RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STOX2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038143

Ensembl transcript IDs: ENSMUST00000079195.6, ENSMUST00000110367.10, ENSMUST00000209337.2, ENSMUST00000210030.2, ENSMUST00000210153.2, ENSMUST00000211737.2, ENSMUST00000211882.2

Found 883 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGTGGGCGGCACCTGGCAGAGCGGAGGAGGGCAGTAAGGGTCTTTaGAGTCCTTGGCGGACTTCCTCTGCAGGGTGGAGGCATGCATGC +
Preference number: 1 (lower is better)
Translates to: QWAAPGRAEEGSKGL*SPWRTSSAGWRHAC
Trigger: GCATGCATGCCTCCACCCTGCAGAGGAAGTCCGCCAAGGACTGCAAAGACCCTTACTGCCCTCCTCCGCTCTGCCAGGTGCCGCCCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CCA 90 bp GCACCTGGCAGAGCGGAGGAGGGCAGTAAGGGTCTTTGCAGTCCTTaGCGGACTTCCTCTGCAGGGTGGAGGCATGCATGCTGTGCACGT +
Preference number: 1 (lower is better)
Translates to: APGRAEEGSKGLCSP*RTSSAGWRHACCAR
Trigger: ACGTGCACAGCATGCATGCCTCCACCCTGCAGAGGAAGTCCGCCAAGGACTGCAAAGACCCTTACTGCCCTCCTCCGCTCTGCCAGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR GCA 90 bp GGGTCTTTGCAGTCCTTGGCGGACTTCCTCTGCAGGGTGGAGGCATaGATGCTGTGCACGTCTTCTCGGCAGCAGTGGCAAGAGTCGCAG +
Preference number: 1 (lower is better)
Translates to: GSLQSLADFLCRVEA*MLCTSSRQQWQESQ
Trigger: CTGCGACTCTTGCCACTGCTGCCGAGAAGACGTGCACAGCATGCATGCCTCCACCCTGCAGAGGAAGTCCGCCAAGGACTGCAAAGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR GCA 90 bp CCAGATGCGAGCCATCCGAAGGATCTCCTTTGGACACTCGCGTCTTaGTGTGTGACCGAGACTTCCCGTGGGACTTGCGGTGAGTCCGGC +
Preference number: 1 (lower is better)
Translates to: PDASHPKDLLWTLAS*CVTETSRGTCGESG
Trigger: GCCGGACTCACCGCAAGTCCCACGGGAAGTCTCGGTCACACAGCAAGACGCGAGTGTCCAAAGGAGATCCTTCGGATGGCTCGCATCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CCA 90 bp AGCTTCGCTGGTCGGGGGATCCGTACTGGCGCGGAAGTTGAAGGTTaGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTCTGACG +
Preference number: 1 (lower is better)
Translates to: SFAGRGIRTGAEVEG*TSSAMGWTQSRILT
Trigger: CGTCAGAATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAACTTCCGCGCCAGTACGGATCCCCCGACCAGCGAAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR CCA 90 bp GATCTCCGGTCCTGGGTATGGCTGTGGCTTCGGTGCACTTTGGAGTaGGAGCTTCCCCTGGAGGGTTCGGGAAAGGGCATCTCCGTTCTC +
Preference number: 1 (lower is better)
Translates to: DLRSWVWLWLRCTLE*ELPLEGSGKGISVL
Trigger: GAGAACGGAGATGCCCTTTCCCGAACCCTCCAGGGGAAGCTCCCACTCCAAAGTGCACCGAAGCCACAGCCATACCCAGGACCGGAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR TCA 90 bp ACTCGCGTCTTGCTGTGTGACCGAGACTTCCCGTGGGACTTGCGGTaGGTCCGGCTCTTTTTACTCCTTCCACTGTGGTGGGCGGAGGAC +
Preference number: 1 (lower is better)
Translates to: TRVLLCDRDFPWDLR*VRLFLLLPLWWAED
Trigger: GTCCTCCGCCCACCACAGTGGAAGGAGTAAAAAGAGCCGGACTCACCGCAAGTCCCACGGGAAGTCTCGGTCACACAGCAAGACGCGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR GCA 90 bp CAGTCCTTGGCGGACTTCCTCTGCAGGGTGGAGGCATGCATGCTGTaGACGTCTTCTCGGCAGCAGTGGCAAGAGTCGCAGTGCTTTCTG +
Preference number: 1 (lower is better)
Translates to: QSLADFLCRVEACML*TSSRQQWQESQCFL
Trigger: CAGAAAGCACTGCGACTCTTGCCACTGCTGCCGAGAAGACGTGCACAGCATGCATGCCTCCACCCTGCAGAGGAAGTCCGCCAAGGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR GCA 90 bp CTTTGCAGTCCTTGGCGGACTTCCTCTGCAGGGTGGAGGCATGCATaGTGTGCACGTCTTCTCGGCAGCAGTGGCAAGAGTCGCAGTGCT +
Preference number: 1 (lower is better)
Translates to: LCSPWRTSSAGWRHA*CARLLGSSGKSRSA
Trigger: AGCACTGCGACTCTTGCCACTGCTGCCGAGAAGACGTGCACAGCATGCATGCCTCCACCCTGCAGAGGAAGTCCGCCAAGGACTGCAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR GCA 90 bp TGGACACTCGCGTCTTGCTGTGTGACCGAGACTTCCCGTGGGACTTaGGGTGAGTCCGGCTCTTTTTACTCCTTCCACTGTGGTGGGCGG +
Preference number: 1 (lower is better)
Translates to: WTLASCCVTETSRGT*GESGSFYSFHCGGR
Trigger: CCGCCCACCACAGTGGAAGGAGTAAAAAGAGCCGGACTCACCGCAAGTCCCACGGGAAGTCTCGGTCACACAGCAAGACGCGAGTGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CCA 90 bp GGCAGTAAGGGTCTTTGCAGTCCTTGGCGGACTTCCTCTGCAGGGTaGAGGCATGCATGCTGTGCACGTCTTCTCGGCAGCAGTGGCAAG +
Preference number: 1 (lower is better)
Translates to: GSKGLCSPWRTSSAG*RHACCARLLGSSGK
Trigger: CTTGCCACTGCTGCCGAGAAGACGTGCACAGCATGCATGCCTCCACCCTGCAGAGGAAGTCCGCCAAGGACTGCAAAGACCCTTACTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR TCA 90 bp ATTTCTCAGCTTCGCTGGTCGGGGGATCCGTACTGGCGCGGAAGTTaGAGGTTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGAT +
Preference number: 1 (lower is better)
Translates to: ISQLRWSGDPYWRGS*RLDQLRHGLDSKQD
Trigger: ATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAACTTCCGCGCCAGTACGGATCCCCCGACCAGCGAAGCTGAGAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR CCA 90 bp GGGTATGGCTGTGGCTTCGGTGCACTTTGGAGTGGGAGCTTCCCCTaGAGGGTTCGGGAAAGGGCATCTCCGTTCTCCTTTTGGCCAGTT +
Preference number: 1 (lower is better)
Translates to: GYGCGFGALWSGSFP*RVRERASPFSFWPV
Trigger: AACTGGCCAAAAGGAGAACGGAGATGCCCTTTCCCGAACCCTCCAGGGGAAGCTCCCACTCCAAAGTGCACCGAAGCCACAGCCATACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR TCA 90 bp CGAGCCATCCGAAGGATCTCCTTTGGACACTCGCGTCTTGCTGTGTaGCCGAGACTTCCCGTGGGACTTGCGGTGAGTCCGGCTCTTTTT +
Preference number: 1 (lower is better)
Translates to: RAIRRISFGHSRLAV*PRLPVGLAVSPALF
Trigger: AAAAAGAGCCGGACTCACCGCAAGTCCCACGGGAAGTCTCGGTCACACAGCAAGACGCGAGTGTCCAAAGGAGATCCTTCGGATGGCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR TCA 90 bp GTCATCTTGGCTGCAGCCTTCAGCCAGGTCTTCCGGAGTCCCGAGTaGAGAAGCGCCCAGGGGACCTTTGGAGTTATCCATAGACCTGGA +
Preference number: 1 (lower is better)
Translates to: VILAAAFSQVFRSPE*RSAQGTFGVIHRPG
Trigger: TCCAGGTCTATGGATAACTCCAAAGGTCCCCTGGGCGCTTCTTCACTCGGGACTCCGGAAGACCTGGCTGAAGGCTGCAGCCAAGATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR GCA 90 bp TGCATGCTGTGCACGTCTTCTCGGCAGCAGTGGCAAGAGTCGCAGTaGTTTCTGGGTAATGTCCTTTCCCTGACGCAGCCTGAGGCAGAG +
Preference number: 1 (lower is better)
Translates to: CMLCTSSRQQWQESQ*FLGNVLSLTQPEAE
Trigger: CTCTGCCTCAGGCTGCGTCAGGGAAAGGACATTACCCAGAAAGCACTGCGACTCTTGCCACTGCTGCCGAGAAGACGTGCACAGCATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CCA 90 bp TCTCACCGGGGATATCCAGATGCGAGCCATCCGAAGGATCTCCTTTaGACACTCGCGTCTTGCTGTGTGACCGAGACTTCCCGTGGGACT +
Preference number: 1 (lower is better)
Translates to: SHRGYPDASHPKDLL*TLASCCVTETSRGT
Trigger: AGTCCCACGGGAAGTCTCGGTCACACAGCAAGACGCGAGTGTCCAAAGGAGATCCTTCGGATGGCTCGCATCTGGATATCCCCGGTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CCA 90 bp TCCACCGTGATGCTGCTGCTATCCATGCTGTCCAGCCGGGCTGAGTaGGTGGCTCTCTGGTTGCTGCTGCTATCAGTTTCTTTTGGGGTG +
Preference number: 1 (lower is better)
Translates to: STVMLLLSMLSSRAE*VALWLLLLSVSFGV
Trigger: CACCCCAAAAGAAACTGATAGCAGCAGCAACCAGAGAGCCACCCACTCAGCCCGGCTGGACAGCATGGATAGCAGCAGCATCACGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR TCA 90 bp ACTGTCCACCGTGATGCTGCTGCTATCCATGCTGTCCAGCCGGGCTaGGTGGGTGGCTCTCTGGTTGCTGCTGCTATCAGTTTCTTTTGG +
Preference number: 1 (lower is better)
Translates to: TVHRDAAAIHAVQPG*VGGSLVAAAISFFW
Trigger: CCAAAAGAAACTGATAGCAGCAGCAACCAGAGAGCCACCCACTCAGCCCGGCTGGACAGCATGGATAGCAGCAGCATCACGGTGGACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CCA 90 bp CGTACTGGCGCGGAAGTTGAAGGTTGGACCAGCTCCGCCATGGGCTaGACTCAAAGCAGGATTCTGACGGCGGTTGCTTTCAACAATGCT +
Preference number: 1 (lower is better)
Translates to: RTGAEVEGWTSSAMG*TQSRILTAVAFNNA
Trigger: AGCATTGTTGAAAGCAACCGCCGTCAGAATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAACTTCCGCGCCAGTACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR TCA 90 bp TTACTCCTTCCACTGTGGTGGGCGGAGGACCCGGCTTTGCTCCGGTaGGCTTTTTCTTCTTCAAGTTTCTTCATCAGGGCAGTGTGCCTC +
Preference number: 1 (lower is better)
Translates to: LLLPLWWAEDPALLR*AFSSSSFFIRAVCL
Trigger: GAGGCACACTGCCCTGATGAAGAAACTTGAAGAAGAAAAAGCTCACCGGAGCAAAGCCGGGTCCTCCGCCCACCACAGTGGAAGGAGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR GCA 90 bp AGAGGGTCGCAAAATTCATACTCCCTCTCACCGGGGATATCCAGATaGGAGCCATCCGAAGGATCTCCTTTGGACACTCGCGTCTTGCTG +
Preference number: 1 (lower is better)
Translates to: RGSQNSYSLSPGISR*EPSEGSPLDTRVLL
Trigger: CAGCAAGACGCGAGTGTCCAAAGGAGATCCTTCGGATGGCTCGCATCTGGATATCCCCGGTGAGAGGGAGTATGAATTTTGCGACCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CCA 90 bp GTGGGCGTGTCCTCGTCTCGCAGAGGCCACTCCTCGGGAGGAAACTaGGCAGAGAAATTGGCCAGCTGTTTGGTCTTGTCTTTCTTAAAA +
Preference number: 1 (lower is better)
Translates to: VGVSSSRRGHSSGGN*AEKLASCLVLSFLK
Trigger: TTTTAAGAAAGACAAGACCAAACAGCTGGCCAATTTCTCTGCCCAGTTTCCTCCCGAGGAGTGGCCTCTGCGAGACGAGGACACGCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR GCA 90 bp TCCGTTTGTCTGCTCCTGTCAAGCATGCGTGTGACCCACAGGACCTaGTCTGCCATTGTGCAGCTAACGCTTCAGAAGCATTTTGAGCTG +
Preference number: 1 (lower is better)
Translates to: SVCLLLSSMRVTHRT*SAIVQLTLQKHFEL
Trigger: CAGCTCAAAATGCTTCTGAAGCGTTAGCTGCACAATGGCAGAGCAGGTCCTGTGGGTCACACGCATGCTTGACAGGAGCAGACAAACGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR GCA 90 bp TACTGTCATCAATGTATGATTGGCTCGGTGTTTGGTCATCTTGGCTaGAGCCTTCAGCCAGGTCTTCCGGAGTCCCGAGTGAAGAAGCGC +
Preference number: 1 (lower is better)
Translates to: YCHQCMIGSVFGHLG*SLQPGLPESRVKKR
Trigger: GCGCTTCTTCACTCGGGACTCCGGAAGACCTGGCTGAAGGCTGCAGCCAAGATGACCAAACACCGAGCCAATCATACATTGATGACAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CCA 90 bp GACCAGCCTGGCTCTAACCTTCCATTTCTGCCTTTCCAGAGCCATTaGTACCTCACTCGGAAATACCCTTTTCCTAGTCGGACGGGTGTG +
Preference number: 1 (lower is better)
Translates to: DQPGSNLPFLPFQSH*YLTRKYPFPSRTGV
Trigger: CACACCCGTCCGACTAGGAAAAGGGTATTTCCGAGTGAGGTACCAATGGCTCTGGAAAGGCAGAAATGGAAGGTTAGAGCCAGGCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CCA 90 bp GCAGGCCTTAAAGTACTGTCATCAATGTATGATTGGCTCGGTGTTTaGTCATCTTGGCTGCAGCCTTCAGCCAGGTCTTCCGGAGTCCCG +
Preference number: 1 (lower is better)
Translates to: AGLKVLSSMYDWLGV*SSWLQPSARSSGVP
Trigger: CGGGACTCCGGAAGACCTGGCTGAAGGCTGCAGCCAAGATGACCAAACACCGAGCCAATCATACATTGATGACAGTACTTTAAGGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR TCA 90 bp CAGGACCTGCTCTGCCATTGTGCAGCTAACGCTTCAGAAGCATTTTaGGCTGCCCAGTTGAGCTGCGGAACTTTACCAGTCACTGGTTGT +
Preference number: 1 (lower is better)
Translates to: QDLLCHCAANASEAF*AAQLSCGTLPVTGC
Trigger: ACAACCAGTGACTGGTAAAGTTCCGCAGCTCAACTGGGCAGCTCAAAATGCTTCTGAAGCGTTAGCTGCACAATGGCAGAGCAGGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR TCA 90 bp CTGAATATTTCTTTCCTTTTGTCCAGGCTGCTGGGTTCTGCGCTATaGTGTTGGACAAGGCGGCCATTGGCTAACCCCTCTGCCACACCA +
Preference number: 1 (lower is better)
Translates to: LNISFLLSRLLGSAL*CWTRRPLANPSATP
Trigger: TGGTGTGGCAGAGGGGTTAGCCAATGGCCGCCTTGTCCAACATCATAGCGCAGAACCCAGCAGCCTGGACAAAAGGAAAGAAATATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CCA 90 bp TTGGCCAGTTCGCCAGACACATCCCATTCTGGCGTCATGGGGAAATaGGACTCGATCACGTTCGTGTTGCTATGCATGATGAAGTTGTCC +
Preference number: 1 (lower is better)
Translates to: LASSPDTSHSGVMGK*DSITFVLLCMMKLS
Trigger: GGACAACTTCATCATGCATAGCAACACGAACGTGATCGAGTCCCATTTCCCCATGACGCCAGAATGGGATGTGTCTGGCGAACTGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR TCA 90 bp TGGACTCAAAGCAGGATTCTGACGGCGGTTGCTTTCAACAATGCTTaGTGTGTTGGAAGCCAGGCTCTCCCGAGTGCAGTCCAGATTAGT +
Preference number: 1 (lower is better)
Translates to: WTQSRILTAVAFNNA*CVGSQALPSAVQIS
Trigger: ACTAATCTGGACTGCACTCGGGAGAGCCTGGCTTCCAACACATCAAGCATTGTTGAAAGCAACCGCCGTCAGAATCCTGCTTTGAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR TCA 90 bp GGAAGGTTCCAGTTTCTCACAACGGCCTGGCAGTGTGTCAACGGGTaGCTTTGGGTGAGACTTGAGGAGGGACAAGCTAGATTTGTGATA +
Preference number: 1 (lower is better)
Translates to: GRFQFLTTAWQCVNG*LWVRLEEGQARFVI
Trigger: TATCACAAATCTAGCTTGTCCCTCCTCAAGTCTCACCCAAAGTCACCCGTTGACACACTGCCAGGCCGTTGTGAGAAACTGGAACCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR TCA 90 bp GCCATTGTGCAGCTAACGCTTCAGAAGCATTTTGAGCTGCCCAGTTaGGCTGCGGAACTTTACCAGTCACTGGTTGTTAGCACAAGCTCA +
Preference number: 1 (lower is better)
Translates to: AIVQLTLQKHFELPS*AAELYQSLVVSTSS
Trigger: TGAGCTTGTGCTAACAACCAGTGACTGGTAAAGTTCCGCAGCTCAACTGGGCAGCTCAAAATGCTTCTGAAGCGTTAGCTGCACAATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR GCA 90 bp TCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTaGACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCATACAT +
Preference number: 1 (lower is better)
Translates to: SYVCSDTVSDAGAEV*TSPLLLFGCYRAIH
Trigger: ATGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR GCA 90 bp TCTGGCGTCATGGGGAAATGGGACTCGATCACGTTCGTGTTGCTATaGATGATGAAGTTGTCCCCTTTGTGTTCAATGATGAAGCAGCCC +
Preference number: 1 (lower is better)
Translates to: SGVMGKWDSITFVLL*MMKLSPLCSMMKQP
Trigger: GGGCTGCTTCATCATTGAACACAAAGGGGACAACTTCATCATGCATAGCAACACGAACGTGATCGAGTCCCATTTCCCCATGACGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CCA 90 bp AGCATTTTGAGCTGCCCAGTTGAGCTGCGGAACTTTACCAGTCACTaGTTGTTAGCACAAGCTCAGAATGCTACCTCTCCCAAATGGCCT +
Preference number: 1 (lower is better)
Translates to: SILSCPVELRNFTSH*LLAQAQNATSPKWP
Trigger: AGGCCATTTGGGAGAGGTAGCATTCTGAGCTTGTGCTAACAACCAGTGACTGGTAAAGTTCCGCAGCTCAACTGGGCAGCTCAAAATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CCA 90 bp AACACCACTTCTTGTGTCTACTGTGGTCTGCGCTACACTGCTAGTTaGGTGTGGGACTGGTCTGTGGGAAAGGAGAAAGCAGATGTCAAA +
Preference number: 1 (lower is better)
Translates to: NTTSCVYCGLRYTAS*VWDWSVGKEKADVK
Trigger: TTTGACATCTGCTTTCTCCTTTCCCACAGACCAGTCCCACACCCAACTAGCAGTGTAGCGCAGACCACAGTAGACACAAGAAGTGGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CCA 90 bp TTCCTCTCCCGTACCAGTGTGTTTAGGGTATGCCGTAGAATTTCTTaGCTTGGGGTTGGAACACCTCTCCTGTTTCCACGCCTTCACAAT +
Preference number: 1 (lower is better)
Translates to: FLSRTSVFRVCRRIS*LGVGTPLLFPRLHN
Trigger: ATTGTGAAGGCGTGGAAACAGGAGAGGTGTTCCAACCCCAAGCCAAGAAATTCTACGGCATACCCTAAACACACTGGTACGGGAGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CCA 90 bp AAAGTACTGTCATCAATGTATGATTGGCTCGGTGTTTGGTCATCTTaGCTGCAGCCTTCAGCCAGGTCTTCCGGAGTCCCGAGTGAAGAA +
Preference number: 1 (lower is better)
Translates to: KVLSSMYDWLGVWSS*LQPSARSSGVPSEE
Trigger: TTCTTCACTCGGGACTCCGGAAGACCTGGCTGAAGGCTGCAGCCAAGATGACCAAACACCGAGCCAATCATACATTGATGACAGTACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CCA 90 bp CCAATCGTTTGCGCAGGCCTTAAAGTACTGTCATCAATGTATGATTaGCTCGGTGTTTGGTCATCTTGGCTGCAGCCTTCAGCCAGGTCT +
Preference number: 1 (lower is better)
Translates to: PIVCAGLKVLSSMYD*LGVWSSWLQPSARS
Trigger: AGACCTGGCTGAAGGCTGCAGCCAAGATGACCAAACACCGAGCCAATCATACATTGATGACAGTACTTTAAGGCCTGCGCAAACGATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR TCA 90 bp AAGTGTCATGGTCCTCCTTATTCTTCCCTAAAGGGGACGGTGCTGTaGGTACGGTCTCACTCGAGGTGTTGCACTGAAAATAGTCATCCA +
Preference number: 1 (lower is better)
Translates to: KCHGPPYSSLKGTVL*VRSHSRCCTENSHP
Trigger: TGGATGACTATTTTCAGTGCAACACCTCGAGTGAGACCGTACTCACAGCACCGTCCCCTTTAGGGAAGAATAAGGAGGACCATGACACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR GCA 90 bp TGCCCTAGCCTACTTAGCAGCACAGCTCAAGTAACCCCCAACCTGTaGTTGAGATGTTTGTCTTTGCAGAGATGTAAACATCAGGCCCAA +
Preference number: 1 (lower is better)
Translates to: CPSLLSSTAQVTPNL*LRCLSLQRCKHQAQ
Trigger: TTGGGCCTGATGTTTACATCTCTGCAAAGACAAACATCTCAAGCACAGGTTGGGGGTTACTTGAGCTGTGCTGCTAAGTAGGCTAGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR GCA 90 bp GACCCTAATGTAATCGTCACAGTCAGCCACGCAGAGAAAGACACCTaGAGAGCCATGATCCCTTGGAACTTGGAGGGTCAAATTGAATTC +
Preference number: 1 (lower is better)
Translates to: DPNVIVTVSHAEKDT*RAMIPWNLEGQIEF
Trigger: GAATTCAATTTGACCCTCCAAGTTCCAAGGGATCATGGCTCTGCAGGTGTCTTTCTCTGCGTGGCTGACTGTGACGATTACATTAGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CCA 90 bp ACAGGAACCCAACGAGAAACTGTAAACAAAGGTGGATGTCTGGACTaGCCTTTGACGACAGTGGTATTGGTGTGGACTTGTTCATCTCGC +
Preference number: 1 (lower is better)
Translates to: TGTQRETVNKGGCLD*PLTTVVLVWTCSSR
Trigger: GCGAGATGAACAAGTCCACACCAATACCACTGTCGTCAAAGGCCAGTCCAGACATCCACCTTTGTTTACAGTTTCTCGTTGGGTTCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CCA 90 bp GTGCACAATACTACACAGTATTCTGCTCTTCCAATGTGGAAACAGTaGTGGTGGAATAGGTATCTAGGTGGGAGGAGGAGACAAGGAGGC +
Preference number: 1 (lower is better)
Translates to: VHNTTQYSALPMWKQ*WWNRYLGGRRRQGG
Trigger: GCCTCCTTGTCTCCTCCTCCCACCTAGATACCTATTCCACCACCACTGTTTCCACATTGGAAGAGCAGAATACTGTGTAGTATTGTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CCA 90 bp CTGGCATGCGTGCACAATACTACACAGTATTCTGCTCTTCCAATGTaGAAACAGTGGTGGTGGAATAGGTATCTAGGTGGGAGGAGGAGA +
Preference number: 1 (lower is better)
Translates to: LACVHNTTQYSALPM*KQWWWNRYLGGRRR
Trigger: TCTCCTCCTCCCACCTAGATACCTATTCCACCACCACTGTTTCCACATTGGAAGAGCAGAATACTGTGTAGTATTGTGCACGCATGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CCA 90 bp CAGTACCTACAGATGTATGCAGTGCTTCTCAGAAAACAGGGACTTTaGCAGAAGCGCCTTTCCTGTAGGACTGAAGAGCAATGGTTAGTG +
Preference number: 1 (lower is better)
Translates to: QYLQMYAVLLRKQGL*QKRLSCRTEEQWLV
Trigger: CACTAACCATTGCTCTTCAGTCCTACAGGAAAGGCGCTTCTGCCAAAGTCCCTGTTTTCTGAGAAGCACTGCATACATCTGTAGGTACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CCA 90 bp ACTGTGGTCTGCGCTACACTGCTAGTTGGGTGTGGGACTGGTCTGTaGGAAAGGAGAAAGCAGATGTCAAAGACCTTCTATCTCATAATT +
Preference number: 1 (lower is better)
Translates to: TVVCATLLVGCGTGL*ERRKQMSKTFYLII
Trigger: AATTATGAGATAGAAGGTCTTTGACATCTGCTTTCTCCTTTCCCACAGACCAGTCCCACACCCAACTAGCAGTGTAGCGCAGACCACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CCA 90 bp CACAATACTACACAGTATTCTGCTCTTCCAATGTGGAAACAGTGGTaGTGGAATAGGTATCTAGGTGGGAGGAGGAGACAAGGAGGCAGA +
Preference number: 1 (lower is better)
Translates to: HNTTQYSALPMWKQW*WNRYLGGRRRQGGR
Trigger: TCTGCCTCCTTGTCTCCTCCTCCCACCTAGATACCTATTCCACCACCACTGTTTCCACATTGGAAGAGCAGAATACTGTGTAGTATTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR GCA 90 bp CACCATCTTGATGAGACCATCTTAGACACATGCGCATATCCTATCTaGCATGTGCTTCCCACCACCAATGCTTCCTCTATTCAAGAATCC +
Preference number: 1 (lower is better)
Translates to: HHLDETILDTCAYPI*HVLPTTNASSIQES
Trigger: GGATTCTTGAATAGAGGAAGCATTGGTGGTGGGAAGCACATGGCAGATAGGATATGCGCATGTGTCTAAGATGGTCTCATCAAGATGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CCA 90 bp CGTAGTTACGTCCTCTCCTGTTCACAGGGCACTCGGTTCTTCCAATaGCTACGTTCAGAGGGTCAGAGACTAATGTATTGTTTTAATGGT +
Preference number: 1 (lower is better)
Translates to: RSYVLSCSQGTRFFQ*LRSEGQRLMYCFNG
Trigger: ACCATTAAAACAATACATTAGTCTCTGACCCTCTGAACGTAGCCATTGGAAGAACCGAGTGCCCTGTGAACAGGAGAGGACGTAACTACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CCA 90 bp AAGGCTACAAGCACTAGAAGGTTCCTTGCTGCCACCAACTATTTCTaGAATGCATACCTCTTTGTAGCTGGCAGAAGGAATATGAGCCCT +
Preference number: 1 (lower is better)
Translates to: KATSTRRFLAATNYF*NAYLFVAGRRNMSP
Trigger: AGGGCTCATATTCCTTCTGCCAGCTACAAAGAGGTATGCATTCCAGAAATAGTTGGTGGCAGCAAGGAACCTTCTAGTGCTTGTAGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR GCA 90 bp GAAGATCTGAGGCAGAAGGACAATCATACACTAGTAACAGAAGCTTaGAAGCAGTTGGAAGGTTTCTGTAATTTCTCAGCTTCGCTGGTC +
Preference number: 1 (lower is better)
Translates to: EDLRQKDNHTLVTEA*KQLEGFCNFSASLV
Trigger: GACCAGCGAAGCTGAGAAATTACAGAAACCTTCCAACTGCTTGCAAGCTTCTGTTACTAGTGTATGATTGTCCTTCTGCCTCAGATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR CCA 90 bp GCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTaGCAACTGTATGACATTGAAAAACACATGTTCCACTTACAGTGT +
Preference number: 1 (lower is better)
Translates to: AGWEQHNSVAFQNGN*QLYDIEKHMFHLQC
Trigger: ACACTGTAAGTGGAACATGTGTTTTTCAATGTCATACAGTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR TCA 90 bp GTGTGTTTCTGGACAACTGAGGCATGCCTGGGAGGAAGTAAAGTATaGGATTCAAAGCCAATTGCCTTAAAGCATTTCAACAATGAAGCG +
Preference number: 1 (lower is better)
Translates to: VCFWTTEACLGGSKV*DSKPIALKHFNNEA
Trigger: CGCTTCATTGTTGAAATGCTTTAAGGCAATTGGCTTTGAATCTCATACTTTACTTCCTCCCAGGCATGCCTCAGTTGTCCAGAAACACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR TCA 90 bp CTTGTTCATCTCGCACTTCCTAACTCAATACCAGTAAAGGGGTGCTaGGGTGTTGAGATTCCAAACACCCATACCTCTTTGAATGAAATG +
Preference number: 1 (lower is better)
Translates to: LVHLALPNSIPVKGC*GVEIPNTHTSLNEM
Trigger: CATTTCATTCAAAGAGGTATGGGTGTTTGGAATCTCAACACCTCAGCACCCCTTTACTGGTATTGAGTTAGGAAGTGCGAGATGAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR GCA 90 bp ACTGCCTGTATACAATCACAAGACCGCTCGTTTCCCCTGGAGCTTTaGCGAATTCTAAATTTTGCAACCATTAAGCCTGTGAACAACAAT +
Preference number: 1 (lower is better)
Translates to: TACIQSQDRSFPLEL*RILNFATIKPVNNN
Trigger: ATTGTTGTTCACAGGCTTAATGGTTGCAAAATTTAGAATTCGGCAAAGCTCCAGGGGAAACGAGCGGTCTTGTGATTGTATACAGGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CCA 90 bp TTCTTCCAGAAGGATGAGGTGACAGCTGATTCTTTTTGTATTTCTTaGCAAAGCTCGGACAATAGCAATCCCTTTCCGCCATGTTTAACT +
Preference number: 1 (lower is better)
Translates to: FFQKDEVTADSFCIS*QSSDNSNPFPPCLT
Trigger: AGTTAAACATGGCGGAAAGGGATTGCTATTGTCCGAGCTTTGCCAAGAAATACAAAAAGAATCAGCTGTCACCTCATCCTTCTGGAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CCA 90 bp CTTACTGTTAGTTCTTATGAGGGAGGGAGTAATGAAATAAGTCTGTaGGGTCACAATGAAATAGCCATCCGGAGTCGGATAGATTTTCCT +
Preference number: 1 (lower is better)
Translates to: LTVSSYEGGSNEISL*GHNEIAIRSRIDFP
Trigger: AGGAAAATCTATCCGACTCCGGATGGCTATTTCATTGTGACCCCACAGACTTATTTCATTACTCCCTCCCTCATAAGAACTAACAGTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR GCA 90 bp CGTTTTCAGAAAGAGACATTTAGGAACAGCTGGTGTTTAAATCACTaGTCCTCCACATTCCCTTTCCACTTGTGTTTCCTGAATGTGAAT +
Preference number: 1 (lower is better)
Translates to: RFQKETFRNSWCLNH*SSTFPFHLCFLNVN
Trigger: ATTCACATTCAGGAAACACAAGTGGAAAGGGAATGTGGAGGAGCAGTGATTTAAACACCAGCTGTTCCTAAATGTCTCTTTCTGAAAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR TCA 90 bp GGACGGGCATCAATCAGGGAGAAGCCAGTACCTTTTGCAAACACATaGGATCTAATAATAAAATGTCTCCTGTGTATAATTCATGAAATG +
Preference number: 1 (lower is better)
Translates to: GRASIREKPVPFANT*DLIIKCLLCIIHEM
Trigger: CATTTCATGAATTATACACAGGAGACATTTTATTATTAGATCTCATGTGTTTGCAAAAGGTACTGGCTTCTCCCTGATTGATGCCCGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR TCA 90 bp TGTATCATAATAATATATAAGTGTGCAAAATGCCGACAGATGTGTTaGCCCTTTAAAGTTGAATGCCTCACAGAGATTCAACCAGACTCA +
Preference number: 1 (lower is better)
Translates to: CIIIIYKCAKCRQMC*PFKVECLTEIQPDS
Trigger: TGAGTCTGGTTGAATCTCTGTGAGGCATTCAACTTTAAAGGGTCAACACATCTGTCGGCATTTTGCACACTTATATATTATTATGATACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp TCTTTTTACTCCTTCCACTGTGGTGGGCGGAGGACCCGGCTTTGCTCCGGTGAGCCCGAGGGATGGTCGTaGGCGTGTCCTCGTCTCGCA +
Preference number: 2 (lower is better)
Translates to: SFYSFHCGGRRTRLCSGEPEGWS*ACPRLA
Trigger: TGCGAGACGAGGACACGCCCACGACCATCCCTCGGG...CTCACCGGAGCAAAGCCGGGTCCTCCGCCCACCACAGTGGAAGGAGTAAAAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR TCA 90 bp CCTCCTCCGCGTTTTTGTTGGCCCCCTCCTCGGAGTCGTCGTCATCAGAGACGTGTAATGTCCTTTCCCTaGCGCAGCCTGAGGCAGAGG +
Preference number: 2 (lower is better)
Translates to: PPPRFCWPPPRSRRHQRRVMSFP*RSLRQR
Trigger: CCTCTGCCTCAGGCTGCGTCAGGGAAAGGACATTAC...ACGTCTCTGATGACGACGACTCCGAGGAGGGGGCCAACAAAAACGCGGAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR TCA 90 bp CCTCCTCCGCGTTTTTGTTGGCCCCCTCCTCGGAGTCGTCGTCATCAGAGACGTCCGTGGGACTTGCGGTaGGTCCGGCTCTTTTTACTC +
Preference number: 2 (lower is better)
Translates to: PPPRFCWPPPRSRRHQRRPWDLR*VRLFLL
Trigger: GAGTAAAAAGAGCCGGACTCACCGCAAGTCCCACGG...ACGTCTCTGATGACGACGACTCCGAGGAGGGGGCCAACAAAAACGCGGAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CAA 90 bp AATTTCTCAGCTTCGCTGGTCGGGGGATCCGTACTGGCGCGGAAGTaGAAGGTTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGA +
Preference number: 2 (lower is better)
Translates to: NFSASLVGGSVLARK*KVGPAPPWAGLKAG
Trigger: TCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAACTTCCGCGCCAGTACGGATCCCCCGACCAGCGAAGCTGAGAAATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR CAA 90 bp CTCTCACCGGGGATATCCAGATGCGAGCCATCCGAAGGATCTCCTTaGGACACTCGCGTCTTGCTGTGTGACCGAGACTTCCCGTGGGAC +
Preference number: 2 (lower is better)
Translates to: LSPGISRCEPSEGSP*DTRVLLCDRDFPWD
Trigger: GTCCCACGGGAAGTCTCGGTCACACAGCAAGACGCGAGTGTCCAAAGGAGATCCTTCGGATGGCTCGCATCTGGATATCCCCGGTGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR GCA 90 bp GGCATGGCTTGGGCCGCGGATGTCCCAAGGGAAGGTTCCAGTTTCTCACAACGGTGCAGGGTGGAGGCATaGATGCTGTGCACGTCTTCT +
Preference number: 2 (lower is better)
Translates to: GMAWAADVPREGSSFSQRCRVEA*MLCTSS
Trigger: AGAAGACGTGCACAGCATGCATGCCTCCACCCTGCA...CCGTTGTGAGAAACTGGAACCTTCCCTTGGGACATCCGCGGCCCAAGCCATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CCA 90 bp GCGGGAGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCGCGGAAGTTGAAGGTTaGACCAGCTCCGCCATGGGC +
Preference number: 2 (lower is better)
Translates to: AGAEVCTSPLLLFGCYRAAEVEG*TSSAMG
Trigger: GCCCATGGCGGAGCTGGTCCAACCTTCAACTTCCGC...GGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCTCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR CAA 90 bp GAGCTTCCCCTGGAGGGTTCGGGAAAGGGCATCTCCGTTCTCCTTTaGGCCAGTTCGCCAGACACATCCCATTCTGGCGTCATGGGGAAA +
Preference number: 2 (lower is better)
Translates to: ELPLEGSGKGISVLL*ASSPDTSHSGVMGK
Trigger: TTTCCCCATGACGCCAGAATGGGATGTGTCTGGCGAACTGGCCAAAAGGAGAACGGAGATGCCCTTTCCCGAACCCTCCAGGGGAAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CAA 90 bp GCCAGGTCTTCCGGAGTCCCGAGTGAAGAAGCGCCCAGGGGACCTTaGGAGTTATCCATAGACCTGGATCTCTCCTTGGCCTTGTTGGAC +
Preference number: 2 (lower is better)
Translates to: ARSSGVPSEEAPRGP*ELSIDLDLSLALLD
Trigger: GTCCAACAAGGCCAAGGAGAGATCCAGGTCTATGGATAACTCCAAAGGTCCCCTGGGCGCTTCTTCACTCGGGACTCCGGAAGACCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR TCA 90 bp CCGCGTTTTTGTTGGCCCCCTCCTCGGAGTCGTCGTCATCAGAGACGTTGTAATTCGCGTCTTGCTGTGTaGCCGAGACTTCCCGTGGGA +
Preference number: 2 (lower is better)
Translates to: PRFCWPPPRSRRHQRRCNSRLAV*PRLPVG
Trigger: TCCCACGGGAAGTCTCGGTCACACAGCAAGACGCGA...ATTACAACGTCTCTGATGACGACGACTCCGAGGAGGGGGCCAACAAAAACGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR GCA 90 bp AATCCACTGTCCACCGTGATGCTGCTGCTATCCATGCTGTCCAGCCGGGCTGAGGGCAGTAAGGGTCTTTaGAGTCCTTGGCGGACTTCC +
Preference number: 2 (lower is better)
Translates to: NPLSTVMLLLSMLSSRAEGSKGL*SPWRTS
Trigger: GGAAGTCCGCCAAGGACTGCAAAGACCCTTACTGCC...CTCAGCCCGGCTGGACAGCATGGATAGCAGCAGCATCACGGTGGACAGTGGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CCA 90 bp CCGAGACTTCCCGTGGGACTTGCGGTGAGTCCGGCTCTTTTTACTCCTTCCACTGGTCTTTGCAGTCCTTaGCGGACTTCCTCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: PRLPVGLAVSPALFTPSTGLCSP*RTSSAG
Trigger: CCCTGCAGAGGAAGTCCGCCAAGGACTGCAAAGACC...AGTGGAAGGAGTAAAAAGAGCCGGACTCACCGCAAGTCCCACGGGAAGTCTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CAA 90 bp GAGAGAGCTGCCACTGTGTTTCTGGGGGATCTTGAGTCACTCCGTTaGTCTGCTCCTGTCAAGCATGCGTGTGACCCACAGGACCTGCTC +
Preference number: 2 (lower is better)
Translates to: ERAATVFLGDLESLR*SAPVKHACDPQDLL
Trigger: GAGCAGGTCCTGTGGGTCACACGCATGCTTGACAGGAGCAGACAAACGGAGTGACTCAAGATCCCCCAGAAACACAGTGGCAGCTCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp AAGCCGTCACCACGGAGCCCCTCTGCATTGCTGACGCAAGCCAAGGGGACGGGCAACTTTACCAGTCACTaGTTGTTAGCACAAGCTCAG +
Preference number: 2 (lower is better)
Translates to: KPSPRSPSALLTQAKGTGNFTSH*LLAQAQ
Trigger: CTGAGCTTGTGCTAACAACCAGTGACTGGTAAAGTT...GCCCGTCCCCTTGGCTTGCGTCAGCAATGCAGAGGGGCTCCGTGGTGACGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp CGTGGCCCCATTCCCTATAGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCCAATGCTTGATGTGTTaGAAGCCAGGCTCTCCCGAG +
Preference number: 2 (lower is better)
Translates to: RGPIPYRPAGSNTTLWHFQCLMC*KPGSPE
Trigger: CTCGGGAGAGCCTGGCTTCCAACACATCAAGCATTG...GAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCTATAGGGAATGGGGCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp CTGGATCTCCGGTCCTGGGTATGGCTGTGGCTTCGGTGCACTTTGGAGTGGGAGTTCTTGGCTTGGGGTTaGAACACCTCTCCTGTTTCC +
Preference number: 2 (lower is better)
Translates to: LDLRSWVWLWLRCTLEWEFLAWG*NTSPVS
Trigger: GGAAACAGGAGAGGTGTTCCAACCCCAAGCCAAGAA...CTCCCACTCCAAAGTGCACCGAAGCCACAGCCATACCCAGGACCGGAGATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CCA 90 bp AGGAGGGCAGTAAGGGTCTTTGCAGTCCTTGGCGGACTTCCTCTGCAGGGTGGATATGGTTCCTGGTTGTaGCGAGGTGCACTGAGACCT +
Preference number: 2 (lower is better)
Translates to: RRAVRVFAVLGGLPLQGGYGSWL*RGALRP
Trigger: AGGTCTCAGTGCACCTCGCCACAACCAGGAACCATA...TCCACCCTGCAGAGGAAGTCCGCCAAGGACTGCAAAGACCCTTACTGCCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR TCA 90 bp GCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACTGTACTGGCGCGGAAGTTaGAGGTTGGACCAGCTCCGC +
Preference number: 2 (lower is better)
Translates to: AGWEQHNSVAFQNGNWQLYWRGS*RLDQLR
Trigger: GCGGAGCTGGTCCAACCTTCAACTTCCGCGCCAGTA...CAGTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR TCA 90 bp GGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACTTACTGGCGCGGAAGTTaGAGGTTGGACCAGCTCCGC +
Preference number: 2 (lower is better)
Translates to: GRLGATQLCGISEWKLATYWRGS*RLDQLR
Trigger: GCGGAGCTGGTCCAACCTTCAACTTCCGCGCCAGTA...AGTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR GCA 90 bp AAGCCGTCACCACGGAGCCCCTCTGCATTGCTGACGCAAGCCAAGGGGACGGGCCCCTTTAAAGTTGAATaGCTCACAGAGATTCAACCA +
Preference number: 2 (lower is better)
Translates to: KPSPRSPSALLTQAKGTGPFKVE*LTEIQP
Trigger: TGGTTGAATCTCTGTGAGGCATTCAACTTTAAAGGG...GCCCGTCCCCTTGGCTTGCGTCAGCAATGCAGAGGGGCTCCGTGGTGACGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR GCA 90 bp AATCCACTGTCCACCGTGATGCTGCTGCTATCCATGCTGTCCAGCCGGGCTGAGGGGTGGCTCTCTGGTTaGTGCTGCTATCAGTTTCTT +
Preference number: 2 (lower is better)
Translates to: NPLSTVMLLLSMLSSRAEGWLSG*CCYQFL
Trigger: AAGAAACTGATAGCAGCAGCAACCAGAGAGCCACCC...CTCAGCCCGGCTGGACAGCATGGATAGCAGCAGCATCACGGTGGACAGTGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CCA 90 bp AGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACGGACCAGCTCCGCCATaGGCTGGACTCAAAGCAGGA +
Preference number: 2 (lower is better)
Translates to: RPAGSNTTLWHFRMEIGNGPAPP*AGLKAG
Trigger: TCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCC...GTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp CCGCGTTTTTGTTGGCCCCCTCCTCGGAGTCGTCGTCATCAGAGACGTTGTAATACTTCCTCTGCAGGGTaGAGGCATGCATGCTGTGCA +
Preference number: 2 (lower is better)
Translates to: PRFCWPPPRSRRHQRRCNTSSAG*RHACCA
Trigger: TGCACAGCATGCATGCCTCCACCCTGCAGAGGAAGT...ATTACAACGTCTCTGATGACGACGACTCCGAGGAGGGGGCCAACAAAAACGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CAA 90 bp AGGAGAGAGAGAGAGAGAGAGCTGCCACTGTGTTTCTGGGGGATCTaGAGTCACTCCGTTTGTCTGCTCCTGTCAAGCATGCGTGTGACC +
Preference number: 2 (lower is better)
Translates to: RRERERELPLCFWGI*SHSVCLLLSSMRVT
Trigger: GGTCACACGCATGCTTGACAGGAGCAGACAAACGGAGTGACTCAAGATCCCCCAGAAACACAGTGGCAGCTCTCTCTCTCTCTCTCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CAA 90 bp GGACCTTTGGAGTTATCCATAGACCTGGATCTCTCCTTGGCCTTGTaGGACCTCTCATTCCTGGATCTCCGGTCCTGGGTATGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: GPLELSIDLDLSLAL*DLSFLDLRSWVWLW
Trigger: CCACAGCCATACCCAGGACCGGAGATCCAGGAATGAGAGGTCCAACAAGGCCAAGGAGAGATCCAGGTCTATGGATAACTCCAAAGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CAA 90 bp AGGGGACCTTTGGAGTTATCCATAGACCTGGATCTCTCCTTGGCCTaGTTGGACCTCTCATTCCTGGATCTCCGGTCCTGGGTATGGCTG +
Preference number: 2 (lower is better)
Translates to: RGPLELSIDLDLSLA*LDLSFLDLRSWVWL
Trigger: CAGCCATACCCAGGACCGGAGATCCAGGAATGAGAGGTCCAACAAGGCCAAGGAGAGATCCAGGTCTATGGATAACTCCAAAGGTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR TCA 90 bp CCGCGTTTTTGTTGGCCCCCTCCTCGGAGTCGTCGTCATCAGAGACGTTGTAATTCTGTGGGGTCACAATaGAATAGCCATCCGGAGTCG +
Preference number: 2 (lower is better)
Translates to: PRFCWPPPRSRRHQRRCNSVGSQ*NSHPES
Trigger: CGACTCCGGATGGCTATTTCATTGTGACCCCACAGA...ATTACAACGTCTCTGATGACGACGACTCCGAGGAGGGGGCCAACAAAAACGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR GCA 90 bp CGACACAGGCATATGGATCATAGAAGCCGTCACCACGGAGCCCCTCTGCATTGCGCACATCTCCCCTACTaGTATTCGGTTGCTACAGAG +
Preference number: 2 (lower is better)
Translates to: RHRHMDHRSRHHGAPLHCAHLPY*YSVATE
Trigger: CTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGC...GCAATGCAGAGGGGCTCCGTGGTGACGGCTTCTATGATCCATATGCCTGTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp TGGGAGCTTCCCCTGGAGGGTTCGGGAAAGGGCATCTCCGTTCTCCTTTTGGCCACCCTCTCGTCCAAGTaGTACCACTTACTGTTAGTT +
Preference number: 2 (lower is better)
Translates to: WELPLEGSGKGISVLLLATLSSK*YHLLLV
Trigger: AACTAACAGTAAGTGGTACCACTTGGACGAGAGGGT...GGCCAAAAGGAGAACGGAGATGCCCTTTCCCGAACCCTCCAGGGGAAGCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CCA 90 bp GCACTGAAAATAGTCATCCACAGCTGTTTTAGCCGGGCAAGGGCTGAGTTCCCCGGCGTCATGGGGAAATaGGACTCGATCACGTTCGTG +
Preference number: 2 (lower is better)
Translates to: ALKIVIHSCFSRARAEFPGVMGK*DSITFV
Trigger: CACGAACGTGATCGAGTCCCATTTCCCCATGACGCC...GGGGAACTCAGCCCTTGCCCGGCTAAAACAGCTGTGGATGACTATTTTCAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CCA 90 bp GCACTGAAAATAGTCATCCACAGCTGTTTTAGCCGGGCAAGGGCTGAGTTCCCCGGTGTTTGGTCATCTTaGCTGCAGCCTTCAGCCAGG +
Preference number: 2 (lower is better)
Translates to: ALKIVIHSCFSRARAEFPGVWSS*LQPSAR
Trigger: CCTGGCTGAAGGCTGCAGCCAAGATGACCAAACACC...GGGGAACTCAGCCCTTGCCCGGCTAAAACAGCTGTGGATGACTATTTTCAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR TCA 90 bp GTTGAAGGTTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTCTGACGGCTTTCAACAATGCTTaGTGTGTTGGAAGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: VEGWTSSAMGWTQSRILTAFNNA*CVGSQA
Trigger: AGCCTGGCTTCCAACACATCAAGCATTGTTGAAAGC...CGTCAGAATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR TCA 90 bp GTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAATACTGGCGCGGAAGTTaGAGGTTGGACCAGCTCCGC +
Preference number: 2 (lower is better)
Translates to: VCRLSYVCSDTVSDAGAEYWRGS*RLDQLR
Trigger: GCGGAGCTGGTCCAACCTTCAACTTCCGCGCCAGTA...TTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR GCA 90 bp CGACACAGGCATATGGATCATAGAAGCCGTCACCACGGAGCCCCTCTGCATTGCTGGACAACTGAGGCATaGCTGGGAGGAAGTAAAGTA +
Preference number: 2 (lower is better)
Translates to: RHRHMDHRSRHHGAPLHCWTTEA*LGGSKV
Trigger: TACTTTACTTCCTCCCAGGCATGCCTCAGTTGTCCA...GCAATGCAGAGGGGCTCCGTGGTGACGGCTTCTATGATCCATATGCCTGTGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR GCA 90 bp CGTGGCCCCATTCCCTATAGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCGATTCTGACGGCGGTTaGTTTCAACAATGCTTGATG +
Preference number: 2 (lower is better)
Translates to: RGPIPYRPAGSNTTLWHFDSDGG*FQQCLM
Trigger: CATCAAGCATTGTTGAAAGCAACCGCCGTCAGAATC...GAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCTATAGGGAATGGGGCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp CCTCCTCCGCGTTTTTGTTGGCCCCCTCCTCGGAGTCGTCGTCATCAGAGACGTAAGGTCAAAGTGTCATaGTCCTCCTTATTCTTCCCT +
Preference number: 2 (lower is better)
Translates to: PPPRFCWPPPRSRRHQRRKVKVS*SSLFFP
Trigger: AGGGAAGAATAAGGAGGACCATGACACTTTGACCTT...ACGTCTCTGATGACGACGACTCCGAGGAGGGGGCCAACAAAAACGCGGAGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CAA 90 bp GAGCTGGAAAAGAGCGAAAACAAACACTCTAACTACGTCCATCCATaGGGACCTCTGACCCACTCTCATGGGCTCCTCCCGCAAGAGTGT +
