CAGCCAGGGTGCCGAGGCCCTGTCCTCCAGATTGTCCTTGTCTTCTGGGTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS-3UTR TCA 90 bp | GTCTTGAGGAGCAGGGTCAGGGGGTCTGGCGAGCTGAGCCTCTCTCTCCCTCTGATTTTTCCACTTTCATaGAGCTTGGCAGCTGGAACA | + |
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Preference number: 4 (lower is better) Translates to: VLRSRVRGSGELSLSLPLIFPLS*SLAAGT Trigger: TGTTCCAGCTGCCAAGCTTCATGAAAGTGGAAAAAT...CAGAGGGAGAGAGAGGCTCAGCTCGCCAGACCCCCTGACCCTGCTCCTCAAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| 3UTR CAA 72 bp | CTCCAGACAGTATGTGACCCTGGGCTGGGTGTTCTGTaGATAGATGTCTTGAGGAGCAGGGTCAGGGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: LQTVCDPGLGVL*IDVLRSRVRGS Trigger: AGACCCCCTGACCCTGCTCCTCAAGACATCTATCAACAGAACACCCAGCCCAGGGTCACATACTGTCTGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS-3UTR CCA 90 bp | AAGCCCAGGAGGCAGAGTTCTCAGAAAATGTCAAGGAAGGGGCCTTGGGAGGAGGGAGATGAAGTGCTTTaGGGGTCCCTCGTAGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: KPRRQSSQKMSRKGPWEEGDEVL*GSLVVH Trigger: GTGAACTACGAGGGACCCCCAAAGCACTTCATCTCC...CTCCTCCCAAGGCCCCTTCCTTGACATTTTCTGAGAACTCTGCCTCCTGGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS-3UTR CCA 90 bp | GAAGCAGGAAGGGAAGGCACATTTCATCTTCGTTCTTGGTCAGATCTCCCACAAGCCACCGGCTGGTGTTaGACACAAACGATGCACTGG | + |
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Preference number: 4 (lower is better) Translates to: EAGREGTFHLRSWSDLPQATGWC*TQTMHW Trigger: CCAGTGCATCGTTTGTGTCCAACACCAGCCGGTGGC...TTGTGGGAGATCTGACCAAGAACGAAGATGAAATGTGCCTTCCCTTCCTGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS-3UTR TCA 90 bp | AGTCAGTGCTCCAAAAGTCCTGATCTCTGGGAAGGAGAATCATCAGAACCAGCTCTGGAGACTGGTGGATaGCATTGTAGAACCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: SQCSKSPDLWEGESSEPALETGG*HCRTQG Trigger: GCCCTGGGTTCTACAATGTCATCCACCAGTCTCCAG...AGCTGGTTCTGATGATTCTCCTTCCCAGAGATCAGGACTTTTGGAGCACTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| 3UTR CAA 72 bp | GTAGACCAGGCTACCTCGCCATTCCAAAGCTTTGGCTaGAGGGAATCTGAAGATCACAAAGAACCCGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: VDQATSPFQSFG*RESEDHKEPGF Trigger: GAAGCCGGGTTCTTTGTGATCTTCAGATTCCCTCAAGCCAAAGCTTTGGAATGGCGAGGTAGCCTGGTCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS-3UTR TCA 90 bp | CAGAGGAGGGAAGGGGAGGCTATGAGGATGTCATTTAGGAAAGTGACAGACATTAAAGAGAGGCACTGCTaGACACTGGAGACTGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: QRREGEAMRMSFRKVTDIKERHC*TLETGG Trigger: TCCACCAGTCTCCAGTGTTCAGCAGTGCCTCTCTTT...AATGTCTGTCACTTTCCTAAATGACATCCTCATAGCCTCCCCTTCCCTCCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| 3UTR CAA 72 bp | AGAAGCAGGAAGGGAAGGCACATTTCATCTTCGTTCTaGGTCAGATCTCCCACAAGCCATGATCTCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: RSRKGRHISSSF*VRSPTSHDLSG Trigger: CCCTGAGAGATCATGGCTTGTGGGAGATCTGACCAAGAACGAAGATGAAATGTGCCTTCCCTTCCTGCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS-3UTR TCA 90 bp | CAGAGGAGGGAAGGGGAGGCTATGAGGATGTCATTTAGGAAAGTGACAGACATTTGGAACAGGAATTGCTaGAGTCCTTCTTGGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: QRREGEAMRMSFRKVTDIWNRNC*SPSWKP Trigger: TGGCTTCCAAGAAGGACTTCAGCAATTCCTGTTCCA...AATGTCTGTCACTTTCCTAAATGACATCCTCATAGCCTCCCCTTCCCTCCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS-3UTR CCA 90 bp | GAAGCAGGAAGGGAAGGCACATTTCATCTTCGTTCTTGGTCAGATCTCCCACAATGTGTCTATAAGGGATaGAGGACTGAGTTGGGTATG | + |