Preference number: 2 (lower is better)
Translates to: ELEKSENKHSNYVHP*GPLTHSHGLLPQEC
Trigger: ACACTCTTGCGGGAGGAGCCCATGAGAGTGGGTCAGAGGTCCCAATGGATGGACGTAGTTAGAGTGTTTGTTTTCGCTCTTTTCCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CAA 90 bp GGGAAATGGGACTCGATCACGTTCGTGTTGCTATGCATGATGAAGTaGTCCCCTTTGTGTTCAATGATGAAGCAGCCCTCTCTGGGGGCC +
Preference number: 2 (lower is better)
Translates to: GKWDSITFVLLCMMK*SPLCSMMKQPSLGA
Trigger: GGCCCCCAGAGAGGGCTGCTTCATCATTGAACACAAAGGGGACAACTTCATCATGCATAGCAACACGAACGTGATCGAGTCCCATTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR GCA 90 bp AGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCATACAGCGGGAGCAGAAGTGTaGACATCTCCCCTACTGCTA +
Preference number: 2 (lower is better)
Translates to: SRSVHISPTAIRLLQSHTAGAEV*TSPLLL
Trigger: TAGCAGTAGGGGAGATGTGCACACTTCTGCTCCCGC...TGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR GCA 90 bp CCTCCACCAAGGTCAAAGTGTCATGGTCCTCCTTATTCTTCCCTAAAGGGGACGTACTCTCAGGGGTTTTaGCTGGCTCCAGAAGGCTAC +
Preference number: 2 (lower is better)
Translates to: PPPRSKCHGPPYSSLKGTYSQGF*LAPEGY
Trigger: GTAGCCTTCTGGAGCCAGGCAAAACCCCTGAGAGTA...CGTCCCCTTTAGGGAAGAATAAGGAGGACCATGACACTTTGACCTTGGTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CCA 90 bp GAGAGAGCTGCCACTGTGTTTCTGGGGGATCTTGAGTCACTCCGTTTGTCTGCTACTCGGTTCTTCCAATaGCTACGTTCAGAGGGTCAG +
Preference number: 2 (lower is better)
Translates to: ERAATVFLGDLESLRLSATRFFQ*LRSEGQ
Trigger: CTGACCCTCTGAACGTAGCCATTGGAAGAACCGAGT...AGCAGACAAACGGAGTGACTCAAGATCCCCCAGAAACACAGTGGCAGCTCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp CTTTGCAGAGATGTAAACATCAGGCCCAATCGTCGTAAACGTTGCTGTATCGGAGCGGAAGTTGAAGGTTaGACCAGCTCCGCCATGGGC +
Preference number: 2 (lower is better)
Translates to: LCRDVNIRPNRRKRCCIGAEVEG*TSSAMG
Trigger: GCCCATGGCGGAGCTGGTCCAACCTTCAACTTCCGC...TCCGATACAGCAACGTTTACGACGATTGGGCCTGATGTTTACATCTCTGCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR CAA 90 bp GGCCACTCCTCGGGAGGAAACTGGGCAGAGAAATTGGCCAGCTGTTaGGTCTTGTCTTTCTTAAAACTCAGCCGGAATAACTTGAGACCG +
Preference number: 2 (lower is better)
Translates to: GHSSGGNWAEKLASC*VLSFLKLSRNNLRP
Trigger: CGGTCTCAAGTTATTCCGGCTGAGTTTTAAGAAAGACAAGACCAAACAGCTGGCCAATTTCTCTGCCCAGTTTCCTCCCGAGGAGTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CAA 90 bp GACTCGATCACGTTCGTGTTGCTATGCATGATGAAGTTGTCCCCTTaGTGTTCAATGATGAAGCAGCCCTCTCTGGGGGCCCTGGTTAGA +
Preference number: 2 (lower is better)
Translates to: DSITFVLLCMMKLSP*CSMMKQPSLGALVR
Trigger: TCTAACCAGGGCCCCCAGAGAGGGCTGCTTCATCATTGAACACAAAGGGGACAACTTCATCATGCATAGCAACACGAACGTGATCGAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR TCA 90 bp CAGTTGGAAGGTTTCTGTAATTTCTCAGCTTCGCTGGTCGGGGGATCCGTACTGCCCCCAACCTGTGCTTaGGATGTTTGTCTTTGCAGA +
Preference number: 2 (lower is better)
Translates to: QLEGFCNFSASLVGGSVLPPTCA*DVCLCR
Trigger: TCTGCAAAGACAAACATCTCAAGCACAGGTTGGGGG...CAGTACGGATCCCCCGACCAGCGAAGCTGAGAAATTACAGAAACCTTCCAACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR TCA 90 bp AACACAAAGCTGTGGTTCCAGTGGAGAATAATCTTGGCAAAGCCCAGAGAGGGCTCCTGCTCCAGTATCTaGTTCATCCCTCCGGGTCAT +
Preference number: 2 (lower is better)
Translates to: NTKLWFQWRIILAKPREGSCSSI*FIPPGH
Trigger: ATGACCCGGAGGGATGAATCAGATACTGGAGCAGGA...GCCCTCTCTGGGCTTTGCCAAGATTATTCTCCACTGGAACCACAGCTTTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR TCA 90 bp GGCAGGTGCACAAGGACCAGCCTGGCTCTAACCTTCCATTTCTGCCTTTCCAGAACCATGGCCTACTGCTaGAAAGCGTTTGAAACATTG +
Preference number: 2 (lower is better)
Translates to: GRCTRTSLALTFHFCLSRTMAYC*KAFETL
Trigger: CAATGTTTCAAACGCTTTTCAGCAGTAGGCCATGGT...TCTGGAAAGGCAGAAATGGAAGGTTAGAGCCAGGCTGGTCCTTGTGCACCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR TCA 90 bp TTCACAAGTGAAGCCAGCAATGAGCCGTTAAAGGCCTCTGACTGCCTGTATACATCCCAAATGGCCTGGTaGGAACTGTGCCCATCACTG +
Preference number: 2 (lower is better)
Translates to: FTSEASNEPLKASDCLYTSQMAW*ELCPSL
Trigger: CAGTGATGGGCACAGTTCTCACCAGGCCATTTGGGA...TGTATACAGGCAGTCAGAGGCCTTTAACGGCTCATTGCTGGCTTCACTTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR GCA 90 bp CCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCGCACATCTCCCCTACTaGTATTCGGTTGCTACAGAG +
Preference number: 2 (lower is better)
Translates to: PMCAQIQLVTREQKCAHLAHLPY*YSVATE
Trigger: CTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGC...GAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR GCA 90 bp GTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCATACATGTGAAAAGGCGGGAGCAGAAGTGTaGACATCTCCCCTACTGCTA +
Preference number: 2 (lower is better)
Translates to: VHISPTAIRLLQSHTCEKAGAEV*TSPLLL
Trigger: TAGCAGTAGGGGAGATGTGCACACTTCTGCTCCCGC...CTTTTCACATGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR GCA 90 bp GGCTCTAACCTTCCATTTCTGCCTTTCCAGAGCCATTGGTACCTCACTCGGAAAGCTGCCCAGTTGAGCTaGGGAACTTTACCAGTCACT +
Preference number: 2 (lower is better)
Translates to: GSNLPFLPFQSHWYLTRKAAQLS*GTLPVT
Trigger: AGTGACTGGTAAAGTTCCGCAGCTCAACTGGGCAGC...TTTCCGAGTGAGGTACCAATGGCTCTGGAAAGGCAGAAATGGAAGGTTAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp CTGATTCATCCCTCCGGGTCATCCACGCACCCTCCTCCAGCACTCAGTGCTGTGAGCAACACAACTCTGTaGCATTTCAGAATGGAAATT +
Preference number: 2 (lower is better)
Translates to: LIHPSGSSTHPPPALSAVSNTTL*HFRMEI
Trigger: AATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCT...CACAGCACTGAGTGCTGGAGGAGGGTGCGTGGATGACCCGGAGGGATGAATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp GACACACATGCAACACCATGGCCTACTGCTGAAAAGCGTTTGAAACATTGCTTTGCGGAAGTTGAAGGTTaGACCAGCTCCGCCATGGGC +
Preference number: 2 (lower is better)
Translates to: DTHATPWPTAEKRLKHCFAEVEG*TSSAMG
Trigger: GCCCATGGCGGAGCTGGTCCAACCTTCAACTTCCGC...AAAGCAATGTTTCAAACGCTTTTCAGCAGTAGGCCATGGTGTTGCATGTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp GGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAACATTTTTGGCTTCGGTGCACTTTaGAGTGGGAGCTTCCCCTGG +
Preference number: 2 (lower is better)
Translates to: GTNPPVQISDLYSCRNIFGFGAL*SGSFPW
Trigger: CCAGGGGAAGCTCCCACTCCAAAGTGCACCGAAGCC...AAAAATGTTTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CAA 90 bp ATTTTGAGCTGCCCAGTTGAGCTGCGGAACTTTACCAGTCACTGGTaGTTAGCACAAGCTCAGAATGCTACCTCTCCCAAATGGCCTGGT +
Preference number: 2 (lower is better)
Translates to: ILSCPVELRNFTSHW*LAQAQNATSPKWPG
Trigger: ACCAGGCCATTTGGGAGAGGTAGCATTCTGAGCTTGTGCTAACAACCAGTGACTGGTAAAGTTCCGCAGCTCAACTGGGCAGCTCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CAA 90 bp TCTCCCGTACCAGTGTGTTTAGGGTATGCCGTAGAATTTCTTGGCTaGGGGTTGGAACACCTCTCCTGTTTCCACGCCTTCACAATTTCC +
Preference number: 2 (lower is better)
Translates to: SPVPVCLGYAVEFLG*GLEHLSCFHAFTIS
Trigger: GGAAATTGTGAAGGCGTGGAAACAGGAGAGGTGTTCCAACCCCAAGCCAAGAAATTCTACGGCATACCCTAAACACACTGGTACGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR GCA 90 bp GAGAGAGCTGCCACTGTGTTTCTGGGGGATCTTGAGTCACTCCGTTTGTCTGCTCTACTGCTATTCGGTTaGTACAGAGCCATACATGTG +
Preference number: 2 (lower is better)
Translates to: ERAATVFLGDLESLRLSALLLFG*YRAIHV
Trigger: CACATGTATGGCTCTGTAGCAACCGAATAGCAGTAG...AGCAGACAAACGGAGTGACTCAAGATCCCCCAGAAACACAGTGGCAGCTCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR GCA 90 bp GACACATGCGCATATCCTATCTGCCATGTGCTTCCCACCACCAATGCTTCCTCTTGGACAACTGAGGCATaGCTGGGAGGAAGTAAAGTA +
Preference number: 2 (lower is better)
Translates to: DTCAYPICHVLPTTNASSWTTEA*LGGSKV
Trigger: TACTTTACTTCCTCCCAGGCATGCCTCAGTTGTCCA...AGAGGAAGCATTGGTGGTGGGAAGCACATGGCAGATAGGATATGCGCATGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR GCA 90 bp GACGCGGGAGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGACTAGTAACAGAAGCTTaGAAGCAGTTGGAAGGTTTC +
Preference number: 2 (lower is better)
Translates to: DAGAEVCTSPLLLFGCYRLVTEA*KQLEGF
Trigger: GAAACCTTCCAACTGCTTGCAAGCTTCTGTTACTAG...TCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCTCCCGCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR GCA 90 bp AAGGTTCCTTGCTGCCACCAACTATTTCTGGAATGCATACCTCTTTGTAGCTGGCGGAGGACCCGGCTTTaGTCCGGTGAGCTTTTTCTT +
Preference number: 2 (lower is better)
Translates to: KVPCCHQLFLECIPLCSWRRTRL*SGELFL
Trigger: AAGAAAAAGCTCACCGGAGCAAAGCCGGGTCCTCCG...CCAGCTACAAAGAGGTATGCATTCCAGAAATAGTTGGTGGCAGCAAGGAACCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CCA 90 bp GGCAGGTGCACAAGGACCAGCCTGGCTCTAACCTTCCATTTCTGCCTTTCCAGAAACTGTAAACAAAGGTaGATGTCTGGACTGGCCTTT +
Preference number: 2 (lower is better)
Translates to: GRCTRTSLALTFHFCLSRNCKQR*MSGLAF
Trigger: AAAGGCCAGTCCAGACATCCACCTTTGTTTACAGTT...TCTGGAAAGGCAGAAATGGAAGGTTAGAGCCAGGCTGGTCCTTGTGCACCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp AGGAGGGCAGTAAGGGTCTTTGCAGTCCTTGGCGGACTTCCTCTGCAGGGTGGAAATGAAATAAGTCTGTaGGGTCACAATGAAATAGCC +
Preference number: 2 (lower is better)
Translates to: RRAVRVFAVLGGLPLQGGNEISL*GHNEIA
Trigger: GGCTATTTCATTGTGACCCCACAGACTTATTTCATT...TCCACCCTGCAGAGGAAGTCCGCCAAGGACTGCAAAGACCCTTACTGCCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CAA 90 bp CCTAGCCTACTTAGCAGCACAGCTCAAGTAACCCCCAACCTGTGCTaGAGATGTTTGTCTTTGCAGAGATGTAAACATCAGGCCCAATCG +
Preference number: 2 (lower is better)
Translates to: PSLLSSTAQVTPNLC*RCLSLQRCKHQAQS
Trigger: CGATTGGGCCTGATGTTTACATCTCTGCAAAGACAAACATCTCAAGCACAGGTTGGGGGTTACTTGAGCTGTGCTGCTAAGTAGGCTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR CAA 90 bp ACCCAACGAGAAACTGTAAACAAAGGTGGATGTCTGGACTGGCCTTaGACGACAGTGGTATTGGTGTGGACTTGTTCATCTCGCACTTCC +
Preference number: 2 (lower is better)
Translates to: TQRETVNKGGCLDWP*TTVVLVWTCSSRTS
Trigger: GGAAGTGCGAGATGAACAAGTCCACACCAATACCACTGTCGTCAAAGGCCAGTCCAGACATCCACCTTTGTTTACAGTTTCTCGTTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR TCA 90 bp AACACAAAGCTGTGGTTCCAGTGGAGAATAATCTTGGCAAAGCCCAGAGAGGGCCCCGAACGTGCCTCCTaGAGTCATTACAAAGTATCT +
Preference number: 2 (lower is better)
Translates to: NTKLWFQWRIILAKPREGPERAS*SHYKVS
Trigger: AGATACTTTGTAATGACTTCAGGAGGCACGTTCGGG...GCCCTCTCTGGGCTTTGCCAAGATTATTCTCCACTGGAACCACAGCTTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR TCA 90 bp TCAGCCCGAGGCCGTGAGAGTCAAGAGTCTCACCATCTTGATGAGACCATCTTATTAAGGAGCCCAGTTTaGCCCAACACAACTTCCAAA +
Preference number: 2 (lower is better)
Translates to: SARGRESQESHHLDETILLRSPV*PNTTSK
Trigger: TTTGGAAGTTGTGTTGGGTCAAACTGGGCTCCTTAA...TAAGATGGTCTCATCAAGATGGTGAGACTCTTGACTCTCACGGCCTCGGGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR TCA 90 bp TATAGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCGCTTTCAACAATGCTTaGTGTGTTGGAAGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: YRPAGSNTTLWHFRMEIGAFNNA*CVGSQA
Trigger: AGCCTGGCTTCCAACACATCAAGCATTGTTGAAAGC...GCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR GCA 90 bp GGCCCAATCGTCGTAAACGTTGCTGTATCGGATGAGACAGAAGATCTGAGGCAGCTACTGCTATTCGGTTaGTACAGAGCCATACATGTG +
Preference number: 2 (lower is better)
Translates to: GPIVVNVAVSDETEDLRQLLLFG*YRAIHV
Trigger: CACATGTATGGCTCTGTAGCAACCGAATAGCAGTAG...CTGCCTCAGATCTTCTGTCTCATCCGATACAGCAACGTTTACGACGATTGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR GCA 90 bp GGCAGGTGCACAAGGACCAGCCTGGCTCTAACCTTCCATTTCTGCCTTTCCAGATTTCCCTATTGGGTGTaGACACATCCTATTTTTGCA +
Preference number: 2 (lower is better)
Translates to: GRCTRTSLALTFHFCLSRFPYWV*THPIFA
Trigger: TGCAAAAATAGGATGTGTGCACACCCAATAGGGAAA...TCTGGAAAGGCAGAAATGGAAGGTTAGAGCCAGGCTGGTCCTTGTGCACCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR GCA 90 bp CTCACTCGAGGTGTTGCACTGAAAATAGTCATCCACAGCTGTTTTAGCCGGGCATTCATCAGGGCAGTGTaGCTCATGACATTTTCCACC +
Preference number: 2 (lower is better)
Translates to: LTRGVALKIVIHSCFSRAFIRAV*LMTFST
Trigger: GGTGGAAAATGTCATGAGGCACACTGCCCTGATGAA...TGCCCGGCTAAAACAGCTGTGGATGACTATTTTCAGTGCAACACCTCGAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR GCA 90 bp GGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAACATTTTTTGGACACTCGCGTCTTaGTGTGTGACCGAGACTTCC +
Preference number: 2 (lower is better)
Translates to: GTNPPVQISDLYSCRNIFWTLAS*CVTETS
Trigger: GGAAGTCTCGGTCACACAGCAAGACGCGAGTGTCCA...AAAAATGTTTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CCA 90 bp TGGGGTTATCACAGAAATGACAGGAACCCAACGAGAAACTGTAAACAAAGGTGGTCACACACAAAGGGCTaGGGTCCCTTCTGCCCAGTT +
Preference number: 2 (lower is better)
Translates to: WGYHRNDRNPTRNCKQRWSHTKG*GPFCPV
Trigger: AACTGGGCAGAAGGGACCCCAGCCCTTTGTGTGTGA...CCACCTTTGTTTACAGTTTCTCGTTGGGTTCCTGTCATTTCTGTGATAACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp CCTCGGAGTCGTCGTCATCAGAGACGTTGTAATAGTCAAAAGAAGCCTCCTGGTTGCCGTAGAATTTCTTaGCTTGGGGTTGGAACACCT +
Preference number: 2 (lower is better)
Translates to: PRSRRHQRRCNSQKKPPGCRRIS*LGVGTP
Trigger: AGGTGTTCCAACCCCAAGCCAAGAAATTCTACGGCA...ACCAGGAGGCTTCTTTTGACTATTACAACGTCTCTGATGACGACGACTCCGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CCA 90 bp GTTCGTGTTGCTATGCATGATGAAGTTGTCCCCTTTGTGTTCAATGATGAAGCAAGGCAGAGGGCGTTATaGTTCCTGGTTGTGGCGAGG +
Preference number: 2 (lower is better)
Translates to: VRVAMHDEVVPFVFNDEARQRAL*FLVVAR
Trigger: CCTCGCCACAACCAGGAACCATAACGCCCTCTGCCT...TGCTTCATCATTGAACACAAAGGGGACAACTTCATCATGCATAGCAACACGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CCA 90 bp AGGTTTCGAGAGAGTTTCCGTCTTATAGGAGAAATTTATAGTGCTTTTGCTTTTTCAGTGGGCGGCACCTaGCAGAGCGGAGGAGGGCAG +
Preference number: 2 (lower is better)
Translates to: RFRESFRLIGEIYSAFAFSVGGT*QSGGGQ
Trigger: CTGCCCTCCTCCGCTCTGCCAGGTGCCGCCCACTGA...AAAAGCAAAAGCACTATAAATTTCTCCTATAAGACGGAAACTCTCTCGAAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CCA 90 bp AAGGTTCCTTGCTGCCACCAACTATTTCTGGAATGCATACCTCTTTGTAGCTGGTGGACCTCTCATTCCTaGATCTCCGGTCCTGGGTAT +
Preference number: 2 (lower is better)
Translates to: KVPCCHQLFLECIPLCSWWTSHS*ISGPGY
Trigger: ATACCCAGGACCGGAGATCCAGGAATGAGAGGTCCA...CCAGCTACAAAGAGGTATGCATTCCAGAAATAGTTGGTGGCAGCAAGGAACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CCA 90 bp GGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAACATTTTTCCAGGAGCCACTGCATaGTGCCCACATCATCTCTGT +
Preference number: 2 (lower is better)
Translates to: GTNPPVQISDLYSCRNIFPGATA*CPHHLC
Trigger: ACAGAGATGATGTGGGCACCATGCAGTGGCTCCTGG...AAAAATGTTTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CAA 90 bp AGGCAGAAGGACAATCATACACTAGTAACAGAAGCTTGCAAGCAGTaGGAAGGTTTCTGTAATTTCTCAGCTTCGCTGGTCGGGGGATCC +
Preference number: 2 (lower is better)
Translates to: RQKDNHTLVTEACKQ*EGFCNFSASLVGGS
Trigger: GGATCCCCCGACCAGCGAAGCTGAGAAATTACAGAAACCTTCCAACTGCTTGCAAGCTTCTGTTACTAGTGTATGATTGTCCTTCTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR CAA 90 bp TCCCATTCTGGCGTCATGGGGAAATGGGACTCGATCACGTTCGTGTaGCTATGCATGATGAAGTTGTCCCCTTTGTGTTCAATGATGAAG +
Preference number: 2 (lower is better)
Translates to: SHSGVMGKWDSITFV*LCMMKLSPLCSMMK
Trigger: CTTCATCATTGAACACAAAGGGGACAACTTCATCATGCATAGCAACACGAACGTGATCGAGTCCCATTTCCCCATGACGCCAGAATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR TCA 90 bp GCATGCGTGCACAATACTACACAGTATTCTGCTCTTCCAATGTGGAAACAGTGGCCCCCAACCTGTGCTTaGGATGTTTGTCTTTGCAGA +
Preference number: 2 (lower is better)
Translates to: ACVHNTTQYSALPMWKQWPPTCA*DVCLCR
Trigger: TCTGCAAAGACAAACATCTCAAGCACAGGTTGGGGG...CCACTGTTTCCACATTGGAAGAGCAGAATACTGTGTAGTATTGTGCACGCATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR GCA 90 bp CAGTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGGATTCTGACGGCGGTTaGTTTCAACAATGCTTGATG +
Preference number: 2 (lower is better)
Translates to: QCVDFPMCAQIQLVTREQDSDGG*FQQCLM
Trigger: CATCAAGCATTGTTGAAAGCAACCGCCGTCAGAATC...CTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR GCA 90 bp CTCACTCGAGGTGTTGCACTGAAAATAGTCATCCACAGCTGTTTTAGCCGGGCAACGTTCGTGTTGCTATaGATGATGAAGTTGTCCCCT +
Preference number: 2 (lower is better)
Translates to: LTRGVALKIVIHSCFSRATFVLL*MMKLSP
Trigger: AGGGGACAACTTCATCATGCATAGCAACACGAACGT...TGCCCGGCTAAAACAGCTGTGGATGACTATTTTCAGTGCAACACCTCGAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CCA 90 bp GACACATGCGCATATCCTATCTGCCATGTGCTTCCCACCACCAATGCTTCCTCTAAGCTGTGGTTCCAGTaGAGAATAATCTTGGCAAAG +
Preference number: 2 (lower is better)
Translates to: DTCAYPICHVLPTTNASSKLWFQ*RIILAK
Trigger: CTTTGCCAAGATTATTCTCCACTGGAACCACAGCTT...AGAGGAAGCATTGGTGGTGGGAAGCACATGGCAGATAGGATATGCGCATGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp GGCTCTAACCTTCCATTTCTGCCTTTCCAGAGCCATTGGTACCTCACTCGGAAAACAGTGGTATTGGTGTaGACTTGTTCATCTCGCACT +
Preference number: 2 (lower is better)
Translates to: GSNLPFLPFQSHWYLTRKTVVLV*TCSSRT
Trigger: AGTGCGAGATGAACAAGTCCACACCAATACCACTGT...TTTCCGAGTGAGGTACCAATGGCTCTGGAAAGGCAGAAATGGAAGGTTAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp GACACACATGCAACACCATGGCCTACTGCTGAAAAGCGTTTGAAACATTGCTTTCAATGCTTGATGTGTTaGAAGCCAGGCTCTCCCGAG +
Preference number: 2 (lower is better)
Translates to: DTHATPWPTAEKRLKHCFQCLMC*KPGSPE
Trigger: CTCGGGAGAGCCTGGCTTCCAACACATCAAGCATTG...AAAGCAATGTTTCAAACGCTTTTCAGCAGTAGGCCATGGTGTTGCATGTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
3UTR CAA 90 bp GTACCAGTGTGTTTAGGGTATGCCGTAGAATTTCTTGGCTTGGGGTaGGAACACCTCTCCTGTTTCCACGCCTTCACAATTTCCAAAGTA +
Preference number: 2 (lower is better)
Translates to: VPVCLGYAVEFLGLG*EHLSCFHAFTISKV
Trigger: TACTTTGGAAATTGTGAAGGCGTGGAAACAGGAGAGGTGTTCCAACCCCAAGCCAAGAAATTCTACGGCATACCCTAAACACACTGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR TCA 90 bp GTGCAAAATGCCGACAGATGTGTTGACCCTTTAAAGTTGAATGCCTCACAGAGACCCCCAACCTGTGCTTaGGATGTTTGTCTTTGCAGA +
Preference number: 2 (lower is better)
Translates to: VQNADRCVDPLKLNASQRPPTCA*DVCLCR
Trigger: TCTGCAAAGACAAACATCTCAAGCACAGGTTGGGGG...TCTCTGTGAGGCATTCAACTTTAAAGGGTCAACACATCTGTCGGCATTTTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR TCA 90 bp CTTTGCAGAGATGTAAACATCAGGCCCAATCGTCGTAAACGTTGCTGTATCGGAGCTTTCAACAATGCTTaGTGTGTTGGAAGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: LCRDVNIRPNRRKRCCIGAFNNA*CVGSQA
Trigger: AGCCTGGCTTCCAACACATCAAGCATTGTTGAAAGC...TCCGATACAGCAACGTTTACGACGATTGGGCCTGATGTTTACATCTCTGCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR TCA 90 bp CAGGCCTTAAAGTACTGTCATCAATGTATGATTGGCTCGGTGTTTGGTCATCTTGGGCAGTGTGCCTCATaGCATTTTCCACCGTCAAGT +
Preference number: 2 (lower is better)
Translates to: QALKYCHQCMIGSVFGHLGQCAS*HFPPSS
Trigger: ACTTGACGGTGGAAAATGTCATGAGGCACACTGCCC...AAGATGACCAAACACCGAGCCAATCATACATTGATGACAGTACTTTAAGGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR GCA 90 bp TTCACAAGTGAAGCCAGCAATGAGCCGTTAAAGGCCTCTGACTGCCTGTATACAGCTTCCCACCACCAATaGTTCCTCTATTCAAGAATC +
Preference number: 2 (lower is better)
Translates to: FTSEASNEPLKASDCLYTASHHQ*FLYSRI
Trigger: GATTCTTGAATAGAGGAAGCATTGGTGGTGGGAAGC...TGTATACAGGCAGTCAGAGGCCTTTAACGGCTCATTGCTGGCTTCACTTGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR GCA 90 bp TGTACTAAGGATGACAAGGAATCATCATTTACAATATGGTACACGGACACGATAAGGGAGGTAGGCAGGTaGACAAGGACCAGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: CTKDDKESSFTIWYTDTIREVGR*TRTSLA
Trigger: AGCCAGGCTGGTCCTTGTGCACCTGCCTACCTCCCT...TATCGTGTCCGTGTACCATATTGTAAATGATGATTCCTTGTCATCCTTAGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR GCA 90 bp TATAGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCCTAGTAACAGAAGCTTaGAAGCAGTTGGAAGGTTTC +
Preference number: 2 (lower is better)
Translates to: YRPAGSNTTLWHFRMEIGLVTEA*KQLEGF
Trigger: GAAACCTTCCAACTGCTTGCAAGCTTCTGTTACTAG...GCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp CTTCCAATGTGGAAACAGTGGTGGTGGAATAGGTATCTAGGTGGGAGGAGGAGATATGCTAATGGCTGCTaGTCTAAGGGAGGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: LPMWKQWWWNRYLGGRRRYANGC*SKGGSF
Trigger: AAAAGAACCTCCCTTAGACCAGCAGCCATTAGCATA...TCTCCTCCTCCCACCTAGATACCTATTCCACCACCACTGTTTCCACATTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp AATGACAGGAACCCAACGAGAAACTGTAAACAAAGGTGGATGTCTGGACTGGCCCTAGACATGTCGTCATaGAACACAAAGCTGTGGTTC +
Preference number: 2 (lower is better)
Translates to: NDRNPTRNCKQRWMSGLALDMSS*NTKLWF
Trigger: GAACCACAGCTTTGTGTTCCATGACGACATGTCTAG...GGCCAGTCCAGACATCCACCTTTGTTTACAGTTTCTCGTTGGGTTCCTGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp GCCTTAAAGTACTGTCATCAATGTATGATTGGCTCGGTGTTTGGTCATCTTGGCTCTCCTTGGCCTTGTTaGACCTCTCATTCCTGGATC +
Preference number: 2 (lower is better)
Translates to: ALKYCHQCMIGSVFGHLGSPWPC*TSHSWI
Trigger: GATCCAGGAATGAGAGGTCCAACAAGGCCAAGGAGA...GCCAAGATGACCAAACACCGAGCCAATCATACATTGATGACAGTACTTTAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CAA 90 bp TCCTCGGGAGGAAACTGGGCAGAGAAATTGGCCAGCTGTTTGGTCTaGTCTTTCTTAAAACTCAGCCGGAATAACTTGAGACCGAATTTT +
Preference number: 2 (lower is better)
Translates to: SSGGNWAEKLASCLV*SFLKLSRNNLRPNF
Trigger: AAAATTCGGTCTCAAGTTATTCCGGCTGAGTTTTAAGAAAGACAAGACCAAACAGCTGGCCAATTTCTCTGCCCAGTTTCCTCCCGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR TCA 90 bp GTCATTTTCCTGGGATTAGATCTAACCCTGGTGCAGATGGATTTCCAGTACCTACCCGAACGTGCCTCCTaGAGTCATTACAAAGTATCT +
Preference number: 2 (lower is better)
Translates to: VIFLGLDLTLVQMDFQYLPERAS*SHYKVS
Trigger: AGATACTTTGTAATGACTTCAGGAGGCACGTTCGGG...TAGGTACTGGAAATCCATCTGCACCAGGGTTAGATCTAATCCCAGGAAAATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR GCA 90 bp CTGGAGCTTTGCCGAATTCTAAATTTTGCAACCATTAAGCCTGTGAACAACAATGCGGGAGCAGAAGTGTaGACATCTCCCCTACTGCTA +
Preference number: 2 (lower is better)
Translates to: LELCRILNFATIKPVNNNAGAEV*TSPLLL
Trigger: TAGCAGTAGGGGAGATGTGCACACTTCTGCTCCCGC...ATTGTTGTTCACAGGCTTAATGGTTGCAAAATTTAGAATTCGGCAAAGCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR GCA 90 bp GACACACATGCAACACCATGGCCTACTGCTGAAAAGCGTTTGAAACATTGCTTTTGCTATGCTAATGGCTaGTGGTCTAAGGGAGGTTCT +
Preference number: 2 (lower is better)
Translates to: DTHATPWPTAEKRLKHCFCYANG*WSKGGS
Trigger: AGAACCTCCCTTAGACCAGCAGCCATTAGCATAGCA...AAAGCAATGTTTCAAACGCTTTTCAGCAGTAGGCCATGGTGTTGCATGTGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR GCA 90 bp TGTACTAAGGATGACAAGGAATCATCATTTACAATATGGTACACGGACACGATAACCACGGAGCCCCTCTaGATTGCTGACGCAAGCCAA +
Preference number: 2 (lower is better)
Translates to: CTKDDKESSFTIWYTDTITTEPL*IADASQ
Trigger: TTGGCTTGCGTCAGCAATGCAGAGGGGCTCCGTGGT...TATCGTGTCCGTGTACCATATTGTAAATGATGATTCCTTGTCATCCTTAGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR GCA 90 bp ATCCTATCTGCCATGTGCTTCCCACCACCAATGCTTCCTCTATTCAAGAATCCAGATTCTGACGGCGGTTaGTTTCAACAATGCTTGATG +
Preference number: 2 (lower is better)
Translates to: ILSAMCFPPPMLPLFKNPDSDGG*FQQCLM
Trigger: CATCAAGCATTGTTGAAAGCAACCGCCGTCAGAATC...TGGATTCTTGAATAGAGGAAGCATTGGTGGTGGGAAGCACATGGCAGATAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
3UTR-3UTR GCA 90 bp GCCTTAAAGTACTGTCATCAATGTATGATTGGCTCGGTGTTTGGTCATCTTGGCTGGCAAGAGTCGCAGTaGTTTCTGGGTAATGTCCTT +
Preference number: 2 (lower is better)
Translates to: ALKYCHQCMIGSVFGHLGWQESQ*FLGNVL
Trigger: AAGGACATTACCCAGAAAGCACTGCGACTCTTGCCA...GCCAAGATGACCAAACACCGAGCCAATCATACATTGATGACAGTACTTTAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CCA 90 bp GGAAGGGGAACAACAGGCTTACAGTTGGAAGCCAAAGGATGTTGTGAAAGAAAAACACATGCAACACCATaGCCTACTGCTGAAAAGCGT +
Preference number: 2 (lower is better)
Translates to: GRGTTGLQLEAKGCCERKTHATP*PTAEKR
Trigger: ACGCTTTTCAGCAGTAGGCCATGGTGTTGCATGTGT...TTTTCTTTCACAACATCCTTTGGCTTCCAACTGTAAGCCTGTTGTTCCCCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp ATTTTGAGCTGCCCAGTTGAGCTGCGGAACTTTACCAGTCACTGGTTGTTAGCAAACTTTACCAGTCACTaGTTGTTAGCACAAGCTCAG +
Preference number: 2 (lower is better)
Translates to: ILSCPVELRNFTSHWLLANFTSH*LLAQAQ
Trigger: CTGAGCTTGTGCTAACAACCAGTGACTGGTAAAGTT...TGCTAACAACCAGTGACTGGTAAAGTTCCGCAGCTCAACTGGGCAGCTCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR TCA 90 bp TGTACTAAGGATGACAAGGAATCATCATTTACAATATGGTACACGGACACGATATCCCAAATGGCCTGGTaGGAACTGTGCCCATCACTG +
Preference number: 2 (lower is better)
Translates to: CTKDDKESSFTIWYTDTISQMAW*ELCPSL
Trigger: CAGTGATGGGCACAGTTCTCACCAGGCCATTTGGGA...TATCGTGTCCGTGTACCATATTGTAAATGATGATTCCTTGTCATCCTTAGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR GCA 90 bp GTCATTTTCCTGGGATTAGATCTAACCCTGGTGCAGATGGATTTCCAGTACCTACTACTGCTATTCGGTTaGTACAGAGCCATACATGTG +
Preference number: 2 (lower is better)
Translates to: VIFLGLDLTLVQMDFQYLLLLFG*YRAIHV
Trigger: CACATGTATGGCTCTGTAGCAACCGAATAGCAGTAG...TAGGTACTGGAAATCCATCTGCACCAGGGTTAGATCTAATCCCAGGAAAATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp TTCACAAGTGAAGCCAGCAATGAGCCGTTAAAGGCCTCTGACTGCCTGTATACAACATTTAGGAACAGCTaGTGTTTAAATCACTGCTCC +
Preference number: 2 (lower is better)
Translates to: FTSEASNEPLKASDCLYTTFRNS*CLNHCS
Trigger: GGAGCAGTGATTTAAACACCAGCTGTTCCTAAATGT...TGTATACAGGCAGTCAGAGGCCTTTAACGGCTCATTGCTGGCTTCACTTGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp GGCTCTAACCTTCCATTTCTGCCTTTCCAGAGCCATTGGTACCTCACTCGGAAATCTTTTTGTATTTCTTaGCAAAGCTCGGACAATAGC +
Preference number: 2 (lower is better)
Translates to: GSNLPFLPFQSHWYLTRKSFCIS*QSSDNS
Trigger: GCTATTGTCCGAGCTTTGCCAAGAAATACAAAAAGA...TTTCCGAGTGAGGTACCAATGGCTCTGGAAAGGCAGAAATGGAAGGTTAGAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR TCA 90 bp TGTATGCAGTGCTTCTCAGAAAACAGGGACTTTGGCAGAAGCGCCTTTCCTGTACTCTGGCATAGTTCATaGATGCATAATTGTCATTCT +
Preference number: 2 (lower is better)
Translates to: CMQCFSENRDFGRSAFPVLWHSS*MHNCHS
Trigger: AGAATGACAATTATGCATTCATGAACTATGCCAGAG...TACAGGAAAGGCGCTTCTGCCAAAGTCCCTGTTTTCTGAGAAGCACTGCATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR TCA 90 bp TGGGGTTATCACAGAAATGACAGGAACCCAACGAGAAACTGTAAACAAAGGTGGACACCCATACCTCTTTaGATGAAATGGACAAGGTGT +
Preference number: 2 (lower is better)
Translates to: WGYHRNDRNPTRNCKQRWTPIPL*MKWTRC
Trigger: ACACCTTGTCCATTTCATTCAAAGAGGTATGGGTGT...CCACCTTTGTTTACAGTTTCTCGTTGGGTTCCTGTCATTTCTGTGATAACCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR GCA 90 bp GAGCTTTGCCGAATTCTAAATTTTGCAACCATTAAGCCTGTGAACAACAATAATGTGACCCACAGGACCTaGTCTGCCATTGTGCAGCTA +
Preference number: 2 (lower is better)
Translates to: ELCRILNFATIKPVNNNNVTHRT*SAIVQL
Trigger: TAGCTGCACAATGGCAGAGCAGGTCCTGTGGGTCAC...ATTATTGTTGTTCACAGGCTTAATGGTTGCAAAATTTAGAATTCGGCAAAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp TGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGAGCAACACAACTCTGTaGCATTTCAGAATGGAAATT +
Preference number: 2 (lower is better)
Translates to: CRLSYVCSDTVSDAGAEVSNTTL*HFRMEI
Trigger: AATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCT...CACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp GTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCATACATGTGAAAAGAGCAACACAACTCTGTaGCATTTCAGAATGGAAATT +
Preference number: 2 (lower is better)
Translates to: VHISPTAIRLLQSHTCEKSNTTL*HFRMEI
Trigger: AATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCT...CTTTTCACATGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp TGTACTAAGGATGACAAGGAATCATCATTTACAATATGGTACACGGACACGATACTGCCACTGTGTTTCTaGGGGATCTTGAGTCACTCC +
Preference number: 2 (lower is better)
Translates to: CTKDDKESSFTIWYTDTILPLCF*GILSHS
Trigger: GGAGTGACTCAAGATCCCCCAGAAACACAGTGGCAG...TATCGTGTCCGTGTACCATATTGTAAATGATGATTCCTTGTCATCCTTAGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR TCA 90 bp TGTACTAAGGATGACAAGGAATCATCATTTACAATATGGTACACGGACACGATAGCCGTTAAAGGCCTCTaGCTGCCTGTATACAATCAC +
Preference number: 2 (lower is better)
Translates to: CTKDDKESSFTIWYTDTIAVKGL*LPVYNH
Trigger: GTGATTGTATACAGGCAGTCAGAGGCCTTTAACGGC...TATCGTGTCCGTGTACCATATTGTAAATGATGATTCCTTGTCATCCTTAGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp ATCCTATCTGCCATGTGCTTCCCACCACCAATGCTTCCTCTATTCAAGAATCCAGCATGTCTGTTTGTGTaGTATATCATCTTTAAAGCC +
Preference number: 2 (lower is better)
Translates to: ILSAMCFPPPMLPLFKNPACLFV*YIIFKA
Trigger: GGCTTTAAAGATGATATACCACACAAACAGACATGC...TGGATTCTTGAATAGAGGAAGCATTGGTGGTGGGAAGCACATGGCAGATAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp CTTTGCAGAGATGTAAACATCAGGCCCAATCGTCGTAAACGTTGCTGTATCGGAAAGCTTGCAAGCAGTTaGAAGGTTTCTGTAATTTCT +
Preference number: 2 (lower is better)
Translates to: LCRDVNIRPNRRKRCCIGKLASS*KVSVIS
Trigger: AGAAATTACAGAAACCTTCCAACTGCTTGCAAGCTT...TCCGATACAGCAACGTTTACGACGATTGGGCCTGATGTTTACATCTCTGCAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR CAA 90 bp GGCATTTCTTATTTCTACCTGGCTGCTCTCATTTCTTCTTTCCTATaGGTTTTCCCTATTGGGTGTGCACACATCCTATTTTTGCACTCA +
Preference number: 2 (lower is better)
Translates to: GISYFYLAALISSFL*VFPIGCAHILFLHS
Trigger: TGAGTGCAAAAATAGGATGTGTGCACACCCAATAGGGAAAACCAATAGGAAAGAAGAAATGAGAGCAGCCAGGTAGAAATAAGAAATGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CAA 90 bp AACAGCTGGTGTTTAAATCACTGCTCCTCCACATTCCCTTTCCACTaGTGTTTCCTGAATGTGAATTCTCCAACATATAAAACACAGGCA +
Preference number: 2 (lower is better)
Translates to: NSWCLNHCSSTFPFH*CFLNVNSPTYKTQA
Trigger: TGCCTGTGTTTTATATGTTGGAGAATTCACATTCAGGAAACACAAGTGGAAAGGGAATGTGGAGGAGCAGTGATTTAAACACCAGCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp GTGCAAAATGCCGACAGATGTGTTGACCCTTTAAAGTTGAATGCCTCACAGAGAAAGCTTGCAAGCAGTTaGAAGGTTTCTGTAATTTCT +
Preference number: 2 (lower is better)
Translates to: VQNADRCVDPLKLNASQRKLASS*KVSVIS
Trigger: AGAAATTACAGAAACCTTCCAACTGCTTGCAAGCTT...TCTCTGTGAGGCATTCAACTTTAAAGGGTCAACACATCTGTCGGCATTTTGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
3UTR CAA 90 bp TATCTTCCCAGGAATAAAAGGCCTGAAGTTCAACGCTCCCTAAATTaGCTCTTTCTTACAACCACTAAAAATCATCTCCCACAGCCTAAT +
Preference number: 2 (lower is better)
Translates to: YLPRNKRPEVQRSLN*LFLTTTKNHLPQPN
Trigger: ATTAGGCTGTGGGAGATGATTTTTAGTGGTTGTAAGAAAGAGCAAATTTAGGGAGCGTTGAACTTCAGGCCTTTTATTCCTGGGAAGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR TCA 90 bp CTGGAGCTTTGCCGAATTCTAAATTTTGCAACCATTAAGCCTGTGAACAACAATTCCAGAAGGATGAGGTaGCAGCTGATTCTTTTTGTA +
Preference number: 2 (lower is better)
Translates to: LELCRILNFATIKPVNNNSRRMR*QLILFV
Trigger: TACAAAAAGAATCAGCTGTCACCTCATCCTTCTGGA...ATTGTTGTTCACAGGCTTAATGGTTGCAAAATTTAGAATTCGGCAAAGCTCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR GCA 90 bp TGTACTAAGGATGACAAGGAATCATCATTTACAATATGGTACACGGACACGATACTAACCTTCCATTTCTaGCTTTCCAGAGCCATTGGT +
Preference number: 2 (lower is better)
Translates to: CTKDDKESSFTIWYTDTILTFHF*LSRAIG
Trigger: ACCAATGGCTCTGGAAAGGCAGAAATGGAAGGTTAG...TATCGTGTCCGTGTACCATATTGTAAATGATGATTCCTTGTCATCCTTAGTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp TGGTGTTTAAATCACTGCTCCTCCACATTCCCTTTCCACTTGTGTTTCCTGAATAGCAACACAACTCTGTaGCATTTCAGAATGGAAATT +
Preference number: 2 (lower is better)
Translates to: WCLNHCSSTFPFHLCFLNSNTTL*HFRMEI
Trigger: AATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCT...ATTCAGGAAACACAAGTGGAAAGGGAATGTGGAGGAGCAGTGATTTAAACACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp TTCTTCTTTCCTATTGGTTTTCCCTATTGGGTGTGCACACATCCTATTTTTGCATATGCTAATGGCTGCTaGTCTAAGGGAGGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: FFFPIGFPYWVCTHPIFAYANGC*SKGGSF
Trigger: AAAAGAACCTCCCTTAGACCAGCAGCCATTAGCATA...TGCAAAAATAGGATGTGTGCACACCCAATAGGGAAAACCAATAGGAAAGAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CAA 90 bp TATGTGTTTCCACCTACTTCATATAACTGTGTCCCCTTAAACACATaGCTCGTGACTAAGTCTGACACAGAAAAAGAAGTAGCTCACAAA +
Preference number: 2 (lower is better)
Translates to: YVFPPTSYNCVPLNT*LVTKSDTEKEVAHK
Trigger: TTTGTGAGCTACTTCTTTTTCTGTGTCAGACTTAGTCACGAGCAATGTGTTTAAGGGGACACAGTTATATGAAGTAGGTGGAAACACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CAA 90 bp TCTTTCCTATTGGTTTTCCCTATTGGGTGTGCACACATCCTATTTTaGCACTCATTAAGGTCTCCTGAGATGTGTAAGATATATCAAACG +
Preference number: 2 (lower is better)
Translates to: SFLLVFPIGCAHILF*HSLRSPEMCKIYQT
Trigger: CGTTTGATATATCTTACACATCTCAGGAGACCTTAATGAGTGCAAAAATAGGATGTGTGCACACCCAATAGGGAAAACCAATAGGAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CAA 90 bp TATATAAGTGTGCAAAATGCCGACAGATGTGTTGACCCTTTAAAGTaGAATGCCTCACAGAGATTCAACCAGACTCAGTTTTGTAAACTT +
Preference number: 2 (lower is better)
Translates to: YISVQNADRCVDPLK*NASQRFNQTQFCKL
Trigger: AAGTTTACAAAACTGAGTCTGGTTGAATCTCTGTGAGGCATTCAACTTTAAAGGGTCAACACATCTGTCGGCATTTTGCACACTTATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CCA 90 bp TGTACTAAGGATGACAAGGAATCATCATTTACAATATGGTACACGGACACGATAAGTGATGTCTCACCATaGCCTATCAAACAGATAGAA +
Preference number: 2 (lower is better)
Translates to: CTKDDKESSFTIWYTDTISDVSP*PIKQIE
Trigger: TTCTATCTGTTTGATAGGCCATGGTGAGACATCACT...TATCGTGTCCGTGTACCATATTGTAAATGATGATTCCTTGTCATCCTTAGTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CAA 90 bp TCCCTTCCATTAGAAAGAATAACACCCTCAGGCCACATTCTTCATTaGTATCATAAAGAACATTTTGTTTCCCAACAAACTAATCACTGC +
Preference number: 2 (lower is better)
Translates to: SLPLERITPSGHILH*YHKEHFVSQQTNHC
Trigger: GCAGTGATTAGTTTGTTGGGAAACAAAATGTTCTTTATGATACAAATGAAGAATGTGGCCTGAGGGTGTTATTCTTTCTAATGGAAGGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CAA 90 bp TTAAGGTCTCCTGAGATGTGTAAGATATATCAAACGGTAGATAAATaGCTTAACAGACATCCCAGAATGCACGGCACAGTTCTTTTAATA +
Preference number: 2 (lower is better)
Translates to: LRSPEMCKIYQTVDK*LNRHPRMHGTVLLI
Trigger: TATTAAAAGAACTGTGCCGTGCATTCTGGGATGTCTGTTAAGCAATTTATCTACCGTTTGATATATCTTACACATCTCAGGAGACCTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CCA 72 bp CTCCTGGTTCCCTCCAGGCTCCTGCTGACGTTGGGATaGAGGCATGGCTTGGGCCGCGGATGTCCCAAGGGA +
Preference number: 3 (lower is better)
Translates to: LLVPSRLLLTLG*RHGLGRGCPKG
Trigger: TCCCTTGGGACATCCGCGGCCCAAGCCATGCCTCCATCCCAACGTCAGCAGGAGCCTGGAGGGAACCAGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR TCA 72 bp CTTCGCTGGTCGGGGGATCCGTACTGGCGCGGAAGTTaGAGGTTGGACCAGCTCCGCCATGGGCTGGACTCA +
Preference number: 3 (lower is better)
Translates to: LRWSGDPYWRGS*RLDQLRHGLDS
Trigger: TGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAACTTCCGCGCCAGTACGGATCCCCCGACCAGCGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR GCA 72 bp GCACCTGGCAGAGCGGAGGAGGGCAGTAAGGGTCTTTaGAGTCCTTGGCGGACTTCCTCTGCAGGGTGGAGG +
Preference number: 3 (lower is better)
Translates to: APGRAEEGSKGL*SPWRTSSAGWR
Trigger: CCTCCACCCTGCAGAGGAAGTCCGCCAAGGACTGCAAAGACCCTTACTGCCCTCCTCCGCTCTGCCAGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CCA 72 bp GGTCGGGGGATCCGTACTGGCGCGGAAGTTGAAGGTTaGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGG +
Preference number: 3 (lower is better)
Translates to: GRGIRTGAEVEG*TSSAMGWTQSR
Trigger: CCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAACTTCCGCGCCAGTACGGATCCCCCGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR GCA 72 bp GCGGACTTCCTCTGCAGGGTGGAGGCATGCATGCTGTaGACGTCTTCTCGGCAGCAGTGGCAAGAGTCGCAG +
Preference number: 3 (lower is better)
Translates to: ADFLCRVEACML*TSSRQQWQESQ
Trigger: CTGCGACTCTTGCCACTGCTGCCGAGAAGACGTGCACAGCATGCATGCCTCCACCCTGCAGAGGAAGTCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR TCA 72 bp CATAGAAGCCGTCACCACGGAGCCCCTCTGCATTGCTaGCGCAAGCCAAGGGGACGGGCATCAATCAGGGAG +
Preference number: 3 (lower is better)