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Preference number: 4 (lower is better) Translates to: EAGREGTFHLRSWSDLPQCVYKG*RTELGM Trigger: CATACCCAACTCAGTCCTCCATCCCTTATAGACACA...TTGTGGGAGATCTGACCAAGAACGAAGATGAAATGTGCCTTCCCTTCCTGCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS-3UTR GCA 90 bp | AGTGCTCCAAAAGTCCTGATCTCTGGGAAGGAGAATCATCAGAACCAGCTTAGAGTTGGACACAAACGATaGACTGGAGATGAAGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: SAPKVLISGKENHQNQLRVGHKR*TGDEVL Trigger: AAGCACTTCATCTCCAGTGCATCGTTTGTGTCCAAC...TCTAAGCTGGTTCTGATGATTCTCCTTCCCAGAGATCAGGACTTTTGGAGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS-3UTR CAA 90 bp | GGGACAGTGGCGCCATGCCTCTCGCTCCAGCTAGAGGCTCTGCCTAGCCTGCTGGGCCACCGGCTGGTGTaGGACACAAACGATGCACTG | + |
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Preference number: 5 (lower is better) Translates to: GTVAPCLSLQLEALPSLLGHRLV*DTNDAL Trigger: CAGTGCATCGTTTGTGTCCAACACCAGCCGGTGGCC...CAGCAGGCTAGGCAGAGCCTCTAGCTGGAGCGAGAGGCATGGCGCCACTGTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS-3UTR CAA 90 bp | ACCTCTGAGCCTTCCTGCCACCCAGAAGACAAGGACAATCTGGAGGACAGGGCCCCTGGAATCTCTGGCTaGTACGTGGCTGGGCCGGGA | + |
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Preference number: 5 (lower is better) Translates to: TSEPSCHPEDKDNLEDRAPGISG*YVAGPG Trigger: TCCCGGCCCAGCCACGTACAAGCCAGAGATTCCAGG...GGCCCTGTCCTCCAGATTGTCCTTGTCTTCTGGGTGGCAGGAAGGCTCAGAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS TCA 90 bp | CATTGTAATGCCCTGGTGCTGGCCCTCCGGATGCCGACGAGGGTATaGATCCTCTCGGCGTTTTCGACAGAAACCCGGCTCGAGCGCAGA | + |
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Preference number: 5 (lower is better) Translates to: HCNALVLALRMPTRV*ILSAFSTETRLERR Trigger: TCTGCGCTCGAGCCGGGTTTCTGTCGAAAACGCCGAGAGGATTCATACCCTCGTCGGCATCCGGAGGGCCAGCACCAGGGCATTACAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS-3UTR CAA 90 bp | TGCCACCCAGAAGACAAGGACAATCTGGAGGACAGGGCCTCGGCACCCTGGCTGGTGCACGTTCCTCTCTaGGAAAGAGAGGCACTGCTG | + |
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Preference number: 5 (lower is better) Translates to: CHPEDKDNLEDRASAPWLVHVPL*EREALL Trigger: CAGCAGTGCCTCTCTTTCCAAGAGAGGAACGTGCAC...CAGCCAGGGTGCCGAGGCCCTGTCCTCCAGATTGTCCTTGTCTTCTGGGTGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS-3UTR CAA 90 bp | GGGACAGTGGCGCCATGCCTCTCGCTCCAGCTAGAGGCTCTGCCTAGCCTGCTGAGGCATTGTAATGGTTaGGGGCAGGGGTTTCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: GTVAPCLSLQLEALPSLLRHCNG*GQGFQI Trigger: AATCTGAAACCCCTGCCCCAAACCATTACAATGCCT...CAGCAGGCTAGGCAGAGCCTCTAGCTGGAGCGAGAGGCATGGCGCCACTGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS-3UTR CAA 90 bp | AAGCCCAGGAGGCAGAGTTCTCAGAAAATGTCAAGGAAGGGGCCTTGGGAGGAGCGGGTCCCGGGCCTATaGAGGTCGGCTTTAATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: KPRRQSSQKMSRKGPWEERVPGL*RSALIH Trigger: GTGGATTAAAGCCGACCTCAATAGGCCCGGGACCCG...CTCCTCCCAAGGCCCCTTCCTTGACATTTTCTGAGAACTCTGCCTCCTGGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS CCA 90 bp | CCGGCTGGTGTTGGACACAAACGATGCACTGGAGATGAAGTGCTTTaGGGGTCCCTCGTAGTTCACGATCTCATACTGACCAGGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PAGVGHKRCTGDEVL*GSLVVHDLILTRAR Trigger: CCTGGCCCTGGTCAGTATGAGATCGTGAACTACGAGGGACCCCCAAAGCACTTCATCTCCAGTGCATCGTTTGTGTCCAACACCAGCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS TCA 90 bp | AATCTCTGGCTTGTACGTGGCTGGGCCGGGAAGGTTTGGTTTGGATaGCTTCATTGGCCACCGGCTGGTGTTGGACACAAACGATGCACT | + |
|
Preference number: 5 (lower is better) Translates to: NLWLVRGWAGKVWFG*LHWPPAGVGHKRCT Trigger: AGTGCATCGTTTGTGTCCAACACCAGCCGGTGGCCAATGAAGTCATCCAAACCAAACCTTCCCGGCCCAGCCACGTACAAGCCAGAGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS CCA 90 bp | AAAAGTGCACGTTCCTCTCTTGGAAAGAGAGGCACTGCTGAACACTaGAGACTGGTGGATGACATTGTAGAACCCAGGGCCCGGGACGTC | + |
|
Preference number: 5 (lower is better) Translates to: KSARSSLGKRGTAEH*RLVDDIVEPRARDV Trigger: GACGTCCCGGGCCCTGGGTTCTACAATGTCATCCACCAGTCTCCAGTGTTCAGCAGTGCCTCTCTTTCCAAGAGAGGAACGTGCACTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS-3UTR CAA 90 bp | AGAACCAGCTTAGAGGCTGACACAGAGGTAGCCAGAGAGCTCTGCTGGGGTGGGCGGCCAGTTCTGGATTaGAAGCAGGACATTAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RTSLEADTEVARELCWGGRPVLD*KQDIKN Trigger: GTTCTTAATGTCCTGCTTCAAATCCAGAACTGGCCG...CCCACCCCAGCAGAGCTCTCTGGCTACCTCTGTGTCAGCCTCTAAGCTGGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
||
| CDS-3UTR CAA 90 bp | AGAACCAGCTTAGAGGCTGACACAGAGGTAGCCAGAGAGCTCTGCTGGGGTGGGATTGTAGAGGAAGGATaGCTTCCCTGGAATCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RTSLEADTEVARELCWGGIVEEG*LPWNLW Trigger: CCAGAGATTCCAGGGAAGCAATCCTTCCTCTACAAT...CCCACCCCAGCAGAGCTCTCTGGCTACCTCTGTGTCAGCCTCTAAGCTGGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS TCA 90 bp | TCATTGGCCACCGGCTGGTGTTGGACACAAACGATGCACTGGAGATaGAGTGCTTTGGGGGTCCCTCGTAGTTCACGATCTCATACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SLATGWCWTQTMHWR*SALGVPRSSRSHTD Trigger: GTCAGTATGAGATCGTGAACTACGAGGGACCCCCAAAGCACTTCATCTCCAGTGCATCGTTTGTGTCCAACACCAGCCGGTGGCCAATGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS CCA 90 bp | CATTGTAGAGGAAGGATTGCTTCCCTGGAATCTCTGGCTTGTACGTaGCTGGGCCGGGAAGGTTTGGTTTGGATGACTTCATTGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: HCRGRIASLESLACT*LGREGLVWMTSLAT Trigger: GGTGGCCAATGAAGTCATCCAAACCAAACCTTCCCGGCCCAGCCACGTACAAGCCAGAGATTCCAGGGAAGCAATCCTTCCTCTACAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
||