Translates to: HRSRHHGAPLHC*RKPRGRASIRE
Trigger: CTCCCTGATTGATGCCCGTCCCCTTGGCTTGCGTCAGCAATGCAGAGGGGCTCCGTGGTGACGGCTTCTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR GCA 72 bp CCTTGGCGGACTTCCTCTGCAGGGTGGAGGCATGCATaGTGTGCACGTCTTCTCGGCAGCAGTGGCAAGAGT +
Preference number: 3 (lower is better)
Translates to: PWRTSSAGWRHA*CARLLGSSGKS
Trigger: ACTCTTGCCACTGCTGCCGAGAAGACGTGCACAGCATGCATGCCTCCACCCTGCAGAGGAAGTCCGCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR GCA 72 bp CAGTCCTTGGCGGACTTCCTCTGCAGGGTGGAGGCATaGATGCTGTGCACGTCTTCTCGGCAGCAGTGGCAA +
Preference number: 3 (lower is better)
Translates to: QSLADFLCRVEA*MLCTSSRQQWQ
Trigger: TTGCCACTGCTGCCGAGAAGACGTGCACAGCATGCATGCCTCCACCCTGCAGAGGAAGTCCGCCAAGGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CCA 72 bp AGAGCGGAGGAGGGCAGTAAGGGTCTTTGCAGTCCTTaGCGGACTTCCTCTGCAGGGTGGAGGCATGCATGC +
Preference number: 3 (lower is better)
Translates to: RAEEGSKGLCSP*RTSSAGWRHAC
Trigger: GCATGCATGCCTCCACCCTGCAGAGGAAGTCCGCCAAGGACTGCAAAGACCCTTACTGCCCTCCTCCGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CCA 72 bp TCCTGGGTATGGCTGTGGCTTCGGTGCACTTTGGAGTaGGAGCTTCCCCTGGAGGGTTCGGGAAAGGGCATC +
Preference number: 3 (lower is better)
Translates to: SWVWLWLRCTLE*ELPLEGSGKGI
Trigger: GATGCCCTTTCCCGAACCCTCCAGGGGAAGCTCCCACTCCAAAGTGCACCGAAGCCACAGCCATACCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CAA 90 bp CCTGGCAGAGCGGAGGAGGGCAGTAAGGGTCTTTGCAGTCCTTGGCGGACTTCCCGTTATGGTTCCTGGTaGTGGCGAGGTGCACTGAGA +
Preference number: 3 (lower is better)
Translates to: PGRAEEGSKGLCSPWRTSRYGSW*WRGALR
Trigger: TCTCAGTGCACCTCGCCACAACCAGGAACCATAACG...GGAAGTCCGCCAAGGACTGCAAAGACCCTTACTGCCCTCCTCCGCTCTGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CAA 90 bp AATCCACTGTCCACCGTGATGCTGCTGCTATCCATGCTGTCCAGCCGGGCTGAGGGGTCTTTGCAGTCCTaGGCGGACTTCCTCTGCAGG +
Preference number: 3 (lower is better)
Translates to: NPLSTVMLLLSMLSSRAEGSLQS*ADFLCR
Trigger: CCTGCAGAGGAAGTCCGCCAAGGACTGCAAAGACCC...CTCAGCCCGGCTGGACAGCATGGATAGCAGCAGCATCACGGTGGACAGTGGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR TCA 72 bp GCTGCAGCCTTCAGCCAGGTCTTCCGGAGTCCCGAGTaGAGAAGCGCCCAGGGGACCTTTGGAGTTATCCAT +
Preference number: 3 (lower is better)
Translates to: AAAFSQVFRSPE*RSAQGTFGVIH
Trigger: ATGGATAACTCCAAAGGTCCCCTGGGCGCTTCTTCACTCGGGACTCCGGAAGACCTGGCTGAAGGCTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR TCA 72 bp CGTGATGCTGCTGCTATCCATGCTGTCCAGCCGGGCTaGGTGGGTGGCTCTCTGGTTGCTGCTGCTATCAGT +
Preference number: 3 (lower is better)
Translates to: RDAAAIHAVQPG*VGGSLVAAAIS
Trigger: ACTGATAGCAGCAGCAACCAGAGAGCCACCCACTCAGCCCGGCTGGACAGCATGGATAGCAGCAGCATCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CCA 72 bp CTCTCATTCCTGGATCTCCGGTCCTGGGTATGGCTGTaGCTTCGGTGCACTTTGGAGTGGGAGCTTCCCCTG +
Preference number: 3 (lower is better)
Translates to: LSFLDLRSWVWL*LRCTLEWELPL
Trigger: CAGGGGAAGCTCCCACTCCAAAGTGCACCGAAGCCACAGCCATACCCAGGACCGGAGATCCAGGAATGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CCA 72 bp TGGGTTCTGCGCTATGATGTTGGACAAGGCGGCCATTaGCTAACCCCTCTGCCACACCACCAGAGGCTGCAG +
Preference number: 3 (lower is better)
Translates to: WVLRYDVGQGGH*LTPLPHHQRLQ
Trigger: CTGCAGCCTCTGGTGGTGTGGCAGAGGGGTTAGCCAATGGCCGCCTTGTCCAACATCATAGCGCAGAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CAA 90 bp TGGGAGCTTCCCCTGGAGGGTTCGGGAAAGGGCATCTCCGTTCTCCTTTTGGCCTTGGACACTCGCGTCTaGCTGTGTGACCGAGACTTC +
Preference number: 3 (lower is better)
Translates to: WELPLEGSGKGISVLLLALDTRV*LCDRDF
Trigger: GAAGTCTCGGTCACACAGCAAGACGCGAGTGTCCAA...GGCCAAAAGGAGAACGGAGATGCCCTTTCCCGAACCCTCCAGGGGAAGCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CAA 90 bp CTCAGCTTCGCTGGTCGGGGGATCCGTACTGGCGCGGAAGTTGAAGGTTGGACCACCCCCAACCTGTGCTaGAGATGTTTGTCTTTGCAG +
Preference number: 3 (lower is better)
Translates to: LSFAGRGIRTGAEVEGWTTPNLC*RCLSLQ
Trigger: CTGCAAAGACAAACATCTCAAGCACAGGTTGGGGGT...GGTCCAACCTTCAACTTCCGCGCCAGTACGGATCCCCCGACCAGCGAAGCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR TCA 72 bp GAGGGCGTTATGGTTCCTGGTTGTGGCGAGGTGCACTaGGACCTGTCAGGTACCCTCTCGTCCAAGTGGTAC +
Preference number: 3 (lower is better)
Translates to: EGVMVPGCGEVH*DLSGTLSSKWY
Trigger: GTACCACTTGGACGAGAGGGTACCTGACAGGTCTCAGTGCACCTCGCCACAACCAGGAACCATAACGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR GCA 72 bp AGGCAGAGGGCGTTATGGTTCCTGGTTGTGGCGAGGTaGACTGAGACCTGTCAGGTACCCTCTCGTCCAAGT +
Preference number: 3 (lower is better)
Translates to: RQRALWFLVVAR*TETCQVPSRPS
Trigger: ACTTGGACGAGAGGGTACCTGACAGGTCTCAGTGCACCTCGCCACAACCAGGAACCATAACGCCCTCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR GCA 72 bp AGCCATCCGAAGGATCTCCTTTGGACACTCGCGTCTTaGTGTGTGACCGAGACTTCCCGTGGGACTTGCGGT +
Preference number: 3 (lower is better)
Translates to: SHPKDLLWTLAS*CVTETSRGTCG
Trigger: ACCGCAAGTCCCACGGGAAGTCTCGGTCACACAGCAAGACGCGAGTGTCCAAAGGAGATCCTTCGGATGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CCA 72 bp TGTGGCTTCGGTGCACTTTGGAGTGGGAGCTTCCCCTaGAGGGTTCGGGAAAGGGCATCTCCGTTCTCCTTT +
Preference number: 3 (lower is better)
Translates to: CGFGALWSGSFP*RVRERASPFSF
Trigger: AAAGGAGAACGGAGATGCCCTTTCCCGAACCCTCCAGGGGAAGCTCCCACTCCAAAGTGCACCGAAGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CCA 72 bp TCCATGCTGTCCAGCCGGGCTGAGTGGGTGGCTCTCTaGTTGCTGCTGCTATCAGTTTCTTTTGGGGTGAGG +
Preference number: 3 (lower is better)
Translates to: SMLSSRAEWVAL*LLLLSVSFGVR
Trigger: CCTCACCCCAAAAGAAACTGATAGCAGCAGCAACCAGAGAGCCACCCACTCAGCCCGGCTGGACAGCATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CAA 90 bp GGCATGGCTTGGGCCGCGGATGTCCCAAGGGAAGGTTCCAGTTTCTCACAACGGAACTGGGCAGAGAAATaGGCCAGCTGTTTGGTCTTG +
Preference number: 3 (lower is better)
Translates to: GMAWAADVPREGSSFSQRNWAEK*ASCLVL
Trigger: CAAGACCAAACAGCTGGCCAATTTCTCTGCCCAGTT...CCGTTGTGAGAAACTGGAACCTTCCCTTGGGACATCCGCGGCCCAAGCCATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR TCA 72 bp AGTGTCTCAAGGAGGCAGGTATCCTGCTCCAGTATCTaGTTCATCCCTCCGGGTCATCCACGCACCCTCCTC +
Preference number: 3 (lower is better)
Translates to: SVSRRQVSCSSI*FIPPGHPRTLL
Trigger: GAGGAGGGTGCGTGGATGACCCGGAGGGATGAATCAGATACTGGAGCAGGATACCTGCCTCCTTGAGACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR TCA 72 bp TTGCTGTGTGACCGAGACTTCCCGTGGGACTTGCGGTaGGTCCGGCTCTTTTTACTCCTTCCACTGTGGTGG +
Preference number: 3 (lower is better)
Translates to: LLCDRDFPWDLR*VRLFLLLPLWW
Trigger: CCACCACAGTGGAAGGAGTAAAAAGAGCCGGACTCACCGCAAGTCCCACGGGAAGTCTCGGTCACACAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR GCA 72 bp TGCACGTCTTCTCGGCAGCAGTGGCAAGAGTCGCAGTaGTTTCTGGGTAATGTCCTTTCCCTGACGCAGCCT +
Preference number: 3 (lower is better)
Translates to: CTSSRQQWQESQ*FLGNVLSLTQP
Trigger: AGGCTGCGTCAGGGAAAGGACATTACCCAGAAAGCACTGCGACTCTTGCCACTGCTGCCGAGAAGACGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR GCA 72 bp GCGTCTTGCTGTGTGACCGAGACTTCCCGTGGGACTTaGGGTGAGTCCGGCTCTTTTTACTCCTTCCACTGT +
Preference number: 3 (lower is better)
Translates to: ASCCVTETSRGT*GESGSFYSFHC
Trigger: ACAGTGGAAGGAGTAAAAAGAGCCGGACTCACCGCAAGTCCCACGGGAAGTCTCGGTCACACAGCAAGACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CCA 72 bp ATGCTGCTGCTATCCATGCTGTCCAGCCGGGCTGAGTaGGTGGCTCTCTGGTTGCTGCTGCTATCAGTTTCT +
Preference number: 3 (lower is better)
Translates to: MLLLSMLSSRAE*VALWLLLLSVS
Trigger: AGAAACTGATAGCAGCAGCAACCAGAGAGCCACCCACTCAGCCCGGCTGGACAGCATGGATAGCAGCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CAA 90 bp AATCCACTGTCCACCGTGATGCTGCTGCTATCCATGCTGTCCAGCCGGGCTGAGGTAGAATTTCTTGGCTaGGGGTTGGAACACCTCTCC +
Preference number: 3 (lower is better)
Translates to: NPLSTVMLLLSMLSSRAEVEFLG*GLEHLS
Trigger: GGAGAGGTGTTCCAACCCCAAGCCAAGAAATTCTAC...CTCAGCCCGGCTGGACAGCATGGATAGCAGCAGCATCACGGTGGACAGTGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CAA 90 bp GCACTGAAAATAGTCATCCACAGCTGTTTTAGCCGGGCAAGGGCTGAGTTCCCCCGGTGTTTGGTCATCTaGGCTGCAGCCTTCAGCCAG +
Preference number: 3 (lower is better)
Translates to: ALKIVIHSCFSRARAEFPRCLVI*AAAFSQ
Trigger: CTGGCTGAAGGCTGCAGCCAAGATGACCAAACACCG...GGGGAACTCAGCCCTTGCCCGGCTAAAACAGCTGTGGATGACTATTTTCAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR TCA 72 bp CCACTGTGGTGGGCGGAGGACCCGGCTTTGCTCCGGTaGGCTTTTTCTTCTTCAAGTTTCTTCATCAGGGCA +
Preference number: 3 (lower is better)
Translates to: PLWWAEDPALLR*AFSSSSFFIRA
Trigger: TGCCCTGATGAAGAAACTTGAAGAAGAAAAAGCTCACCGGAGCAAAGCCGGGTCCTCCGCCCACCACAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR GCA 72 bp CAATGTATGATTGGCTCGGTGTTTGGTCATCTTGGCTaGAGCCTTCAGCCAGGTCTTCCGGAGTCCCGAGTG +
Preference number: 3 (lower is better)
Translates to: QCMIGSVFGHLG*SLQPGLPESRV
Trigger: CACTCGGGACTCCGGAAGACCTGGCTGAAGGCTGCAGCCAAGATGACCAAACACCGAGCCAATCATACATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CCA 72 bp GAGGCATGCATGCTGTGCACGTCTTCTCGGCAGCAGTaGCAAGAGTCGCAGTGCTTTCTGGGTAATGTCCTT +
Preference number: 3 (lower is better)
Translates to: EACMLCTSSRQQ*QESQCFLGNVL
Trigger: AAGGACATTACCCAGAAAGCACTGCGACTCTTGCCACTGCTGCCGAGAAGACGTGCACAGCATGCATGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CCA 72 bp GGATATCCAGATGCGAGCCATCCGAAGGATCTCCTTTaGACACTCGCGTCTTGCTGTGTGACCGAGACTTCC +
Preference number: 3 (lower is better)
Translates to: GYPDASHPKDLL*TLASCCVTETS
Trigger: GGAAGTCTCGGTCACACAGCAAGACGCGAGTGTCCAAAGGAGATCCTTCGGATGGCTCGCATCTGGATATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR TCA 72 bp GAGAGAGAGAGCTGCCACTGTGTTTCTGGGGGATCTTaGGTCACTCCGTTTGTCTGCTCCTGTCAAGCATGC +
Preference number: 3 (lower is better)
Translates to: ERESCHCVSGGS*VTPFVCSCQAC
Trigger: GCATGCTTGACAGGAGCAGACAAACGGAGTGACTCAAGATCCCCCAGAAACACAGTGGCAGCTCTCTCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR TCA 72 bp AGCAGGATTCTGACGGCGGTTGCTTTCAACAATGCTTaGTGTGTTGGAAGCCAGGCTCTCCCGAGTGCAGTC +
Preference number: 3 (lower is better)
Translates to: SRILTAVAFNNA*CVGSQALPSAV
Trigger: GACTGCACTCGGGAGAGCCTGGCTTCCAACACATCAAGCATTGTTGAAAGCAACCGCCGTCAGAATCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR TCA 72 bp TCTTTCCTTTTGTCCAGGCTGCTGGGTTCTGCGCTATaGTGTTGGACAAGGCGGCCATTGGCTAACCCCTCT +
Preference number: 3 (lower is better)
Translates to: SFLLSRLLGSAL*CWTRRPLANPS
Trigger: AGAGGGGTTAGCCAATGGCCGCCTTGTCCAACATCATAGCGCAGAACCCAGCAGCCTGGACAAAAGGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR TCA 72 bp CAGTTTCTCACAACGGCCTGGCAGTGTGTCAACGGGTaGCTTTGGGTGAGACTTGAGGAGGGACAAGCTAGA +
Preference number: 3 (lower is better)
Translates to: QFLTTAWQCVNG*LWVRLEEGQAR
Trigger: TCTAGCTTGTCCCTCCTCAAGTCTCACCCAAAGTCACCCGTTGACACACTGCCAGGCCGTTGTGAGAAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CCA 72 bp AGGAGAGAGAGAGAGAGAGAGCTGCCACTGTGTTTCTaGGGGATCTTGAGTCACTCCGTTTGTCTGCTCCTG +
Preference number: 3 (lower is better)
Translates to: RRERERELPLCF*GILSHSVCLLL
Trigger: CAGGAGCAGACAAACGGAGTGACTCAAGATCCCCCAGAAACACAGTGGCAGCTCTCTCTCTCTCTCTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CCA 72 bp TCATCAATGTATGATTGGCTCGGTGTTTGGTCATCTTaGCTGCAGCCTTCAGCCAGGTCTTCCGGAGTCCCG +
Preference number: 3 (lower is better)
Translates to: SSMYDWLGVWSS*LQPSARSSGVP
Trigger: CGGGACTCCGGAAGACCTGGCTGAAGGCTGCAGCCAAGATGACCAAACACCGAGCCAATCATACATTGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CAA 90 bp AGGCAGGTGCACAAGGACCAGCCTGGCTCTAACCTTCCATTTCTGCCTTTCCAGCTTGAGTCACTCCGTTaGTCTGCTCCTGTCAAGCAT +
Preference number: 3 (lower is better)
Translates to: RQVHKDQPGSNLPFLPFQLESLR*SAPVKH
Trigger: ATGCTTGACAGGAGCAGACAAACGGAGTGACTCAAG...CTGGAAAGGCAGAAATGGAAGGTTAGAGCCAGGCTGGTCCTTGTGCACCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR GCA 72 bp GGAAAGGAAACACCACTTCTTGTGTCTACTGTGGTCTaGGCTACACTGCTAGTTGGGTGTGGGACTGGTCTG +
Preference number: 3 (lower is better)
Translates to: GKETPLLVSTVV*ATLLVGCGTGL
Trigger: CAGACCAGTCCCACACCCAACTAGCAGTGTAGCGCAGACCACAGTAGACACAAGAAGTGGTGTTTCCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR GCA 72 bp GTAATCGTCACAGTCAGCCACGCAGAGAAAGACACCTaGAGAGCCATGATCCCTTGGAACTTGGAGGGTCAA +
Preference number: 3 (lower is better)
Translates to: VIVTVSHAEKDT*RAMIPWNLEGQ
Trigger: TTGACCCTCCAAGTTCCAAGGGATCATGGCTCTGCAGGTGTCTTTCTCTGCGTGGCTGACTGTGACGATTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR GCA 72 bp CATGGGCTGGACTCAAAGCAGGATTCTGACGGCGGTTaGTTTCAACAATGCTTGATGTGTTGGAAGCCAGGC +
Preference number: 3 (lower is better)
Translates to: HGLDSKQDSDGG*FQQCLMCWKPG
Trigger: GCCTGGCTTCCAACACATCAAGCATTGTTGAAAGCAACCGCCGTCAGAATCCTGCTTTGAGTCCAGCCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR GCA 72 bp CAAAATTCATACTCCCTCTCACCGGGGATATCCAGATaGGAGCCATCCGAAGGATCTCCTTTGGACACTCGC +
Preference number: 3 (lower is better)
Translates to: QNSYSLSPGISR*EPSEGSPLDTR
Trigger: GCGAGTGTCCAAAGGAGATCCTTCGGATGGCTCGCATCTGGATATCCCCGGTGAGAGGGAGTATGAATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CCA 72 bp AGCTGCCCAGTTGAGCTGCGGAACTTTACCAGTCACTaGTTGTTAGCACAAGCTCAGAATGCTACCTCTCCC +
Preference number: 3 (lower is better)
Translates to: SCPVELRNFTSH*LLAQAQNATSP
Trigger: GGGAGAGGTAGCATTCTGAGCTTGTGCTAACAACCAGTGACTGGTAAAGTTCCGCAGCTCAACTGGGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp GGCTCTAACCTTCCATTTCTGCCTTTCCAGAGCCATTGGTACCTCACTCGGAAACACCCCCTTCCTGTCTaGGTGGCAGCCACAATAGAA +
Preference number: 3 (lower is better)
Translates to: GSNLPFLPFQSHWYLTRKHPLPV*VAATIE
Trigger: TTCTATTGTGGCTGCCACCAAGACAGGAAGGGGGTG...TTTCCGAGTGAGGTACCAATGGCTCTGGAAAGGCAGAAATGGAAGGTTAGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp GCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACTGACCCCCAACCTGTGCTaGAGATGTTTGTCTTTGCAG +
Preference number: 3 (lower is better)
Translates to: AGWEQHNSVAFQNGNWQLTPNLC*RCLSLQ
Trigger: CTGCAAAGACAAACATCTCAAGCACAGGTTGGGGGT...CAGTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp GAGAGAGCTGCCACTGTGTTTCTGGGGGATCTTGAGTCACTCCGTTTGTCTGCTCTTAAGGAGCCCAGTTaGACCCAACACAACTTCCAA +
Preference number: 3 (lower is better)
Translates to: ERAATVFLGDLESLRLSALKEPS*TQHNFQ
Trigger: TTGGAAGTTGTGTTGGGTCAAACTGGGCTCCTTAAG...AGCAGACAAACGGAGTGACTCAAGATCCCCCAGAAACACAGTGGCAGCTCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp TCCAGATGCGAGCCATCCGAAGGATCTCCTTTGGACACTCGCGTCTTGCTGTGTGCCAGCTGTTTGGTCTaGTCTTTCTTAAAACTCAGC +
Preference number: 3 (lower is better)
Translates to: SRCEPSEGSPLDTRVLLCASCLV*SFLKLS
Trigger: GCTGAGTTTTAAGAAAGACAAGACCAAACAGCTGGC...ACACAGCAAGACGCGAGTGTCCAAAGGAGATCCTTCGGATGGCTCGCATCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CAA 90 bp AAGGTTCCTTGCTGCCACCAACTATTTCTGGAATGCATACCTCTTTGTAGCTGGGCGCCCAGGGGACCTTaGGAGTTATCCATAGACCTG +
Preference number: 3 (lower is better)
Translates to: KVPCCHQLFLECIPLCSWAPRGP*ELSIDL
Trigger: CAGGTCTATGGATAACTCCAAAGGTCCCCTGGGCGC...CCAGCTACAAAGAGGTATGCATTCCAGAAATAGTTGGTGGCAGCAAGGAACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR TCA 72 bp TCAGCACCTTCCACTGCCTGGAGCAGCCAATGTTCCTaGAGATGGGGTTATCACAGAAATGACAGGAACCCA +
Preference number: 3 (lower is better)
Translates to: SAPSTAWSSQCS*RWGYHRNDRNP
Trigger: TGGGTTCCTGTCATTTCTGTGATAACCCCATCTTCAGGAACATTGGCTGCTCCAGGCAGTGGAAGGTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR TCA 72 bp GGTCCTCCTTATTCTTCCCTAAAGGGGACGGTGCTGTaGGTACGGTCTCACTCGAGGTGTTGCACTGAAAAT +
Preference number: 3 (lower is better)
Translates to: GPPYSSLKGTVL*VRSHSRCCTEN
Trigger: ATTTTCAGTGCAACACCTCGAGTGAGACCGTACTCACAGCACCGTCCCCTTTAGGGAAGAATAAGGAGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR GCA 72 bp TGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTaGACATCTCCCCTACTGCTATTCGGTTGCTACAGA +
Preference number: 3 (lower is better)
Translates to: CSDTVSDAGAEV*TSPLLLFGCYR
Trigger: TCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR GCA 72 bp TGCACAAGGACCAGCCTGGCTCTAACCTTCCATTTCTaGCTTTCCAGAGCCATTGGTACCTCACTCGGAAAT +
Preference number: 3 (lower is better)
Translates to: CTRTSLALTFHF*LSRAIGTSLGN
Trigger: ATTTCCGAGTGAGGTACCAATGGCTCTGGAAAGGCAGAAATGGAAGGTTAGAGCCAGGCTGGTCCTTGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CCA 72 bp GACATGTCGTCATGGAACACAAAGCTGTGGTTCCAGTaGAGAATAATCTTGGCAAAGCCCAGAGAGGGCCTC +
Preference number: 3 (lower is better)
Translates to: DMSSWNTKLWFQ*RIILAKPREGL
Trigger: GAGGCCCTCTCTGGGCTTTGCCAAGATTATTCTCCACTGGAACCACAGCTTTGTGTTCCATGACGACATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CCA 72 bp CGTACCAGTGTGTTTAGGGTATGCCGTAGAATTTCTTaGCTTGGGGTTGGAACACCTCTCCTGTTTCCACGC +
Preference number: 3 (lower is better)
Translates to: RTSVFRVCRRIS*LGVGTPLLFPR
Trigger: GCGTGGAAACAGGAGAGGTGTTCCAACCCCAAGCCAAGAAATTCTACGGCATACCCTAAACACACTGGTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CAA 90 bp GACACATGCGCATATCCTATCTGCCATGTGCTTCCCACCACCAATGCTTCCTCTCCTACTGCTATTCGGTaGCTACAGAGCCATACATGT +
Preference number: 3 (lower is better)
Translates to: DTCAYPICHVLPTTNASSPTAIR*LQSHTC
Trigger: ACATGTATGGCTCTGTAGCAACCGAATAGCAGTAGG...AGAGGAAGCATTGGTGGTGGGAAGCACATGGCAGATAGGATATGCGCATGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp TATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCCCCCTACTGCTATTCGGTaGCTACAGAGCCATACATGT +
Preference number: 3 (lower is better)
Translates to: YVCSDTVSDAGAEVCTSPPTAIR*LQSHTC
Trigger: ACATGTATGGCTCTGTAGCAACCGAATAGCAGTAGG...GGGAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp GGCAGGTGCACAAGGACCAGCCTGGCTCTAACCTTCCATTTCTGCCTTTCCAGAAACACCCATACCTCTTaGAATGAAATGGACAAGGTG +
Preference number: 3 (lower is better)
Translates to: GRCTRTSLALTFHFCLSRNTHTS*NEMDKV
Trigger: CACCTTGTCCATTTCATTCAAAGAGGTATGGGTGTT...TCTGGAAAGGCAGAAATGGAAGGTTAGAGCCAGGCTGGTCCTTGTGCACCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp TATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCCCTGCTTTCAACAATGCTaGATGTGTTGGAAGCCAGGC +
Preference number: 3 (lower is better)
Translates to: YVCSDTVSDAGAEVCTSPCFQQC*MCWKPG
Trigger: GCCTGGCTTCCAACACATCAAGCATTGTTGAAAGCA...GGGAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp AATCCACTGTCCACCGTGATGCTGCTGCTATCCATGCTGTCCAGCCGGGCTGAGAAATTGGCCAGCTGTTaGGTCTTGTCTTTCTTAAAA +
Preference number: 3 (lower is better)
Translates to: NPLSTVMLLLSMLSSRAEKLASC*VLSFLK
Trigger: TTTTAAGAAAGACAAGACCAAACAGCTGGCCAATTT...CTCAGCCCGGCTGGACAGCATGGATAGCAGCAGCATCACGGTGGACAGTGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CAA 90 bp CCGCGTTTTTGTTGGCCCCCTCCTCGGAGTCGTCGTCATCAGAGACGTTGTAATATGAAGTTGTCCCCTTaGTGTTCAATGATGAAGCAG +
Preference number: 3 (lower is better)
Translates to: PRFCWPPPRSRRHQRRCNMKLSP*CSMMKQ
Trigger: CTGCTTCATCATTGAACACAAAGGGGACAACTTCAT...ATTACAACGTCTCTGATGACGACGACTCCGAGGAGGGGGCCAACAAAAACGCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CAA 90 bp GCACTGAAAATAGTCATCCACAGCTGTTTTAGCCGGGCAAGGGCTGAGTTCCCCTCGATCACGTTCGTGTaGCTATGCATGATGAAGTTG +
Preference number: 3 (lower is better)
Translates to: ALKIVIHSCFSRARAEFPSITFV*LCMMKL
Trigger: CAACTTCATCATGCATAGCAACACGAACGTGATCGA...GGGGAACTCAGCCCTTGCCCGGCTAAAACAGCTGTGGATGACTATTTTCAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CAA 90 bp CAGGCCTTAAAGTACTGTCATCAATGTATGATTGGCTCGGTGTTTGGTCATCTTTGGCTTCGGTGCACTTaGGAGTGGGAGCTTCCCCTG +
Preference number: 3 (lower is better)
Translates to: QALKYCHQCMIGSVFGHLWLRCT*EWELPL
Trigger: CAGGGGAAGCTCCCACTCCAAAGTGCACCGAAGCCA...AAGATGACCAAACACCGAGCCAATCATACATTGATGACAGTACTTTAAGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR TCA 72 bp ACAAGCTCAGAATGCTACCTCTCCCAAATGGCCTGGTaGGAACTGTGCCCATCACTGACATCACAAGCTTTG +
Preference number: 3 (lower is better)
Translates to: TSSECYLSQMAW*ELCPSLTSQAL
Trigger: CAAAGCTTGTGATGTCAGTGATGGGCACAGTTCTCACCAGGCCATTTGGGAGAGGTAGCATTCTGAGCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR TCA 72 bp CAGCTAACGCTTCAGAAGCATTTTGAGCTGCCCAGTTaGGCTGCGGAACTTTACCAGTCACTGGTTGTTAGC +
Preference number: 3 (lower is better)
Translates to: QLTLQKHFELPS*AAELYQSLVVS
Trigger: GCTAACAACCAGTGACTGGTAAAGTTCCGCAGCTCAACTGGGCAGCTCAAAATGCTTCTGAAGCGTTAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR TCA 72 bp CAGTCAGCCACGCAGAGAAAGACACCTGCAGAGCCATaGTCCCTTGGAACTTGGAGGGTCAAATTGAATTCT +
Preference number: 3 (lower is better)
Translates to: QSATQRKTPAEP*SLGTWRVKLNS
Trigger: AGAATTCAATTTGACCCTCCAAGTTCCAAGGGATCATGGCTCTGCAGGTGTCTTTCTCTGCGTGGCTGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR GCA 72 bp GAGTCTCACCATCTTGATGAGACCATCTTAGACACATaGGCATATCCTATCTGCCATGTGCTTCCCACCACC +
Preference number: 3 (lower is better)
Translates to: ESHHLDETILDT*AYPICHVLPTT
Trigger: GGTGGTGGGAAGCACATGGCAGATAGGATATGCGCATGTGTCTAAGATGGTCTCATCAAGATGGTGAGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CCA 72 bp GTCCTCTCCTGTTCACAGGGCACTCGGTTCTTCCAATaGCTACGTTCAGAGGGTCAGAGACTAATGTATTGT +
Preference number: 3 (lower is better)
Translates to: VLSCSQGTRFFQ*LRSEGQRLMYC
Trigger: ACAATACATTAGTCTCTGACCCTCTGAACGTAGCCATTGGAAGAACCGAGTGCCCTGTGAACAGGAGAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CCA 72 bp AAGCCTGTGAACAACAATAATAACGACACAGGCATATaGATCATAGAAGCCGTCACCACGGAGCCCCTCTGC +
Preference number: 3 (lower is better)
Translates to: KPVNNNNNDTGI*IIEAVTTEPLC
Trigger: GCAGAGGGGCTCCGTGGTGACGGCTTCTATGATCCATATGCCTGTGTCGTTATTATTGTTGTTCACAGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CCA 72 bp GGCTCTAACCTTCCATTTCTGCCTTTCCAGAGCCATTaGTACCTCACTCGGAAATACCCTTTTCCTAGTCGG +
Preference number: 3 (lower is better)
Translates to: GSNLPFLPFQSH*YLTRKYPFPSR
Trigger: CCGACTAGGAAAAGGGTATTTCCGAGTGAGGTACCAATGGCTCTGGAAAGGCAGAAATGGAAGGTTAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp GACGCGGGAGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGGCAACTGTATGACATaGAAAAACACATGTTCCACT +
Preference number: 3 (lower is better)
Translates to: DAGAEVCTSPLLLFGCYRGNCMT*KNTCST
Trigger: AGTGGAACATGTGTTTTTCAATGTCATACAGTTGCC...TCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCTCCCGCGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp GAGAGAGCTGCCACTGTGTTTCTGGGGGATCTTGAGTCACTCCGTTTGTCTGCTTATTGGTTTTCCCTATaGGGTGTGCACACATCCTAT +
Preference number: 3 (lower is better)
Translates to: ERAATVFLGDLESLRLSAYWFSL*GVHTSY
Trigger: ATAGGATGTGTGCACACCCAATAGGGAAAACCAATA...AGCAGACAAACGGAGTGACTCAAGATCCCCCAGAAACACAGTGGCAGCTCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp TATAGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCTGCTTTCAACAATGCTaGATGTGTTGGAAGCCAGGC +
Preference number: 3 (lower is better)
Translates to: YRPAGSNTTLWHFRMEIGCFQQC*MCWKPG
Trigger: GCCTGGCTTCCAACACATCAAGCATTGTTGAAAGCA...GCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp ACACATGTTCCACTTACAGTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTGTACTGGCGCGGAAGTaGAAGGTTGGACCAGCTCCG +
Preference number: 3 (lower is better)
Translates to: THVPLTVCRLSYVCSDTVVLARK*KVGPAP
Trigger: CGGAGCTGGTCCAACCTTCAACTTCCGCGCCAGTAC...AACTGTATCTGAGCACACATAGGAAAGTCTACACACTGTAAGTGGAACATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR TCA 72 bp TCTCCCAAATGGCCTGGTGAGAACTGTGCCCATCACTaGCATCACAAGCTTTGCCTTCAAGTACACTTTGTG +
Preference number: 3 (lower is better)
Translates to: SPKWPGENCAHH*HHKLCLQVHFV
Trigger: CACAAAGTGTACTTGAAGGCAAAGCTTGTGATGTCAGTGATGGGCACAGTTCTCACCAGGCCATTTGGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CCA 72 bp CAGATGTATGCAGTGCTTCTCAGAAAACAGGGACTTTaGCAGAAGCGCCTTTCCTGTAGGACTGAAGAGCAA +
Preference number: 3 (lower is better)
Translates to: QMYAVLLRKQGL*QKRLSCRTEEQ
Trigger: TTGCTCTTCAGTCCTACAGGAAAGGCGCTTCTGCCAAAGTCCCTGTTTTCTGAGAAGCACTGCATACATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CCA 72 bp CAGTATTCTGCTCTTCCAATGTGGAAACAGTGGTGGTaGAATAGGTATCTAGGTGGGAGGAGGAGACAAGGA +
Preference number: 3 (lower is better)
Translates to: QYSALPMWKQWW*NRYLGGRRRQG
Trigger: TCCTTGTCTCCTCCTCCCACCTAGATACCTATTCCACCACCACTGTTTCCACATTGGAAGAGCAGAATACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CCA 72 bp CACGCAGAGAAAGACACCTGCAGAGCCATGATCCCTTaGAACTTGGAGGGTCAAATTGAATTCTCTTCCAGA +
Preference number: 3 (lower is better)
Translates to: HAEKDTCRAMIP*NLEGQIEFSSR
Trigger: TCTGGAAGAGAATTCAATTTGACCCTCCAAGTTCCAAGGGATCATGGCTCTGCAGGTGTCTTTCTCTGCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CCA 72 bp AAAGTACTGTCATCAATGTATGATTGGCTCGGTGTTTaGTCATCTTGGCTGCAGCCTTCAGCCAGGTCTTCC +
Preference number: 3 (lower is better)
Translates to: KVLSSMYDWLGV*SSWLQPSARSS
Trigger: GGAAGACCTGGCTGAAGGCTGCAGCCAAGATGACCAAACACCGAGCCAATCATACATTGATGACAGTACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CCA 72 bp TGCGCAGGCCTTAAAGTACTGTCATCAATGTATGATTaGCTCGGTGTTTGGTCATCTTGGCTGCAGCCTTCA +
Preference number: 3 (lower is better)
Translates to: CAGLKVLSSMYD*LGVWSSWLQPS
Trigger: TGAAGGCTGCAGCCAAGATGACCAAACACCGAGCCAATCATACATTGATGACAGTACTTTAAGGCCTGCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CAA 90 bp TGGTGTTTAAATCACTGCTCCTCCACATTCCCTTTCCACTTGTGTTTCCTGAATCAGAAAACAGGGACTTaGGCAGAAGCGCCTTTCCTG +
Preference number: 3 (lower is better)
Translates to: WCLNHCSSTFPFHLCFLNQKTGT*AEAPFL
Trigger: CAGGAAAGGCGCTTCTGCCAAAGTCCCTGTTTTCTG...ATTCAGGAAACACAAGTGGAAAGGGAATGTGGAGGAGCAGTGATTTAAACACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp GGCTCTAACCTTCCATTTCTGCCTTTCCAGAGCCATTGGTACCTCACTCGGAAAGCACACATCCTATTTTaGCACTCATTAAGGTCTCCT +
Preference number: 3 (lower is better)
Translates to: GSNLPFLPFQSHWYLTRKAHILF*HSLRSP
Trigger: AGGAGACCTTAATGAGTGCAAAAATAGGATGTGTGC...TTTCCGAGTGAGGTACCAATGGCTCTGGAAAGGCAGAAATGGAAGGTTAGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp GGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAACATTTTTTTTCTTGGCTTGGGGTaGGAACACCTCTCCTGTTTC +
Preference number: 3 (lower is better)
Translates to: GTNPPVQISDLYSCRNIFFLGLG*EHLSCF
Trigger: GAAACAGGAGAGGTGTTCCAACCCCAAGCCAAGAAA...AAAAATGTTTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCC
47% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR TCA 72 bp CTCGCACTTCCTAACTCAATACCAGTAAAGGGGTGCTaGGGTGTTGAGATTCCAAACACCCATACCTCTTTG +
Preference number: 3 (lower is better)
Translates to: LALPNSIPVKGC*GVEIPNTHTSL
Trigger: CAAAGAGGTATGGGTGTTTGGAATCTCAACACCTCAGCACCCCTTTACTGGTATTGAGTTAGGAAGTGCGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR TCA 72 bp ATCAGGCCCAATCGTCGTAAACGTTGCTGTATCGGATaGGACAGAAGATCTGAGGCAGAAGGACAATCATAC +
Preference number: 3 (lower is better)
Translates to: IRPNRRKRCCIG*DRRSEAEGQSY
Trigger: GTATGATTGTCCTTCTGCCTCAGATCTTCTGTCTCATCCGATACAGCAACGTTTACGACGATTGGGCCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR GCA 72 bp GCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTaGTACAGAGCCATACATGTGAAAAGCAATACTCCA +
Preference number: 3 (lower is better)
Translates to: AEVCTSPLLLFG*YRAIHVKSNTP
Trigger: TGGAGTATTGCTTTTCACATGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR GCA 72 bp CCTGGTGCAGATGGATTTCCAGTACCTACAGATGTATaGAGTGCTTCTCAGAAAACAGGGACTTTGGCAGAA +
Preference number: 3 (lower is better)
Translates to: PGADGFPVPTDV*SASQKTGTLAE
Trigger: TTCTGCCAAAGTCCCTGTTTTCTGAGAAGCACTGCATACATCTGTAGGTACTGGAAATCCATCTGCACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CCA 72 bp CAACGAGAAACTGTAAACAAAGGTGGATGTCTGGACTaGCCTTTGACGACAGTGGTATTGGTGTGGACTTGT +
Preference number: 3 (lower is better)
Translates to: QRETVNKGGCLD*PLTTVVLVWTC
Trigger: ACAAGTCCACACCAATACCACTGTCGTCAAAGGCCAGTCCAGACATCCACCTTTGTTTACAGTTTCTCGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CCA 72 bp ACACAGTATTCTGCTCTTCCAATGTGGAAACAGTGGTaGTGGAATAGGTATCTAGGTGGGAGGAGGAGACAA +
Preference number: 3 (lower is better)
Translates to: TQYSALPMWKQW*WNRYLGGRRRQ
Trigger: TTGTCTCCTCCTCCCACCTAGATACCTATTCCACCACCACTGTTTCCACATTGGAAGAGCAGAATACTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp AGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACTTGAGATGTTTGTCTTaGCAGAGATGTAAACATCAG +
Preference number: 3 (lower is better)
Translates to: RPAGSNTTLWHFRMEIGNLRCLS*QRCKHQ
Trigger: CTGATGTTTACATCTCTGCAAAGACAAACATCTCAA...GTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp GCAGAAGGACAATCATACACTAGTAACAGAAGCTTGCAAGCAGTTGGAAGGTTTACCCCCAACCTGTGCTaGAGATGTTTGTCTTTGCAG +
Preference number: 3 (lower is better)
Translates to: AEGQSYTSNRSLQAVGRFTPNLC*RCLSLQ
Trigger: CTGCAAAGACAAACATCTCAAGCACAGGTTGGGGGT...AAACCTTCCAACTGCTTGCAAGCTTCTGTTACTAGTGTATGATTGTCCTTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp GGAAGGGGAACAACAGGCTTACAGTTGGAAGCCAAAGGATGTTGTGAAAGAAAACCTACTGCTATTCGGTaGCTACAGAGCCATACATGT +
Preference number: 3 (lower is better)
Translates to: GRGTTGLQLEAKGCCERKPTAIR*LQSHTC
Trigger: ACATGTATGGCTCTGTAGCAACCGAATAGCAGTAGG...TTTTCTTTCACAACATCCTTTGGCTTCCAACTGTAAGCCTGTTGTTCCCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp ATTTTGAGCTGCCCAGTTGAGCTGCGGAACTTTACCAGTCACTGGTTGTTAGCATATTGGTTTTCCCTATaGGGTGTGCACACATCCTAT +
Preference number: 3 (lower is better)
Translates to: ILSCPVELRNFTSHWLLAYWFSL*GVHTSY
Trigger: ATAGGATGTGTGCACACCCAATAGGGAAAACCAATA...TGCTAACAACCAGTGACTGGTAAAGTTCCGCAGCTCAACTGGGCAGCTCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp TGTACTAAGGATGACAAGGAATCATCATTTACAATATGGTACACGGACACGATATACCAAGGTCAGCCTTaGGACAGGGAGGTAGGCAGG +
Preference number: 3 (lower is better)
Translates to: CTKDDKESSFTIWYTDTIYQGQP*DREVGR
Trigger: CCTGCCTACCTCCCTGTCCAAAGGCTGACCTTGGTA...TATCGTGTCCGTGTACCATATTGTAAATGATGATTCCTTGTCATCCTTAGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp GTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCATACATGTGAAAAGGAAGCTTGCAAGCAGTaGGAAGGTTTCTGTAATTTC +
Preference number: 3 (lower is better)
Translates to: VHISPTAIRLLQSHTCEKEACKQ*EGFCNF
Trigger: GAAATTACAGAAACCTTCCAACTGCTTGCAAGCTTC...CTTTTCACATGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp GTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCATACATGTGAAAAGACTAGTAACAGAAGCTaGCAAGCAGTTGGAAGGTTT +
Preference number: 3 (lower is better)
Translates to: VHISPTAIRLLQSHTCEKTSNRS*QAVGRF
Trigger: AAACCTTCCAACTGCTTGCAAGCTTCTGTTACTAGT...CTTTTCACATGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR GCA 72 bp ATGGGGAAATGGGACTCGATCACGTTCGTGTTGCTATaGATGATGAAGTTGTCCCCTTTGTGTTCAATGATG +
Preference number: 3 (lower is better)
Translates to: MGKWDSITFVLL*MMKLSPLCSMM
Trigger: CATCATTGAACACAAAGGGGACAACTTCATCATGCATAGCAACACGAACGTGATCGAGTCCCATTTCCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CCA 72 bp AATGACAGGAACCCAACGAGAAACTGTAAACAAAGGTaGATGTCTGGACTGGCCTTTGACGACAGTGGTATT +
Preference number: 3 (lower is better)
Translates to: NDRNPTRNCKQR*MSGLAFDDSGI
Trigger: AATACCACTGTCGTCAAAGGCCAGTCCAGACATCCACCTTTGTTTACAGTTTCTCGTTGGGTTCCTGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CCA 72 bp AGCACTAGAAGGTTCCTTGCTGCCACCAACTATTTCTaGAATGCATACCTCTTTGTAGCTGGCAGAAGGAAT +
Preference number: 3 (lower is better)
Translates to: STRRFLAATNYF*NAYLFVAGRRN
Trigger: ATTCCTTCTGCCAGCTACAAAGAGGTATGCATTCCAGAAATAGTTGGTGGCAGCAAGGAACCTTCTAGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR-3UTR CAA 90 bp GTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGGCAACTGTATGACATaGAAAAACACATGTTCCACT +
Preference number: 3 (lower is better)
Translates to: VCRLSYVCSDTVSDAGAEGNCMT*KNTCST
Trigger: AGTGGAACATGTGTTTTTCAATGTCATACAGTTGCC...TTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp CATCTTGCTATGCTAATGGCTGCTGGTCTAAGGGAGGTTCTTTTGTTTATTTATCTCCTGCCAAGCCTTTaGATACTGAGCATGGCGTCA +
Preference number: 3 (lower is better)
Translates to: HLAMLMAAGLREVLLFIYLLPSL*ILSMAS
Trigger: TGACGCCATGCTCAGTATCAAAAGGCTTGGCAGGAG...ATAAATAAACAAAAGAACCTCCCTTAGACCAGCAGCCATTAGCATAGCAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR TCA 72 bp GACCCACTCTCATGGGCTCCTCCCGCAAGAGTGTTGTaGAAACTCACAGTGAAAAATGACTGGTATTTTAAA +
Preference number: 3 (lower is better)
Translates to: DPLSWAPPARVL*KLTVKNDWYFK
Trigger: TTTAAAATACCAGTCATTTTTCACTGTGAGTTTTCACAACACTCTTGCGGGAGGAGCCCATGAGAGTGGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR TCA 72 bp CTAAGGACTTTACATTTGTACCTGTTGACACTTACATaGAGTGACTCTAGGGCAGCTCTACTCCTAACTGGC +
Preference number: 3 (lower is better)
Translates to: LRTLHLYLLTLT*SDSRAALLLTG
Trigger: GCCAGTTAGGAGTAGAGCTGCCCTAGAGTCACTTCATGTAAGTGTCAACAGGTACAAATGTAAAGTCCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR GCA 72 bp ATACAATCACAAGACCGCTCGTTTCCCCTGGAGCTTTaGCGAATTCTAAATTTTGCAACCATTAAGCCTGTG +
Preference number: 3 (lower is better)
Translates to: IQSQDRSFPLEL*RILNFATIKPV
Trigger: CACAGGCTTAATGGTTGCAAAATTTAGAATTCGGCAAAGCTCCAGGGGAAACGAGCGGTCTTGTGATTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp TGGGGTTATCACAGAAATGACAGGAACCCAACGAGAAACTGTAAACAAAGGTGGGTTGACCCTTTAAAGTaGAATGCCTCACAGAGATTC +
Preference number: 3 (lower is better)
Translates to: WGYHRNDRNPTRNCKQRWVDPLK*NASQRF
Trigger: GAATCTCTGTGAGGCATTCAACTTTAAAGGGTCAAC...CCACCTTTGTTTACAGTTTCTCGTTGGGTTCCTGTCATTTCTGTGATAACCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp GACACACATGCAACACCATGGCCTACTGCTGAAAAGCGTTTGAAACATTGCTTTACTAGTAACAGAAGCTaGCAAGCAGTTGGAAGGTTT +
Preference number: 3 (lower is better)
Translates to: DTHATPWPTAEKRLKHCFTSNRS*QAVGRF
Trigger: AAACCTTCCAACTGCTTGCAAGCTTCTGTTACTAGT...AAAGCAATGTTTCAAACGCTTTTCAGCAGTAGGCCATGGTGTTGCATGTGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
3UTR TCA 72 bp GCTGAGGTGTTGAGATTCCAAACACCCATACCTCTTTaGATGAAATGGACAAGGTGTCAAGCTGCATTTGTT +
Preference number: 3 (lower is better)
Translates to: AEVLRFQTPIPL*MKWTRCQAAFV
Trigger: AACAAATGCAGCTTGACACCTTGTCCATTTCATTCAAAGAGGTATGGGTGTTTGGAATCTCAACACCTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp CTTTGCAGAGATGTAAACATCAGGCCCAATCGTCGTAAACGTTGCTGTATCGGATTGAGATGTTTGTCTTaGCAGAGATGTAAACATCAG +
Preference number: 3 (lower is better)
Translates to: LCRDVNIRPNRRKRCCIGLRCLS*QRCKHQ
Trigger: CTGATGTTTACATCTCTGCAAAGACAAACATCTCAA...TCCGATACAGCAACGTTTACGACGATTGGGCCTGATGTTTACATCTCTGCAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp TGGTATATCATCTTTAAAGCCCATCTTGCTATGCTAATGGCTGCTGGTCTAAGGCAACGCTCCCTAAATTaGCTCTTTCTTACAACCACT +
Preference number: 3 (lower is better)
Translates to: WYIIFKAHLAMLMAAGLRQRSLN*LFLTTT
Trigger: AGTGGTTGTAAGAAAGAGCAAATTTAGGGAGCGTTG...CCTTAGACCAGCAGCCATTAGCATAGCAAGATGGGCTTTAAAGATGATATACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp GGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAACATTTTTTTGAGACCGAATTTTTaGGACTGCTTTTCACCATCT +
Preference number: 3 (lower is better)
Translates to: GTNPPVQISDLYSCRNIFLRPNF*DCFSPS
Trigger: AGATGGTGAAAAGCAGTCCAAAAAATTCGGTCTCAA...AAAAATGTTTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCC
42% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR GCA 72 bp AGGCAGAAGGACAATCATACACTAGTAACAGAAGCTTaGAAGCAGTTGGAAGGTTTCTGTAATTTCTCAGCT +
Preference number: 3 (lower is better)
Translates to: RQKDNHTLVTEA*KQLEGFCNFSA
Trigger: AGCTGAGAAATTACAGAAACCTTCCAACTGCTTGCAAGCTTCTGTTACTAGTGTATGATTGTCCTTCTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp TTCTTCTTTCCTATTGGTTTTCCCTATTGGGTGTGCACACATCCTATTTTTGCAACAACAGGCTTACAGTaGGAAGCCAAAGGATGTTGT +
Preference number: 3 (lower is better)
Translates to: FFFPIGFPYWVCTHPIFATTGLQ*EAKGCC
Trigger: ACAACATCCTTTGGCTTCCAACTGTAAGCCTGTTGT...TGCAAAAATAGGATGTGTGCACACCCAATAGGGAAAACCAATAGGAAAGAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp CACATGTTCCACTTACAGTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGAAGCTTGCAAGCAGTaGGAAGGTTTCTGTAATTTC +
Preference number: 3 (lower is better)
Translates to: HMFHLQCVDFPMCAQIQLEACKQ*EGFCNF
Trigger: GAAATTACAGAAACCTTCCAACTGCTTGCAAGCTTC...TAACTGTATCTGAGCACACATAGGAAAGTCTACACACTGTAAGTGGAACATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp GCAGAAGGACAATCATACACTAGTAACAGAAGCTTGCAAGCAGTTGGAAGGTTTTTGAGATGTTTGTCTTaGCAGAGATGTAAACATCAG +
Preference number: 3 (lower is better)
Translates to: AEGQSYTSNRSLQAVGRFLRCLS*QRCKHQ
Trigger: CTGATGTTTACATCTCTGCAAAGACAAACATCTCAA...AAACCTTCCAACTGCTTGCAAGCTTCTGTTACTAGTGTATGATTGTCCTTCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp ACACATGTTCCACTTACAGTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTCTGTGCTTGAGATGTTaGTCTTTGCAGAGATGTAAA +
Preference number: 3 (lower is better)
Translates to: THVPLTVCRLSYVCSDTVLCLRC*SLQRCK
Trigger: TTTACATCTCTGCAAAGACAAACATCTCAAGCACAG...AACTGTATCTGAGCACACATAGGAAAGTCTACACACTGTAAGTGGAACATGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp GAGCTTTGCCGAATTCTAAATTTTGCAACCATTAAGCCTGTGAACAACAATAATCTTAAGGAGCCCAGTTaGACCCAACACAACTTCCAA +
Preference number: 3 (lower is better)
Translates to: ELCRILNFATIKPVNNNNLKEPS*TQHNFQ
Trigger: TTGGAAGTTGTGTTGGGTCAAACTGGGCTCCTTAAG...ATTATTGTTGTTCACAGGCTTAATGGTTGCAAAATTTAGAATTCGGCAAAGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp CTGGAGCTTTGCCGAATTCTAAATTTTGCAACCATTAAGCCTGTGAACAACAATAACACCCATACCTCTTaGAATGAAATGGACAAGGTG +
Preference number: 3 (lower is better)
Translates to: LELCRILNFATIKPVNNNNTHTS*NEMDKV
Trigger: CACCTTGTCCATTTCATTCAAAGAGGTATGGGTGTT...ATTGTTGTTCACAGGCTTAATGGTTGCAAAATTTAGAATTCGGCAAAGCTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CCA 72 bp GAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTaGCAACTGTATGACATTGAAAAACACATGTTCCAC +
Preference number: 3 (lower is better)
Translates to: EQHNSVAFQNGN*QLYDIEKHMFH
Trigger: GTGGAACATGTGTTTTTCAATGTCATACAGTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp CTGGAGCTTTGCCGAATTCTAAATTTTGCAACCATTAAGCCTGTGAACAACAATGGTGTCAAGCTGCATTaGTTTTCTTTATTAGCACAC +
Preference number: 3 (lower is better)
Translates to: LELCRILNFATIKPVNNNGVKLH*FSLLAH
Trigger: GTGTGCTAATAAAGAAAACAAATGCAGCTTGACACC...ATTGTTGTTCACAGGCTTAATGGTTGCAAAATTTAGAATTCGGCAAAGCTCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR-3UTR CAA 90 bp TCCCTAAATTTGCTCTTTCTTACAACCACTAAAAATCATCTCCCACAGCCTAATCTGTGCTTGAGATGTTaGTCTTTGCAGAGATGTAAA +
Preference number: 3 (lower is better)
Translates to: SLNLLFLTTTKNHLPQPNLCLRC*SLQRCK
Trigger: TTTACATCTCTGCAAAGACAAACATCTCAAGCACAG...ATTAGGCTGTGGGAGATGATTTTTAGTGGTTGTAAGAAAGAGCAAATTTAGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR TCA 72 bp TTGACCCAACACAACTTCCAAATAGCAGACCAAATATaGGTATATGTGTTTCCACCTACTTCATATAACTGT +
Preference number: 3 (lower is better)
Translates to: LTQHNFQIADQI*VYVFPPTSYNC
Trigger: ACAGTTATATGAAGTAGGTGGAAACACATATACTCATATTTGGTCTGCTATTTGGAAGTTGTGTTGGGTCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR TCA 72 bp ATAATATATAAGTGTGCAAAATGCCGACAGATGTGTTaGCCCTTTAAAGTTGAATGCCTCACAGAGATTCAA +
Preference number: 3 (lower is better)
Translates to: IIYKCAKCRQMC*PFKVECLTEIQ
Trigger: TTGAATCTCTGTGAGGCATTCAACTTTAAAGGGTCAACACATCTGTCGGCATTTTGCACACTTATATATTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR TCA 72 bp AGATTCAAAGCCAATTGCCTTAAAGCATTTCAACAATaGAGCGGTATATTGAGAATCTTGCTTAAGCTTCAT +
Preference number: 3 (lower is better)
Translates to: RFKANCLKAFQQ*SGILRILLKLH
Trigger: ATGAAGCTTAAGCAAGATTCTCAATATACCGCTTCATTGTTGAAATGCTTTAAGGCAATTGGCTTTGAATCT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR TCA 72 bp TCAATCAGGGAGAAGCCAGTACCTTTTGCAAACACATaGGATCTAATAATAAAATGTCTCCTGTGTATAATT +
Preference number: 3 (lower is better)
Translates to: SIREKPVPFANT*DLIIKCLLCII
Trigger: AATTATACACAGGAGACATTTTATTATTAGATCTCATGTGTTTGCAAAAGGTACTGGCTTCTCCCTGATTGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CCA 72 bp TGTACTAAGGATGACAAGGAATCATCATTTACAATATaGTACACGGACACGATAAAAACCATGTTACAAATG +
Preference number: 3 (lower is better)
Translates to: CTKDDKESSFTI*YTDTIKTMLQM
Trigger: CATTTGTAACATGGTTTTTATCGTGTCCGTGTACCATATTGTAAATGATGATTCCTTGTCATCCTTAGTACA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp AAGCCGTCACCACGGAGCCCCTCTGCATTGCTGACGCAAGCCAAGGGGACGGGCCCCGAGGGATGGTCGTaGGCGTGTCCTCGTCTCGCA +
Preference number: 4 (lower is better)
Translates to: KPSPRSPSALLTQAKGTGPEGWS*ACPRLA
Trigger: TGCGAGACGAGGACACGCCCACGACCATCCCTCGGG...GCCCGTCCCCTTGGCTTGCGTCAGCAATGCAGAGGGGCTCCGTGGTGACGGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp CTCAGCTTCGCTGGTCGGGGGATCCGTACTGGCGCGGAAGTTGAAGGTTGGACCTCAGTGGGCGGCACCTaGCAGAGCGGAGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LSFAGRGIRTGAEVEGWTSVGGT*QSGGGQ
Trigger: CTGCCCTCCTCCGCTCTGCCAGGTGCCGCCCACTGA...GGTCCAACCTTCAACTTCCGCGCCAGTACGGATCCCCCGACCAGCGAAGCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR CAA 72 bp GCTTCGCTGGTCGGGGGATCCGTACTGGCGCGGAAGTaGAAGGTTGGACCAGCTCCGCCATGGGCTGGACTC +
Preference number: 4 (lower is better)
Translates to: ASLVGGSVLARK*KVGPAPPWAGL
Trigger: GAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAACTTCCGCGCCAGTACGGATCCCCCGACCAGCGAAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp CTGGTCGGGGGATCCGTACTGGCGCGGAAGTTGAAGGTTGGACCAGCTCCGCCACCTCCAGGCTCCTGCTaGCGTTGGGATGGAGGCATG +
Preference number: 4 (lower is better)
Translates to: LVGGSVLARKLKVGPAPPPPGSC*RWDGGM
Trigger: CATGCCTCCATCCCAACGTCAGCAGGAGCCTGGAGG...TGGCGGAGCTGGTCCAACCTTCAACTTCCGCGCCAGTACGGATCCCCCGACCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp CTGGTCGGGGGATCCGTACTGGCGCGGAAGTTGAAGGTTGGACCAGCTCCGCCACTCCTTCCACTGTGGTaGGCGGAGGACCCGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LVGGSVLARKLKVGPAPPLLPLW*AEDPAL
Trigger: CAAAGCCGGGTCCTCCGCCCACCACAGTGGAAGGAG...TGGCGGAGCTGGTCCAACCTTCAACTTCCGCGCCAGTACGGATCCCCCGACCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp CTGGTCGGGGGATCCGTACTGGCGCGGAAGTTGAAGGTTGGACCAGCTCCGCCATTACTCCTTCCACTGTaGTGGGCGGAGGACCCGGCT +
Preference number: 4 (lower is better)
Translates to: LVGGSVLARKLKVGPAPPLLLPL*WAEDPA
Trigger: AGCCGGGTCCTCCGCCCACCACAGTGGAAGGAGTAA...TGGCGGAGCTGGTCCAACCTTCAACTTCCGCGCCAGTACGGATCCCCCGACCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp CTGGTCGGGGGATCCGTACTGGCGCGGAAGTTGAAGGTTGGACCAGCTCCGCCAAGGCAGAGGGCGTTATaGTTCCTGGTTGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: LVGGSVLARKLKVGPAPPRQRAL*FLVVAR
Trigger: CCTCGCCACAACCAGGAACCATAACGCCCTCTGCCT...TGGCGGAGCTGGTCCAACCTTCAACTTCCGCGCCAGTACGGATCCCCCGACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp CGACACAGGCATATGGATCATAGAAGCCGTCACCACGGAGCCCCTCTGCATTGCTCAGTGGGCGGCACCTaGCAGAGCGGAGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RHRHMDHRSRHHGAPLHCSVGGT*QSGGGQ
Trigger: CTGCCCTCCTCCGCTCTGCCAGGTGCCGCCCACTGA...GCAATGCAGAGGGGCTCCGTGGTGACGGCTTCTATGATCCATATGCCTGTGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp CTGATTCATCCCTCCGGGTCATCCACGCACCCTCCTCCAGCACTCAGTGCTGTGTCGCGTCTTGCTGTGTaGCCGAGACTTCCCGTGGGA +
Preference number: 4 (lower is better)
Translates to: LIHPSGSSTHPPPALSAVSRLAV*PRLPVG
Trigger: TCCCACGGGAAGTCTCGGTCACACAGCAAGACGCGA...CACAGCACTGAGTGCTGGAGGAGGGTGCGTGGATGACCCGGAGGGATGAATCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp TTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTCTGACGGCGGTTGCTCCTGGCCCTTTCGGTaGCTCCTCCTTGTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: LDQLRHGLDSKQDSDGGCSWPFR*LLLVPN
Trigger: GTTGGGCACAAGGAGGAGTCACCGAAAGGGCCAGGA...GCAACCGCCGTCAGAATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp CTGGTCGGGGGATCCGTACTGGCGCGGAAGTTGAAGGTTGGACCAGCTCCGCCAACGGGTGACTTTGGGTaGGACTTGAGGAGGGACAAG +
Preference number: 4 (lower is better)
Translates to: LVGGSVLARKLKVGPAPPTGDFG*DLRRDK
Trigger: CTTGTCCCTCCTCAAGTCTCACCCAAAGTCACCCGT...TGGCGGAGCTGGTCCAACCTTCAACTTCCGCGCCAGTACGGATCCCCCGACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp TATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCCCCGCTGCGGGACCTCATaGGGTCCGAGGCCCGGTCCG +
Preference number: 4 (lower is better)
Translates to: YVCSDTVSDAGAEVCTSPRCGTS*GPRPGP
Trigger: CGGACCGGGCCTCGGACCGCATGAGGTCCCGCAGCG...GGGAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211737.2
CDS-3UTR GCA 90 bp TGTGTTGGAAGCCAGGCTCTCCCGAGTGCAGTCCAGATTAGTGATCTCTACAGCCACACCACCAGAGGCTaGAGGGCCCCCTCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: CVGSQALPSAVQISDLYSHTTRG*RAPSWP
Trigger: GGGCCAGGAGGGGGCCCTGCAGCCTCTGGTGGTGTG...GCTGTAGAGATCACTAATCTGGACTGCACTCGGGAGAGCCTGGCTTCCAACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp TCAGCCCGAGGCCGTGAGAGTCAAGAGTCTCACCATCTTGATGAGACCATCTTACCCGGGCTTCTCCTCTaGGGAGCTGTCGGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: SARGRESQESHHLDETILPGLLL*GAVGRA
Trigger: GGCCCGGCCGACAGCTCCGCAGAGGAGAAGCCCGGG...TAAGATGGTCTCATCAAGATGGTGAGACTCTTGACTCTCACGGCCTCGGGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp AAGCCGTCACCACGGAGCCCCTCTGCATTGCTGACGCAAGCCAAGGGGACGGGCTCTTCTCGGCAGCAGTaGCAAGAGTCGCAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: KPSPRSPSALLTQAKGTGSSRQQ*QESQCF
Trigger: AAAGCACTGCGACTCTTGCCACTGCTGCCGAGAAGA...GCCCGTCCCCTTGGCTTGCGTCAGCAATGCAGAGGGGCTCCGTGGTGACGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp CGACACAGGCATATGGATCATAGAAGCCGTCACCACGGAGCCCCTCTGCATTGCGCCGGGCTGAGTGGGTaGCTCTCTGGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RHRHMDHRSRHHGAPLHCAGLSG*LSGCCC
Trigger: GCAGCAGCAACCAGAGAGCCACCCACTCAGCCCGGC...GCAATGCAGAGGGGCTCCGTGGTGACGGCTTCTATGATCCATATGCCTGTGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp CTGATTCATCCCTCCGGGTCATCCACGCACCCTCCTCCAGCACTCAGTGCTGTGCCGTGGGACTTGCGGTaGGTCCGGCTCTTTTTACTC +
Preference number: 4 (lower is better)
Translates to: LIHPSGSSTHPPPALSAVPWDLR*VRLFLL
Trigger: GAGTAAAAAGAGCCGGACTCACCGCAAGTCCCACGG...CACAGCACTGAGTGCTGGAGGAGGGTGCGTGGATGACCCGGAGGGATGAATCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp CTCAGCTTCGCTGGTCGGGGGATCCGTACTGGCGCGGAAGTTGAAGGTTGGACCTGCAGGGTGGAGGCATaGATGCTGTGCACGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LSFAGRGIRTGAEVEGWTCRVEA*MLCTSS
Trigger: AGAAGACGTGCACAGCATGCATGCCTCCACCCTGCA...GGTCCAACCTTCAACTTCCGCGCCAGTACGGATCCCCCGACCAGCGAAGCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp AGTTGGAAGGTTTCTGTAATTTCTCAGCTTCGCTGGTCGGGGGATCCGTACTGGCACACCACCAGAGGCTaGAGGGCCCCCTCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: SWKVSVISQLRWSGDPYWHTTRG*RAPSWP
Trigger: GGGCCAGGAGGGGGCCCTGCAGCCTCTGGTGGTGTG...CCAGTACGGATCCCCCGACCAGCGAAGCTGAGAAATTACAGAAACCTTCCAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp CTGATTCATCCCTCCGGGTCATCCACGCACCCTCCTCCAGCACTCAGTGCTGTGTCCATCAGCGCCTCCTaGGTGACAGGCTTTCTCGCA +
Preference number: 4 (lower is better)
Translates to: LIHPSGSSTHPPPALSAVSISAS*VTGFLA
Trigger: TGCGAGAAAGCCTGTCACCCAGGAGGCGCTGATGGA...CACAGCACTGAGTGCTGGAGGAGGGTGCGTGGATGACCCGGAGGGATGAATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp CTCAGCTTCGCTGGTCGGGGGATCCGTACTGGCGCGGAAGTTGAAGGTTGGACCACTTCCTCTGCAGGGTaGAGGCATGCATGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: LSFAGRGIRTGAEVEGWTTSSAG*RHACCA
Trigger: TGCACAGCATGCATGCCTCCACCCTGCAGAGGAAGT...GGTCCAACCTTCAACTTCCGCGCCAGTACGGATCCCCCGACCAGCGAAGCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GACGCGGGAGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGACCCGAGGGATGGTCGTaGGCGTGTCCTCGTCTCGCA +
Preference number: 4 (lower is better)
Translates to: DAGAEVCTSPLLLFGCYRPEGWS*ACPRLA
Trigger: TGCGAGACGAGGACACGCCCACGACCATCCCTCGGG...TCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCTCCCGCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GCGGGAGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCTCCAGCCGGGCTGAGTaGGTGGCTCTCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: AGAEVCTSPLLLFGCYRASSRAE*VALWLL
Trigger: CAGCAACCAGAGAGCCACCCACTCAGCCCGGCTGGA...GGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCTCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR CAA 72 bp GAGCCATCCGAAGGATCTCCTTTGGACACTCGCGTCTaGCTGTGTGACCGAGACTTCCCGTGGGACTTGCGG +
Preference number: 4 (lower is better)
Translates to: EPSEGSPLDTRV*LCDRDFPWDLR
Trigger: CCGCAAGTCCCACGGGAAGTCTCGGTCACACAGCAAGACGCGAGTGTCCAAAGGAGATCCTTCGGATGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
CDS-3UTR TCA 90 bp GTTGAAGGTTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTCTGACGTCCTGGCCCTTTCGGTaGCTCCTCCTTGTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: VEGWTSSAMGWTQSRILTSWPFR*LLLVPN
Trigger: GTTGGGCACAAGGAGGAGTCACCGAAAGGGCCAGGA...CGTCAGAATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp GACGCGGGAGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGGTAGTCCTTCTCGCTaGGGGACCTCATGCGGTCCG +
Preference number: 4 (lower is better)
Translates to: DAGAEVCTSPLLLFGCYRGSPSR*GTSCGP
Trigger: CGGACCGCATGAGGTCCCGCAGCGAGAAGGACTACC...TCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCTCCCGCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211737.2
CDS-3UTR GCA 90 bp GCGGGAGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCGGGTGGAGGCATGCATaGTGTGCACGTCTTCTCGGC +
Preference number: 4 (lower is better)
Translates to: AGAEVCTSPLLLFGCYRAGWRHA*CARLLG
Trigger: GCCGAGAAGACGTGCACAGCATGCATGCCTCCACCC...GGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCTCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp GTTGAAGGTTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTCTGACGCGCAGCGCCTCTAGATaGTCCTCCTTGCCCTGGATC +
Preference number: 4 (lower is better)
Translates to: VEGWTSSAMGWTQSRILTRSASR*SSLPWI
Trigger: GATCCAGGGCAAGGAGGAGCATCTAGAGGCGCTGCG...CGTCAGAATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TACTCCTTCCACTGTGGTGGGCGGAGGACCCGGCTTTGCTCCGGTGAGCTTTTTTCCATCAGCGCCTCCTaGGTGACAGGCTTTCTCGCA +
Preference number: 4 (lower is better)
Translates to: YSFHCGGRRTRLCSGELFSISAS*VTGFLA
Trigger: TGCGAGAAAGCCTGTCACCCAGGAGGCGCTGATGGA...AAAAAGCTCACCGGAGCAAAGCCGGGTCCTCCGCCCACCACAGTGGAAGGAGTA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
CDS-3UTR CCA 90 bp GTGTTGGAAGCCAGGCTCTCCCGAGTGCAGTCCAGATTAGTGATCTCTACAGCTCCCGAGGGATGGTCGTaGGCGTGTCCTCGTCTCGCA +
Preference number: 4 (lower is better)
Translates to: VLEARLSRVQSRLVISTAPEGWS*ACPRLA
Trigger: TGCGAGACGAGGACACGCCCACGACCATCCCTCGGG...AGCTGTAGAGATCACTAATCTGGACTGCACTCGGGAGAGCCTGGCTTCCAACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GTTGAAGGTTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTCTGACGAGTGGGAGCTTCCCCTaGAGGGTTCGGGAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: VEGWTSSAMGWTQSRILTSGSFP*RVRERA
Trigger: TGCCCTTTCCCGAACCCTCCAGGGGAAGCTCCCACT...CGTCAGAATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GTTGAAGGTTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTCTGACGCTGGATCTCCGGTCCTaGGTATGGCTGTGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: VEGWTSSAMGWTQSRILTLDLRS*VWLWLR
Trigger: CCGAAGCCACAGCCATACCCAGGACCGGAGATCCAG...CGTCAGAATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GACGCGGGAGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGTTGGGATGGAGGCATaGCTTGGGCCGCGGATGTCC +
Preference number: 4 (lower is better)
Translates to: DAGAEVCTSPLLLFGCYRVGMEA*LGPRMS
Trigger: GGACATCCGCGGCCCAAGCCATGCCTCCATCCCAAC...TCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCTCCCGCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GACGCGGGAGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGACTGCTGACGTTGGGATaGAGGCATGGCTTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: DAGAEVCTSPLLLFGCYRLLTLG*RHGLGR
Trigger: GCGGCCCAAGCCATGCCTCCATCCCAACGTCAGCAG...TCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCTCCCGCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp CTCAGCTTCGCTGGTCGGGGGATCCGTACTGGCGCGGAAGTTGAAGGTTGGACCGAGTGGGTGGCTCTCTaGTTGCTGCTGCTATCAGTT +
Preference number: 4 (lower is better)
Translates to: LSFAGRGIRTGAEVEGWTEWVAL*LLLLSV
Trigger: AACTGATAGCAGCAGCAACCAGAGAGCCACCCACTC...GGTCCAACCTTCAACTTCCGCGCCAGTACGGATCCCCCGACCAGCGAAGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GAAGCCAGGCTCTCCCGAGTGCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAGCCGGGCTGAGTGGGTaGCTCTCTGGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: EARLSRVQSRLVISTAAEAGLSG*LSGCCC
Trigger: GCAGCAGCAACCAGAGAGCCACCCACTCAGCCCGGC...TTCTGCAGCTGTAGAGATCACTAATCTGGACTGCACTCGGGAGAGCCTGGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp GAAGTTGAAGGTTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTCTGTTCCCTGACGCAGCCTaGGGCAGAGGGCGTTATGGT +
Preference number: 4 (lower is better)
Translates to: EVEGWTSSAMGWTQSRILFPDAA*GRGRYG
Trigger: ACCATAACGCCCTCTGCCTCAGGCTGCGTCAGGGAA...CAGAATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp GACGCGGGAGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGATTCCCTGACGCAGCCTaGGGCAGAGGGCGTTATGGT +
Preference number: 4 (lower is better)
Translates to: DAGAEVCTSPLLLFGCYRFPDAA*GRGRYG
Trigger: ACCATAACGCCCTCTGCCTCAGGCTGCGTCAGGGAA...TCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCTCCCGCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp GCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCCACACCACCAGAGGCTaGAGGGCCCCCTCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: AIFREGTNPPVQISDLYSHTTRG*RAPSWP
Trigger: GGGCCAGGAGGGGGCCCTGCAGCCTCTGGTGGTGTG...GCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp GCGGGAGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCTCCATCAGCGCCTCCTaGGTGACAGGCTTTCTCGCA +
Preference number: 4 (lower is better)
Translates to: AGAEVCTSPLLLFGCYRASISAS*VTGFLA
Trigger: TGCGAGAAAGCCTGTCACCCAGGAGGCGCTGATGGA...GGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCTCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp CTGATTCATCCCTCCGGGTCATCCACGCACCCTCCTCCAGCACTCAGTGCTGTGTGGGGTTGGAACACCTaGGAAACATGTGGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LIHPSGSSTHPPPALSAVWGWNT*ETCGQV
Trigger: CACCTGACCACATGTTTCCCAGGTGTTCCAACCCCA...CACAGCACTGAGTGCTGGAGGAGGGTGCGTGGATGACCCGGAGGGATGAATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp CTGATTCATCCCTCCGGGTCATCCACGCACCCTCCTCCAGCACTCAGTGCTGTGTATGGTTCCTGGTTGTaGCGAGGTGCACTGAGACCT +
Preference number: 4 (lower is better)
Translates to: LIHPSGSSTHPPPALSAVYGSWL*RGALRP
Trigger: AGGTCTCAGTGCACCTCGCCACAACCAGGAACCATA...CACAGCACTGAGTGCTGGAGGAGGGTGCGTGGATGACCCGGAGGGATGAATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GCGGGAGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCAGGCAGAGGGCGTTATaGTTCCTGGTTGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: AGAEVCTSPLLLFGCYRARQRAL*FLVVAR
Trigger: CCTCGCCACAACCAGGAACCATAACGCCCTCTGCCT...GGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCTCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp CAGTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGTCAGTGGGCGGCACCTaGCAGAGCGGAGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: QCVDFPMCAQIQLVTREQSVGGT*QSGGGQ
Trigger: CTGCCCTCCTCCGCTCTGCCAGGTGCCGCCCACTGA...CTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACACACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp CCCCCTCCTGCCAAGCCTTTTGATACTGAGCATGGCGTCATAAACCAGAGTGTGGTTGGGATGGAGGCATaGCTTGGGCCGCGGATGTCC +
Preference number: 4 (lower is better)
Translates to: PPPAKPFDTEHGVINQSVVGMEA*LGPRMS
Trigger: GGACATCCGCGGCCCAAGCCATGCCTCCATCCCAAC...CACACTCTGGTTTATGACGCCATGCTCAGTATCAAAAGGCTTGGCAGGAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACTGCCGGGCTGAGTGGGTaGCTCTCTGGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GRLGATQLCGISEWKLATAGLSG*LSGCCC
Trigger: GCAGCAGCAACCAGAGAGCCACCCACTCAGCCCGGC...AGTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR CAA 72 bp TCCGGAGTCCCGAGTGAAGAAGCGCCCAGGGGACCTTaGGAGTTATCCATAGACCTGGATCTCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SGVPSEEAPRGP*ELSIDLDLSLA
Trigger: GGCCAAGGAGAGATCCAGGTCTATGGATAACTCCAAAGGTCCCCTGGGCGCTTCTTCACTCGGGACTCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
CDS-3UTR TCA 90 bp GAAGCCAGGCTCTCCCGAGTGCAGTCCAGATTAGTGATCTCTACAGCTGCAGAATCAGCGCCTCCTGGGTaGCAGGCTTTCTCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: EARLSRVQSRLVISTAAESAPPG*QAFSQS
Trigger: ACTCTGCGAGAAAGCCTGTCACCCAGGAGGCGCTGA...TTCTGCAGCTGTAGAGATCACTAATCTGGACTGCACTCGGGAGAGCCTGGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp GGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACTGGTAGTCCTTCTCGCTaGGGGACCTCATGCGGTCCG +
Preference number: 4 (lower is better)
Translates to: GRLGATQLCGISEWKLATGSPSR*GTSCGP
Trigger: CGGACCGCATGAGGTCCCGCAGCGAGAAGGACTACC...AGTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211737.2
CDS-3UTR GCA 90 bp GTGTTGGAAGCCAGGCTCTCCCGAGTGCAGTCCAGATTAGTGATCTCTACAGCTGGGTGGAGGCATGCATaGTGTGCACGTCTTCTCGGC +
Preference number: 4 (lower is better)
Translates to: VLEARLSRVQSRLVISTAGWRHA*CARLLG
Trigger: GCCGAGAAGACGTGCACAGCATGCATGCCTCCACCC...AGCTGTAGAGATCACTAATCTGGACTGCACTCGGGAGAGCCTGGCTTCCAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp GTTGAAGGTTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTCTGACGCCGGGGATATCCAGATaGGAGCCATCCGAAGGATCT +
Preference number: 4 (lower is better)
Translates to: VEGWTSSAMGWTQSRILTPGISR*EPSEGS
Trigger: AGATCCTTCGGATGGCTCGCATCTGGATATCCCCGG...CGTCAGAATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp GCGGGAGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCTGGCTGTGGCTTCGGTaGACTTTGGAGTGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: AGAEVCTSPLLLFGCYRAWLWLR*TLEWEL
Trigger: AAGCTCCCACTCCAAAGTGCACCGAAGCCACAGCCA...GGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCTCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp TTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTCTGACGGCGGTTGCGGGTGGCTCTCTGGTTaGTGCTGCTATCAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: LDQLRHGLDSKQDSDGGCGWLSG*CCYQFL
Trigger: AAGAAACTGATAGCAGCAGCAACCAGAGAGCCACCC...GCAACCGCCGTCAGAATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp CGTGGCCCCATTCCCTATAGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCTATGGTTCCTGGTTGTaGCGAGGTGCACTGAGACCT +
Preference number: 4 (lower is better)
Translates to: RGPIPYRPAGSNTTLWHFYGSWL*RGALRP
Trigger: AGGTCTCAGTGCACCTCGCCACAACCAGGAACCATA...GAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCTATAGGGAATGGGGCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GACGCGGGAGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGGGCGTTATGGTTCCTaGTTGTGGCGAGGTGCACTG +
Preference number: 4 (lower is better)
Translates to: DAGAEVCTSPLLLFGCYRGRYGS*LWRGAL
Trigger: CAGTGCACCTCGCCACAACCAGGAACCATAACGCCC...TCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCTCCCGCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GCGGGAGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCTCCTCGGGAGGAAACTaGGCAGAGAAATTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: AGAEVCTSPLLLFGCYRASSGGN*AEKLAS
Trigger: GCTGGCCAATTTCTCTGCCCAGTTTCCTCCCGAGGA...GGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCTCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCCCCCACTTCCCGAGGGATaGTCGTGGGCGTGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: YVCSDTVSDAGAEVCTSPPLPEG*SWACPR
Trigger: ACGAGGACACGCCCACGACCATCCCTCGGGAAGTGG...GGGAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TGTGTTGGAAGCCAGGCTCTCCCGAGTGCAGTCCAGATTAGTGATCTCTACAGCAGTGGGAGCTTCCCCTaGAGGGTTCGGGAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: CVGSQALPSAVQISDLYSSGSFP*RVRERA
Trigger: TGCCCTTTCCCGAACCCTCCAGGGGAAGCTCCCACT...GCTGTAGAGATCACTAATCTGGACTGCACTCGGGAGAGCCTGGCTTCCAACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GTGTTGGAAGCCAGGCTCTCCCGAGTGCAGTCCAGATTAGTGATCTCTACAGCTCTGGATCTCCGGTCCTaGGTATGGCTGTGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: VLEARLSRVQSRLVISTALDLRS*VWLWLR
Trigger: CCGAAGCCACAGCCATACCCAGGACCGGAGATCCAG...AGCTGTAGAGATCACTAATCTGGACTGCACTCGGGAGAGCCTGGCTTCCAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACTTCCAGCCGGGCTGAGTaGGTGGCTCTCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: GRLGATQLCGISEWKLATSSRAE*VALWLL
Trigger: CAGCAACCAGAGAGCCACCCACTCAGCCCGGCTGGA...AGTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR CAA 72 bp TGGAACACAAAGCTGTGGTTCCAGTGGAGAATAATCTaGGCAAAGCCCAGAGAGGGCCTCAGCCCGAGGCCG +
Preference number: 4 (lower is better)
Translates to: WNTKLWFQWRII*AKPREGLSPRP
Trigger: CGGCCTCGGGCTGAGGCCCTCTCTGGGCTTTGCCAAGATTATTCTCCACTGGAACCACAGCTTTGTGTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp GTTGAAGGTTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTCTGACGTCTGTGGGGTCACAATaGAATAGCCATCCGGAGTCG +
Preference number: 4 (lower is better)
Translates to: VEGWTSSAMGWTQSRILTSVGSQ*NSHPES
Trigger: CGACTCCGGATGGCTATTTCATTGTGACCCCACAGA...CGTCAGAATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp TATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCCCTTCCCTGACGCAGCCTaGGGCAGAGGGCGTTATGGT +
Preference number: 4 (lower is better)
Translates to: YVCSDTVSDAGAEVCTSPFPDAA*GRGRYG
Trigger: ACCATAACGCCCTCTGCCTCAGGCTGCGTCAGGGAA...GGGAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp GCGGAAGTTGAAGGTTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTGGGCAGTGTGCCTCATaGCATTTTCCACCGTCAAGT +
Preference number: 4 (lower is better)
Translates to: AEVEGWTSSAMGWTQSRIGQCAS*HFPPSS
Trigger: ACTTGACGGTGGAAAATGTCATGAGGCACACTGCCC...AATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAACTTCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp GAAGCCAGGCTCTCCCGAGTGCAGTCCAGATTAGTGATCTCTACAGCTGCAGAACCGTGGGACTTGCGGTaGGTCCGGCTCTTTTTACTC +
Preference number: 4 (lower is better)
Translates to: EARLSRVQSRLVISTAAEPWDLR*VRLFLL
Trigger: GAGTAAAAAGAGCCGGACTCACCGCAAGTCCCACGG...TTCTGCAGCTGTAGAGATCACTAATCTGGACTGCACTCGGGAGAGCCTGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp CAGGATTCTGACGGCGGTTGCTTTCAACAATGCTTGATGTGTTGGAAGCCAGGCTCGCGTCTTGCTGTGTaGCCGAGACTTCCCGTGGGA +
Preference number: 4 (lower is better)
Translates to: QDSDGGCFQQCLMCWKPGSRLAV*PRLPVG
Trigger: TCCCACGGGAAGTCTCGGTCACACAGCAAGACGCGA...GCCTGGCTTCCAACACATCAAGCATTGTTGAAAGCAACCGCCGTCAGAATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp ACTGGTATTTTAAAGGACTCACACACAAAGGGCTGGGGTCCCTTCTGCCCAGTTCCTCCAGGCTCCTGCTaGCGTTGGGATGGAGGCATG +
Preference number: 4 (lower is better)
Translates to: TGILKDSHTKGWGPFCPVPPGSC*RWDGGM
Trigger: CATGCCTCCATCCCAACGTCAGCAGGAGCCTGGAGG...AACTGGGCAGAAGGGACCCCAGCCCTTTGTGTGTGAGTCCTTTAAAATACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp TATAGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCCCTCCAGGCTCCTGCTaGCGTTGGGATGGAGGCATG +
Preference number: 4 (lower is better)
Translates to: YRPAGSNTTLWHFRMEIGPPGSC*RWDGGM
Trigger: CATGCCTCCATCCCAACGTCAGCAGGAGCCTGGAGG...GCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp GACGCGGGAGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGGCAGTAAGGGTCTTTaGAGTCCTTGGCGGACTTCC +
Preference number: 4 (lower is better)
Translates to: DAGAEVCTSPLLLFGCYRGSKGL*SPWRTS
Trigger: GGAAGTCCGCCAAGGACTGCAAAGACCCTTACTGCC...TCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCTCCCGCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp CTGATTCATCCCTCCGGGTCATCCACGCACCCTCCTCCAGCACTCAGTGCTGTGTTCATCAGGGCAGTGTaGCTCATGACATTTTCCACC +
Preference number: 4 (lower is better)
Translates to: LIHPSGSSTHPPPALSAVFIRAV*LMTFST
Trigger: GGTGGAAAATGTCATGAGGCACACTGCCCTGATGAA...CACAGCACTGAGTGCTGGAGGAGGGTGCGTGGATGACCCGGAGGGATGAATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp GAAGTTGAAGGTTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTCTGTGGACACTCGCGTCTTaGTGTGTGACCGAGACTTCC +
Preference number: 4 (lower is better)
Translates to: EVEGWTSSAMGWTQSRILWTLAS*CVTETS
Trigger: GGAAGTCTCGGTCACACAGCAAGACGCGAGTGTCCA...CAGAATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp TGGGGTTATCACAGAAATGACAGGAACCCAACGAGAAACTGTAAACAAAGGTGGCACACCACCAGAGGCTaGAGGGCCCCCTCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: WGYHRNDRNPTRNCKQRWHTTRG*RAPSWP
Trigger: GGGCCAGGAGGGGGCCCTGCAGCCTCTGGTGGTGTG...CCACCTTTGTTTACAGTTTCTCGTTGGGTTCCTGTCATTTCTGTGATAACCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp CGTGGCCCCATTCCCTATAGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCGGAGCCACTGCATGGTaGCCACATCATCTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: RGPIPYRPAGSNTTLWHFGATAW*PHHLCF
Trigger: AAAACAGAGATGATGTGGGCACCATGCAGTGGCTCC...GAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCTATAGGGAATGGGGCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp GACGCGGGAGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGACTCTCCAGGAGCCACTaGATGGTGCCCACATCATCT +
Preference number: 4 (lower is better)
Translates to: DAGAEVCTSPLLLFGCYRLSRSH*MVPTSS
Trigger: AGATGATGTGGGCACCATGCAGTGGCTCCTGGAGAG...TCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCTCCCGCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp ATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCCCCTGCTGCTGCTATCCATaGTGTCCAGCCGGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: MCAQIQLVTREQKCAHLPCCCYP*CPAGLS
Trigger: ACTCAGCCCGGCTGGACAGCATGGATAGCAGCAGCA...GGGGAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp ATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCCCCTCCATCAGCGCCTCCTaGGTGACAGGCTTTCTCGCA +
Preference number: 4 (lower is better)
Translates to: MCAQIQLVTREQKCAHLPSISAS*VTGFLA
Trigger: TGCGAGAAAGCCTGTCACCCAGGAGGCGCTGATGGA...GGGGAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GAAGCCAGGCTCTCCCGAGTGCAGTCCAGATTAGTGATCTCTACAGCTGCAGAATCCATCAGCGCCTCCTaGGTGACAGGCTTTCTCGCA +
Preference number: 4 (lower is better)
Translates to: EARLSRVQSRLVISTAAESISAS*VTGFLA
Trigger: TGCGAGAAAGCCTGTCACCCAGGAGGCGCTGATGGA...TTCTGCAGCTGTAGAGATCACTAATCTGGACTGCACTCGGGAGAGCCTGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp CTCAGCTTCGCTGGTCGGGGGATCCGTACTGGCGCGGAAGTTGAAGGTTGGACCACCCTCTCGTCCAAGTaGTACCACTTACTGTTAGTT +
Preference number: 4 (lower is better)
Translates to: LSFAGRGIRTGAEVEGWTTLSSK*YHLLLV
Trigger: AACTAACAGTAAGTGGTACCACTTGGACGAGAGGGT...GGTCCAACCTTCAACTTCCGCGCCAGTACGGATCCCCCGACCAGCGAAGCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp ATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCCCCAGGCAGAGGGCGTTATaGTTCCTGGTTGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: MCAQIQLVTREQKCAHLPRQRAL*FLVVAR
Trigger: CCTCGCCACAACCAGGAACCATAACGCCCTCTGCCT...GGGGAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp CCCCCTCCTGCCAAGCCTTTTGATACTGAGCATGGCGTCATAAACCAGAGTGTGGGTCTTTGCAGTCCTTaGCGGACTTCCTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PPPAKPFDTEHGVINQSVGLCSP*RTSSAG
Trigger: CCCTGCAGAGGAAGTCCGCCAAGGACTGCAAAGACC...CACACTCTGGTTTATGACGCCATGCTCAGTATCAAAAGGCTTGGCAGGAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GGCAGGTGCACAAGGACCAGCCTGGCTCTAACCTTCCATTTCTGCCTTTCCAGATCCTCGGGAGGAAACTaGGCAGAGAAATTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GRCTRTSLALTFHFCLSRSSGGN*AEKLAS
Trigger: GCTGGCCAATTTCTCTGCCCAGTTTCCTCCCGAGGA...TCTGGAAAGGCAGAAATGGAAGGTTAGAGCCAGGCTGGTCCTTGTGCACCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCCCCGAGGGATGGTCGTaGGCGTGTCCTCGTCTCGCA +
Preference number: 4 (lower is better)
Translates to: AIFREGTNPPVQISDLYSPEGWS*ACPRLA
Trigger: TGCGAGACGAGGACACGCCCACGACCATCCCTCGGG...GCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp TATAGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCCCACTTCCCGAGGGATaGTCGTGGGCGTGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: YRPAGSNTTLWHFRMEIGPLPEG*SWACPR
Trigger: ACGAGGACACGCCCACGACCATCCCTCGGGAAGTGG...GCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp AACACAAAGCTGTGGTTCCAGTGGAGAATAATCTTGGCAAAGCCCAGAGAGGGCCTCCTTCCACTGTGGTaGGCGGAGGACCCGGCTTTG +
Preference number: 4 (lower is better)
Translates to: NTKLWFQWRIILAKPREGLLPLW*AEDPAL
Trigger: CAAAGCCGGGTCCTCCGCCCACCACAGTGGAAGGAG...GCCCTCTCTGGGCTTTGCCAAGATTATTCTCCACTGGAACCACAGCTTTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GTTGAAGGTTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTCTGACGCCGAAGGATCTCCTTTaGACACTCGCGTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: VEGWTSSAMGWTQSRILTPKDLL*TLASCC
Trigger: ACAGCAAGACGCGAGTGTCCAAAGGAGATCCTTCGG...CGTCAGAATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GACGCGGGAGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGGCGTCATGGGGAAATaGGACTCGATCACGTTCGTG +
Preference number: 4 (lower is better)
Translates to: DAGAEVCTSPLLLFGCYRGVMGK*DSITFV
Trigger: CACGAACGTGATCGAGTCCCATTTCCCCATGACGCC...TCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCTCCCGCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp CTGGTCGGGGGATCCGTACTGGCGCGGAAGTTGAAGGTTGGACCAGCTCCGCCAAAGGTCAAAGTGTCATaGTCCTCCTTATTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LVGGSVLARKLKVGPAPPKVKVS*SSLFFP
Trigger: AGGGAAGAATAAGGAGGACCATGACACTTTGACCTT...TGGCGGAGCTGGTCCAACCTTCAACTTCCGCGCCAGTACGGATCCCCCGACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp AGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCATACAGTTGGGATGGAGGCATaGCTTGGGCCGCGGATGTCC +
Preference number: 4 (lower is better)
Translates to: SRSVHISPTAIRLLQSHTVGMEA*LGPRMS
Trigger: GGACATCCGCGGCCCAAGCCATGCCTCCATCCCAAC...TGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GACGCGGGAGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGATCAAAAGAAGCCTCCTaGTTCCCTCCAGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: DAGAEVCTSPLLLFGCYRSKEAS*FPPGSC
Trigger: GCAGGAGCCTGGAGGGAACCAGGAGGCTTCTTTTGA...TCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCTCCCGCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GAAGTTGAAGGTTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTCTGTCAAAAGAAGCCTCCTaGTTCCCTCCAGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: EVEGWTSSAMGWTQSRILSKEAS*FPPGSC
Trigger: GCAGGAGCCTGGAGGGAACCAGGAGGCTTCTTTTGA...CAGAATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp CGACACAGGCATATGGATCATAGAAGCCGTCACCACGGAGCCCCTCTGCATTGCGAGTGGGTGGCTCTCTaGTTGCTGCTGCTATCAGTT +
Preference number: 4 (lower is better)
Translates to: RHRHMDHRSRHHGAPLHCEWVAL*LLLLSV