| CDS TCA 90 bp | CCGGGCCTATTGAGGTCGGCTTTAATCCACGGCCAGTTCTGGATTTaGAGCAGGACATTAAGAACTTTGGCGATTGCCTCACCAGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: PGLLRSALIHGQFWI*SRTLRTLAIASPGT Trigger: AGTCCCTGGTGAGGCAATCGCCAAAGTTCTTAATGTCCTGCTTCAAATCCAGAACTGGCCGTGGATTAAAGCCGACCTCAATAGGCCCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS-3UTR CAA 90 bp | ACCTCTGAGCCTTCCTGCCACCCAGAAGACAAGGACAATCTGGAGGACAGGGCCCTGATTCTGGGATTATaGACGTCCTGTGTCTATAAG | + |
|
Preference number: 5 (lower is better) Translates to: TSEPSCHPEDKDNLEDRALILGL*TSCVYK Trigger: CTTATAGACACAGGACGTCAATAATCCCAGAATCAG...GGCCCTGTCCTCCAGATTGTCCTTGTCTTCTGGGTGGCAGGAAGGCTCAGAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS CCA 90 bp | AGGGACCCATTTGTTGTCTTCATTGTAGAGGAAGGATTGCTTCCCTaGAATCTCTGGCTTGTACGTGGCTGGGCCGGGAAGGTTTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RDPFVVFIVEEGLLP*NLWLVRGWAGKVWF Trigger: AAACCAAACCTTCCCGGCCCAGCCACGTACAAGCCAGAGATTCCAGGGAAGCAATCCTTCCTCTACAATGAAGACAACAAATGGGTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS-3UTR CAA 90 bp | CTCCACATTAGAGTCAGTGCTCCAAAAGTCCTGATCTCTGGGAAGGAGAATCATGCTCGAGCGCAGACATaGTTTTTCTGTCTGCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LHIRVSAPKVLISGKENHARAQT*FFCLQE Trigger: CTCCTGCAGACAGAAAAACAATGTCTGCGCTCGAGC...ATGATTCTCCTTCCCAGAGATCAGGACTTTTGGAGCACTGACTCTAATGTGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS TCA 90 bp | CATGCTGGAACAGGAATTGCTGAAGTCCTTCTTGGAAGCCAAGTCTaGCCGGATGGTATACGCGTTGGCAGCGGGATTTTTAGAAATGAT | + |
|
Preference number: 5 (lower is better) Translates to: HAGTGIAEVLLGSQV*PDGIRVGSGIFRND Trigger: ATCATTTCTAAAAATCCCGCTGCCAACGCGTATACCATCCGGTCAGACTTGGCTTCCAAGAAGGACTTCAGCAATTCCTGTTCCAGCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
||
| CDS GCA 90 bp | ACCTTTCTGAACTCTGTCGGCGTGCTTCTTAGGTTTGTCAAGGTCTaGCCTCAGGACAACGTTGTCCAAGTTAGCAAATTTCTGGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: TFLNSVGVLLRFVKV*PQDNVVQVSKFLGH Trigger: ATGTCCCAGAAATTTGCTAACTTGGACAACGTTGTCCTGAGGGCAGACCTTGACAAACCTAAGAAGCACGCCGACAGAGTTCAGAAAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
||
| CDS-3UTR CAA 90 bp | GAAGCAGGAAGGGAAGGCACATTTCATCTTCGTTCTTGGTCAGATCTCCCACAAATAAAATCTCCTGGCTaGGCTGTTAAATCCCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: EAGREGTFHLRSWSDLPQIKSPG*AVKSLF Trigger: AAAAAGGGATTTAACAGCCAAGCCAGGAGATTTTAT...TTGTGGGAGATCTGACCAAGAACGAAGATGAAATGTGCCTTCCCTTCCTGCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
||
| CDS-3UTR CAA 90 bp | CAGAGGAGGGAAGGGGAGGCTATGAGGATGTCATTTAGGAAAGTGACAGACATTTTTCAGAATCTTGGTTaGATCATTCGGGTTGTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: QRREGEAMRMSFRKVTDIFQNLG*IIRVVV Trigger: TACTACAACCCGAATGATCAAACCAAGATTCTGAAA...AATGTCTGTCACTTTCCTAAATGACATCCTCATAGCCTCCCCTTCCCTCCTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
||
| CDS TCA 72 bp | GCCCTGGTGCTGGCCCTCCGGATGCCGACGAGGGTATaGATCCTCTCGGCGTTTTCGACAGAAACCCGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ALVLALRMPTRV*ILSAFSTETRL Trigger: GAGCCGGGTTTCTGTCGAAAACGCCGAGAGGATTCATACCCTCGTCGGCATCCGGAGGGCCAGCACCAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS GCA 72 bp | CCTCACCAGGGACTCGTTGACATTGTAATGCCCTGGTaGTGGCCCTCCGGATGCCGACGAGGGTATGAATCC | + |
|
Preference number: 6 (lower is better) Translates to: PHQGLVDIVMPW*WPSGCRRGYES Trigger: GGATTCATACCCTCGTCGGCATCCGGAGGGCCAGCACCAGGGCATTACAATGTCAACGAGTCCCTGGTGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS CAA 90 bp | GGGCCCAGCCGGGCACACGTGGAGGGAAAAGTGCACGTTCCTCTCTaGGAAAGAGAGGCACTGCTGAACACTGGAGACTGGTGGATGACA | + |
|
Preference number: 6 (lower is better) Translates to: GPSRAHVEGKVHVPL*EREALLNTGDWWMT Trigger: TGTCATCCACCAGTCTCCAGTGTTCAGCAGTGCCTCTCTTTCCAAGAGAGGAACGTGCACTTTTCCCTCCACGTGTGCCCGGCTGGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS CCA 72 bp | CTGGCTTGTACGTGGCTGGGCCGGGAAGGTTTGGTTTaGATGACTTCATTGGCCACCGGCTGGTGTTGGACA | + |
|
Preference number: 6 (lower is better) Translates to: LACTWLGREGLV*MTSLATGWCWT Trigger: TGTCCAACACCAGCCGGTGGCCAATGAAGTCATCCAAACCAAACCTTCCCGGCCCAGCCACGTACAAGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS CAA 90 bp | GCTTCCCTGGAATCTCTGGCTTGTACGTGGCTGGGCCGGGAAGGTTaGGTTTGGATGACTTCATTGGCCACCGGCTGGTGTTGGACACAA | + |
|
Preference number: 6 (lower is better) Translates to: ASLESLACTWLGREG*VWMTSLATGWCWTQ Trigger: TTGTGTCCAACACCAGCCGGTGGCCAATGAAGTCATCCAAACCAAACCTTCCCGGCCCAGCCACGTACAAGCCAGAGATTCCAGGGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS CAA 72 bp | CGGGCACACGTGGAGGGAAAAGTGCACGTTCCTCTCTaGGAAAGAGAGGCACTGCTGAACACTGGAGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: RAHVEGKVHVPL*EREALLNTGDW Trigger: CCAGTCTCCAGTGTTCAGCAGTGCCTCTCTTTCCAAGAGAGGAACGTGCACTTTTCCCTCCACGTGTGCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS CAA 72 bp | TGGCTGGGCCGGGAAGGTTTGGTTTGGATGACTTCATaGGCCACCGGCTGGTGTTGGACACAAACGATGCAC | + |
|
Preference number: 6 (lower is better) Translates to: WLGREGLVWMTS*ATGWCWTQTMH Trigger: GTGCATCGTTTGTGTCCAACACCAGCCGGTGGCCAATGAAGTCATCCAAACCAAACCTTCCCGGCCCAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS CAA 90 bp | CTGAAGTCCTTCTTGGAAGCCAAGTCTGACCGGATGGTATACGCGTaGGCAGCGGGATTTTTAGAAATGATGGGGCCCAGCCGGGCACAC | + |
|
Preference number: 6 (lower is better) Translates to: LKSFLEAKSDRMVYA*AAGFLEMMGPSRAH Trigger: GTGTGCCCGGCTGGGCCCCATCATTTCTAAAAATCCCGCTGCCAACGCGTATACCATCCGGTCAGACTTGGCTTCCAAGAAGGACTTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS CAA 90 bp | CCGGGAAGGTTTGGTTTGGATGACTTCATTGGCCACCGGCTGGTGTaGGACACAAACGATGCACTGGAGATGAAGTGCTTTGGGGGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PGRFGLDDFIGHRLV*DTNDALEMKCFGGP Trigger: GGGACCCCCAAAGCACTTCATCTCCAGTGCATCGTTTGTGTCCAACACCAGCCGGTGGCCAATGAAGTCATCCAAACCAAACCTTCCCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS TCA 72 bp | CTTGTACGTGGCTGGGCCGGGAAGGTTTGGTTTGGATaGCTTCATTGGCCACCGGCTGGTGTTGGACACAAA | + |
|