Trigger: AACTGATAGCAGCAGCAACCAGAGAGCCACCCACTC...GCAATGCAGAGGGGCTCCGTGGTGACGGCTTCTATGATCCATATGCCTGTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCGCCGGGCTGAGTGGGTaGCTCTCTGGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AIFREGTNPPVQISDLYSAGLSG*LSGCCC
Trigger: GCAGCAGCAACCAGAGAGCCACCCACTCAGCCCGGC...GCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp AGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCATACATCCAGCCGGGCTGAGTaGGTGGCTCTCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SRSVHISPTAIRLLQSHTSSRAE*VALWLL
Trigger: CAGCAACCAGAGAGCCACCCACTCAGCCCGGCTGGA...TGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp CCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCGCGGAAGTTGAAGGTTaGACCAGCTCCGCCATGGGC +
Preference number: 4 (lower is better)
Translates to: PMCAQIQLVTREQKCAHLAEVEG*TSSAMG
Trigger: GCCCATGGCGGAGCTGGTCCAACCTTCAACTTCCGC...GAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079195.6
3UTR CAA 72 bp GCCACTGTGTTTCTGGGGGATCTTGAGTCACTCCGTTaGTCTGCTCCTGTCAAGCATGCGTGTGACCCACAG +
Preference number: 4 (lower is better)
Translates to: ATVFLGDLESLR*SAPVKHACDPQ
Trigger: CTGTGGGTCACACGCATGCTTGACAGGAGCAGACAAACGGAGTGACTCAAGATCCCCCAGAAACACAGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CAA 72 bp GGGATATCCAGATGCGAGCCATCCGAAGGATCTCCTTaGGACACTCGCGTCTTGCTGTGTGACCGAGACTTC +
Preference number: 4 (lower is better)
Translates to: GISRCEPSEGSP*DTRVLLCDRDF
Trigger: GAAGTCTCGGTCACACAGCAAGACGCGAGTGTCCAAAGGAGATCCTTCGGATGGCTCGCATCTGGATATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
CDS-3UTR TCA 90 bp CTCACTCGAGGTGTTGCACTGAAAATAGTCATCCACAGCTGTTTTAGCCGGGCATCAGCGCCTCCTGGGTaGCAGGCTTTCTCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: LTRGVALKIVIHSCFSRASAPPG*QAFSQS
Trigger: ACTCTGCGAGAAAGCCTGTCACCCAGGAGGCGCTGA...TGCCCGGCTAAAACAGCTGTGGATGACTATTTTCAGTGCAACACCTCGAGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
CDS-3UTR TCA 90 bp GGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACTGTAATGTCCTTTCCCTaGCGCAGCCTGAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GRLGATQLCGISEWKLATVMSFP*RSLRQR
Trigger: CCTCTGCCTCAGGCTGCGTCAGGGAAAGGACATTAC...AGTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp GGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACTCCGTGGGACTTGCGGTaGGTCCGGCTCTTTTTACTC +
Preference number: 4 (lower is better)
Translates to: GRLGATQLCGISEWKLATPWDLR*VRLFLL
Trigger: GAGTAAAAAGAGCCGGACTCACCGCAAGTCCCACGG...AGTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp TGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGCCTCCAGGCTCCTGCTaGCGTTGGGATGGAGGCATG +
Preference number: 4 (lower is better)
Translates to: CRLSYVCSDTVSDAGAEVPPGSC*RWDGGM
Trigger: CATGCCTCCATCCCAACGTCAGCAGGAGCCTGGAGG...CACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp ATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCCCCATCCACTGTCCACCGTaGTGCTGCTGCTATCCATGC +
Preference number: 4 (lower is better)
Translates to: MCAQIQLVTREQKCAHLPIHCPP*CCCYPC
Trigger: GCATGGATAGCAGCAGCATCACGGTGGACAGTGGAT...GGGGAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp GTTATCACAGAAATGACAGGAACCCAACGAGAAACTGTAAACAAAGGTGGATGTCGCTGCGGGACCTCATaGGGTCCGAGGCCCGGTCCG +
Preference number: 4 (lower is better)
Translates to: VITEMTGTQRETVNKGGCRCGTS*GPRPGP
Trigger: CGGACCGGGCCTCGGACCGCATGAGGTCCCGCAGCG...ACATCCACCTTTGTTTACAGTTTCTCGTTGGGTTCCTGTCATTTCTGTGATAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079195.6
CDS-3UTR GCA 90 bp GAAGCCAGGCTCTCCCGAGTGCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAGGCAGTAAGGGTCTTTaGAGTCCTTGGCGGACTTCC +
Preference number: 4 (lower is better)
Translates to: EARLSRVQSRLVISTAAEGSKGL*SPWRTS
Trigger: GGAAGTCCGCCAAGGACTGCAAAGACCCTTACTGCC...TTCTGCAGCTGTAGAGATCACTAATCTGGACTGCACTCGGGAGAGCCTGGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp ATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCCCCCGGAGGACCCGGCTTTaGTCCGGTGAGCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: MCAQIQLVTREQKCAHLPRRTRL*SGELFL
Trigger: AAGAAAAAGCTCACCGGAGCAAAGCCGGGTCCTCCG...GGGGAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp CCCCCTCCTGCCAAGCCTTTTGATACTGAGCATGGCGTCATAAACCAGAGTGTGTGGCTGTGGCTTCGGTaGACTTTGGAGTGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: PPPAKPFDTEHGVINQSVWLWLR*TLEWEL
Trigger: AAGCTCCCACTCCAAAGTGCACCGAAGCCACAGCCA...CACACTCTGGTTTATGACGCCATGCTCAGTATCAAAAGGCTTGGCAGGAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp GCAAGCAGTTGGAAGGTTTCTGTAATTTCTCAGCTTCGCTGGTCGGGGGATCCGCTCTCCAGGAGCCACTaGATGGTGCCCACATCATCT +
Preference number: 4 (lower is better)
Translates to: ASSWKVSVISQLRWSGDPLSRSH*MVPTSS
Trigger: AGATGATGTGGGCACCATGCAGTGGCTCCTGGAGAG...CGGATCCCCCGACCAGCGAAGCTGAGAAATTACAGAAACCTTCCAACTGCTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp GGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACTTGCTGCTGCTATCCATaGTGTCCAGCCGGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: GRLGATQLCGISEWKLATCCCYP*CPAGLS
Trigger: ACTCAGCCCGGCTGGACAGCATGGATAGCAGCAGCA...AGTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp AGTTGGAAGGTTTCTGTAATTTCTCAGCTTCGCTGGTCGGGGGATCCGTACTGGTGCTGCTGCTATCCATaGTGTCCAGCCGGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: SWKVSVISQLRWSGDPYWCCCYP*CPAGLS
Trigger: ACTCAGCCCGGCTGGACAGCATGGATAGCAGCAGCA...CCAGTACGGATCCCCCGACCAGCGAAGCTGAGAAATTACAGAAACCTTCCAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp AGGCAGGTGCACAAGGACCAGCCTGGCTCTAACCTTCCATTTCTGCCTTTCCAGTGGGGTTGGAACACCTaGGAAACATGTGGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: RQVHKDQPGSNLPFLPFQWGWNT*ETCGQV
Trigger: CACCTGACCACATGTTTCCCAGGTGTTCCAACCCCA...CTGGAAAGGCAGAAATGGAAGGTTAGAGCCAGGCTGGTCCTTGTGCACCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCCCGGGCGTTATGGTTCCTaGTTGTGGCGAGGTGCACTG +
Preference number: 4 (lower is better)
Translates to: YVCSDTVSDAGAEVCTSPGRYGS*LWRGAL
Trigger: CAGTGCACCTCGCCACAACCAGGAACCATAACGCCC...GGGAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TGTGTTGGAAGCCAGGCTCTCCCGAGTGCAGTCCAGATTAGTGATCTCTACAGCACTTCCTCTGCAGGGTaGAGGCATGCATGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: CVGSQALPSAVQISDLYSTSSAG*RHACCA
Trigger: TGCACAGCATGCATGCCTCCACCCTGCAGAGGAAGT...GCTGTAGAGATCACTAATCTGGACTGCACTCGGGAGAGCCTGGCTTCCAACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp ATGCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACATCAGTGGGCGGCACCTaGCAGAGCGGAGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: MQSLGKEPTHQSRLVISTSVGGT*QSGGGQ
Trigger: CTGCCCTCCTCCGCTCTGCCAGGTGCCGCCCACTGA...TGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp TTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAACCACTTCCCGAGGGATaGTCGTGGGCGTGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: LGKEPTHQSRLVISTAAEPLPEG*SWACPR
Trigger: ACGAGGACACGCCCACGACCATCCCTCGGGAAGTGG...TTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp TGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGCCACTTCCCGAGGGATaGTCGTGGGCGTGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: CRLSYVCSDTVSDAGAEVPLPEG*SWACPR
Trigger: ACGAGGACACGCCCACGACCATCCCTCGGGAAGTGG...CACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCCTCCTTCCACTGTGGTaGGCGGAGGACCCGGCTTTG +
Preference number: 4 (lower is better)
Translates to: AIFREGTNPPVQISDLYSLLPLW*AEDPAL
Trigger: CAAAGCCGGGTCCTCCGCCCACCACAGTGGAAGGAG...GCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp GTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCATACATGTGAAAAGCTCCTTCCACTGTGGTaGGCGGAGGACCCGGCTTTG +
Preference number: 4 (lower is better)
Translates to: VHISPTAIRLLQSHTCEKLLPLW*AEDPAL
Trigger: CAAAGCCGGGTCCTCCGCCCACCACAGTGGAAGGAG...CTTTTCACATGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GAAGCCAGGCTCTCCCGAGTGCAGTCCAGATTAGTGATCTCTACAGCTGCAGAATCCTGGGTATGGCTGTaGCTTCGGTGCACTTTGGAG +
Preference number: 4 (lower is better)
Translates to: EARLSRVQSRLVISTAAESWVWL*LRCTLE
Trigger: CTCCAAAGTGCACCGAAGCCACAGCCATACCCAGGA...TTCTGCAGCTGTAGAGATCACTAATCTGGACTGCACTCGGGAGAGCCTGGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TGTGTTGGAAGCCAGGCTCTCCCGAGTGCAGTCCAGATTAGTGATCTCTACAGCTCCTGGGTATGGCTGTaGCTTCGGTGCACTTTGGAG +
Preference number: 4 (lower is better)
Translates to: CVGSQALPSAVQISDLYSSWVWL*LRCTLE
Trigger: CTCCAAAGTGCACCGAAGCCACAGCCATACCCAGGA...GCTGTAGAGATCACTAATCTGGACTGCACTCGGGAGAGCCTGGCTTCCAACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GGCTCTAACCTTCCATTTCTGCCTTTCCAGAGCCATTGGTACCTCACTCGGAAACTGGATCTCCGGTCCTaGGTATGGCTGTGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: GSNLPFLPFQSHWYLTRKLDLRS*VWLWLR
Trigger: CCGAAGCCACAGCCATACCCAGGACCGGAGATCCAG...TTTCCGAGTGAGGTACCAATGGCTCTGGAAAGGCAGAAATGGAAGGTTAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GTTGAAGGTTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTCTGACGTCTCCTTGGCCTTGTTaGACCTCTCATTCCTGGATC +
Preference number: 4 (lower is better)
Translates to: VEGWTSSAMGWTQSRILTSPWPC*TSHSWI
Trigger: GATCCAGGAATGAGAGGTCCAACAAGGCCAAGGAGA...CGTCAGAATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TGTGTTGGAAGCCAGGCTCTCCCGAGTGCAGTCCAGATTAGTGATCTCTACAGCGGTGTTTGGTCATCTTaGCTGCAGCCTTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: CVGSQALPSAVQISDLYSGVWSS*LQPSAR
Trigger: CCTGGCTGAAGGCTGCAGCCAAGATGACCAAACACC...GCTGTAGAGATCACTAATCTGGACTGCACTCGGGAGAGCCTGGCTTCCAACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TTGGTCTCAGATCAGACTCTGATGCAATCTTTAGGGAAGGAACCAACCCACCAGGTTGGGATGGAGGCATaGCTTGGGCCGCGGATGTCC +
Preference number: 4 (lower is better)
Translates to: LVSDQTLMQSLGKEPTHQVGMEA*LGPRMS
Trigger: GGACATCCGCGGCCCAAGCCATGCCTCCATCCCAAC...CTGGTGGGTTGGTTCCTTCCCTAAAGATTGCATCAGAGTCTGATCTGAGACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp TGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGCTGCTGACGTTGGGATaGAGGCATGGCTTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: CRLSYVCSDTVSDAGAEVLLTLG*RHGLGR
Trigger: GCGGCCCAAGCCATGCCTCCATCCCAACGTCAGCAG...CACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp ATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCCCCTCAAAAGAAGCCTCCTaGTTCCCTCCAGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: MCAQIQLVTREQKCAHLPSKEAS*FPPGSC
Trigger: GCAGGAGCCTGGAGGGAACCAGGAGGCTTCTTTTGA...GGGGAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GTGTTGGAAGCCAGGCTCTCCCGAGTGCAGTCCAGATTAGTGATCTCTACAGCTCCAGGAGCCACTGCATaGTGCCCACATCATCTCTGT +
Preference number: 4 (lower is better)
Translates to: VLEARLSRVQSRLVISTAPGATA*CPHHLC
Trigger: ACAGAGATGATGTGGGCACCATGCAGTGGCTCCTGG...AGCTGTAGAGATCACTAATCTGGACTGCACTCGGGAGAGCCTGGCTTCCAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp CTTTGCAGAGATGTAAACATCAGGCCCAATCGTCGTAAACGTTGCTGTATCGGAGCCGGGCTGAGTGGGTaGCTCTCTGGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LCRDVNIRPNRRKRCCIGAGLSG*LSGCCC
Trigger: GCAGCAGCAACCAGAGAGCCACCCACTCAGCCCGGC...TCCGATACAGCAACGTTTACGACGATTGGGCCTGATGTTTACATCTCTGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp TTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAATTCCCTGACGCAGCCTaGGGCAGAGGGCGTTATGGT +
Preference number: 4 (lower is better)
Translates to: LGKEPTHQSRLVISTAAEFPDAA*GRGRYG
Trigger: ACCATAACGCCCTCTGCCTCAGGCTGCGTCAGGGAA...TTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR TCA 90 bp CAGTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGGTAATGTCCTTTCCCTaGCGCAGCCTGAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: QCVDFPMCAQIQLVTREQVMSFP*RSLRQR
Trigger: CCTCTGCCTCAGGCTGCGTCAGGGAAAGGACATTAC...CTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACACACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp ATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCCCCGGGCAGTGTGCCTCATaGCATTTTCCACCGTCAAGT +
Preference number: 4 (lower is better)
Translates to: MCAQIQLVTREQKCAHLPGQCAS*HFPPSS
Trigger: ACTTGACGGTGGAAAATGTCATGAGGCACACTGCCC...GGGGAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp TTGGTCTCAGATCAGACTCTGATGCAATCTTTAGGGAAGGAACCAACCCACCAGTCGCGTCTTGCTGTGTaGCCGAGACTTCCCGTGGGA +
Preference number: 4 (lower is better)
Translates to: LVSDQTLMQSLGKEPTHQSRLAV*PRLPVG
Trigger: TCCCACGGGAAGTCTCGGTCACACAGCAAGACGCGA...CTGGTGGGTTGGTTCCTTCCCTAAAGATTGCATCAGAGTCTGATCTGAGACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR TCA 90 bp ATTTTGAGCTGCCCAGTTGAGCTGCGGAACTTTACCAGTCACTGGTTGTTAGCATCGCGTCTTGCTGTGTaGCCGAGACTTCCCGTGGGA +
Preference number: 4 (lower is better)
Translates to: ILSCPVELRNFTSHWLLASRLAV*PRLPVG
Trigger: TCCCACGGGAAGTCTCGGTCACACAGCAAGACGCGA...TGCTAACAACCAGTGACTGGTAAAGTTCCGCAGCTCAACTGGGCAGCTCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp GTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCATACATGTGAAAAGTCCTGGCCCTTTCGGTaGCTCCTCCTTGTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: VHISPTAIRLLQSHTCEKSWPFR*LLLVPN
Trigger: GTTGGGCACAAGGAGGAGTCACCGAAAGGGCCAGGA...CTTTTCACATGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp GGCCCAATCGTCGTAAACGTTGCTGTATCGGATGAGACAGAAGATCTGAGGCAGACGGGTGACTTTGGGTaGGACTTGAGGAGGGACAAG +
Preference number: 4 (lower is better)
Translates to: GPIVVNVAVSDETEDLRQTGDFG*DLRRDK
Trigger: CTTGTCCCTCCTCAAGTCTCACCCAAAGTCACCCGT...CTGCCTCAGATCTTCTGTCTCATCCGATACAGCAACGTTTACGACGATTGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp CAGGATTCTGACGGCGGTTGCTTTCAACAATGCTTGATGTGTTGGAAGCCAGGCACGGGTGACTTTGGGTaGGACTTGAGGAGGGACAAG +
Preference number: 4 (lower is better)
Translates to: QDSDGGCFQQCLMCWKPGTGDFG*DLRRDK
Trigger: CTTGTCCCTCCTCAAGTCTCACCCAAAGTCACCCGT...GCCTGGCTTCCAACACATCAAGCATTGTTGAAAGCAACCGCCGTCAGAATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp CCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCATCCACTGTCCACCGTaGTGCTGCTGCTATCCATGC +
Preference number: 4 (lower is better)
Translates to: PMCAQIQLVTREQKCAHLIHCPP*CCCYPC
Trigger: GCATGGATAGCAGCAGCATCACGGTGGACAGTGGAT...GAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp AGTTGGAAGGTTTCTGTAATTTCTCAGCTTCGCTGGTCGGGGGATCCGTACTGGATCCACTGTCCACCGTaGTGCTGCTGCTATCCATGC +
Preference number: 4 (lower is better)
Translates to: SWKVSVISQLRWSGDPYWIHCPP*CCCYPC
Trigger: GCATGGATAGCAGCAGCATCACGGTGGACAGTGGAT...CCAGTACGGATCCCCCGACCAGCGAAGCTGAGAAATTACAGAAACCTTCCAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp ATTTTGAGCTGCCCAGTTGAGCTGCGGAACTTTACCAGTCACTGGTTGTTAGCAGGGTGGAGGCATGCATaGTGTGCACGTCTTCTCGGC +
Preference number: 4 (lower is better)
Translates to: ILSCPVELRNFTSHWLLAGWRHA*CARLLG
Trigger: GCCGAGAAGACGTGCACAGCATGCATGCCTCCACCC...TGCTAACAACCAGTGACTGGTAAAGTTCCGCAGCTCAACTGGGCAGCTCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp GCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACTGTGCAGGGTGGAGGCATaGATGCTGTGCACGTCTTCT +
Preference number: 4 (lower is better)
Translates to: AGWEQHNSVAFQNGNWQLCRVEA*MLCTSS
Trigger: AGAAGACGTGCACAGCATGCATGCCTCCACCCTGCA...CAGTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp AGTTGGAAGGTTTCTGTAATTTCTCAGCTTCGCTGGTCGGGGGATCCGTACTGGCGGAGGACCCGGCTTTaGTCCGGTGAGCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SWKVSVISQLRWSGDPYWRRTRL*SGELFL
Trigger: AAGAAAAAGCTCACCGGAGCAAAGCCGGGTCCTCCG...CCAGTACGGATCCCCCGACCAGCGAAGCTGAGAAATTACAGAAACCTTCCAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp GCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACTGTGGACACTCGCGTCTTaGTGTGTGACCGAGACTTCC +
Preference number: 4 (lower is better)
Translates to: AGWEQHNSVAFQNGNWQLWTLAS*CVTETS
Trigger: GGAAGTCTCGGTCACACAGCAAGACGCGAGTGTCCA...CAGTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp GGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACTCCGGGGATATCCAGATaGGAGCCATCCGAAGGATCT +
Preference number: 4 (lower is better)
Translates to: GRLGATQLCGISEWKLATPGISR*EPSEGS
Trigger: AGATCCTTCGGATGGCTCGCATCTGGATATCCCCGG...AGTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp AGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACTGGCTGTGGCTTCGGTaGACTTTGGAGTGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: RPAGSNTTLWHFRMEIGNWLWLR*TLEWEL
Trigger: AAGCTCCCACTCCAAAGTGCACCGAAGCCACAGCCA...GTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp ACACATGTTCCACTTACAGTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTCACACCACCAGAGGCTaGAGGGCCCCCTCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: THVPLTVCRLSYVCSDTVHTTRG*RAPSWP
Trigger: GGGCCAGGAGGGGGCCCTGCAGCCTCTGGTGGTGTG...AACTGTATCTGAGCACACATAGGAAAGTCTACACACTGTAAGTGGAACATGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp TCAGCCCGAGGCCGTGAGAGTCAAGAGTCTCACCATCTTGATGAGACCATCTTACTCTCCAGGAGCCACTaGATGGTGCCCACATCATCT +
Preference number: 4 (lower is better)
Translates to: SARGRESQESHHLDETILLSRSH*MVPTSS
Trigger: AGATGATGTGGGCACCATGCAGTGGCTCCTGGAGAG...TAAGATGGTCTCATCAAGATGGTGAGACTCTTGACTCTCACGGCCTCGGGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp AGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCATACAGGGCGTTATGGTTCCTaGTTGTGGCGAGGTGCACTG +
Preference number: 4 (lower is better)
Translates to: SRSVHISPTAIRLLQSHTGRYGS*LWRGAL
Trigger: CAGTGCACCTCGCCACAACCAGGAACCATAACGCCC...TGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp AGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCATACAGGTCTTTGCAGTCCTTaGCGGACTTCCTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SRSVHISPTAIRLLQSHTGLCSP*RTSSAG
Trigger: CCCTGCAGAGGAAGTCCGCCAAGGACTGCAAAGACC...TGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GCGGAAGTTGAAGGTTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTACTGGGCAGAGAAATTaGCCAGCTGTTTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: AEVEGWTSSAMGWTQSRITGQRN*PAVWSC
Trigger: ACAAGACCAAACAGCTGGCCAATTTCTCTGCCCAGT...AATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAACTTCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp AGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACTCCTCGGGAGGAAACTaGGCAGAGAAATTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RPAGSNTTLWHFRMEIGNSSGGN*AEKLAS
Trigger: GCTGGCCAATTTCTCTGCCCAGTTTCCTCCCGAGGA...GTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTTACTCCTTCCACTGTaGTGGGCGGAGGACCCGGCT +
Preference number: 4 (lower is better)
Translates to: AIFREGTNPPVQISDLYSLLLPL*WAEDPA
Trigger: AGCCGGGTCCTCCGCCCACCACAGTGGAAGGAGTAA...GCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp GCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACTGGGCGTCATGGGGAAATaGGACTCGATCACGTTCGTG +
Preference number: 4 (lower is better)
Translates to: AGWEQHNSVAFQNGNWQLGVMGK*DSITFV
Trigger: CACGAACGTGATCGAGTCCCATTTCCCCATGACGCC...CAGTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp CCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCGGCGTCATGGGGAAATaGGACTCGATCACGTTCGTG +
Preference number: 4 (lower is better)
Translates to: PMCAQIQLVTREQKCAHLGVMGK*DSITFV
Trigger: CACGAACGTGATCGAGTCCCATTTCCCCATGACGCC...GAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGGCTTCGGTGCACTTTaGAGTGGGAGCTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: VCRLSYVCSDTVSDAGAEGFGAL*SGSFPW
Trigger: CCAGGGGAAGCTCCCACTCCAAAGTGCACCGAAGCC...TTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TTGGTCTCAGATCAGACTCTGATGCAATCTTTAGGGAAGGAACCAACCCACCAGGGCTTCGGTGCACTTTaGAGTGGGAGCTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: LVSDQTLMQSLGKEPTHQGFGAL*SGSFPW
Trigger: CCAGGGGAAGCTCCCACTCCAAAGTGCACCGAAGCC...CTGGTGGGTTGGTTCCTTCCCTAAAGATTGCATCAGAGTCTGATCTGAGACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp GCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACTGTCCTGGGTATGGCTGTaGCTTCGGTGCACTTTGGAG +
Preference number: 4 (lower is better)
Translates to: AGWEQHNSVAFQNGNWQLSWVWL*LRCTLE
Trigger: CTCCAAAGTGCACCGAAGCCACAGCCATACCCAGGA...CAGTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp ATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCCCCTGGACCTCTCATTCCTaGATCTCCGGTCCTGGGTAT +
Preference number: 4 (lower is better)
Translates to: MCAQIQLVTREQKCAHLPWTSHS*ISGPGY
Trigger: ATACCCAGGACCGGAGATCCAGGAATGAGAGGTCCA...GGGGAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GGCCCAATCGTCGTAAACGTTGCTGTATCGGATGAGACAGAAGATCTGAGGCAGGGTGTTTGGTCATCTTaGCTGCAGCCTTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GPIVVNVAVSDETEDLRQGVWSS*LQPSAR
Trigger: CCTGGCTGAAGGCTGCAGCCAAGATGACCAAACACC...CTGCCTCAGATCTTCTGTCTCATCCGATACAGCAACGTTTACGACGATTGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GAAGCCAGGCTCTCCCGAGTGCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAGATTGGCTCGGTGTTTaGTCATCTTGGCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: EARLSRVQSRLVISTAAEDWLGV*SSWLQP
Trigger: AGGCTGCAGCCAAGATGACCAAACACCGAGCCAATC...TTCTGCAGCTGTAGAGATCACTAATCTGGACTGCACTCGGGAGAGCCTGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GCAAGCAGTTGGAAGGTTTCTGTAATTTCTCAGCTTCGCTGGTCGGGGGATCCGGATTGGCTCGGTGTTTaGTCATCTTGGCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: ASSWKVSVISQLRWSGDPDWLGV*SSWLQP
Trigger: AGGCTGCAGCCAAGATGACCAAACACCGAGCCAATC...CGGATCCCCCGACCAGCGAAGCTGAGAAATTACAGAAACCTTCCAACTGCTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp ATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCCCCGAGTGGGTGGCTCTCTaGTTGCTGCTGCTATCAGTT +
Preference number: 4 (lower is better)
Translates to: MCAQIQLVTREQKCAHLPEWVAL*LLLLSV
Trigger: AACTGATAGCAGCAGCAACCAGAGAGCCACCCACTC...GGGGAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGGGACCAGCTCCGCCATaGGCTGGACTCAAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: CRLSYVCSDTVSDAGAEVGPAPP*AGLKAG
Trigger: TCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCC...CACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079195.6
3UTR CAA 72 bp AAGAGCGAAAACAAACACTCTAACTACGTCCATCCATaGGGACCTCTGACCCACTCTCATGGGCTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: KSENKHSNYVHP*GPLTHSHGLLP
Trigger: CGGGAGGAGCCCATGAGAGTGGGTCAGAGGTCCCAATGGATGGACGTAGTTAGAGTGTTTGTTTTCGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CAA 72 bp AGAGAGAGAGAGCTGCCACTGTGTTTCTGGGGGATCTaGAGTCACTCCGTTTGTCTGCTCCTGTCAAGCATG +
Preference number: 4 (lower is better)
Translates to: RERELPLCFWGI*SHSVCLLLSSM
Trigger: CATGCTTGACAGGAGCAGACAAACGGAGTGACTCAAGATCCCCCAGAAACACAGTGGCAGCTCTCTCTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp CAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTTCAGCGCCTCCTGGGTaGCAGGCTTTCTCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: QSLGKEPTHQSRLVISTASAPPG*QAFSQS
Trigger: ACTCTGCGAGAAAGCCTGTCACCCAGGAGGCGCTGA...AGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR TCA 90 bp AGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACTCTGTGGGGTCACAATaGAATAGCCATCCGGAGTCG +
Preference number: 4 (lower is better)
Translates to: RPAGSNTTLWHFRMEIGNSVGSQ*NSHPES
Trigger: CGACTCCGGATGGCTATTTCATTGTGACCCCACAGA...GTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp GTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCATACATGTGAAAAGCCGTGGGACTTGCGGTaGGTCCGGCTCTTTTTACTC +
Preference number: 4 (lower is better)
Translates to: VHISPTAIRLLQSHTCEKPWDLR*VRLFLL
Trigger: GAGTAAAAAGAGCCGGACTCACCGCAAGTCCCACGG...CTTTTCACATGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp ATGCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACACCTCCAGGCTCCTGCTaGCGTTGGGATGGAGGCATG +
Preference number: 4 (lower is better)
Translates to: MQSLGKEPTHQSRLVISTPPGSC*RWDGGM
Trigger: CATGCCTCCATCCCAACGTCAGCAGGAGCCTGGAGG...TGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR TCA 90 bp CTTCCAATGTGGAAACAGTGGTGGTGGAATAGGTATCTAGGTGGGAGGAGGAGAATCCACTGTCCACCGTaGTGCTGCTGCTATCCATGC +
Preference number: 4 (lower is better)
Translates to: LPMWKQWWWNRYLGGRRRIHCPP*CCCYPC
Trigger: GCATGGATAGCAGCAGCATCACGGTGGACAGTGGAT...TCTCCTCCTCCCACCTAGATACCTATTCCACCACCACTGTTTCCACATTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp ATCCTATCTGCCATGTGCTTCCCACCACCAATGCTTCCTCTATTCAAGAATCCACGGCCACCGCGGCTGTaGCCTTCTTGTTCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: ILSAMCFPPPMLPLFKNPRPPRL*PSCSRS
Trigger: ACTTCTGGAACAAGAAGGTCACAGCCGCGGTGGCCG...TGGATTCTTGAATAGAGGAAGCATTGGTGGTGGGAAGCACATGGCAGATAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp ATCCTATCTGCCATGTGCTTCCCACCACCAATGCTTCCTCTATTCAAGAATCCAGGGTGGAGGCATGCATaGTGTGCACGTCTTCTCGGC +
Preference number: 4 (lower is better)
Translates to: ILSAMCFPPPMLPLFKNPGWRHA*CARLLG
Trigger: GCCGAGAAGACGTGCACAGCATGCATGCCTCCACCC...TGGATTCTTGAATAGAGGAAGCATTGGTGGTGGGAAGCACATGGCAGATAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp GACGCGGGAGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGATTCATCAGGGCAGTGTaGCTCATGACATTTTCCACC +
Preference number: 4 (lower is better)
Translates to: DAGAEVCTSPLLLFGCYRFIRAV*LMTFST
Trigger: GGTGGAAAATGTCATGAGGCACACTGCCCTGATGAA...TCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCTCCCGCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp ATAGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCACGGAGGACCCGGCTTTaGTCCGGTGAGCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: IGRLGATQLCGISEWKLARRTRL*SGELFL
Trigger: AAGAAAAAGCTCACCGGAGCAAAGCCGGGTCCTCCG...TGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp AGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCATACACGGAGGACCCGGCTTTaGTCCGGTGAGCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SRSVHISPTAIRLLQSHTRRTRL*SGELFL
Trigger: AAGAAAAAGCTCACCGGAGCAAAGCCGGGTCCTCCG...TGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp ATAGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCATGGACACTCGCGTCTTaGTGTGTGACCGAGACTTCC +
Preference number: 4 (lower is better)
Translates to: IGRLGATQLCGISEWKLAWTLAS*CVTETS
Trigger: GGAAGTCTCGGTCACACAGCAAGACGCGAGTGTCCA...TGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp GTTGAAGGTTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTCTGACGACGTTCGTGTTGCTATaGATGATGAAGTTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: VEGWTSSAMGWTQSRILTTFVLL*MMKLSP
Trigger: AGGGGACAACTTCATCATGCATAGCAACACGAACGT...CGTCAGAATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp ATAGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCATGGCTGTGGCTTCGGTaGACTTTGGAGTGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: IGRLGATQLCGISEWKLAWLWLR*TLEWEL
Trigger: AAGCTCCCACTCCAAAGTGCACCGAAGCCACAGCCA...TGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp CCAAATGGCCTGGTGAGAACTGTGCCCATCACTGACATCACAAGCTTTGCCTTCTACTCTCAGGGGTTTTaGCTGGCTCCAGAAGGCTAC +
Preference number: 4 (lower is better)
Translates to: PNGLVRTVPITDITSFAFYSQGF*LAPEGY
Trigger: GTAGCCTTCTGGAGCCAGGCAAAACCCCTGAGAGTA...GAAGGCAAAGCTTGTGATGTCAGTGATGGGCACAGTTCTCACCAGGCCATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp AGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACTACTCTCAGGGGTTTTaGCTGGCTCCAGAAGGCTAC +
Preference number: 4 (lower is better)
Translates to: RPAGSNTTLWHFRMEIGNYSQGF*LAPEGY
Trigger: GTAGCCTTCTGGAGCCAGGCAAAACCCCTGAGAGTA...GTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp GCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACTGTACTCTCAGGGGTTTTaGCTGGCTCCAGAAGGCTAC +
Preference number: 4 (lower is better)
Translates to: AGWEQHNSVAFQNGNWQLYSQGF*LAPEGY
Trigger: GTAGCCTTCTGGAGCCAGGCAAAACCCCTGAGAGTA...CAGTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp TGTGTTGGAAGCCAGGCTCTCCCGAGTGCAGTCCAGATTAGTGATCTCTACAGCGGGTGGCTCTCTGGTTaGTGCTGCTATCAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: CVGSQALPSAVQISDLYSGWLSG*CCYQFL
Trigger: AAGAAACTGATAGCAGCAGCAACCAGAGAGCCACCC...GCTGTAGAGATCACTAATCTGGACTGCACTCGGGAGAGCCTGGCTTCCAACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp TCCGGCTCTTTTTACTCCTTCCACTGTGGTGGGCGGAGGACCCGGCTTTGCTCCCTCAGAACCACATTTTaGTTTGAACCTGGGAAACAT +
Preference number: 4 (lower is better)
Translates to: SGSFYSFHCGGRRTRLCSLRTTF*FEPGKH
Trigger: ATGTTTCCCAGGTTCAAAGCAAAATGTGGTTCTGAG...GGAGCAAAGCCGGGTCCTCCGCCCACCACAGTGGAAGGAGTAAAAAGAGCCGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
CDS-3UTR CCA 90 bp TCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCATCCATCAGCGCCTCCTaGGTGACAGGCTTTCTCGCA +
Preference number: 4 (lower is better)
Translates to: SLGKEPTHQSRLVISTAASISAS*VTGFLA
Trigger: TGCGAGAAAGCCTGTCACCCAGGAGGCGCTGATGGA...TGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp GGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACTTATGGTTCCTGGTTGTaGCGAGGTGCACTGAGACCT +
Preference number: 4 (lower is better)
Translates to: GRLGATQLCGISEWKLATYGSWL*RGALRP
Trigger: AGGTCTCAGTGCACCTCGCCACAACCAGGAACCATA...AGTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCGGGCGTTATGGTTCCTaGTTGTGGCGAGGTGCACTG +
Preference number: 4 (lower is better)
Translates to: AIFREGTNPPVQISDLYSGRYGS*LWRGAL
Trigger: CAGTGCACCTCGCCACAACCAGGAACCATAACGCCC...GCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp GTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCATACATGTGAAAAGAGGCAGAGGGCGTTATaGTTCCTGGTTGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: VHISPTAIRLLQSHTCEKRQRAL*FLVVAR
Trigger: CCTCGCCACAACCAGGAACCATAACGCCCTCTGCCT...CTTTTCACATGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAAGGCAGAGGGCGTTATaGTTCCTGGTTGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: LGKEPTHQSRLVISTAAERQRAL*FLVVAR
Trigger: CCTCGCCACAACCAGGAACCATAACGCCCTCTGCCT...TTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp GACACATGCGCATATCCTATCTGCCATGTGCTTCCCACCACCAATGCTTCCTCTTCTTCTCGGCAGCAGTaGCAAGAGTCGCAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: DTCAYPICHVLPTTNASSSSRQQ*QESQCF
Trigger: AAAGCACTGCGACTCTTGCCACTGCTGCCGAGAAGA...AGAGGAAGCATTGGTGGTGGGAAGCACATGGCAGATAGGATATGCGCATGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp AGTTGGAAGGTTTCTGTAATTTCTCAGCTTCGCTGGTCGGGGGATCCGTACTGGTCTTCTCGGCAGCAGTaGCAAGAGTCGCAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: SWKVSVISQLRWSGDPYWSSRQQ*QESQCF
Trigger: AAAGCACTGCGACTCTTGCCACTGCTGCCGAGAAGA...CCAGTACGGATCCCCCGACCAGCGAAGCTGAGAAATTACAGAAACCTTCCAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp CAGTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGACTTCCTCTGCAGGGTaGAGGCATGCATGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: QCVDFPMCAQIQLVTREQTSSAG*RHACCA
Trigger: TGCACAGCATGCATGCCTCCACCCTGCAGAGGAAGT...CTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCATACATGTGAAAAGGGTCTTTGCAGTCCTTaGCGGACTTCCTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: VHISPTAIRLLQSHTCEKGLCSP*RTSSAG
Trigger: CCCTGCAGAGGAAGTCCGCCAAGGACTGCAAAGACC...CTTTTCACATGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCGGTCTTTGCAGTCCTTaGCGGACTTCCTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: AIFREGTNPPVQISDLYSGLCSP*RTSSAG
Trigger: CCCTGCAGAGGAAGTCCGCCAAGGACTGCAAAGACC...GCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp TGGTATATCATCTTTAAAGCCCATCTTGCTATGCTAATGGCTGCTGGTCTAAGGCCCGAGGGATGGTCGTaGGCGTGTCCTCGTCTCGCA +
Preference number: 4 (lower is better)
Translates to: WYIIFKAHLAMLMAAGLRPEGWS*ACPRLA
Trigger: TGCGAGACGAGGACACGCCCACGACCATCCCTCGGG...CCTTAGACCAGCAGCCATTAGCATAGCAAGATGGGCTTTAAAGATGATATACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GTCATTTTCCTGGGATTAGATCTAACCCTGGTGCAGATGGATTTCCAGTACCTACTCCTTCCACTGTGGTaGGCGGAGGACCCGGCTTTG +
Preference number: 4 (lower is better)
Translates to: VIFLGLDLTLVQMDFQYLLLPLW*AEDPAL
Trigger: CAAAGCCGGGTCCTCCGCCCACCACAGTGGAAGGAG...TAGGTACTGGAAATCCATCTGCACCAGGGTTAGATCTAATCCCAGGAAAATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TCAAAGCAGGATTCTGACGGCGGTTGCTTTCAACAATGCTTGATGTGTTGGAAGTTACTCCTTCCACTGTaGTGGGCGGAGGACCCGGCT +
Preference number: 4 (lower is better)
Translates to: SKQDSDGGCFQQCLMCWKLLLPL*WAEDPA
Trigger: AGCCGGGTCCTCCGCCCACCACAGTGGAAGGAGTAA...CTTCCAACACATCAAGCATTGTTGAAAGCAACCGCCGTCAGAATCCTGCTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GGCCCAATCGTCGTAAACGTTGCTGTATCGGATGAGACAGAAGATCTGAGGCAGCCGAAGGATCTCCTTTaGACACTCGCGTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: GPIVVNVAVSDETEDLRQPKDLL*TLASCC
Trigger: ACAGCAAGACGCGAGTGTCCAAAGGAGATCCTTCGG...CTGCCTCAGATCTTCTGTCTCATCCGATACAGCAACGTTTACGACGATTGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp CAGTTGGAAGGTTTCTGTAATTTCTCAGCTTCGCTGGTCGGGGGATCCGTACTGCCGAAGGATCTCCTTTaGACACTCGCGTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QLEGFCNFSASLVGGSVLPKDLL*TLASCC
Trigger: ACAGCAAGACGCGAGTGTCCAAAGGAGATCCTTCGG...CAGTACGGATCCCCCGACCAGCGAAGCTGAGAAATTACAGAAACCTTCCAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCCCTGGACCTCTCATTCCTaGATCTCCGGTCCTGGGTAT +
Preference number: 4 (lower is better)
Translates to: YVCSDTVSDAGAEVCTSPWTSHS*ISGPGY
Trigger: ATACCCAGGACCGGAGATCCAGGAATGAGAGGTCCA...GGGAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp CAGTTGGAAGGTTTCTGTAATTTCTCAGCTTCGCTGGTCGGGGGATCCGTACTGGATTGGCTCGGTGTTTaGTCATCTTGGCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: QLEGFCNFSASLVGGSVLDWLGV*SSWLQP
Trigger: AGGCTGCAGCCAAGATGACCAAACACCGAGCCAATC...CAGTACGGATCCCCCGACCAGCGAAGCTGAGAAATTACAGAAACCTTCCAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp ATGCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACACTGCTGACGTTGGGATaGAGGCATGGCTTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: MQSLGKEPTHQSRLVISTLLTLG*RHGLGR
Trigger: GCGGCCCAAGCCATGCCTCCATCCCAACGTCAGCAG...TGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp ATGCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACATCCAGCCGGGCTGAGTaGGTGGCTCTCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: MQSLGKEPTHQSRLVISTSSRAE*VALWLL
Trigger: CAGCAACCAGAGAGCCACCCACTCAGCCCGGCTGGA...TGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp GTGCAAAATGCCGACAGATGTGTTGACCCTTTAAAGTTGAATGCCTCACAGAGATCCAGCCGGGCTGAGTaGGTGGCTCTCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: VQNADRCVDPLKLNASQRSSRAE*VALWLL
Trigger: CAGCAACCAGAGAGCCACCCACTCAGCCCGGCTGGA...TCTCTGTGAGGCATTCAACTTTAAAGGGTCAACACATCTGTCGGCATTTTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TTCACAAGTGAAGCCAGCAATGAGCCGTTAAAGGCCTCTGACTGCCTGTATACAGCTCTCCCGAGTGCGTaGGGAGTTGAATCCACTGTC +
Preference number: 4 (lower is better)
Translates to: FTSEASNEPLKASDCLYTALPSA*GVESTV
Trigger: GACAGTGGATTCAACTCCCCACGCACTCGGGAGAGC...TGTATACAGGCAGTCAGAGGCCTTTAACGGCTCATTGCTGGCTTCACTTGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079195.6
CDS-3UTR CCA 90 bp AGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACCAATGCTTGATGTGTTaGAAGCCAGGCTCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: RPAGSNTTLWHFRMEIGNQCLMC*KPGSPE
Trigger: CTCGGGAGAGCCTGGCTTCCAACACATCAAGCATTG...GTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079195.6
CDS-3UTR TCA 90 bp GTCATTTTCCTGGGATTAGATCTAACCCTGGTGCAGATGGATTTCCAGTACCTATCAGCGCCTCCTGGGTaGCAGGCTTTCTCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: VIFLGLDLTLVQMDFQYLSAPPG*QAFSQS
Trigger: ACTCTGCGAGAAAGCCTGTCACCCAGGAGGCGCTGA...TAGGTACTGGAAATCCATCTGCACCAGGGTTAGATCTAATCCCAGGAAAATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp CTCAGATCAGACTCTGATGCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGTCTGTGGGGTCACAATaGAATAGCCATCCGGAGTCG +
Preference number: 4 (lower is better)
Translates to: LRSDSDAIFREGTNPPVQSVGSQ*NSHPES
Trigger: CGACTCCGGATGGCTATTTCATTGTGACCCCACAGA...CTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGCATCAGAGTCTGATCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR TCA 90 bp TATAGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCTCTGTGGGGTCACAATaGAATAGCCATCCGGAGTCG +
Preference number: 4 (lower is better)
Translates to: YRPAGSNTTLWHFRMEIGSVGSQ*NSHPES
Trigger: CGACTCCGGATGGCTATTTCATTGTGACCCCACAGA...GCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp CAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGTAATGTCCTTTCCCTaGCGCAGCCTGAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: QSLGKEPTHQSRLVISTAVMSFP*RSLRQR
Trigger: CCTCTGCCTCAGGCTGCGTCAGGGAAAGGACATTAC...AGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR TCA 90 bp CTTTGCAGAGATGTAAACATCAGGCCCAATCGTCGTAAACGTTGCTGTATCGGAGTAATGTCCTTTCCCTaGCGCAGCCTGAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LCRDVNIRPNRRKRCCIGVMSFP*RSLRQR
Trigger: CCTCTGCCTCAGGCTGCGTCAGGGAAAGGACATTAC...TCCGATACAGCAACGTTTACGACGATTGGGCCTGATGTTTACATCTCTGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp CCCCGAACGTGCCTCCTGAAGTCATTACAAAGTATCTGTAAACATTACTCTGGCGTAATGTCCTTTCCCTaGCGCAGCCTGAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PRTCLLKSLQSICKHYSGVMSFP*RSLRQR
Trigger: CCTCTGCCTCAGGCTGCGTCAGGGAAAGGACATTAC...GCCAGAGTAATGTTTACAGATACTTTGTAATGACTTCAGGAGGCACGTTCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp GGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAACATTTTTTCCTGGCCCTTTCGGTaGCTCCTCCTTGTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: GTNPPVQISDLYSCRNIFSWPFR*LLLVPN
Trigger: GTTGGGCACAAGGAGGAGTCACCGAAAGGGCCAGGA...AAAAATGTTTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR TCA 90 bp TATAGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCCAGTGTGTCAACGGGTaGCTTTGGGTGAGACTTGAG +
Preference number: 4 (lower is better)
Translates to: YRPAGSNTTLWHFRMEIGQCVNG*LWVRLE
Trigger: CTCAAGTCTCACCCAAAGTCACCCGTTGACACACTG...GCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp ATAGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCACAGTGTGTCAACGGGTaGCTTTGGGTGAGACTTGAG +
Preference number: 4 (lower is better)
Translates to: IGRLGATQLCGISEWKLAQCVNG*LWVRLE
Trigger: CTCAAGTCTCACCCAAAGTCACCCGTTGACACACTG...TGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp TTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAATCCACTGTCCACCGTaGTGCTGCTGCTATCCATGC +
Preference number: 4 (lower is better)
Translates to: LGKEPTHQSRLVISTAAEIHCPP*CCCYPC
Trigger: GCATGGATAGCAGCAGCATCACGGTGGACAGTGGAT...TTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR GCA 90 bp AAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAACATTTGGGTGGAGGCATGCATaGTGTGCACGTCTTCTCGGC +
Preference number: 4 (lower is better)
Translates to: KEPTHQSRLVISTAAETFGWRHA*CARLLG
Trigger: GCCGAGAAGACGTGCACAGCATGCATGCCTCCACCC...AAATGTTTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR GCA 90 bp GTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAATGCAGGGTGGAGGCATaGATGCTGTGCACGTCTTCT +
Preference number: 4 (lower is better)
Translates to: VCRLSYVCSDTVSDAGAECRVEA*MLCTSS
Trigger: AGAAGACGTGCACAGCATGCATGCCTCCACCCTGCA...TTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp GCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCGGCAGTAAGGGTCTTTaGAGTCCTTGGCGGACTTCC +
Preference number: 4 (lower is better)
Translates to: AIFREGTNPPVQISDLYSGSKGL*SPWRTS
Trigger: GGAAGTCCGCCAAGGACTGCAAAGACCCTTACTGCC...GCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR GCA 90 bp AATGACAGGAACCCAACGAGAAACTGTAAACAAAGGTGGATGTCTGGACTGGCCGGCAGTAAGGGTCTTTaGAGTCCTTGGCGGACTTCC +
Preference number: 4 (lower is better)
Translates to: NDRNPTRNCKQRWMSGLAGSKGL*SPWRTS
Trigger: GGAAGTCCGCCAAGGACTGCAAAGACCCTTACTGCC...GGCCAGTCCAGACATCCACCTTTGTTTACAGTTTCTCGTTGGGTTCCTGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp GCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCCGGAGGACCCGGCTTTaGTCCGGTGAGCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: AIFREGTNPPVQISDLYSRRTRL*SGELFL
Trigger: AAGAAAAAGCTCACCGGAGCAAAGCCGGGTCCTCCG...GCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR GCA 90 bp TGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGGACACTCGCGTCTTaGTGTGTGACCGAGACTTCC +
Preference number: 4 (lower is better)
Translates to: CRLSYVCSDTVSDAGAEVWTLAS*CVTETS
Trigger: GGAAGTCTCGGTCACACAGCAAGACGCGAGTGTCCA...CACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp CGTGGCCCCATTCCCTATAGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCCAACTATTTCTGGAATaGATACCTCTTTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: RGPIPYRPAGSNTTLWHFQLFLE*IPLCSW
Trigger: CCAGCTACAAAGAGGTATGCATTCCAGAAATAGTTG...GAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCTATAGGGAATGGGGCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp TATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCCCGGAGCCACTGCATGGTaGCCACATCATCTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: YVCSDTVSDAGAEVCTSPGATAW*PHHLCF
Trigger: AAAACAGAGATGATGTGGGCACCATGCAGTGGCTCC...GGGAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp TTGGTCTCAGATCAGACTCTGATGCAATCTTTAGGGAAGGAACCAACCCACCAGCTCTCCAGGAGCCACTaGATGGTGCCCACATCATCT +
Preference number: 4 (lower is better)
Translates to: LVSDQTLMQSLGKEPTHQLSRSH*MVPTSS
Trigger: AGATGATGTGGGCACCATGCAGTGGCTCCTGGAGAG...CTGGTGGGTTGGTTCCTTCCCTAAAGATTGCATCAGAGTCTGATCTGAGACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp TATAGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCTGGGGTTGGAACACCTaGGAAACATGTGGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: YRPAGSNTTLWHFRMEIGWGWNT*ETCGQV
Trigger: CACCTGACCACATGTTTCCCAGGTGTTCCAACCCCA...GCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GAAGCCAGGCTCTCCCGAGTGCAGTCCAGATTAGTGATCTCTACAGCTGCAGAATTCTTGGCTTGGGGTTaGAACACCTGGGAAACATGT +
Preference number: 4 (lower is better)
Translates to: EARLSRVQSRLVISTAAEFLAWG*NTWETC
Trigger: ACATGTTTCCCAGGTGTTCCAACCCCAAGCCAAGAA...TTCTGCAGCTGTAGAGATCACTAATCTGGACTGCACTCGGGAGAGCCTGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GACGCGGGAGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAACCCTCTCGTCCAAGTaGTACCACTTACTGTTAGTT +
Preference number: 4 (lower is better)
Translates to: DAGAEVCTSPLLLFGCYRTLSSK*YHLLLV
Trigger: AACTAACAGTAAGTGGTACCACTTGGACGAGAGGGT...TCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCTCCCGCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAACTTCCTCTGCAGGGTaGAGGCATGCATGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: SLGKEPTHQSRLVISTAATSSAG*RHACCA
Trigger: TGCACAGCATGCATGCCTCCACCCTGCAGAGGAAGT...TGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp TCAAAGCAGGATTCTGACGGCGGTTGCTTTCAACAATGCTTGATGTGTTGGAAGGGTCTTTGCAGTCCTTaGCGGACTTCCTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SKQDSDGGCFQQCLMCWKGLCSP*RTSSAG
Trigger: CCCTGCAGAGGAAGTCCGCCAAGGACTGCAAAGACC...CTTCCAACACATCAAGCATTGTTGAAAGCAACCGCCGTCAGAATCCTGCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GCAAGCAGTTGGAAGGTTTCTGTAATTTCTCAGCTTCGCTGGTCGGGGGATCCGACTGGGCAGAGAAATTaGCCAGCTGTTTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: ASSWKVSVISQLRWSGDPTGQRN*PAVWSC
Trigger: ACAAGACCAAACAGCTGGCCAATTTCTCTGCCCAGT...CGGATCCCCCGACCAGCGAAGCTGAGAAATTACAGAAACCTTCCAACTGCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GTGTTGGAAGCCAGGCTCTCCCGAGTGCAGTCCAGATTAGTGATCTCTACAGCTACTGGGCAGAGAAATTaGCCAGCTGTTTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: VLEARLSRVQSRLVISTATGQRN*PAVWSC
Trigger: ACAAGACCAAACAGCTGGCCAATTTCTCTGCCCAGT...AGCTGTAGAGATCACTAATCTGGACTGCACTCGGGAGAGCCTGGCTTCCAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTCCTCGGGAGGAAACTaGGCAGAGAAATTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: AIFREGTNPPVQISDLYSSSGGN*AEKLAS
Trigger: GCTGGCCAATTTCTCTGCCCAGTTTCCTCCCGAGGA...GCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp TGGGGTTATCACAGAAATGACAGGAACCCAACGAGAAACTGTAAACAAAGGTGGTTACTCCTTCCACTGTaGTGGGCGGAGGACCCGGCT +
Preference number: 4 (lower is better)
Translates to: WGYHRNDRNPTRNCKQRWLLLPL*WAEDPA
Trigger: AGCCGGGTCCTCCGCCCACCACAGTGGAAGGAGTAA...CCACCTTTGTTTACAGTTTCTCGTTGGGTTCCTGTCATTTCTGTGATAACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp AAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAACATTTAGTGGGAGCTTCCCCTaGAGGGTTCGGGAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: KEPTHQSRLVISTAAETFSGSFP*RVRERA
Trigger: TGCCCTTTCCCGAACCCTCCAGGGGAAGCTCCCACT...AAATGTTTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp GTCATTTTCCTGGGATTAGATCTAACCCTGGTGCAGATGGATTTCCAGTACCTAGGCTTCGGTGCACTTTaGAGTGGGAGCTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: VIFLGLDLTLVQMDFQYLGFGAL*SGSFPW
Trigger: CCAGGGGAAGCTCCCACTCCAAAGTGCACCGAAGCC...TAGGTACTGGAAATCCATCTGCACCAGGGTTAGATCTAATCCCAGGAAAATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCATCCTGGGTATGGCTGTaGCTTCGGTGCACTTTGGAG +
Preference number: 4 (lower is better)
Translates to: SLGKEPTHQSRLVISTAASWVWL*LRCTLE
Trigger: CTCCAAAGTGCACCGAAGCCACAGCCATACCCAGGA...TGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp ATGCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACACTGGATCTCCGGTCCTaGGTATGGCTGTGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: MQSLGKEPTHQSRLVISTLDLRS*VWLWLR
Trigger: CCGAAGCCACAGCCATACCCAGGACCGGAGATCCAG...TGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp CCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCTCTCCTTGGCCTTGTTaGACCTCTCATTCCTGGATC +
Preference number: 4 (lower is better)
Translates to: PMCAQIQLVTREQKCAHLSPWPC*TSHSWI
Trigger: GATCCAGGAATGAGAGGTCCAACAAGGCCAAGGAGA...GAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TTGGTCTCAGATCAGACTCTGATGCAATCTTTAGGGAAGGAACCAACCCACCAGTCAAAAGAAGCCTCCTaGTTCCCTCCAGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LVSDQTLMQSLGKEPTHQSKEAS*FPPGSC
Trigger: GCAGGAGCCTGGAGGGAACCAGGAGGCTTCTTTTGA...CTGGTGGGTTGGTTCCTTCCCTAAAGATTGCATCAGAGTCTGATCTGAGACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp GCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCCCAGGAGCCACTGCATaGTGCCCACATCATCTCTGT +
Preference number: 4 (lower is better)
Translates to: AIFREGTNPPVQISDLYSPGATA*CPHHLC
Trigger: ACAGAGATGATGTGGGCACCATGCAGTGGCTCCTGG...GCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp GCAAGCAGTTGGAAGGTTTCTGTAATTTCTCAGCTTCGCTGGTCGGGGGATCCGGCTATCAGTTTCTTTTaGGGTGAGGAGGGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: ASSWKVSVISQLRWSGDPAISFF*GEEGEV
Trigger: AACCTCACCCTCCTCACCCCAAAAGAAACTGATAGC...CGGATCCCCCGACCAGCGAAGCTGAGAAATTACAGAAACCTTCCAACTGCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp ATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCCCCGCTATCAGTTTCTTTTaGGGTGAGGAGGGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: MCAQIQLVTREQKCAHLPAISFF*GEEGEV
Trigger: AACCTCACCCTCCTCACCCCAAAAGAAACTGATAGC...GGGGAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR CAA 72 bp CCAGTGTGTTTAGGGTATGCCGTAGAATTTCTTGGCTaGGGGTTGGAACACCTCTCCTGTTTCCACGCCTTC +
Preference number: 4 (lower is better)
Translates to: PVCLGYAVEFLG*GLEHLSCFHAF
Trigger: GAAGGCGTGGAAACAGGAGAGGTGTTCCAACCCCAAGCCAAGAAATTCTACGGCATACCCTAAACACACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CAA 72 bp ACGTTCGTGTTGCTATGCATGATGAAGTTGTCCCCTTaGTGTTCAATGATGAAGCAGCCCTCTCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: TFVLLCMMKLSP*CSMMKQPSLGA
Trigger: GGCCCCCAGAGAGGGCTGCTTCATCATTGAACACAAAGGGGACAACTTCATCATGCATAGCAACACGAACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
CDS-3UTR TCA 90 bp GCAGAAGGACAATCATACACTAGTAACAGAAGCTTGCAAGCAGTTGGAAGGTTTTCAGCGCCTCCTGGGTaGCAGGCTTTCTCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: AEGQSYTSNRSLQAVGRFSAPPG*QAFSQS
Trigger: ACTCTGCGAGAAAGCCTGTCACCCAGGAGGCGCTGA...AAACCTTCCAACTGCTTGCAAGCTTCTGTTACTAGTGTATGATTGTCCTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp TGGTGTTTAAATCACTGCTCCTCCACATTCCCTTTCCACTTGTGTTTCCTGAATTTCCCTGACGCAGCCTaGGGCAGAGGGCGTTATGGT +
Preference number: 4 (lower is better)
Translates to: WCLNHCSSTFPFHLCFLNFPDAA*GRGRYG
Trigger: ACCATAACGCCCTCTGCCTCAGGCTGCGTCAGGGAA...ATTCAGGAAACACAAGTGGAAAGGGAATGTGGAGGAGCAGTGATTTAAACACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp TTGGTCTCAGATCAGACTCTGATGCAATCTTTAGGGAAGGAACCAACCCACCAGGGGCAGTGTGCCTCATaGCATTTTCCACCGTCAAGT +
Preference number: 4 (lower is better)
Translates to: LVSDQTLMQSLGKEPTHQGQCAS*HFPPSS
Trigger: ACTTGACGGTGGAAAATGTCATGAGGCACACTGCCC...CTGGTGGGTTGGTTCCTTCCCTAAAGATTGCATCAGAGTCTGATCTGAGACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR TCA 90 bp GGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAACATTTTTCCGTGGGACTTGCGGTaGGTCCGGCTCTTTTTACTC +
Preference number: 4 (lower is better)
Translates to: GTNPPVQISDLYSCRNIFPWDLR*VRLFLL
Trigger: GAGTAAAAAGAGCCGGACTCACCGCAAGTCCCACGG...AAAAATGTTTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR TCA 90 bp GTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCATACATGTGAAAAGCAGTGTGTCAACGGGTaGCTTTGGGTGAGACTTGAG +
Preference number: 4 (lower is better)
Translates to: VHISPTAIRLLQSHTCEKQCVNG*LWVRLE
Trigger: CTCAAGTCTCACCCAAAGTCACCCGTTGACACACTG...CTTTTCACATGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp TGGTGTTTAAATCACTGCTCCTCCACATTCCCTTTCCACTTGTGTTTCCTGAATTACTGGCGCGGAAGTTaGAGGTTGGACCAGCTCCGC +
Preference number: 4 (lower is better)
Translates to: WCLNHCSSTFPFHLCFLNYWRGS*RLDQLR
Trigger: GCGGAGCTGGTCCAACCTTCAACTTCCGCGCCAGTA...ATTCAGGAAACACAAGTGGAAAGGGAATGTGGAGGAGCAGTGATTTAAACACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079195.6
CDS-3UTR GCA 90 bp CCAAATGGCCTGGTGAGAACTGTGCCCATCACTGACATCACAAGCTTTGCCTTCTGGCAAGAGTCGCAGTaGTTTCTGGGTAATGTCCTT +
Preference number: 4 (lower is better)
Translates to: PNGLVRTVPITDITSFAFWQESQ*FLGNVL
Trigger: AAGGACATTACCCAGAAAGCACTGCGACTCTTGCCA...GAAGGCAAAGCTTGTGATGTCAGTGATGGGCACAGTTCTCACCAGGCCATTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp CAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTTGGACACTCGCGTCTTaGTGTGTGACCGAGACTTCC +
Preference number: 4 (lower is better)
Translates to: QSLGKEPTHQSRLVISTAWTLAS*CVTETS
Trigger: GGAAGTCTCGGTCACACAGCAAGACGCGAGTGTCCA...AGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR GCA 90 bp GCATGCGTGCACAATACTACACAGTATTCTGCTCTTCCAATGTGGAAACAGTGGCCGGGGATATCCAGATaGGAGCCATCCGAAGGATCT +
Preference number: 4 (lower is better)
Translates to: ACVHNTTQYSALPMWKQWPGISR*EPSEGS
Trigger: AGATCCTTCGGATGGCTCGCATCTGGATATCCCCGG...CCACTGTTTCCACATTGGAAGAGCAGAATACTGTGTAGTATTGTGCACGCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp GCAAGCAGTTGGAAGGTTTCTGTAATTTCTCAGCTTCGCTGGTCGGGGGATCCGACGTTCGTGTTGCTATaGATGATGAAGTTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: ASSWKVSVISQLRWSGDPTFVLL*MMKLSP
Trigger: AGGGGACAACTTCATCATGCATAGCAACACGAACGT...CGGATCCCCCGACCAGCGAAGCTGAGAAATTACAGAAACCTTCCAACTGCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp ATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCCCCACGTTCGTGTTGCTATaGATGATGAAGTTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: MCAQIQLVTREQKCAHLPTFVLL*MMKLSP
Trigger: AGGGGACAACTTCATCATGCATAGCAACACGAACGT...GGGGAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp CAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTTGGCTGTGGCTTCGGTaGACTTTGGAGTGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: QSLGKEPTHQSRLVISTAWLWLR*TLEWEL
Trigger: AAGCTCCCACTCCAAAGTGCACCGAAGCCACAGCCA...AGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR GCA 90 bp GACGCGGGAGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGATTCTCAAACTTCCTCTaGAAGTCTCTTTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: DAGAEVCTSPLLLFGCYRFSNFL*KSLSFS
Trigger: GGAGAAGGAAAGAGACTTGCAGAGGAAGTTTGAGAA...TCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCTCCCGCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp CAGTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGGGGTGGCTCTCTGGTTaGTGCTGCTATCAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: QCVDFPMCAQIQLVTREQGWLSG*CCYQFL
Trigger: AAGAAACTGATAGCAGCAGCAACCAGAGAGCCACCC...CTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp AAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAACATTTTGCTGCTGCTATCCATaGTGTCCAGCCGGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: KEPTHQSRLVISTAAETFCCCYP*CPAGLS
Trigger: ACTCAGCCCGGCTGGACAGCATGGATAGCAGCAGCA...AAATGTTTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR GCA 90 bp AGTTGGAAGGTTTCTGTAATTTCTCAGCTTCGCTGGTCGGGGGATCCGTACTGGCTCCGCTTTGAAATCTaGGAAGATCTCGTACCCGAT +
Preference number: 4 (lower is better)
Translates to: SWKVSVISQLRWSGDPYWLRFEI*EDLVPD
Trigger: ATCGGGTACGAGATCTTCGCAGATTTCAAAGCGGAG...CCAGTACGGATCCCCCGACCAGCGAAGCTGAGAAATTACAGAAACCTTCCAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCATACATGTGAAAAGTGGGGTTGGAACACCTaGGAAACATGTGGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: VHISPTAIRLLQSHTCEKWGWNT*ETCGQV
Trigger: CACCTGACCACATGTTTCCCAGGTGTTCCAACCCCA...CTTTTCACATGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCATGGGGTTGGAACACCTaGGAAACATGTGGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: SLGKEPTHQSRLVISTAAWGWNT*ETCGQV
Trigger: CACCTGACCACATGTTTCCCAGGTGTTCCAACCCCA...TGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp GGCCCAATCGTCGTAAACGTTGCTGTATCGGATGAGACAGAAGATCTGAGGCAGTTCTTGGCTTGGGGTTaGAACACCTGGGAAACATGT +
Preference number: 4 (lower is better)
Translates to: GPIVVNVAVSDETEDLRQFLAWG*NTWETC
Trigger: ACATGTTTCCCAGGTGTTCCAACCCCAAGCCAAGAA...CTGCCTCAGATCTTCTGTCTCATCCGATACAGCAACGTTTACGACGATTGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACTGTGCCGTAGAATTTCTTaGCTTGGGGTTGGAACACCT +
Preference number: 4 (lower is better)
Translates to: AGWEQHNSVAFQNGNWQLCRRIS*LGVGTP
Trigger: AGGTGTTCCAACCCCAAGCCAAGAAATTCTACGGCA...CAGTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TGTGTTGGAAGCCAGGCTCTCCCGAGTGCAGTCCAGATTAGTGATCTCTACAGCACCCTCTCGTCCAAGTaGTACCACTTACTGTTAGTT +
Preference number: 4 (lower is better)
Translates to: CVGSQALPSAVQISDLYSTLSSK*YHLLLV
Trigger: AACTAACAGTAAGTGGTACCACTTGGACGAGAGGGT...GCTGTAGAGATCACTAATCTGGACTGCACTCGGGAGAGCCTGGCTTCCAACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCATACATGTGAAAAGTCTTCTCGGCAGCAGTaGCAAGAGTCGCAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: VHISPTAIRLLQSHTCEKSSRQQ*QESQCF
Trigger: AAAGCACTGCGACTCTTGCCACTGCTGCCGAGAAGA...CTTTTCACATGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TCAGCCCGAGGCCGTGAGAGTCAAGAGTCTCACCATCTTGATGAGACCATCTTAACTGGGCAGAGAAATTaGCCAGCTGTTTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: SARGRESQESHHLDETILTGQRN*PAVWSC
Trigger: ACAAGACCAAACAGCTGGCCAATTTCTCTGCCCAGT...TAAGATGGTCTCATCAAGATGGTGAGACTCTTGACTCTCACGGCCTCGGGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GTTATCACAGAAATGACAGGAACCCAACGAGAAACTGTAAACAAAGGTGGATGTCCACTTCCCGAGGGATaGTCGTGGGCGTGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: VITEMTGTQRETVNKGGCPLPEG*SWACPR
Trigger: ACGAGGACACGCCCACGACCATCCCTCGGGAAGTGG...ACATCCACCTTTGTTTACAGTTTCTCGTTGGGTTCCTGTCATTTCTGTGATAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAACCGAAGGATCTCCTTTaGACACTCGCGTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LGKEPTHQSRLVISTAAEPKDLL*TLASCC
Trigger: ACAGCAAGACGCGAGTGTCCAAAGGAGATCCTTCGG...TTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp GCAGAAGGACAATCATACACTAGTAACAGAAGCTTGCAAGCAGTTGGAAGGTTTAGTGGGAGCTTCCCCTaGAGGGTTCGGGAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: AEGQSYTSNRSLQAVGRFSGSFP*RVRERA
Trigger: TGCCCTTTCCCGAACCCTCCAGGGGAAGCTCCCACT...AAACCTTCCAACTGCTTGCAAGCTTCTGTTACTAGTGTATGATTGTCCTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TGGTGTTTAAATCACTGCTCCTCCACATTCCCTTTCCACTTGTGTTTCCTGAATGGCTTCGGTGCACTTTaGAGTGGGAGCTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: WCLNHCSSTFPFHLCFLNGFGAL*SGSFPW
Trigger: CCAGGGGAAGCTCCCACTCCAAAGTGCACCGAAGCC...ATTCAGGAAACACAAGTGGAAAGGGAATGTGGAGGAGCAGTGATTTAAACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCATACATGTGAAAAGTGGACCTCTCATTCCTaGATCTCCGGTCCTGGGTAT +
Preference number: 4 (lower is better)
Translates to: VHISPTAIRLLQSHTCEKWTSHS*ISGPGY
Trigger: ATACCCAGGACCGGAGATCCAGGAATGAGAGGTCCA...CTTTTCACATGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TTCACAAGTGAAGCCAGCAATGAGCCGTTAAAGGCCTCTGACTGCCTGTATACAGATTGGCTCGGTGTTTaGTCATCTTGGCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: FTSEASNEPLKASDCLYTDWLGV*SSWLQP
Trigger: AGGCTGCAGCCAAGATGACCAAACACCGAGCCAATC...TGTATACAGGCAGTCAGAGGCCTTTAACGGCTCATTGCTGGCTTCACTTGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGATTGGCTCGGTGTTTaGTCATCTTGGCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SLGKEPTHQSRLVISTAADWLGV*SSWLQP
Trigger: AGGCTGCAGCCAAGATGACCAAACACCGAGCCAATC...TGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp GTGCAAAATGCCGACAGATGTGTTGACCCTTTAAAGTTGAATGCCTCACAGAGATGCTCCTCCTTGCCCTaGATCAGCAAGACCTGCTCG +
Preference number: 4 (lower is better)
Translates to: VQNADRCVDPLKLNASQRCSSLP*ISKTCS
Trigger: CGAGCAGGTCTTGCTGATCCAGGGCAAGGAGGAGCA...TCTCTGTGAGGCATTCAACTTTAAAGGGTCAACACATCTGTCGGCATTTTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
3UTR CAA 72 bp TGCCCAGTTGAGCTGCGGAACTTTACCAGTCACTGGTaGTTAGCACAAGCTCAGAATGCTACCTCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: CPVELRNFTSHW*LAQAQNATSPK
Trigger: TTTGGGAGAGGTAGCATTCTGAGCTTGTGCTAACAACCAGTGACTGGTAAAGTTCCGCAGCTCAACTGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CAA 72 bp AGAGGCCACTCCTCGGGAGGAAACTGGGCAGAGAAATaGGCCAGCTGTTTGGTCTTGTCTTTCTTAAAACTC +
Preference number: 4 (lower is better)
Translates to: RGHSSGGNWAEK*ASCLVLSFLKL
Trigger: GAGTTTTAAGAAAGACAAGACCAAACAGCTGGCCAATTTCTCTGCCCAGTTTCCTCCCGAGGAGTGGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CAA 72 bp GGCGTCATGGGGAAATGGGACTCGATCACGTTCGTGTaGCTATGCATGATGAAGTTGTCCCCTTTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: GVMGKWDSITFV*LCMMKLSPLCS
Trigger: TGAACACAAAGGGGACAACTTCATCATGCATAGCAACACGAACGTGATCGAGTCCCATTTCCCCATGACGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
CDS-3UTR TCA 90 bp GCATGCGTGCACAATACTACACAGTATTCTGCTCTTCCAATGTGGAAACAGTGGTCTGTGGGGTCACAATaGAATAGCCATCCGGAGTCG +
Preference number: 4 (lower is better)
Translates to: ACVHNTTQYSALPMWKQWSVGSQ*NSHPES
Trigger: CGACTCCGGATGGCTATTTCATTGTGACCCCACAGA...CCACTGTTTCCACATTGGAAGAGCAGAATACTGTGTAGTATTGTGCACGCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp CTTTGCAGAGATGTAAACATCAGGCCCAATCGTCGTAAACGTTGCTGTATCGGAGGGCAGTGTGCCTCATaGCATTTTCCACCGTCAAGT +
Preference number: 4 (lower is better)
Translates to: LCRDVNIRPNRRKRCCIGGQCAS*HFPPSS
Trigger: ACTTGACGGTGGAAAATGTCATGAGGCACACTGCCC...TCCGATACAGCAACGTTTACGACGATTGGGCCTGATGTTTACATCTCTGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp ACACATGTTCCACTTACAGTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTTCGCGTCTTGCTGTGTaGCCGAGACTTCCCGTGGGA +
Preference number: 4 (lower is better)
Translates to: THVPLTVCRLSYVCSDTVSRLAV*PRLPVG
Trigger: TCCCACGGGAAGTCTCGGTCACACAGCAAGACGCGA...AACTGTATCTGAGCACACATAGGAAAGTCTACACACTGTAAGTGGAACATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp GTGCAAAATGCCGACAGATGTGTTGACCCTTTAAAGTTGAATGCCTCACAGAGAACGGGTGACTTTGGGTaGGACTTGAGGAGGGACAAG +
Preference number: 4 (lower is better)
Translates to: VQNADRCVDPLKLNASQRTGDFG*DLRRDK
Trigger: CTTGTCCCTCCTCAAGTCTCACCCAAAGTCACCCGT...TCTCTGTGAGGCATTCAACTTTAAAGGGTCAACACATCTGTCGGCATTTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp ATGCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAACGGGTGACTTTGGGTaGGACTTGAGGAGGGACAAG +
Preference number: 4 (lower is better)
Translates to: MQSLGKEPTHQSRLVISTTGDFG*DLRRDK
Trigger: CTTGTCCCTCCTCAAGTCTCACCCAAAGTCACCCGT...TGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR TCA 90 bp CAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTCAGTGTGTCAACGGGTaGCTTTGGGTGAGACTTGAG +
Preference number: 4 (lower is better)
Translates to: QSLGKEPTHQSRLVISTAQCVNG*LWVRLE
Trigger: CTCAAGTCTCACCCAAAGTCACCCGTTGACACACTG...AGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR TCA 90 bp AGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCATACAGCTTTCAACAATGCTTaGTGTGTTGGAAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: SRSVHISPTAIRLLQSHTAFNNA*CVGSQA
Trigger: AGCCTGGCTTCCAACACATCAAGCATTGTTGAAAGC...TGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079195.6
CDS-3UTR TCA 90 bp CAGTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGGCATGTTCTCCGCTTTaGAATCTGCGAAGATCTCGT +
Preference number: 4 (lower is better)
Translates to: QCVDFPMCAQIQLVTREQACSPL*NLRRSR
Trigger: ACGAGATCTTCGCAGATTTCAAAGCGGAGAACATGC...CTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACACACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp AAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAACATTTTGCAGGGTGGAGGCATaGATGCTGTGCACGTCTTCT +
Preference number: 4 (lower is better)
Translates to: KEPTHQSRLVISTAAETFCRVEA*MLCTSS
Trigger: AGAAGACGTGCACAGCATGCATGCCTCCACCCTGCA...AAATGTTTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR GCA 90 bp TATAGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCTTCATCAGGGCAGTGTaGCTCATGACATTTTCCACC +
Preference number: 4 (lower is better)
Translates to: YRPAGSNTTLWHFRMEIGFIRAV*LMTFST
Trigger: GGTGGAAAATGTCATGAGGCACACTGCCCTGATGAA...GCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp GGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAACATTTTTCCGGGGATATCCAGATaGGAGCCATCCGAAGGATCT +
Preference number: 4 (lower is better)
Translates to: GTNPPVQISDLYSCRNIFPGISR*EPSEGS
Trigger: AGATCCTTCGGATGGCTCGCATCTGGATATCCCCGG...AAAAATGTTTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR GCA 90 bp GTCATTTTCCTGGGATTAGATCTAACCCTGGTGCAGATGGATTTCCAGTACCTACCGGGGATATCCAGATaGGAGCCATCCGAAGGATCT +
Preference number: 4 (lower is better)
Translates to: VIFLGLDLTLVQMDFQYLPGISR*EPSEGS
Trigger: AGATCCTTCGGATGGCTCGCATCTGGATATCCCCGG...TAGGTACTGGAAATCCATCTGCACCAGGGTTAGATCTAATCCCAGGAAAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp TATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCCCACGTTCGTGTTGCTATaGATGATGAAGTTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: YVCSDTVSDAGAEVCTSPTFVLL*MMKLSP
Trigger: AGGGGACAACTTCATCATGCATAGCAACACGAACGT...GGGAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp CTTTGCAGAGATGTAAACATCAGGCCCAATCGTCGTAAACGTTGCTGTATCGGATACTCTCAGGGGTTTTaGCTGGCTCCAGAAGGCTAC +
Preference number: 4 (lower is better)
Translates to: LCRDVNIRPNRRKRCCIGYSQGF*LAPEGY
Trigger: GTAGCCTTCTGGAGCCAGGCAAAACCCCTGAGAGTA...TCCGATACAGCAACGTTTACGACGATTGGGCCTGATGTTTACATCTCTGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp ATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCCCCTCTCACTCGAGGTGTTaGACTGAAAATAGTCATCCA +
Preference number: 4 (lower is better)
Translates to: MCAQIQLVTREQKCAHLPSHSRC*TENSHP
Trigger: TGGATGACTATTTTCAGTGCAACACCTCGAGTGAGA...GGGGAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp TGTATGCAGTGCTTCTCAGAAAACAGGGACTTTGGCAGAAGCGCCTTTCCTGTAGGAGCCACTGCATGGTaGCCACATCATCTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: CMQCFSENRDFGRSAFPVGATAW*PHHLCF
Trigger: AAAACAGAGATGATGTGGGCACCATGCAGTGGCTCC...TACAGGAAAGGCGCTTCTGCCAAAGTCCCTGTTTTCTGAGAAGCACTGCATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp TTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAGGAGCCACTGCATGGTaGCCACATCATCTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: LGKEPTHQSRLVISTAAEGATAW*PHHLCF
Trigger: AAAACAGAGATGATGTGGGCACCATGCAGTGGCTCC...TTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR GCA 90 bp AAGCATCAAGTGAGCTGGAAAAGAGCGAAAACAAACACTCTAACTACGTCCATCTGCTGCTGCTATCCATaGTGTCCAGCCGGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: KHQVSWKRAKTNTLTTSICCCYP*CPAGLS
Trigger: ACTCAGCCCGGCTGGACAGCATGGATAGCAGCAGCA...GATGGACGTAGTTAGAGTGTTTGTTTTCGCTCTTTTCCAGCTCACTTGATGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp GGCAGGTGCACAAGGACCAGCCTGGCTCTAACCTTCCATTTCTGCCTTTCCAGATTGTTCCAGAAGTGTTaGATGTTCTCCGCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: GRCTRTSLALTFHFCLSRLFQKC*MFSALK
Trigger: TTTCAAAGCGGAGAACATGCAACACTTCTGGAACAA...TCTGGAAAGGCAGAAATGGAAGGTTAGAGCCAGGCTGGTCCTTGTGCACCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TGTGTTGGAAGCCAGGCTCTCCCGAGTGCAGTCCAGATTAGTGATCTCTACAGCAAGGATTTCCCCGAGTaGAATAAACTGAGACTGACT +
Preference number: 4 (lower is better)
Translates to: CVGSQALPSAVQISDLYSKDFPE*NKLRLT
Trigger: AGTCAGTCTCAGTTTATTCCACTCGGGGAAATCCTT...GCTGTAGAGATCACTAATCTGGACTGCACTCGGGAGAGCCTGGCTTCCAACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp CAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTTCTTCTCGGCAGCAGTaGCAAGAGTCGCAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: QSLGKEPTHQSRLVISTASSRQQ*QESQCF
Trigger: AAAGCACTGCGACTCTTGCCACTGCTGCCGAGAAGA...AGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp GTGCAAAATGCCGACAGATGTGTTGACCCTTTAAAGTTGAATGCCTCACAGAGATCCTCGGGAGGAAACTaGGCAGAGAAATTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VQNADRCVDPLKLNASQRSSGGN*AEKLAS
Trigger: GCTGGCCAATTTCTCTGCCCAGTTTCCTCCCGAGGA...TCTCTGTGAGGCATTCAACTTTAAAGGGTCAACACATCTGTCGGCATTTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp ATGCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGGCGTCATGGGGAAATaGGACTCGATCACGTTCGTG +
Preference number: 4 (lower is better)
Translates to: MQSLGKEPTHQSRLVISTGVMGK*DSITFV
Trigger: CACGAACGTGATCGAGTCCCATTTCCCCATGACGCC...TGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp ACACATGTTCCACTTACAGTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTGGCTTCGGTGCACTTTaGAGTGGGAGCTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: THVPLTVCRLSYVCSDTVGFGAL*SGSFPW
Trigger: CCAGGGGAAGCTCCCACTCCAAAGTGCACCGAAGCC...AACTGTATCTGAGCACACATAGGAAAGTCTACACACTGTAAGTGGAACATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GTTATCACAGAAATGACAGGAACCCAACGAGAAACTGTAAACAAAGGTGGATGTCTGGATCTCCGGTCCTaGGTATGGCTGTGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: VITEMTGTQRETVNKGGCLDLRS*VWLWLR
Trigger: CCGAAGCCACAGCCATACCCAGGACCGGAGATCCAG...ACATCCACCTTTGTTTACAGTTTCTCGTTGGGTTCCTGTCATTTCTGTGATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAACATTTTTGGTGTTTGGTCATCTTaGCTGCAGCCTTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GTNPPVQISDLYSCRNIFGVWSS*LQPSAR
Trigger: CCTGGCTGAAGGCTGCAGCCAAGATGACCAAACACC...AAAAATGTTTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp TTCTTCTTTCCTATTGGTTTTCCCTATTGGGTGTGCACACATCCTATTTTTGCACTGCTGACGTTGGGATaGAGGCATGGCTTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: FFFPIGFPYWVCTHPIFALLTLG*RHGLGR
Trigger: GCGGCCCAAGCCATGCCTCCATCCCAACGTCAGCAG...TGCAAAAATAGGATGTGTGCACACCCAATAGGGAAAACCAATAGGAAAGAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GGAAGGGGAACAACAGGCTTACAGTTGGAAGCCAAAGGATGTTGTGAAAGAAAATCAAAAGAAGCCTCCTaGTTCCCTCCAGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GRGTTGLQLEAKGCCERKSKEAS*FPPGSC
Trigger: GCAGGAGCCTGGAGGGAACCAGGAGGCTTCTTTTGA...TTTTCTTTCACAACATCCTTTGGCTTCCAACTGTAAGCCTGTTGTTCCCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp CTTTGCAGAGATGTAAACATCAGGCCCAATCGTCGTAAACGTTGCTGTATCGGAGAGTGGGTGGCTCTCTaGTTGCTGCTGCTATCAGTT +
Preference number: 4 (lower is better)
Translates to: LCRDVNIRPNRRKRCCIGEWVAL*LLLLSV
Trigger: AACTGATAGCAGCAGCAACCAGAGAGCCACCCACTC...TCCGATACAGCAACGTTTACGACGATTGGGCCTGATGTTTACATCTCTGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp GTGCAAAATGCCGACAGATGTGTTGACCCTTTAAAGTTGAATGCCTCACAGAGAGGGCAGTGTGCCTCATaGCATTTTCCACCGTCAAGT +
Preference number: 4 (lower is better)
Translates to: VQNADRCVDPLKLNASQRGQCAS*HFPPSS
Trigger: ACTTGACGGTGGAAAATGTCATGAGGCACACTGCCC...TCTCTGTGAGGCATTCAACTTTAAAGGGTCAACACATCTGTCGGCATTTTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp TGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTCTCGCAGAGTTCATTaGAGAGATGGCCAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: CRLSYVCSDTVSDAGAEVSRRVH*RDGQAK
Trigger: CTTTGCTTGGCCATCTCTGCAATGAACTCTGCGAGA...CACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp GCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGGCAAGAGTCGCAGTaGTTTCTGGGTAATGTCCTT +
Preference number: 4 (lower is better)
Translates to: AIFREGTNPPVQISDLYSWQESQ*FLGNVL
Trigger: AAGGACATTACCCAGAAAGCACTGCGACTCTTGCCA...GCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR GCA 90 bp AATGACAGGAACCCAACGAGAAACTGTAAACAAAGGTGGATGTCTGGACTGGCCTGGCAAGAGTCGCAGTaGTTTCTGGGTAATGTCCTT +
Preference number: 4 (lower is better)
Translates to: NDRNPTRNCKQRWMSGLAWQESQ*FLGNVL
Trigger: AAGGACATTACCCAGAAAGCACTGCGACTCTTGCCA...GGCCAGTCCAGACATCCACCTTTGTTTACAGTTTCTCGTTGGGTTCCTGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp TGGTGTTTAAATCACTGCTCCTCCACATTCCCTTTCCACTTGTGTTTCCTGAATGGCAGTAAGGGTCTTTaGAGTCCTTGGCGGACTTCC +
Preference number: 4 (lower is better)
Translates to: WCLNHCSSTFPFHLCFLNGSKGL*SPWRTS
Trigger: GGAAGTCCGCCAAGGACTGCAAAGACCCTTACTGCC...ATTCAGGAAACACAAGTGGAAAGGGAATGTGGAGGAGCAGTGATTTAAACACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp GTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAATTCATCAGGGCAGTGTaGCTCATGACATTTTCCACC +
Preference number: 4 (lower is better)
Translates to: VCRLSYVCSDTVSDAGAEFIRAV*LMTFST
Trigger: GGTGGAAAATGTCATGAGGCACACTGCCCTGATGAA...TTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp GGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAACATTTTTTACTCTCAGGGGTTTTaGCTGGCTCCAGAAGGCTAC +
Preference number: 4 (lower is better)
Translates to: GTNPPVQISDLYSCRNIFYSQGF*LAPEGY
Trigger: GTAGCCTTCTGGAGCCAGGCAAAACCCCTGAGAGTA...AAAAATGTTTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR GCA 90 bp AGTTGGAAGGTTTCTGTAATTTCTCAGCTTCGCTGGTCGGGGGATCCGTACTGGTCTCACTCGAGGTGTTaGACTGAAAATAGTCATCCA +
Preference number: 4 (lower is better)
Translates to: SWKVSVISQLRWSGDPYWSHSRC*TENSHP