Preference number: 6 (lower is better) Translates to: LVRGWAGKVWFG*LHWPPAGVGHK Trigger: TTTGTGTCCAACACCAGCCGGTGGCCAATGAAGTCATCCAAACCAAACCTTCCCGGCCCAGCCACGTACAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS GCA 72 bp | CTTCATTGGCCACCGGCTGGTGTTGGACACAAACGATaGACTGGAGATGAAGTGCTTTGGGGGTCCCTCGTA | + |
|
Preference number: 6 (lower is better) Translates to: LHWPPAGVGHKR*TGDEVLWGSLV Trigger: TACGAGGGACCCCCAAAGCACTTCATCTCCAGTGCATCGTTTGTGTCCAACACCAGCCGGTGGCCAATGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS CAA 90 bp | CTTGGCAGCTGGAACATGCTGGAACAGGAATTGCTGAAGTCCTTCTaGGAAGCCAAGTCTGACCGGATGGTATACGCGTTGGCAGCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LGSWNMLEQELLKSF*EAKSDRMVYALAAG Trigger: TCCCGCTGCCAACGCGTATACCATCCGGTCAGACTTGGCTTCCAAGAAGGACTTCAGCAATTCCTGTTCCAGCATGTTCCAGCTGCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS CAA 90 bp | CTAGACCGCAGGGACCCATTTGTTGTCTTCATTGTAGAGGAAGGATaGCTTCCCTGGAATCTCTGGCTTGTACGTGGCTGGGCCGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LDRRDPFVVFIVEEG*LPWNLWLVRGWAGK Trigger: CTTCCCGGCCCAGCCACGTACAAGCCAGAGATTCCAGGGAAGCAATCCTTCCTCTACAATGAAGACAACAAATGGGTCCCTGCGGTCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS CCA 72 bp | GGAAGGATTGCTTCCCTGGAATCTCTGGCTTGTACGTaGCTGGGCCGGGAAGGTTTGGTTTGGATGACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: GRIASLESLACT*LGREGLVWMTS Trigger: TGAAGTCATCCAAACCAAACCTTCCCGGCCCAGCCACGTACAAGCCAGAGATTCCAGGGAAGCAATCCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
||
| CDS CAA 72 bp | GATCATTCGGGTTGTAGTAACCGGGTCCCGGGCCTATaGAGGTCGGCTTTAATCCACGGCCAGTTCTGGATT | + |
|
Preference number: 6 (lower is better) Translates to: DHSGCSNRVPGL*RSALIHGQFWI Trigger: AATCCAGAACTGGCCGTGGATTAAAGCCGACCTCAATAGGCCCGGGACCCGGTTACTACAACCCGAATGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
||
| CDS CAA 72 bp | TTCTTGGAAGCCAAGTCTGACCGGATGGTATACGCGTaGGCAGCGGGATTTTTAGAAATGATGGGGCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FLEAKSDRMVYA*AAGFLEMMGPS Trigger: GCTGGGCCCCATCATTTCTAAAAATCCCGCTGCCAACGCGTATACCATCCGGTCAGACTTGGCTTCCAAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS GCA 72 bp | CCTGTGTCTATAAGGGATGGAGGACTGAGTTGGGTATaGAGCCGTAAAACCTTTCTGAACTCTGTCGGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: PVSIRDGGLSWV*SRKTFLNSVGV Trigger: CACGCCGACAGAGTTCAGAAAGGTTTTACGGCTGCATACCCAACTCAGTCCTCCATCCCTTATAGACACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS CCA 72 bp | GTTGGACACAAACGATGCACTGGAGATGAAGTGCTTTaGGGGTCCCTCGTAGTTCACGATCTCATACTGACC | + |
|
Preference number: 6 (lower is better) Translates to: VGHKRCTGDEVL*GSLVVHDLILT Trigger: GGTCAGTATGAGATCGTGAACTACGAGGGACCCCCAAAGCACTTCATCTCCAGTGCATCGTTTGTGTCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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| CDS CCA 72 bp | TTTGTTGTCTTCATTGTAGAGGAAGGATTGCTTCCCTaGAATCTCTGGCTTGTACGTGGCTGGGCCGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: FVVFIVEEGLLP*NLWLVRGWAGK Trigger: CTTCCCGGCCCAGCCACGTACAAGCCAGAGATTCCAGGGAAGCAATCCTTCCTCTACAATGAAGACAACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