Trigger: TGGATGACTATTTTCAGTGCAACACCTCGAGTGAGA...CCAGTACGGATCCCCCGACCAGCGAAGCTGAGAAATTACAGAAACCTTCCAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp CAGGATTCTGACGGCGGTTGCTTTCAACAATGCTTGATGTGTTGGAAGCCAGGCTTCTCAAACTTCCTCTaGAAGTCTCTTTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QDSDGGCFQQCLMCWKPGFSNFL*KSLSFS
Trigger: GGAGAAGGAAAGAGACTTGCAGAGGAAGTTTGAGAA...GCCTGGCTTCCAACACATCAAGCATTGTTGAAAGCAACCGCCGTCAGAATCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp CCAAATGGCCTGGTGAGAACTGTGCCCATCACTGACATCACAAGCTTTGCCTTCCTAGTAACAGAAGCTTaGAAGCAGTTGGAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: PNGLVRTVPITDITSFAFLVTEA*KQLEGF
Trigger: GAAACCTTCCAACTGCTTGCAAGCTTCTGTTACTAG...GAAGGCAAAGCTTGTGATGTCAGTGATGGGCACAGTTCTCACCAGGCCATTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079195.6
CDS-3UTR CCA 90 bp GCACTGAGACCTGTCAGGTACCCTCTCGTCCAAGTGGTACCACTTACTGTTAGTAAGGATTTCCCCGAGTaGAATAAACTGAGACTGACT +
Preference number: 4 (lower is better)
Translates to: ALRPVRYPLVQVVPLTVSKDFPE*NKLRLT
Trigger: AGTCAGTCTCAGTTTATTCCACTCGGGGAAATCCTT...ACTAACAGTAAGTGGTACCACTTGGACGAGAGGGTACCTGACAGGTCTCAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
CDS-3UTR CCA 90 bp CAGTTGGAAGGTTTCTGTAATTTCTCAGCTTCGCTGGTCGGGGGATCCGTACTGAAGGATTTCCCCGAGTaGAATAAACTGAGACTGACT +
Preference number: 4 (lower is better)
Translates to: QLEGFCNFSASLVGGSVLKDFPE*NKLRLT
Trigger: AGTCAGTCTCAGTTTATTCCACTCGGGGAAATCCTT...CAGTACGGATCCCCCGACCAGCGAAGCTGAGAAATTACAGAAACCTTCCAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp AATGACAGGAACCCAACGAGAAACTGTAAACAAAGGTGGATGTCTGGACTGGCCTTCTTGGCTTGGGGTTaGAACACCTGGGAAACATGT +
Preference number: 4 (lower is better)
Translates to: NDRNPTRNCKQRWMSGLAFLAWG*NTWETC
Trigger: ACATGTTTCCCAGGTGTTCCAACCCCAAGCCAAGAA...GGCCAGTCCAGACATCCACCTTTGTTTACAGTTTCTCGTTGGGTTCCTGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TTCACAAGTGAAGCCAGCAATGAGCCGTTAAAGGCCTCTGACTGCCTGTATACATTCTTGGCTTGGGGTTaGAACACCTGGGAAACATGT +
Preference number: 4 (lower is better)
Translates to: FTSEASNEPLKASDCLYTFLAWG*NTWETC
Trigger: ACATGTTTCCCAGGTGTTCCAACCCCAAGCCAAGAA...TGTATACAGGCAGTCAGAGGCCTTTAACGGCTCATTGCTGGCTTCACTTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TTGGTCTCAGATCAGACTCTGATGCAATCTTTAGGGAAGGAACCAACCCACCAGTGCCGTAGAATTTCTTaGCTTGGGGTTGGAACACCT +
Preference number: 4 (lower is better)
Translates to: LVSDQTLMQSLGKEPTHQCRRIS*LGVGTP
Trigger: AGGTGTTCCAACCCCAAGCCAAGAAATTCTACGGCA...CTGGTGGGTTGGTTCCTTCCCTAAAGATTGCATCAGAGTCTGATCTGAGACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp ATGCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACATATGGTTCCTGGTTGTaGCGAGGTGCACTGAGACCT +
Preference number: 4 (lower is better)
Translates to: MQSLGKEPTHQSRLVISTYGSWL*RGALRP
Trigger: AGGTCTCAGTGCACCTCGCCACAACCAGGAACCATA...TGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp GCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCACTGGGCAGAGAAATTaGCCAGCTGTTTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: AIFREGTNPPVQISDLYSTGQRN*PAVWSC
Trigger: ACAAGACCAAACAGCTGGCCAATTTCTCTGCCCAGT...GCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp TGGTGTTTAAATCACTGCTCCTCCACATTCCCTTTCCACTTGTGTTTCCTGAATGGCGTCATGGGGAAATaGGACTCGATCACGTTCGTG +
Preference number: 4 (lower is better)
Translates to: WCLNHCSSTFPFHLCFLNGVMGK*DSITFV
Trigger: CACGAACGTGATCGAGTCCCATTTCCCCATGACGCC...ATTCAGGAAACACAAGTGGAAAGGGAATGTGGAGGAGCAGTGATTTAAACACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TTCTTCTTTCCTATTGGTTTTCCCTATTGGGTGTGCACACATCCTATTTTTGCAAGTGGGAGCTTCCCCTaGAGGGTTCGGGAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: FFFPIGFPYWVCTHPIFASGSFP*RVRERA
Trigger: TGCCCTTTCCCGAACCCTCCAGGGGAAGCTCCCACT...TGCAAAAATAGGATGTGTGCACACCCAATAGGGAAAACCAATAGGAAAGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAACATTTTTTGGACCTCTCATTCCTaGATCTCCGGTCCTGGGTAT +
Preference number: 4 (lower is better)
Translates to: GTNPPVQISDLYSCRNIFWTSHS*ISGPGY
Trigger: ATACCCAGGACCGGAGATCCAGGAATGAGAGGTCCA...AAAAATGTTTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp TCAAAGCAGGATTCTGACGGCGGTTGCTTTCAACAATGCTTGATGTGTTGGAAGTCTCCTTGGCCTTGTTaGACCTCTCATTCCTGGATC +
Preference number: 4 (lower is better)
Translates to: SKQDSDGGCFQQCLMCWKSPWPC*TSHSWI
Trigger: GATCCAGGAATGAGAGGTCCAACAAGGCCAAGGAGA...CTTCCAACACATCAAGCATTGTTGAAAGCAACCGCCGTCAGAATCCTGCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GCAGAAGGACAATCATACACTAGTAACAGAAGCTTGCAAGCAGTTGGAAGGTTTGGTGTTTGGTCATCTTaGCTGCAGCCTTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: AEGQSYTSNRSLQAVGRFGVWSS*LQPSAR
Trigger: CCTGGCTGAAGGCTGCAGCCAAGATGACCAAACACC...AAACCTTCCAACTGCTTGCAAGCTTCTGTTACTAGTGTATGATTGTCCTTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACTGAAGGTCAAAGTGTCATaGTCCTCCTTATTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: AGWEQHNSVAFQNGNWQLKVKVS*SSLFFP
Trigger: AGGGAAGAATAAGGAGGACCATGACACTTTGACCTT...CAGTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TGTACTAAGGATGACAAGGAATCATCATTTACAATATGGTACACGGACACGATACTGCTGACGTTGGGATaGAGGCATGGCTTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: CTKDDKESSFTIWYTDTILLTLG*RHGLGR
Trigger: GCGGCCCAAGCCATGCCTCCATCCCAACGTCAGCAG...TATCGTGTCCGTGTACCATATTGTAAATGATGATTCCTTGTCATCCTTAGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TGGTATATCATCTTTAAAGCCCATCTTGCTATGCTAATGGCTGCTGGTCTAAGGCCAGGAGCCACTGCATaGTGCCCACATCATCTCTGT +
Preference number: 4 (lower is better)
Translates to: WYIIFKAHLAMLMAAGLRPGATA*CPHHLC
Trigger: ACAGAGATGATGTGGGCACCATGCAGTGGCTCCTGG...CCTTAGACCAGCAGCCATTAGCATAGCAAGATGGGCTTTAAAGATGATATACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GCAGAAGGACAATCATACACTAGTAACAGAAGCTTGCAAGCAGTTGGAAGGTTTCCAGGAGCCACTGCATaGTGCCCACATCATCTCTGT +
Preference number: 4 (lower is better)
Translates to: AEGQSYTSNRSLQAVGRFPGATA*CPHHLC
Trigger: ACAGAGATGATGTGGGCACCATGCAGTGGCTCCTGG...AAACCTTCCAACTGCTTGCAAGCTTCTGTTACTAGTGTATGATTGTCCTTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCATACATGTGAAAAGGCTATCAGTTTCTTTTaGGGTGAGGAGGGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: VHISPTAIRLLQSHTCEKAISFF*GEEGEV
Trigger: AACCTCACCCTCCTCACCCCAAAAGAAACTGATAGC...CTTTTCACATGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGGCTATCAGTTTCTTTTaGGGTGAGGAGGGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: CRLSYVCSDTVSDAGAEVAISFF*GEEGEV
Trigger: AACCTCACCCTCCTCACCCCAAAAGAAACTGATAGC...CACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp AAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAACATTTGAGTGGGTGGCTCTCTaGTTGCTGCTGCTATCAGTT +
Preference number: 4 (lower is better)
Translates to: KEPTHQSRLVISTAAETFEWVAL*LLLLSV
Trigger: AACTGATAGCAGCAGCAACCAGAGAGCCACCCACTC...AAATGTTTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR GCA 90 bp TCAAAGCAGGATTCTGACGGCGGTTGCTTTCAACAATGCTTGATGTGTTGGAAGTGGCAAGAGTCGCAGTaGTTTCTGGGTAATGTCCTT +
Preference number: 4 (lower is better)
Translates to: SKQDSDGGCFQQCLMCWKWQESQ*FLGNVL
Trigger: AAGGACATTACCCAGAAAGCACTGCGACTCTTGCCA...CTTCCAACACATCAAGCATTGTTGAAAGCAACCGCCGTCAGAATCCTGCTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp CTTTGCAGAGATGTAAACATCAGGCCCAATCGTCGTAAACGTTGCTGTATCGGATGGCAAGAGTCGCAGTaGTTTCTGGGTAATGTCCTT +
Preference number: 4 (lower is better)
Translates to: LCRDVNIRPNRRKRCCIGWQESQ*FLGNVL
Trigger: AAGGACATTACCCAGAAAGCACTGCGACTCTTGCCA...TCCGATACAGCAACGTTTACGACGATTGGGCCTGATGTTTACATCTCTGCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp ACACATGTTCCACTTACAGTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTTGCAGGGTGGAGGCATaGATGCTGTGCACGTCTTCT +
Preference number: 4 (lower is better)
Translates to: THVPLTVCRLSYVCSDTVCRVEA*MLCTSS
Trigger: AGAAGACGTGCACAGCATGCATGCCTCCACCCTGCA...AACTGTATCTGAGCACACATAGGAAAGTCTACACACTGTAAGTGGAACATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp TTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAACGTTCGTGTTGCTATaGATGATGAAGTTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: LGKEPTHQSRLVISTAAETFVLL*MMKLSP
Trigger: AGGGGACAACTTCATCATGCATAGCAACACGAACGT...TTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR GCA 90 bp GCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACTGCAACTATTTCTGGAATaGATACCTCTTTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: AGWEQHNSVAFQNGNWQLQLFLE*IPLCSW
Trigger: CCAGCTACAAAGAGGTATGCATTCCAGAAATAGTTG...CAGTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp ACTGGTATTTTAAAGGACTCACACACAAAGGGCTGGGGTCCCTTCTGCCCAGTTTCTCACTCGAGGTGTTaGACTGAAAATAGTCATCCA +
Preference number: 4 (lower is better)
Translates to: TGILKDSHTKGWGPFCPVSHSRC*TENSHP
Trigger: TGGATGACTATTTTCAGTGCAACACCTCGAGTGAGA...AACTGGGCAGAAGGGACCCCAGCCCTTTGTGTGTGAGTCCTTTAAAATACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp CTCAGATCAGACTCTGATGCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGTCTCACTCGAGGTGTTaGACTGAAAATAGTCATCCA +
Preference number: 4 (lower is better)
Translates to: LRSDSDAIFREGTNPPVQSHSRC*TENSHP
Trigger: TGGATGACTATTTTCAGTGCAACACCTCGAGTGAGA...CTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGCATCAGAGTCTGATCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR GCA 90 bp CAGTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGTTCTCAAACTTCCTCTaGAAGTCTCTTTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QCVDFPMCAQIQLVTREQFSNFL*KSLSFS
Trigger: GGAGAAGGAAAGAGACTTGCAGAGGAAGTTTGAGAA...CTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACACACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp ATGCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGGGTGGCTCTCTGGTTaGTGCTGCTATCAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: MQSLGKEPTHQSRLVISTGWLSG*CCYQFL
Trigger: AAGAAACTGATAGCAGCAGCAACCAGAGAGCCACCC...TGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR GCA 90 bp GTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGATTCTGACGGCGGTTaGTTTCAACAATGCTTGATG +
Preference number: 4 (lower is better)
Translates to: VCRLSYVCSDTVSDAGAEDSDGG*FQQCLM
Trigger: CATCAAGCATTGTTGAAAGCAACCGCCGTCAGAATC...TTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079195.6
CDS-3UTR GCA 90 bp TGGTGTTTAAATCACTGCTCCTCCACATTCCCTTTCCACTTGTGTTTCCTGAATCTAGATGCTCCTCCTTaGCCTGGATCAGCAAGACCT +
Preference number: 4 (lower is better)
Translates to: WCLNHCSSTFPFHLCFLNLDAPP*PGSARP
Trigger: AGGTCTTGCTGATCCAGGGCAAGGAGGAGCATCTAG...ATTCAGGAAACACAAGTGGAAAGGGAATGTGGAGGAGCAGTGATTTAAACACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp CAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTTTCTTGGCTTGGGGTTaGAACACCTGGGAAACATGT +
Preference number: 4 (lower is better)
Translates to: QSLGKEPTHQSRLVISTAFLAWG*NTWETC
Trigger: ACATGTTTCCCAGGTGTTCCAACCCCAAGCCAAGAA...AGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp CTTTGCAGAGATGTAAACATCAGGCCCAATCGTCGTAAACGTTGCTGTATCGGATGCCGTAGAATTTCTTaGCTTGGGGTTGGAACACCT +
Preference number: 4 (lower is better)
Translates to: LCRDVNIRPNRRKRCCIGCRRIS*LGVGTP
Trigger: AGGTGTTCCAACCCCAAGCCAAGAAATTCTACGGCA...TCCGATACAGCAACGTTTACGACGATTGGGCCTGATGTTTACATCTCTGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp ATCCTATCTGCCATGTGCTTCCCACCACCAATGCTTCCTCTATTCAAGAATCCATGCCGTAGAATTTCTTaGCTTGGGGTTGGAACACCT +
Preference number: 4 (lower is better)
Translates to: ILSAMCFPPPMLPLFKNPCRRIS*LGVGTP
Trigger: AGGTGTTCCAACCCCAAGCCAAGAAATTCTACGGCA...TGGATTCTTGAATAGAGGAAGCATTGGTGGTGGGAAGCACATGGCAGATAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TTGGTCTCAGATCAGACTCTGATGCAATCTTTAGGGAAGGAACCAACCCACCAGACCCTCTCGTCCAAGTaGTACCACTTACTGTTAGTT +
Preference number: 4 (lower is better)
Translates to: LVSDQTLMQSLGKEPTHQTLSSK*YHLLLV
Trigger: AACTAACAGTAAGTGGTACCACTTGGACGAGAGGGT...CTGGTGGGTTGGTTCCTTCCCTAAAGATTGCATCAGAGTCTGATCTGAGACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp TTCACAAGTGAAGCCAGCAATGAGCCGTTAAAGGCCTCTGACTGCCTGTATACAACCCTCTCGTCCAAGTaGTACCACTTACTGTTAGTT +
Preference number: 4 (lower is better)
Translates to: FTSEASNEPLKASDCLYTTLSSK*YHLLLV
Trigger: AACTAACAGTAAGTGGTACCACTTGGACGAGAGGGT...TGTATACAGGCAGTCAGAGGCCTTTAACGGCTCATTGCTGGCTTCACTTGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TGGTGTTTAAATCACTGCTCCTCCACATTCCCTTTCCACTTGTGTTTCCTGAATCCGAAGGATCTCCTTTaGACACTCGCGTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: WCLNHCSSTFPFHLCFLNPKDLL*TLASCC
Trigger: ACAGCAAGACGCGAGTGTCCAAAGGAGATCCTTCGG...ATTCAGGAAACACAAGTGGAAAGGGAATGTGGAGGAGCAGTGATTTAAACACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GGAAGGGGAACAACAGGCTTACAGTTGGAAGCCAAAGGATGTTGTGAAAGAAAATCTCCTTGGCCTTGTTaGACCTCTCATTCCTGGATC +
Preference number: 4 (lower is better)
Translates to: GRGTTGLQLEAKGCCERKSPWPC*TSHSWI
Trigger: GATCCAGGAATGAGAGGTCCAACAAGGCCAAGGAGA...TTTTCTTTCACAACATCCTTTGGCTTCCAACTGTAAGCCTGTTGTTCCCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp ATGCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACATCTCCTTGGCCTTGTTaGACCTCTCATTCCTGGATC +
Preference number: 4 (lower is better)
Translates to: MQSLGKEPTHQSRLVISTSPWPC*TSHSWI
Trigger: GATCCAGGAATGAGAGGTCCAACAAGGCCAAGGAGA...TGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp GTTATCACAGAAATGACAGGAACCCAACGAGAAACTGTAAACAAAGGTGGATGTGGTGTTTGGTCATCTTaGCTGCAGCCTTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: VITEMTGTQRETVNKGGCGVWSS*LQPSAR
Trigger: CCTGGCTGAAGGCTGCAGCCAAGATGACCAAACACC...ACATCCACCTTTGTTTACAGTTTCTCGTTGGGTTCCTGTCATTTCTGTGATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CAA 72 bp AGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTaGCTACAGAGCCATACATGTGAAAAGCAATACTCC +
Preference number: 4 (lower is better)
Translates to: SRSVHISPTAIR*LQSHTCEKQYS
Trigger: GGAGTATTGCTTTTCACATGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR CAA 72 bp TGTTTAGGGTATGCCGTAGAATTTCTTGGCTTGGGGTaGGAACACCTCTCCTGTTTCCACGCCTTCACAATT +
Preference number: 4 (lower is better)
Translates to: CLGYAVEFLGLG*EHLSCFHAFTI
Trigger: AATTGTGAAGGCGTGGAAACAGGAGAGGTGTTCCAACCCCAAGCCAAGAAATTCTACGGCATACCCTAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CAA 72 bp TCGGGAGGAAACTGGGCAGAGAAATTGGCCAGCTGTTaGGTCTTGTCTTTCTTAAAACTCAGCCGGAATAAC +
Preference number: 4 (lower is better)
Translates to: SGGNWAEKLASC*VLSFLKLSRNN
Trigger: GTTATTCCGGCTGAGTTTTAAGAAAGACAAGACCAAACAGCTGGCCAATTTCTCTGCCCAGTTTCCTCCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
3UTR CAA 72 bp GACTCGATCACGTTCGTGTTGCTATGCATGATGAAGTaGTCCCCTTTGTGTTCAATGATGAAGCAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: DSITFVLLCMMK*SPLCSMMKQPS
Trigger: AGAGGGCTGCTTCATCATTGAACACAAAGGGGACAACTTCATCATGCATAGCAACACGAACGTGATCGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
CDS-3UTR TCA 90 bp GAGCTTTGCCGAATTCTAAATTTTGCAACCATTAAGCCTGTGAACAACAATAATTCCTGGCCCTTTCGGTaGCTCCTCCTTGTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: ELCRILNFATIKPVNNNNSWPFR*LLLVPN
Trigger: GTTGGGCACAAGGAGGAGTCACCGAAAGGGCCAGGA...ATTATTGTTGTTCACAGGCTTAATGGTTGCAAAATTTAGAATTCGGCAAAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR TCA 90 bp GTACCAGTGTGTTTAGGGTATGCCGTAGAATTTCTTGGCTTGGGGTTGGAACACAACCACATTTTGCTTTaGACCTGGGAAACATGTGGT +
Preference number: 4 (lower is better)
Translates to: VPVCLGYAVEFLGLGLEHNHILL*TWETCG
Trigger: ACCACATGTTTCCCAGGTTCAAAGCAAAATGTGGTT...GTGTTCCAACCCCAAGCCAAGAAATTCTACGGCATACCCTAAACACACTGGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
CDS-3UTR GCA 90 bp AAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAACATTTTTCATCAGGGCAGTGTaGCTCATGACATTTTCCACC +
Preference number: 4 (lower is better)
Translates to: KEPTHQSRLVISTAAETFFIRAV*LMTFST
Trigger: GGTGGAAAATGTCATGAGGCACACTGCCCTGATGAA...AAATGTTTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR GCA 90 bp CTTCCAATGTGGAAACAGTGGTGGTGGAATAGGTATCTAGGTGGGAGGAGGAGACAACTATTTCTGGAATaGATACCTCTTTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: LPMWKQWWWNRYLGGRRRQLFLE*IPLCSW
Trigger: CCAGCTACAAAGAGGTATGCATTCCAGAAATAGTTG...TCTCCTCCTCCCACCTAGATACCTATTCCACCACCACTGTTTCCACATTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp AAGCATCAAGTGAGCTGGAAAAGAGCGAAAACAAACACTCTAACTACGTCCATCGGGTGGCTCTCTGGTTaGTGCTGCTATCAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: KHQVSWKRAKTNTLTTSIGWLSG*CCYQFL
Trigger: AAGAAACTGATAGCAGCAGCAACCAGAGAGCCACCC...GATGGACGTAGTTAGAGTGTTTGTTTTCGCTCTTTTCCAGCTCACTTGATGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp TCCCTAAATTTGCTCTTTCTTACAACCACTAAAAATCATCTCCCACAGCCTAATACGATGGCCAGAGAGTaGGGCGCGATCTGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SLNLLFLTTTKNHLPQPNTMARE*GAICRN
Trigger: GTTTCTGCAGATCGCGCCGCACTCTCTGGCCATCGT...ATTAGGCTGTGGGAGATGATTTTTAGTGGTTGTAAGAAAGAGCAAATTTAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAAAGGATTTCCCCGAGTaGAATAAACTGAGACTGACT +
Preference number: 4 (lower is better)
Translates to: LGKEPTHQSRLVISTAAEKDFPE*NKLRLT
Trigger: AGTCAGTCTCAGTTTATTCCACTCGGGGAAATCCTT...TTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp TGGGGTTATCACAGAAATGACAGGAACCCAACGAGAAACTGTAAACAAAGGTGGTGCCGTAGAATTTCTTaGCTTGGGGTTGGAACACCT +
Preference number: 4 (lower is better)
Translates to: WGYHRNDRNPTRNCKQRWCRRIS*LGVGTP
Trigger: AGGTGTTCCAACCCCAAGCCAAGAAATTCTACGGCA...CCACCTTTGTTTACAGTTTCTCGTTGGGTTCCTGTCATTTCTGTGATAACCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp CCAAATGGCCTGGTGAGAACTGTGCCCATCACTGACATCACAAGCTTTGCCTTCAATGAAATAAGTCTGTaGGGTCACAATGAAATAGCC +
Preference number: 4 (lower is better)
Translates to: PNGLVRTVPITDITSFAFNEISL*GHNEIA
Trigger: GGCTATTTCATTGTGACCCCACAGACTTATTTCATT...GAAGGCAAAGCTTGTGATGTCAGTGATGGGCACAGTTCTCACCAGGCCATTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp ACACATGTTCCACTTACAGTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTTATGGTTCCTGGTTGTaGCGAGGTGCACTGAGACCT +
Preference number: 4 (lower is better)
Translates to: THVPLTVCRLSYVCSDTVYGSWL*RGALRP
Trigger: AGGTCTCAGTGCACCTCGCCACAACCAGGAACCATA...AACTGTATCTGAGCACACATAGGAAAGTCTACACACTGTAAGTGGAACATGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAAAGGTCAAAGTGTCATaGTCCTCCTTATTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: VCRLSYVCSDTVSDAGAEKVKVS*SSLFFP
Trigger: AGGGAAGAATAAGGAGGACCATGACACTTTGACCTT...TTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAACATTTTTGCTATCAGTTTCTTTTaGGGTGAGGAGGGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: GTNPPVQISDLYSCRNIFAISFF*GEEGEV
Trigger: AACCTCACCCTCCTCACCCCAAAAGAAACTGATAGC...AAAAATGTTTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
3UTR CAA 72 bp AGAAGGGAGAAAGGAAGGGGAACAACAGGCTTACAGTaGGAAGCCAAAGGATGTTGTGAAAGAAAACCATGG +
Preference number: 4 (lower is better)
Translates to: RREKGRGTTGLQ*EAKGCCERKPW
Trigger: CCATGGTTTTCTTTCACAACATCCTTTGGCTTCCAACTGTAAGCCTGTTGTTCCCCTTCCTTTCTCCCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp TTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAACAACTATTTCTGGAATaGATACCTCTTTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: LGKEPTHQSRLVISTAAEQLFLE*IPLCSW
Trigger: CCAGCTACAAAGAGGTATGCATTCCAGAAATAGTTG...TTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR GCA 90 bp ACACATGTTCCACTTACAGTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTGGAGCCACTGCATGGTaGCCACATCATCTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: THVPLTVCRLSYVCSDTVGATAW*PHHLCF
Trigger: AAAACAGAGATGATGTGGGCACCATGCAGTGGCTCC...AACTGTATCTGAGCACACATAGGAAAGTCTACACACTGTAAGTGGAACATGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR GCA 90 bp CAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTTTCTCAAACTTCCTCTaGAAGTCTCTTTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QSLGKEPTHQSRLVISTAFSNFL*KSLSFS
Trigger: GGAGAAGGAAAGAGACTTGCAGAGGAAGTTTGAGAA...AGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR GCA 90 bp TCCCTAAATTTGCTCTTTCTTACAACCACTAAAAATCATCTCCCACAGCCTAATTGGATCAGCAAGACCTaGTCGTCGATCCAGCCTAGG +
Preference number: 4 (lower is better)
Translates to: SLNLLFLTTTKNHLPQPNWISKT*SSIQPR
Trigger: CCTAGGCTGGATCGACGAGCAGGTCTTGCTGATCCA...ATTAGGCTGTGGGAGATGATTTTTAGTGGTTGTAAGAAAGAGCAAATTTAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GGCTCTAACCTTCCATTTCTGCCTTTCCAGAGCCATTGGTACCTCACTCGGAAAAATGAAATAAGTCTGTaGGGTCACAATGAAATAGCC +
Preference number: 4 (lower is better)
Translates to: GSNLPFLPFQSHWYLTRKNEISL*GHNEIA
Trigger: GGCTATTTCATTGTGACCCCACAGACTTATTTCATT...TTTCCGAGTGAGGTACCAATGGCTCTGGAAAGGCAGAAATGGAAGGTTAGAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp AGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCATACAAATGAAATAAGTCTGTaGGGTCACAATGAAATAGCC +
Preference number: 4 (lower is better)
Translates to: SRSVHISPTAIRLLQSHTNEISL*GHNEIA
Trigger: GGCTATTTCATTGTGACCCCACAGACTTATTTCATT...TGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp CAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTAAGGTCAAAGTGTCATaGTCCTCCTTATTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: QSLGKEPTHQSRLVISTAKVKVS*SSLFFP
Trigger: AGGGAAGAATAAGGAGGACCATGACACTTTGACCTT...AGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp CTTTGCAGAGATGTAAACATCAGGCCCAATCGTCGTAAACGTTGCTGTATCGGAAAGGTCAAAGTGTCATaGTCCTCCTTATTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LCRDVNIRPNRRKRCCIGKVKVS*SSLFFP
Trigger: AGGGAAGAATAAGGAGGACCATGACACTTTGACCTT...TCCGATACAGCAACGTTTACGACGATTGGGCCTGATGTTTACATCTCTGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TCCCTAAATTTGCTCTTTCTTACAACCACTAAAAATCATCTCCCACAGCCTAATCCAGGAGCCACTGCATaGTGCCCACATCATCTCTGT +
Preference number: 4 (lower is better)
Translates to: SLNLLFLTTTKNHLPQPNPGATA*CPHHLC
Trigger: ACAGAGATGATGTGGGCACCATGCAGTGGCTCCTGG...ATTAGGCTGTGGGAGATGATTTTTAGTGGTTGTAAGAAAGAGCAAATTTAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GGCTCTAACCTTCCATTTCTGCCTTTCCAGAGCCATTGGTACCTCACTCGGAAAAAGCTTGCAAGCAGTTaGAAGGTTTCTGTAATTTCT +
Preference number: 4 (lower is better)
Translates to: GSNLPFLPFQSHWYLTRKKLASS*KVSVIS
Trigger: AGAAATTACAGAAACCTTCCAACTGCTTGCAAGCTT...TTTCCGAGTGAGGTACCAATGGCTCTGGAAAGGCAGAAATGGAAGGTTAGAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079195.6
3UTR CAA 72 bp GGAAACTGGGCAGAGAAATTGGCCAGCTGTTTGGTCTaGTCTTTCTTAAAACTCAGCCGGAATAACTTGAGA +
Preference number: 4 (lower is better)
Translates to: GNWAEKLASCLV*SFLKLSRNNLR
Trigger: TCTCAAGTTATTCCGGCTGAGTTTTAAGAAAGACAAGACCAAACAGCTGGCCAATTTCTCTGCCCAGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
CDS-3UTR GCA 90 bp CTTTGCAGAGATGTAAACATCAGGCCCAATCGTCGTAAACGTTGCTGTATCGGACAACTATTTCTGGAATaGATACCTCTTTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: LCRDVNIRPNRRKRCCIGQLFLE*IPLCSW
Trigger: CCAGCTACAAAGAGGTATGCATTCCAGAAATAGTTG...TCCGATACAGCAACGTTTACGACGATTGGGCCTGATGTTTACATCTCTGCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp TTGGTCTCAGATCAGACTCTGATGCAATCTTTAGGGAAGGAACCAACCCACCAGAATGAAATAAGTCTGTaGGGTCACAATGAAATAGCC +
Preference number: 4 (lower is better)
Translates to: LVSDQTLMQSLGKEPTHQNEISL*GHNEIA
Trigger: GGCTATTTCATTGTGACCCCACAGACTTATTTCATT...CTGGTGGGTTGGTTCCTTCCCTAAAGATTGCATCAGAGTCTGATCTGAGACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CCA 90 bp GTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAAATGAAATAAGTCTGTaGGGTCACAATGAAATAGCC +
Preference number: 4 (lower is better)
Translates to: VCRLSYVCSDTVSDAGAENEISL*GHNEIA
Trigger: GGCTATTTCATTGTGACCCCACAGACTTATTTCATT...TTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp AAGCATCAAGTGAGCTGGAAAAGAGCGAAAACAAACACTCTAACTACGTCCATCAAGGATTTCCCCGAGTaGAATAAACTGAGACTGACT +
Preference number: 4 (lower is better)
Translates to: KHQVSWKRAKTNTLTTSIKDFPE*NKLRLT
Trigger: AGTCAGTCTCAGTTTATTCCACTCGGGGAAATCCTT...GATGGACGTAGTTAGAGTGTTTGTTTTCGCTCTTTTCCAGCTCACTTGATGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CCA 90 bp GAGCTTTGCCGAATTCTAAATTTTGCAACCATTAAGCCTGTGAACAACAATAATTGGACCTCTCATTCCTaGATCTCCGGTCCTGGGTAT +
Preference number: 4 (lower is better)
Translates to: ELCRILNFATIKPVNNNNWTSHS*ISGPGY
Trigger: ATACCCAGGACCGGAGATCCAGGAATGAGAGGTCCA...ATTATTGTTGTTCACAGGCTTAATGGTTGCAAAATTTAGAATTCGGCAAAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CAA 72 bp CTTCTCCTGGTTGTCAATACAAATAGAAGAAAACCATaGGGATGTGTTGGTCTCAGATCAGACTCTGATGCA +
Preference number: 4 (lower is better)
Translates to: LLLVVNTNRRKP*GCVGLRSDSDA
Trigger: TGCATCAGAGTCTGATCTGAGACCAACACATCCCAATGGTTTTCTTCTATTTGTATTGACAACCAGGAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR GCA 90 bp ACACATGTTCCACTTACAGTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTTCTCACTCGAGGTGTTaGACTGAAAATAGTCATCCA +
Preference number: 4 (lower is better)
Translates to: THVPLTVCRLSYVCSDTVSHSRC*TENSHP
Trigger: TGGATGACTATTTTCAGTGCAACACCTCGAGTGAGA...AACTGTATCTGAGCACACATAGGAAAGTCTACACACTGTAAGTGGAACATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
3UTR CAA 72 bp CCTGAGATGTGTAAGATATATCAAACGGTAGATAAATaGCTTAACAGACATCCCAGAATGCACGGCACAGTT +
Preference number: 4 (lower is better)
Translates to: PEMCKIYQTVDK*LNRHPRMHGTV
Trigger: AACTGTGCCGTGCATTCTGGGATGTCTGTTAAGCAATTTATCTACCGTTTGATATATCTTACACATCTCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CAA 72 bp TTGGTTTTCCCTATTGGGTGTGCACACATCCTATTTTaGCACTCATTAAGGTCTCCTGAGATGTGTAAGATA +
Preference number: 4 (lower is better)
Translates to: LVFPIGCAHILF*HSLRSPEMCKI
Trigger: TATCTTACACATCTCAGGAGACCTTAATGAGTGCAAAAATAGGATGTGTGCACACCCAATAGGGAAAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
3UTR CAA 72 bp AGGAATAAAAGGCCTGAAGTTCAACGCTCCCTAAATTaGCTCTTTCTTACAACCACTAAAAATCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: RNKRPEVQRSLN*LFLTTTKNHLP
Trigger: TGGGAGATGATTTTTAGTGGTTGTAAGAAAGAGCAAATTTAGGGAGCGTTGAACTTCAGGCCTTTTATTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS GCA 90 bp GGTGGGAACCGGGGGCGAGGGCTGAACCGTCCCGGGCTTCTCCTCTaGGGAGCTGTCGGCCGGGCCCAGGACGATGGCCAGAGAGTGCGG +
Preference number: 5 (lower is better)
Translates to: GGNRGRGLNRPGLLL*GAVGRAQDDGQRVR
Trigger: CCGCACTCTCTGGCCATCGTCCTGGGCCCGGCCGACAGCTCCGCAGAGGAGAAGCCCGGGACGGTTCAGCCCTCGCCCCCGGTTCCCACC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS GCA 90 bp CGAAGGCCGCGGGGAAGCGCTTGTGCAGGCGGTAGTCCTTCTCGCTaGGGGACCTCATGCGGTCCGAGGCCCGGTCCGAGAAATCCGAGC +
Preference number: 5 (lower is better)
Translates to: RRPRGSACAGGSPSR*GTSCGPRPGPRNPS
Trigger: GCTCGGATTTCTCGGACCGGGCCTCGGACCGCATGAGGTCCCGCAGCGAGAAGGACTACCGCCTGCACAAGCGCTTCCCCGCGGCCTTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211737.2
CDS GCA 90 bp GGTCGCAGAGCCCTGCGTGTCCAGCCCTCCCGCAGCGCCTCTAGATaGTCCTCCTTGCCCTGGATCAGCAAGACCTGCTCGTCGATCCAG +
Preference number: 5 (lower is better)
Translates to: GRRALRVQPSRSASR*SSLPWISKTCSSIQ
Trigger: CTGGATCGACGAGCAGGTCTTGCTGATCCAGGGCAAGGAGGAGCATCTAGAGGCGCTGCGGGAGGGCTGGACACGCAGGGCTCTGCGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS GCA 90 bp CCCTGCGTGTCCAGCCCTCCCGCAGCGCCTCTAGATGCTCCTCCTTaGCCTGGATCAGCAAGACCTGCTCGTCGATCCAGCCTAGGAAAA +
Preference number: 5 (lower is better)
Translates to: PCVSSPPAAPLDAPP*PGSARPARRSSLGK
Trigger: TTTTCCTAGGCTGGATCGACGAGCAGGTCTTGCTGATCCAGGGCAAGGAGGAGCATCTAGAGGCGCTGCGGGAGGGCTGGACACGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp CCAAATGGCCTGGTGAGAACTGTGCCCATCACTGACATCACAAGCTTTGCCTTCGGCGAGCTGCCGGGGTaGGGTGGGAACCGGGGGCGA +
Preference number: 5 (lower is better)
Translates to: PNGLVRTVPITDITSFAFGELPG*GGNRGR
Trigger: TCGCCCCCGGTTCCCACCCAACCCCGGCAGCTCGCC...GAAGGCAAAGCTTGTGATGTCAGTGATGGGCACAGTTCTCACCAGGCCATTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp CGTGGCCCCATTCCCTATAGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCTCCTCCTCCGCGTTTTaGTTGGCCCCCTCCTCGGAG +
Preference number: 5 (lower is better)
Translates to: RGPIPYRPAGSNTTLWHFSSSAF*LAPSSE
Trigger: CTCCGAGGAGGGGGCCAACAAAAACGCGGAGGAGGA...GAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCTATAGGGAATGGGGCCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp CTGGTCGGGGGATCCGTACTGGCGCGGAAGTTGAAGGTTGGACCAGCTCCGCCACAATTCCGTGGGGAGTaGAATCCACTGTCCACCGTG +
Preference number: 5 (lower is better)
Translates to: LVGGSVLARKLKVGPAPPQFRGE*NPLSTV
Trigger: CACGGTGGACAGTGGATTCAACTCCCCACGGAATTG...TGGCGGAGCTGGTCCAACCTTCAACTTCCGCGCCAGTACGGATCCCCCGACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp AAGCCGTCACCACGGAGCCCCTCTGCATTGCTGACGCAAGCCAAGGGGACGGGCGCGGCTGTGACCTTCTaGTTCCAGAAGTGTTGCATG +
Preference number: 5 (lower is better)
Translates to: KPSPRSPSALLTQAKGTGAAVTF*FQKCCM
Trigger: CATGCAACACTTCTGGAACAAGAAGGTCACAGCCGC...GCCCGTCCCCTTGGCTTGCGTCAGCAATGCAGAGGGGCTCCGTGGTGACGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp TTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTCTGACGGCGGTTGCGCGCCCAGGGGACCTTaGGAGTTATCCATAGACCTG +
Preference number: 5 (lower is better)
Translates to: LDQLRHGLDSKQDSDGGCAPRGP*ELSIDL
Trigger: CAGGTCTATGGATAACTCCAAAGGTCCCCTGGGCGC...GCAACCGCCGTCAGAATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp CTGGTCGGGGGATCCGTACTGGCGCGGAAGTTGAAGGTTGGACCAGCTCCGCCATGGGTGGCTCTCTGGTaGCTGCTGCTATCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: LVGGSVLARKLKVGPAPPWVALW*LLLSVS
Trigger: AGAAACTGATAGCAGCAGCAACCAGAGAGCCACCCA...TGGCGGAGCTGGTCCAACCTTCAACTTCCGCGCCAGTACGGATCCCCCGACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp CTGGTCGGGGGATCCGTACTGGCGCGGAAGTTGAAGGTTGGACCAGCTCCGCCAGTAGAATTTCTTGGCTaGGGGTTGGAACACCTGGGA +
Preference number: 5 (lower is better)
Translates to: LVGGSVLARKLKVGPAPPVEFLG*GLEHLG
Trigger: TCCCAGGTGTTCCAACCCCAAGCCAAGAAATTCTAC...TGGCGGAGCTGGTCCAACCTTCAACTTCCGCGCCAGTACGGATCCCCCGACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GTTGAAGGTTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTCTGACGTGGCTTCGGTGCACTTaGGAGTGGGAGCTTCCCCTG +
Preference number: 5 (lower is better)
Translates to: VEGWTSSAMGWTQSRILTWLRCT*EWELPL
Trigger: CAGGGGAAGCTCCCACTCCAAAGTGCACCGAAGCCA...CGTCAGAATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GTTGAAGGTTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTCTGACGAGGCTCCTGCTGACGTaGGGATGGAGGCATGGCTTG +
Preference number: 5 (lower is better)
Translates to: VEGWTSSAMGWTQSRILTRLLLT*GWRHGL
Trigger: CAAGCCATGCCTCCATCCCAACGTCAGCAGGAGCCT...CGTCAGAATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GCGGGAGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCGCGCCCAGGGGACCTTaGGAGTTATCCATAGACCTG +
Preference number: 5 (lower is better)
Translates to: AGAEVCTSPLLLFGCYRAAPRGP*ELSIDL
Trigger: CAGGTCTATGGATAACTCCAAAGGTCCCCTGGGCGC...GGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCTCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GTTGAAGGTTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTCTGACGCGGTGTTTGGTCATCTaGGCTGCAGCCTTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: VEGWTSSAMGWTQSRILTRCLVI*AAAFSQ
Trigger: CTGGCTGAAGGCTGCAGCCAAGATGACCAAACACCG...CGTCAGAATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp CAGGATTCTGACGGCGGTTGCTTTCAACAATGCTTGATGTGTTGGAAGCCAGGCGGATGGAGGCATGGCTaGGGCCGCGGATGTCCCAAG +
Preference number: 5 (lower is better)
Translates to: QDSDGGCFQQCLMCWKPGGWRHG*GRGCPK
Trigger: CTTGGGACATCCGCGGCCCAAGCCATGCCTCCATCC...GCCTGGCTTCCAACACATCAAGCATTGTTGAAAGCAACCGCCGTCAGAATCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp AGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACGGATGGAGGCATGGCTaGGGCCGCGGATGTCCCAAG +
Preference number: 5 (lower is better)
Translates to: RPAGSNTTLWHFRMEIGNGWRHG*GRGCPK
Trigger: CTTGGGACATCCGCGGCCCAAGCCATGCCTCCATCC...GTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp CCAAATGGCCTGGTGAGAACTGTGCCCATCACTGACATCACAAGCTTTGCCTTCGGATGGAGGCATGGCTaGGGCCGCGGATGTCCCAAG +
Preference number: 5 (lower is better)
Translates to: PNGLVRTVPITDITSFAFGWRHG*GRGCPK
Trigger: CTTGGGACATCCGCGGCCCAAGCCATGCCTCCATCC...GAAGGCAAAGCTTGTGATGTCAGTGATGGGCACAGTTCTCACCAGGCCATTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GAAGCCAGGCTCTCCCGAGTGCAGTCCAGATTAGTGATCTCTACAGCTGCAGAATCCTCCTCCGCGTTTTaGTTGGCCCCCTCCTCGGAG +
Preference number: 5 (lower is better)
Translates to: EARLSRVQSRLVISTAAESSSAF*LAPSSE
Trigger: CTCCGAGGAGGGGGCCAACAAAAACGCGGAGGAGGA...TTCTGCAGCTGTAGAGATCACTAATCTGGACTGCACTCGGGAGAGCCTGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp TTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTCTGACGGCGGTTGCTTTCTTGGCTTGGGGTaGGAACACCTGGGAAACATG +
Preference number: 5 (lower is better)
Translates to: LDQLRHGLDSKQDSDGGCFLGLG*EHLGNM
Trigger: CATGTTTCCCAGGTGTTCCAACCCCAAGCCAAGAAA...GCAACCGCCGTCAGAATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GCGGAAGTTGAAGGTTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTCGTTATGGTTCCTGGTaGTGGCGAGGTGCACTGAGA +
Preference number: 5 (lower is better)
Translates to: AEVEGWTSSAMGWTQSRIRYGSW*WRGALR
Trigger: TCTCAGTGCACCTCGCCACAACCAGGAACCATAACG...AATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAACTTCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS GCA 90 bp GACCTTCTTGTTCCAGAAGTGTTGCATGTTCTCCGCTTTGAAATCTaGGAAGATCTCGTACCCGATGTGGTGTCGGGCGAGCTGCCGGGG +
Preference number: 5 (lower is better)
Translates to: DLLVPEVLHVLRFEI*EDLVPDVVSGELPG
Trigger: CCCCGGCAGCTCGCCCGACACCACATCGGGTACGAGATCTTCGCAGATTTCAAAGCGGAGAACATGCAACACTTCTGGAACAAGAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp AGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACAGGCTCGCCGCAAGGTaGTGCTCCGGGTCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: RPAGSNTTLWHFRMEIGNRLAAR*CSGSSS
Trigger: TGAAGAAGACCCGGAGCACAACCTTGCGGCGAGCCT...GTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211737.2
CDS-3UTR CAA 90 bp TATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCCCAGGCTCGCCGCAAGGTaGTGCTCCGGGTCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: YVCSDTVSDAGAEVCTSPRLAAR*CSGSSS
Trigger: TGAAGAAGACCCGGAGCACAACCTTGCGGCGAGCCT...GGGAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211737.2
CDS-3UTR CAA 90 bp GACACATGCGCATATCCTATCTGCCATGTGCTTCCCACCACCAATGCTTCCTCTGGGTCTTTGCAGTCCTaGGCGGACTTCCTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: DTCAYPICHVLPTTNASSGSLQS*ADFLCR
Trigger: CCTGCAGAGGAAGTCCGCCAAGGACTGCAAAGACCC...AGAGGAAGCATTGGTGGTGGGAAGCACATGGCAGATAGGATATGCGCATGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp CAGGATTCTGACGGCGGTTGCTTTCAACAATGCTTGATGTGTTGGAAGCCAGGCGGGTCTTTGCAGTCCTaGGCGGACTTCCTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: QDSDGGCFQQCLMCWKPGGSLQS*ADFLCR
Trigger: CCTGCAGAGGAAGTCCGCCAAGGACTGCAAAGACCC...GCCTGGCTTCCAACACATCAAGCATTGTTGAAAGCAACCGCCGTCAGAATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp TATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCCCGGGTCTTTGCAGTCCTaGGCGGACTTCCTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: YVCSDTVSDAGAEVCTSPGSLQS*ADFLCR