||
| CDS CAA 72 bp | ATGAAGCTTGGCAGCTGGAACATGCTGGAACAGGAATaGCTGAAGTCCTTCTTGGAAGCCAAGTCTGACCGG | + |
|
Preference number: 6 (lower is better) Translates to: MKLGSWNMLEQE*LKSFLEAKSDR Trigger: CCGGTCAGACTTGGCTTCCAAGAAGGACTTCAGCAATTCCTGTTCCAGCATGTTCCAGCTGCCAAGCTTCAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
||
| CDS TCA 72 bp | ACAGGAATTGCTGAAGTCCTTCTTGGAAGCCAAGTCTaGCCGGATGGTATACGCGTTGGCAGCGGGATTTTT | + |
|
Preference number: 6 (lower is better) Translates to: TGIAEVLLGSQV*PDGIRVGSGIF Trigger: AAAAATCCCGCTGCCAACGCGTATACCATCCGGTCAGACTTGGCTTCCAAGAAGGACTTCAGCAATTCCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
||
| CDS CAA 72 bp | TGGAACATGCTGGAACAGGAATTGCTGAAGTCCTTCTaGGAAGCCAAGTCTGACCGGATGGTATACGCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: WNMLEQELLKSF*EAKSDRMVYAL Trigger: CAACGCGTATACCATCCGGTCAGACTTGGCTTCCAAGAAGGACTTCAGCAATTCCTGTTCCAGCATGTTCCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
||
| CDS CAA 72 bp | AGGGACCCATTTGTTGTCTTCATTGTAGAGGAAGGATaGCTTCCCTGGAATCTCTGGCTTGTACGTGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RDPFVVFIVEEG*LPWNLWLVRGW Trigger: CCAGCCACGTACAAGCCAGAGATTCCAGGGAAGCAATCCTTCCTCTACAATGAAGACAACAAATGGGTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
||
| CDS CAA 90 bp | TCCACTTTCATGAAGCTTGGCAGCTGGAACATGCTGGAACAGGAATaGCTGAAGTCCTTCTTGGAAGCCAAGTCTGACCGGATGGTATAC | + |
|
Preference number: 6 (lower is better) Translates to: STFMKLGSWNMLEQE*LKSFLEAKSDRMVY Trigger: GTATACCATCCGGTCAGACTTGGCTTCCAAGAAGGACTTCAGCAATTCCTGTTCCAGCATGTTCCAGCTGCCAAGCTTCATGAAAGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
||
| CDS CCA 72 bp | CTGTCTGCAGGAGGCGATGGAGGCATTGTAATGGTTTaGGGCAGGGGTTTCAGATTTTTCCACTTTCATGAA | + |
|
Preference number: 6 (lower is better) Translates to: LSAGGDGGIVMV*GRGFRFFHFHE Trigger: TTCATGAAAGTGGAAAAATCTGAAACCCCTGCCCCAAACCATTACAATGCCTCCATCGCCTCCTGCAGACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
||
| CDS CAA 72 bp | TTTGGTTTGGATGACTTCATTGGCCACCGGCTGGTGTaGGACACAAACGATGCACTGGAGATGAAGTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: FGLDDFIGHRLV*DTNDALEMKCF Trigger: AAAGCACTTCATCTCCAGTGCATCGTTTGTGTCCAACACCAGCCGGTGGCCAATGAAGTCATCCAAACCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
||
| CDS TCA 72 bp | TTGAGGTCGGCTTTAATCCACGGCCAGTTCTGGATTTaGAGCAGGACATTAAGAACTTTGGCGATTGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LRSALIHGQFWI*SRTLRTLAIAS Trigger: TGAGGCAATCGCCAAAGTTCTTAATGTCCTGCTTCAAATCCAGAACTGGCCGTGGATTAAAGCCGACCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
||
| CDS GCA 72 bp | AACTCTGTCGGCGTGCTTCTTAGGTTTGTCAAGGTCTaGCCTCAGGACAACGTTGTCCAAGTTAGCAAATTT | + |
|
Preference number: 6 (lower is better) Translates to: NSVGVLLRFVKV*PQDNVVQVSKF Trigger: AAATTTGCTAACTTGGACAACGTTGTCCTGAGGGCAGACCTTGACAAACCTAAGAAGCACGCCGACAGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063707.3 |
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