Trigger: CCTGCAGAGGAAGTCCGCCAAGGACTGCAAAGACCC...GGGAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GAAGTTGAAGGTTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTCTGGACCTGGATCTCTCCTaGGCCTTGTTGGACCTCTCA +
Preference number: 5 (lower is better)
Translates to: EVEGWTSSAMGWTQSRILDLDLS*ALLDLS
Trigger: TGAGAGGTCCAACAAGGCCAAGGAGAGATCCAGGTC...CAGAATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GAGAGAGCTGCCACTGTGTTTCTGGGGGATCTTGAGTCACTCCGTTTGTCTGCTCGGTGTTTGGTCATCTaGGCTGCAGCCTTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: ERAATVFLGDLESLRLSARCLVI*AAAFSQ
Trigger: CTGGCTGAAGGCTGCAGCCAAGATGACCAAACACCG...AGCAGACAAACGGAGTGACTCAAGATCCCCCAGAAACACAGTGGCAGCTCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp TGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGGGATGGAGGCATGGCTaGGGCCGCGGATGTCCCAAG +
Preference number: 5 (lower is better)
Translates to: CRLSYVCSDTVSDAGAEVGWRHG*GRGCPK
Trigger: CTTGGGACATCCGCGGCCCAAGCCATGCCTCCATCC...CACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCGGATGGAGGCATGGCTaGGGCCGCGGATGTCCCAAG +
Preference number: 5 (lower is better)
Translates to: AIFREGTNPPVQISDLYSGWRHG*GRGCPK
Trigger: CTTGGGACATCCGCGGCCCAAGCCATGCCTCCATCC...GCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS TCA 90 bp CACCTGGGAAACATGTGGTCAGGTGTTCCATCAGCGCCTCCTGGGTaGCAGGCTTTCTCGCAGAGTTCATTGCAGAGATGGCCAAGCAAA +
Preference number: 5 (lower is better)
Translates to: HLGNMWSGVPSAPPG*QAFSQSSLQRWPSK
Trigger: TTTGCTTGGCCATCTCTGCAATGAACTCTGCGAGAAAGCCTGTCACCCAGGAGGCGCTGATGGAACACCTGACCACATGTTTCCCAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000210030.2
ENSMUST00000210153.2
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GCGGAAGTTGAAGGTTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTTTTCTTGGCTTGGGGTaGGAACACCTGGGAAACATG +
Preference number: 5 (lower is better)
Translates to: AEVEGWTSSAMGWTQSRIFLGLG*EHLGNM
Trigger: CATGTTTCCCAGGTGTTCCAACCCCAAGCCAAGAAA...AATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAACTTCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp CCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCTTCGGTGACTCCTCCTaGTGCCCAACAGGTTCCCTG +
Preference number: 5 (lower is better)
Translates to: PMCAQIQLVTREQKCAHLFGDSS*CPTGSL
Trigger: CAGGGAACCTGTTGGGCACAAGGAGGAGTCACCGAA...GAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp TCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCATCCTCCTCCGCGTTTTaGTTGGCCCCCTCCTCGGAG +
Preference number: 5 (lower is better)
Translates to: SLGKEPTHQSRLVISTAASSSAF*LAPSSE
Trigger: CTCCGAGGAGGGGGCCAACAAAAACGCGGAGGAGGA...TGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CAA 90 bp ATTTTGAGCTGCCCAGTTGAGCTGCGGAACTTTACCAGTCACTGGTTGTTAGCATCCTCCTCCGCGTTTTaGTTGGCCCCCTCCTCGGAG +
Preference number: 5 (lower is better)
Translates to: ILSCPVELRNFTSHWLLASSSAF*LAPSSE
Trigger: CTCCGAGGAGGGGGCCAACAAAAACGCGGAGGAGGA...TGCTAACAACCAGTGACTGGTAAAGTTCCGCAGCTCAACTGGGCAGCTCAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS TCA 90 bp TGGACTCAAAGCAGGATTCTGACGGCGGTTGCTTTCAACAATGCTTaGTGTGTTGGAAGCCAGGCTCTCCCGAGTGCGTGGGGAGTTGAA +
Preference number: 5 (lower is better)
Translates to: WTQSRILTAVAFNNA*CVGSQALPSAWGVE
Trigger: TTCAACTCCCCACGCACTCGGGAGAGCCTGGCTTCCAACACATCAAGCATTGTTGAAAGCAACCGCCGTCAGAATCCTGCTTTGAGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079195.6
CDS TCA 90 bp AACCTGGGAAACATGTGGTCAGGTGTTCCATCAGCGCCTCCTGGGTaGCAGGCTTTCTCGCAGAGTTCATTGCAGAGATGGCCAAGCAAA +
Preference number: 5 (lower is better)
Translates to: NLGNMWSGVPSAPPG*QAFSQSSLQRWPSK
Trigger: TTTGCTTGGCCATCTCTGCAATGAACTCTGCGAGAAAGCCTGTCACCCAGGAGGCGCTGATGGAACACCTGACCACATGTTTCCCAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
CDS-3UTR CAA 90 bp GGCAGGTGCACAAGGACCAGCCTGGCTCTAACCTTCCATTTCTGCCTTTCCAGAGTAGAATTTCTTGGCTaGGGGTTGGAACACCTGGGA +
Preference number: 5 (lower is better)
Translates to: GRCTRTSLALTFHFCLSRVEFLG*GLEHLG
Trigger: TCCCAGGTGTTCCAACCCCAAGCCAAGAAATTCTAC...TCTGGAAAGGCAGAAATGGAAGGTTAGAGCCAGGCTGGTCCTTGTGCACCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp TTGGTCTCAGATCAGACTCTGATGCAATCTTTAGGGAAGGAACCAACCCACCAGGGGTCTTTGCAGTCCTaGGCGGACTTCCTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LVSDQTLMQSLGKEPTHQGSLQS*ADFLCR
Trigger: CCTGCAGAGGAAGTCCGCCAAGGACTGCAAAGACCC...CTGGTGGGTTGGTTCCTTCCCTAAAGATTGCATCAGAGTCTGATCTGAGACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CAA 90 bp TATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCCCTTGGACACTCGCGTCTaGCTGTGTGACCGAGACTTC +
Preference number: 5 (lower is better)
Translates to: YVCSDTVSDAGAEVCTSPLDTRV*LCDRDF
Trigger: GAAGTCTCGGTCACACAGCAAGACGCGAGTGTCCAA...GGGAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGGCTTCGGTGCACTTaGGAGTGGGAGCTTCCCCTG +
Preference number: 5 (lower is better)
Translates to: AIFREGTNPPVQISDLYSWLRCT*EWELPL
Trigger: CAGGGGAAGCTCCCACTCCAAAGTGCACCGAAGCCA...GCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CAA 90 bp GTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCATACATGTGAAAAGTGGCTTCGGTGCACTTaGGAGTGGGAGCTTCCCCTG +
Preference number: 5 (lower is better)
Translates to: VHISPTAIRLLQSHTCEKWLRCT*EWELPL
Trigger: CAGGGGAAGCTCCCACTCCAAAGTGCACCGAAGCCA...CTTTTCACATGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp AGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCATACACGGTGTTTGGTCATCTaGGCTGCAGCCTTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: SRSVHISPTAIRLLQSHTRCLVI*AAAFSQ
Trigger: CTGGCTGAAGGCTGCAGCCAAGATGACCAAACACCG...TGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GCGGGAGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCGTGCTGTGTAGAGGTTaGAACAGTGTGTCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: AGAEVCTSPLLLFGCYRAVLCRG*NSVSLL
Trigger: CAGCAAAGACACACTGTTCAAACCTCTACACAGCAC...GGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCTCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp TTGGTCTCAGATCAGACTCTGATGCAATCTTTAGGGAAGGAACCAACCCACCAGAGGCTCCTGCTGACGTaGGGATGGAGGCATGGCTTG +
Preference number: 5 (lower is better)
Translates to: LVSDQTLMQSLGKEPTHQRLLLT*GWRHGL
Trigger: CAAGCCATGCCTCCATCCCAACGTCAGCAGGAGCCT...CTGGTGGGTTGGTTCCTTCCCTAAAGATTGCATCAGAGTCTGATCTGAGACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CAA 90 bp GCAAGCAGTTGGAAGGTTTCTGTAATTTCTCAGCTTCGCTGGTCGGGGGATCCGTGGGTGGCTCTCTGGTaGCTGCTGCTATCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: ASSWKVSVISQLRWSGDPWVALW*LLLSVS
Trigger: AGAAACTGATAGCAGCAGCAACCAGAGAGCCACCCA...CGGATCCCCCGACCAGCGAAGCTGAGAAATTACAGAAACCTTCCAACTGCTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAACGAGTGCGTGGGGAGTaGAATCCACTGTCCACCGTG +
Preference number: 5 (lower is better)
Translates to: VCRLSYVCSDTVSDAGAERVRGE*NPLSTV
Trigger: CACGGTGGACAGTGGATTCAACTCCCCACGCACTCG...TTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079195.6
CDS-3UTR CAA 90 bp GCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACTGCAATTCCGTGGGGAGTaGAATCCACTGTCCACCGTG +
Preference number: 5 (lower is better)
Translates to: AGWEQHNSVAFQNGNWQLQFRGE*NPLSTV
Trigger: CACGGTGGACAGTGGATTCAACTCCCCACGGAATTG...CAGTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS GCA 90 bp TTCCATCAGCGCCTCCTGGGTGACAGGCTTTCTCGCAGAGTTCATTaGAGAGATGGCCAAGCAAAGGATTTCCCCGAGTGGAATAAACTG +
Preference number: 5 (lower is better)
Translates to: FHQRLLGDRLSRRVH*RDGQAKDFPEWNKL
Trigger: CAGTTTATTCCACTCGGGGAAATCCTTTGCTTGGCCATCTCTGCAATGAACTCTGCGAGAAAGCCTGTCACCCAGGAGGCGCTGATGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000209337.2
ENSMUST00000210030.2
ENSMUST00000210153.2
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS GCA 90 bp AAAGTCTCGGCCACCGCGGCTGTGACCTTCTTGTTCCAGAAGTGTTaGATGTTCTCCGCTTTGAAATCTGCGAAGATCTCGTACCCGATG +
Preference number: 5 (lower is better)
Translates to: KVSATAAVTFLFQKC*MFSALKSAKISYPM
Trigger: CATCGGGTACGAGATCTTCGCAGATTTCAAAGCGGAGAACATGCAACACTTCTGGAACAAGAAGGTCACAGCCGCGGTGGCCGAGACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp ATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCCCCTTTCTTGGCTTGGGGTaGGAACACCTGGGAAACATG +
Preference number: 5 (lower is better)
Translates to: MCAQIQLVTREQKCAHLPFLGLG*EHLGNM
Trigger: CATGTTTCCCAGGTGTTCCAACCCCAAGCCAAGAAA...GGGGAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp TATAGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCTTGGACACTCGCGTCTaGCTGTGTGACCGAGACTTC +
Preference number: 5 (lower is better)
Translates to: YRPAGSNTTLWHFRMEIGLDTRV*LCDRDF
Trigger: GAAGTCTCGGTCACACAGCAAGACGCGAGTGTCCAA...GCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GCGGAAGTTGAAGGTTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTTCGATCACGTTCGTGTaGCTATGCATGATGAAGTTG +
Preference number: 5 (lower is better)
Translates to: AEVEGWTSSAMGWTQSRISITFV*LCMMKL
Trigger: CAACTTCATCATGCATAGCAACACGAACGTGATCGA...AATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAACTTCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp CAGTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGGACCTGGATCTCTCCTaGGCCTTGTTGGACCTCTCA +
Preference number: 5 (lower is better)
Translates to: QCVDFPMCAQIQLVTREQDLDLS*ALLDLS
Trigger: TGAGAGGTCCAACAAGGCCAAGGAGAGATCCAGGTC...CTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGCGCCCAGGGGACCTTaGGAGTTATCCATAGACCTG +
Preference number: 5 (lower is better)
Translates to: VCRLSYVCSDTVSDAGAEAPRGP*ELSIDL
Trigger: CAGGTCTATGGATAACTCCAAAGGTCCCCTGGGCGC...TTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp AATGACAGGAACCCAACGAGAAACTGTAAACAAAGGTGGATGTCTGGACTGGCCGCGCCCAGGGGACCTTaGGAGTTATCCATAGACCTG +
Preference number: 5 (lower is better)
Translates to: NDRNPTRNCKQRWMSGLAAPRGP*ELSIDL
Trigger: CAGGTCTATGGATAACTCCAAAGGTCCCCTGGGCGC...GGCCAGTCCAGACATCCACCTTTGTTTACAGTTTCTCGTTGGGTTCCTGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAACGGTGTTTGGTCATCTaGGCTGCAGCCTTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: VCRLSYVCSDTVSDAGAERCLVI*AAAFSQ
Trigger: CTGGCTGAAGGCTGCAGCCAAGATGACCAAACACCG...TTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp TTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAACGGTGTTTGGTCATCTaGGCTGCAGCCTTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: LGKEPTHQSRLVISTAAERCLVI*AAAFSQ
Trigger: CTGGCTGAAGGCTGCAGCCAAGATGACCAAACACCG...TTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CAA 90 bp GTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCATACATGTGAAAAGTTCGGTGACTCCTCCTaGTGCCCAACAGGTTCCCTG +
Preference number: 5 (lower is better)
Translates to: VHISPTAIRLLQSHTCEKFGDSS*CPTGSL
Trigger: CAGGGAACCTGTTGGGCACAAGGAGGAGTCACCGAA...CTTTTCACATGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp TGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTTCGGTGACTCCTCCTaGTGCCCAACAGGTTCCCTG +
Preference number: 5 (lower is better)
Translates to: CRLSYVCSDTVSDAGAEVFGDSS*CPTGSL
Trigger: CAGGGAACCTGTTGGGCACAAGGAGGAGTCACCGAA...CACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp TGGGGTTATCACAGAAATGACAGGAACCCAACGAGAAACTGTAAACAAAGGTGGTCCTCCTCCGCGTTTTaGTTGGCCCCCTCCTCGGAG +
Preference number: 5 (lower is better)
Translates to: WGYHRNDRNPTRNCKQRWSSSAF*LAPSSE
Trigger: CTCCGAGGAGGGGGCCAACAAAAACGCGGAGGAGGA...CCACCTTTGTTTACAGTTTCTCGTTGGGTTCCTGTCATTTCTGTGATAACCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp AGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACTGGGTGGCTCTCTGGTaGCTGCTGCTATCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: RPAGSNTTLWHFRMEIGNWVALW*LLLSVS
Trigger: AGAAACTGATAGCAGCAGCAACCAGAGAGCCACCCA...GTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp CCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCTGGGTGGCTCTCTGGTaGCTGCTGCTATCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: PMCAQIQLVTREQKCAHLWVALW*LLLSVS
Trigger: AGAAACTGATAGCAGCAGCAACCAGAGAGCCACCCA...GAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp AGGCAGGTGCACAAGGACCAGCCTGGCTCTAACCTTCCATTTCTGCCTTTCCAGTGCATGTTCTCCGCTTaGAAATCTGCGAAGATCTCG +
Preference number: 5 (lower is better)
Translates to: RQVHKDQPGSNLPFLPFQCMFSA*KSAKIS
Trigger: CGAGATCTTCGCAGATTTCAAAGCGGAGAACATGCA...CTGGAAAGGCAGAAATGGAAGGTTAGAGCCAGGCTGGTCCTTGTGCACCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp CGCGTTTTTGTTGGCCCCCTCCTCGGAGTCGTCGTCATCAGAGACGTTGTAATATTCTCGCAGAGTTCATaGCAGAGATGGCCAAGCAAA +
Preference number: 5 (lower is better)
Translates to: RVFVGPLLGVVVIRDVVIFSQSS*QRWPSK
Trigger: TTTGCTTGGCCATCTCTGCAATGAACTCTGCGAGAA...TATTACAACGTCTCTGATGACGACGACTCCGAGGAGGGGGCCAACAAAAACGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
CDS-3UTR CAA 90 bp GCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACTGGTAGAATTTCTTGGCTaGGGGTTGGAACACCTGGGA +
Preference number: 5 (lower is better)
Translates to: AGWEQHNSVAFQNGNWQLVEFLG*GLEHLG
Trigger: TCCCAGGTGTTCCAACCCCAAGCCAAGAAATTCTAC...CAGTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp TCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCACGTTATGGTTCCTGGTaGTGGCGAGGTGCACTGAGA +
Preference number: 5 (lower is better)
Translates to: SLGKEPTHQSRLVISTAARYGSW*WRGALR
Trigger: TCTCAGTGCACCTCGCCACAACCAGGAACCATAACG...TGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CAA 90 bp ATTTTGAGCTGCCCAGTTGAGCTGCGGAACTTTACCAGTCACTGGTTGTTAGCACGTTATGGTTCCTGGTaGTGGCGAGGTGCACTGAGA +
Preference number: 5 (lower is better)
Translates to: ILSCPVELRNFTSHWLLARYGSW*WRGALR
Trigger: TCTCAGTGCACCTCGCCACAACCAGGAACCATAACG...TGCTAACAACCAGTGACTGGTAAAGTTCCGCAGCTCAACTGGGCAGCTCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GGCAGGTGCACAAGGACCAGCCTGGCTCTAACCTTCCATTTCTGCCTTTCCAGAGCCAGCTGTTTGGTCTaGTCTTTCTTAAAACTCAGC +
Preference number: 5 (lower is better)
Translates to: GRCTRTSLALTFHFCLSRASCLV*SFLKLS
Trigger: GCTGAGTTTTAAGAAAGACAAGACCAAACAGCTGGC...TCTGGAAAGGCAGAAATGGAAGGTTAGAGCCAGGCTGGTCCTTGTGCACCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp CCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCAACTGGGCAGAGAAATaGGCCAGCTGTTTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: PMCAQIQLVTREQKCAHLNWAEK*ASCLVL
Trigger: CAAGACCAAACAGCTGGCCAATTTCTCTGCCCAGTT...GAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp TCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCATTGGACACTCGCGTCTaGCTGTGTGACCGAGACTTC +
Preference number: 5 (lower is better)
Translates to: SLGKEPTHQSRLVISTAALDTRV*LCDRDF
Trigger: GAAGTCTCGGTCACACAGCAAGACGCGAGTGTCCAA...TGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CAA 90 bp GTTGAAGGTTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTCTGACGCTATGCATGATGAAGTaGTCCCCTTTGTGTTCAATG +
Preference number: 5 (lower is better)
Translates to: VEGWTSSAMGWTQSRILTLCMMK*SPLCSM
Trigger: CATTGAACACAAAGGGGACAACTTCATCATGCATAG...CGTCAGAATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GTCATTTTCCTGGGATTAGATCTAACCCTGGTGCAGATGGATTTCCAGTACCTATGGCTTCGGTGCACTTaGGAGTGGGAGCTTCCCCTG +
Preference number: 5 (lower is better)
Translates to: VIFLGLDLTLVQMDFQYLWLRCT*EWELPL
Trigger: CAGGGGAAGCTCCCACTCCAAAGTGCACCGAAGCCA...TAGGTACTGGAAATCCATCTGCACCAGGGTTAGATCTAATCCCAGGAAAATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GAAGCCAGGCTCTCCCGAGTGCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAGCACTAGAAGGTTCCTaGCTGCCACCAACTATTTCT +
Preference number: 5 (lower is better)
Translates to: EARLSRVQSRLVISTAAEALEGS*LPPTIS
Trigger: AGAAATAGTTGGTGGCAGCAAGGAACCTTCTAGTGC...TTCTGCAGCTGTAGAGATCACTAATCTGGACTGCACTCGGGAGAGCCTGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GTGTTGGAAGCCAGGCTCTCCCGAGTGCAGTCCAGATTAGTGATCTCTACAGCTGTGCTGTGTAGAGGTTaGAACAGTGTGTCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: VLEARLSRVQSRLVISTAVLCRG*NSVSLL
Trigger: CAGCAAAGACACACTGTTCAAACCTCTACACAGCAC...AGCTGTAGAGATCACTAATCTGGACTGCACTCGGGAGAGCCTGGCTTCCAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GTGCAAAATGCCGACAGATGTGTTGACCCTTTAAAGTTGAATGCCTCACAGAGAAGGCTCCTGCTGACGTaGGGATGGAGGCATGGCTTG +
Preference number: 5 (lower is better)
Translates to: VQNADRCVDPLKLNASQRRLLLT*GWRHGL
Trigger: CAAGCCATGCCTCCATCCCAACGTCAGCAGGAGCCT...TCTCTGTGAGGCATTCAACTTTAAAGGGTCAACACATCTGTCGGCATTTTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp TCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCACAATTCCGTGGGGAGTaGAATCCACTGTCCACCGTG +
Preference number: 5 (lower is better)
Translates to: SLGKEPTHQSRLVISTAAQFRGE*NPLSTV
Trigger: CACGGTGGACAGTGGATTCAACTCCCCACGGAATTG...TGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CAA 90 bp TTCACAAGTGAAGCCAGCAATGAGCCGTTAAAGGCCTCTGACTGCCTGTATACATCTAGATGCTCCTCCTaGCCCTGGATCAGCAAGACC +
Preference number: 5 (lower is better)
Translates to: FTSEASNEPLKASDCLYTSRCSS*PWISKT
Trigger: GGTCTTGCTGATCCAGGGCAAGGAGGAGCATCTAGA...TGTATACAGGCAGTCAGAGGCCTTTAACGGCTCATTGCTGGCTTCACTTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp CCAAATGGCCTGGTGAGAACTGTGCCCATCACTGACATCACAAGCTTTGCCTTCTTCTCGCAGAGTTCATaGCAGAGATGGCCAAGCAAA +
Preference number: 5 (lower is better)
Translates to: PNGLVRTVPITDITSFAFFSQSS*QRWPSK
Trigger: TTTGCTTGGCCATCTCTGCAATGAACTCTGCGAGAA...GAAGGCAAAGCTTGTGATGTCAGTGATGGGCACAGTTCTCACCAGGCCATTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCAACTGTTCTCGCAGAGTTCATaGCAGAGATGGCCAAGCAAA +
Preference number: 5 (lower is better)
Translates to: AGWEQHNSVAFQNGNWQLFSQSS*QRWPSK
Trigger: TTTGCTTGGCCATCTCTGCAATGAACTCTGCGAGAA...CAGTTGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp ATCCTATCTGCCATGTGCTTCCCACCACCAATGCTTCCTCTATTCAAGAATCCACGTTATGGTTCCTGGTaGTGGCGAGGTGCACTGAGA +
Preference number: 5 (lower is better)
Translates to: ILSAMCFPPPMLPLFKNPRYGSW*WRGALR
Trigger: TCTCAGTGCACCTCGCCACAACCAGGAACCATAACG...TGGATTCTTGAATAGAGGAAGCATTGGTGGTGGGAAGCACATGGCAGATAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp TCAAAGCAGGATTCTGACGGCGGTTGCTTTCAACAATGCTTGATGTGTTGGAAGCGTTATGGTTCCTGGTaGTGGCGAGGTGCACTGAGA +
Preference number: 5 (lower is better)
Translates to: SKQDSDGGCFQQCLMCWKRYGSW*WRGALR
Trigger: TCTCAGTGCACCTCGCCACAACCAGGAACCATAACG...CTTCCAACACATCAAGCATTGTTGAAAGCAACCGCCGTCAGAATCCTGCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp TGGTGTTTAAATCACTGCTCCTCCACATTCCCTTTCCACTTGTGTTTCCTGAATGGGTCTTTGCAGTCCTaGGCGGACTTCCTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: WCLNHCSSTFPFHLCFLNGSLQS*ADFLCR
Trigger: CCTGCAGAGGAAGTCCGCCAAGGACTGCAAAGACCC...ATTCAGGAAACACAAGTGGAAAGGGAATGTGGAGGAGCAGTGATTTAAACACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp ATCCTATCTGCCATGTGCTTCCCACCACCAATGCTTCCTCTATTCAAGAATCCATTGGACACTCGCGTCTaGCTGTGTGACCGAGACTTC +
Preference number: 5 (lower is better)
Translates to: ILSAMCFPPPMLPLFKNPLDTRV*LCDRDF
Trigger: GAAGTCTCGGTCACACAGCAAGACGCGAGTGTCCAA...TGGATTCTTGAATAGAGGAAGCATTGGTGGTGGGAAGCACATGGCAGATAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp ATGCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCGCCCAGGGGACCTTaGGAGTTATCCATAGACCTG +
Preference number: 5 (lower is better)
Translates to: MQSLGKEPTHQSRLVISTAPRGP*ELSIDL
Trigger: CAGGTCTATGGATAACTCCAAAGGTCCCCTGGGCGC...TGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CAA 90 bp GGCCCAATCGTCGTAAACGTTGCTGTATCGGATGAGACAGAAGATCTGAGGCAGGCACTAGAAGGTTCCTaGCTGCCACCAACTATTTCT +
Preference number: 5 (lower is better)
Translates to: GPIVVNVAVSDETEDLRQALEGS*LPPTIS
Trigger: AGAAATAGTTGGTGGCAGCAAGGAACCTTCTAGTGC...CTGCCTCAGATCTTCTGTCTCATCCGATACAGCAACGTTTACGACGATTGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp ATGCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACATTCGGTGACTCCTCCTaGTGCCCAACAGGTTCCCTG +
Preference number: 5 (lower is better)
Translates to: MQSLGKEPTHQSRLVISTFGDSS*CPTGSL
Trigger: CAGGGAACCTGTTGGGCACAAGGAGGAGTCACCGAA...TGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CAA 90 bp GAAGTTGAAGGTTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTCTGAATATTTCTTTCCTTTaGTCCAGGCTGCTGGGTTCT +
Preference number: 5 (lower is better)
Translates to: EVEGWTSSAMGWTQSRILNISFL*SRLLGS
Trigger: AGAACCCAGCAGCCTGGACAAAAGGAAAGAAATATT...CAGAATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGGGTGGCTCTCTGGTaGCTGCTGCTATCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: AIFREGTNPPVQISDLYSWVALW*LLLSVS
Trigger: AGAAACTGATAGCAGCAGCAACCAGAGAGCCACCCA...GCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CAA 90 bp CCCCGAACGTGCCTCCTGAAGTCATTACAAAGTATCTGTAAACATTACTCTGGCCAATTCCGTGGGGAGTaGAATCCACTGTCCACCGTG +
Preference number: 5 (lower is better)
Translates to: PRTCLLKSLQSICKHYSGQFRGE*NPLSTV
Trigger: CACGGTGGACAGTGGATTCAACTCCCCACGGAATTG...GCCAGAGTAATGTTTACAGATACTTTGTAATGACTTCAGGAGGCACGTTCGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp CGCGTTTTTGTTGGCCCCCTCCTCGGAGTCGTCGTCATCAGAGACGTTGTAATAGAACCACATTTTGCTTaGAACCTGGGAAACATGTGG +
Preference number: 5 (lower is better)
Translates to: RVFVGPLLGVVVIRDVVIEPHFA*NLGNMW
Trigger: CCACATGTTTCCCAGGTTCAAAGCAAAATGTGGTTC...TATTACAACGTCTCTGATGACGACGACTCCGAGGAGGGGGCCAACAAAAACGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000209337.2
CDS-3UTR CAA 90 bp TCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCATTTCTTGGCTTGGGGTaGGAACACCTGGGAAACATG +
Preference number: 5 (lower is better)
Translates to: SLGKEPTHQSRLVISTAAFLGLG*EHLGNM
Trigger: CATGTTTCCCAGGTGTTCCAACCCCAAGCCAAGAAA...TGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CAA 90 bp GGCCCAATCGTCGTAAACGTTGCTGTATCGGATGAGACAGAAGATCTGAGGCAGGCCAGCTGTTTGGTCTaGTCTTTCTTAAAACTCAGC +
Preference number: 5 (lower is better)
Translates to: GPIVVNVAVSDETEDLRQASCLV*SFLKLS
Trigger: GCTGAGTTTTAAGAAAGACAAGACCAAACAGCTGGC...CTGCCTCAGATCTTCTGTCTCATCCGATACAGCAACGTTTACGACGATTGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GTTGAAGGTTGGACCAGCTCCGCCATGGGCTGGACTCAAAGCAGGATTCTGACGAAATTGGCCAGCTGTTaGGTCTTGTCTTTCTTAAAA +
Preference number: 5 (lower is better)
Translates to: VEGWTSSAMGWTQSRILTKLASC*VLSFLK
Trigger: TTTTAAGAAAGACAAGACCAAACAGCTGGCCAATTT...CGTCAGAATCCTGCTTTGAGTCCAGCCCATGGCGGAGCTGGTCCAACCTTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GTGCAAAATGCCGACAGATGTGTTGACCCTTTAAAGTTGAATGCCTCACAGAGATTGGACACTCGCGTCTaGCTGTGTGACCGAGACTTC +
Preference number: 5 (lower is better)
Translates to: VQNADRCVDPLKLNASQRLDTRV*LCDRDF
Trigger: GAAGTCTCGGTCACACAGCAAGACGCGAGTGTCCAA...TCTCTGTGAGGCATTCAACTTTAAAGGGTCAACACATCTGTCGGCATTTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GAGAGAGCTGCCACTGTGTTTCTGGGGGATCTTGAGTCACTCCGTTTGTCTGCTATGAAGTTGTCCCCTTaGTGTTCAATGATGAAGCAG +
Preference number: 5 (lower is better)
Translates to: ERAATVFLGDLESLRLSAMKLSP*CSMMKQ
Trigger: CTGCTTCATCATTGAACACAAAGGGGACAACTTCAT...AGCAGACAAACGGAGTGACTCAAGATCCCCCAGAAACACAGTGGCAGCTCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp ATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCCCCATGAAGTTGTCCCCTTaGTGTTCAATGATGAAGCAG +
Preference number: 5 (lower is better)
Translates to: MCAQIQLVTREQKCAHLPMKLSP*CSMMKQ
Trigger: CTGCTTCATCATTGAACACAAAGGGGACAACTTCAT...GGGGAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp CACATGTTCCACTTACAGTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTATGGCTTCGGTGCACTTaGGAGTGGGAGCTTCCCCTG +
Preference number: 5 (lower is better)
Translates to: HMFHLQCVDFPMCAQIQLWLRCT*EWELPL
Trigger: CAGGGGAAGCTCCCACTCCAAAGTGCACCGAAGCCA...TAACTGTATCTGAGCACACATAGGAAAGTCTACACACTGTAAGTGGAACATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp AAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAACATTTGACCTGGATCTCTCCTaGGCCTTGTTGGACCTCTCA +
Preference number: 5 (lower is better)
Translates to: KEPTHQSRLVISTAAETFDLDLS*ALLDLS
Trigger: TGAGAGGTCCAACAAGGCCAAGGAGAGATCCAGGTC...AAATGTTTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CAA 90 bp CGCTCCCTAAATTTGCTCTTTCTTACAACCACTAAAAATCATCTCCCACAGCCTTTCGGTGACTCCTCCTaGTGCCCAACAGGTTCCCTG +
Preference number: 5 (lower is better)
Translates to: RSLNLLFLTTTKNHLPQPFGDSS*CPTGSL
Trigger: CAGGGAACCTGTTGGGCACAAGGAGGAGTCACCGAA...AGGCTGTGGGAGATGATTTTTAGTGGTTGTAAGAAAGAGCAAATTTAGGGAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp ACACATGTTCCACTTACAGTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGGCTCCTGCTGACGTaGGGATGGAGGCATGGCTTG +
Preference number: 5 (lower is better)
Translates to: THVPLTVCRLSYVCSDTVRLLLT*GWRHGL
Trigger: CAAGCCATGCCTCCATCCCAACGTCAGCAGGAGCCT...AACTGTATCTGAGCACACATAGGAAAGTCTACACACTGTAAGTGGAACATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp AACACAAAGCTGTGGTTCCAGTGGAGAATAATCTTGGCAAAGCCCAGAGAGGGCTGCTTTCAACAATGCTaGATGTGTTGGAAGCCAGGC +
Preference number: 5 (lower is better)
Translates to: NTKLWFQWRIILAKPREGCFQQC*MCWKPG
Trigger: GCCTGGCTTCCAACACATCAAGCATTGTTGAAAGCA...GCCCTCTCTGGGCTTTGCCAAGATTATTCTCCACTGGAACCACAGCTTTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079195.6
CDS-3UTR CAA 90 bp ATCCTATCTGCCATGTGCTTCCCACCACCAATGCTTCCTCTATTCAAGAATCCAAACTGGGCAGAGAAATaGGCCAGCTGTTTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: ILSAMCFPPPMLPLFKNPNWAEK*ASCLVL
Trigger: CAAGACCAAACAGCTGGCCAATTTCTCTGCCCAGTT...TGGATTCTTGAATAGAGGAAGCATTGGTGGTGGGAAGCACATGGCAGATAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp CAGGATTCTGACGGCGGTTGCTTTCAACAATGCTTGATGTGTTGGAAGCCAGGCATGAAGTTGTCCCCTTaGTGTTCAATGATGAAGCAG +
Preference number: 5 (lower is better)
Translates to: QDSDGGCFQQCLMCWKPGMKLSP*CSMMKQ
Trigger: CTGCTTCATCATTGAACACAAAGGGGACAACTTCAT...GCCTGGCTTCCAACACATCAAGCATTGTTGAAAGCAACCGCCGTCAGAATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp ATAGGCCGGCTGGGAGCAACACAACTCTGTGGCATTTCAGAATGGAAATTGGCATCGATCACGTTCGTGTaGCTATGCATGATGAAGTTG +
Preference number: 5 (lower is better)
Translates to: IGRLGATQLCGISEWKLASITFV*LCMMKL
Trigger: CAACTTCATCATGCATAGCAACACGAACGTGATCGA...TGCCAATTTCCATTCTGAAATGCCACAGAGTTGTGTTGCTCCCAGCCGGCCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp CTGGAGCTTTGCCGAATTCTAAATTTTGCAACCATTAAGCCTGTGAACAACAATGTACTGGCGCGGAAGTaGAAGGTTGGACCAGCTCCG +
Preference number: 5 (lower is better)
Translates to: LELCRILNFATIKPVNNNVLARK*KVGPAP
Trigger: CGGAGCTGGTCCAACCTTCAACTTCCGCGCCAGTAC...ATTGTTGTTCACAGGCTTAATGGTTGCAAAATTTAGAATTCGGCAAAGCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079195.6
CDS-3UTR CAA 90 bp GGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAACATTTTTGTAGAATTTCTTGGCTaGGGGTTGGAACACCTGGGA +
Preference number: 5 (lower is better)
Translates to: GTNPPVQISDLYSCRNIFVEFLG*GLEHLG
Trigger: TCCCAGGTGTTCCAACCCCAAGCCAAGAAATTCTAC...AAAAATGTTTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CAA 90 bp CAGGATTCTGACGGCGGTTGCTTTCAACAATGCTTGATGTGTTGGAAGCCAGGCTTGAGACCGAATTTTTaGGACTGCTTTTCACCATCT +
Preference number: 5 (lower is better)
Translates to: QDSDGGCFQQCLMCWKPGLRPNF*DCFSPS
Trigger: AGATGGTGAAAAGCAGTCCAAAAAATTCGGTCTCAA...GCCTGGCTTCCAACACATCAAGCATTGTTGAAAGCAACCGCCGTCAGAATCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp TATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGTGCACATCTCCCTTGAGACCGAATTTTTaGGACTGCTTTTCACCATCT +
Preference number: 5 (lower is better)
Translates to: YVCSDTVSDAGAEVCTSPLRPNF*DCFSPS
Trigger: AGATGGTGAAAAGCAGTCCAAAAAATTCGGTCTCAA...GGGAGATGTGCACACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp TGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGGCCAGCTGTTTGGTCTaGTCTTTCTTAAAACTCAGC +
Preference number: 5 (lower is better)
Translates to: CRLSYVCSDTVSDAGAEVASCLV*SFLKLS
Trigger: GCTGAGTTTTAAGAAAGACAAGACCAAACAGCTGGC...CACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCGCCAGCTGTTTGGTCTaGTCTTTCTTAAAACTCAGC +
Preference number: 5 (lower is better)
Translates to: AIFREGTNPPVQISDLYSASCLV*SFLKLS
Trigger: GCTGAGTTTTAAGAAAGACAAGACCAAACAGCTGGC...GCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CAA 90 bp TTCACAAGTGAAGCCAGCAATGAGCCGTTAAAGGCCTCTGACTGCCTGTATACAGCCAGCTGTTTGGTCTaGTCTTTCTTAAAACTCAGC +
Preference number: 5 (lower is better)
Translates to: FTSEASNEPLKASDCLYTASCLV*SFLKLS
Trigger: GCTGAGTTTTAAGAAAGACAAGACCAAACAGCTGGC...TGTATACAGGCAGTCAGAGGCCTTTAACGGCTCATTGCTGGCTTCACTTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GAGAGAGCTGCCACTGTGTTTCTGGGGGATCTTGAGTCACTCCGTTTGTCTGCTAAATTGGCCAGCTGTTaGGTCTTGTCTTTCTTAAAA +
Preference number: 5 (lower is better)
Translates to: ERAATVFLGDLESLRLSAKLASC*VLSFLK
Trigger: TTTTAAGAAAGACAAGACCAAACAGCTGGCCAATTT...AGCAGACAAACGGAGTGACTCAAGATCCCCCAGAAACACAGTGGCAGCTCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp ATGCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAAACTGGGCAGAGAAATaGGCCAGCTGTTTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: MQSLGKEPTHQSRLVISTNWAEK*ASCLVL
Trigger: CAAGACCAAACAGCTGGCCAATTTCTCTGCCCAGTT...TGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CAA 90 bp AGCAGAAGTGTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCATACACTATGCATGATGAAGTaGTCCCCTTTGTGTTCAATG +
Preference number: 5 (lower is better)
Translates to: SRSVHISPTAIRLLQSHTLCMMK*SPLCSM
Trigger: CATTGAACACAAAGGGGACAACTTCATCATGCATAG...TGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCACACTTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp CTCAGATCAGACTCTGATGCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGCTATGCATGATGAAGTaGTCCCCTTTGTGTTCAATG +
Preference number: 5 (lower is better)
Translates to: LRSDSDAIFREGTNPPVQLCMMK*SPLCSM
Trigger: CATTGAACACAAAGGGGACAACTTCATCATGCATAG...CTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGCATCAGAGTCTGATCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CAA 90 bp GTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAATCGATCACGTTCGTGTaGCTATGCATGATGAAGTTG +
Preference number: 5 (lower is better)
Translates to: VCRLSYVCSDTVSDAGAESITFV*LCMMKL
Trigger: CAACTTCATCATGCATAGCAACACGAACGTGATCGA...TTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp TCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCATCGATCACGTTCGTGTaGCTATGCATGATGAAGTTG +
Preference number: 5 (lower is better)
Translates to: SLGKEPTHQSRLVISTAASITFV*LCMMKL
Trigger: CAACTTCATCATGCATAGCAACACGAACGTGATCGA...TGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CAA 90 bp TTCACAAGTGAAGCCAGCAATGAGCCGTTAAAGGCCTCTGACTGCCTGTATACATCGATCACGTTCGTGTaGCTATGCATGATGAAGTTG +
Preference number: 5 (lower is better)
Translates to: FTSEASNEPLKASDCLYTSITFV*LCMMKL
Trigger: CAACTTCATCATGCATAGCAACACGAACGTGATCGA...TGTATACAGGCAGTCAGAGGCCTTTAACGGCTCATTGCTGGCTTCACTTGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp CACATGTTCCACTTACAGTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGACCTGGATCTCTCCTaGGCCTTGTTGGACCTCTCA +
Preference number: 5 (lower is better)
Translates to: HMFHLQCVDFPMCAQIQLDLDLS*ALLDLS
Trigger: TGAGAGGTCCAACAAGGCCAAGGAGAGATCCAGGTC...TAACTGTATCTGAGCACACATAGGAAAGTCTACACACTGTAAGTGGAACATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp CAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCACTAGAAGGTTCCTaGCTGCCACCAACTATTTCT +
Preference number: 5 (lower is better)
Translates to: QSLGKEPTHQSRLVISTAALEGS*LPPTIS
Trigger: AGAAATAGTTGGTGGCAGCAAGGAACCTTCTAGTGC...AGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CAA 90 bp TCCCTAAATTTGCTCTTTCTTACAACCACTAAAAATCATCTCCCACAGCCTAATAGGCTCCTGCTGACGTaGGGATGGAGGCATGGCTTG +
Preference number: 5 (lower is better)
Translates to: SLNLLFLTTTKNHLPQPNRLLLT*GWRHGL
Trigger: CAAGCCATGCCTCCATCCCAACGTCAGCAGGAGCCT...ATTAGGCTGTGGGAGATGATTTTTAGTGGTTGTAAGAAAGAGCAAATTTAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp CTTCCAATGTGGAAACAGTGGTGGTGGAATAGGTATCTAGGTGGGAGGAGGAGAACTAGTAACAGAAGCTaGCAAGCAGTTGGAAGGTTT +
Preference number: 5 (lower is better)
Translates to: LPMWKQWWWNRYLGGRRRTSNRS*QAVGRF
Trigger: AAACCTTCCAACTGCTTGCAAGCTTCTGTTACTAGT...TCTCCTCCTCCCACCTAGATACCTATTCCACCACCACTGTTTCCACATTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079195.6
CDS-3UTR CAA 90 bp GTGCACATCTCCCCTACTGCTATTCGGTTGCTACAGAGCCATACATGTGAAAAGCTTGTTCCAGAAGTGTaGCATGTTCTCCGCTTTGAA +
Preference number: 5 (lower is better)
Translates to: VHISPTAIRLLQSHTCEKLVPEV*HVLRFE
Trigger: TTCAAAGCGGAGAACATGCAACACTTCTGGAACAAG...CTTTTCACATGTATGGCTCTGTAGCAACCGAATAGCAGTAGGGGAGATGTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GCAGAAGGACAATCATACACTAGTAACAGAAGCTTGCAAGCAGTTGGAAGGTTTTTTCTTGGCTTGGGGTaGGAACACCTGGGAAACATG +
Preference number: 5 (lower is better)
Translates to: AEGQSYTSNRSLQAVGRFFLGLG*EHLGNM
Trigger: CATGTTTCCCAGGTGTTCCAACCCCAAGCCAAGAAA...AAACCTTCCAACTGCTTGCAAGCTTCTGTTACTAGTGTATGATTGTCCTTCTGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp TTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAATGAAGTTGTCCCCTTaGTGTTCAATGATGAAGCAG +
Preference number: 5 (lower is better)
Translates to: LGKEPTHQSRLVISTAAEMKLSP*CSMMKQ
Trigger: CTGCTTCATCATTGAACACAAAGGGGACAACTTCAT...TTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CAA 90 bp TGGGGTTATCACAGAAATGACAGGAACCCAACGAGAAACTGTAAACAAAGGTGGGCACTAGAAGGTTCCTaGCTGCCACCAACTATTTCT +
Preference number: 5 (lower is better)
Translates to: WGYHRNDRNPTRNCKQRWALEGS*LPPTIS
Trigger: AGAAATAGTTGGTGGCAGCAAGGAACCTTCTAGTGC...CCACCTTTGTTTACAGTTTCTCGTTGGGTTCCTGTCATTTCTGTGATAACCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp TGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGTGACGCGGGAGCAGAAGTGAATATTTCTTTCCTTTaGTCCAGGCTGCTGGGTTCT +
Preference number: 5 (lower is better)
Translates to: CRLSYVCSDTVSDAGAEVNISFL*SRLLGS
Trigger: AGAACCCAGCAGCCTGGACAAAAGGAAAGAAATATT...CACTTCTGCTCCCGCGTCACTAACTGTATCTGAGCACACATAGGAAAGTCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp AAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAACATTTGTGCTGTGTAGAGGTTaGAACAGTGTGTCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: KEPTHQSRLVISTAAETFVLCRG*NSVSLL
Trigger: CAGCAAAGACACACTGTTCAAACCTCTACACAGCAC...AAATGTTTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CAA 90 bp TTCACAAGTGAAGCCAGCAATGAGCCGTTAAAGGCCTCTGACTGCCTGTATACAGAAGCTTGCAAGCAGTaGGAAGGTTTCTGTAATTTC +
Preference number: 5 (lower is better)
Translates to: FTSEASNEPLKASDCLYTEACKQ*EGFCNF
Trigger: GAAATTACAGAAACCTTCCAACTGCTTGCAAGCTTC...TGTATACAGGCAGTCAGAGGCCTTTAACGGCTCATTGCTGGCTTCACTTGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079195.6
CDS-3UTR CAA 90 bp TTGGTCTCAGATCAGACTCTGATGCAATCTTTAGGGAAGGAACCAACCCACCAGTTGAGACCGAATTTTTaGGACTGCTTTTCACCATCT +
Preference number: 5 (lower is better)
Translates to: LVSDQTLMQSLGKEPTHQLRPNF*DCFSPS
Trigger: AGATGGTGAAAAGCAGTCCAAAAAATTCGGTCTCAA...CTGGTGGGTTGGTTCCTTCCCTAAAGATTGCATCAGAGTCTGATCTGAGACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CAA 90 bp CACATGTTCCACTTACAGTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTAAACTGGGCAGAGAAATaGGCCAGCTGTTTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: HMFHLQCVDFPMCAQIQLNWAEK*ASCLVL
Trigger: CAAGACCAAACAGCTGGCCAATTTCTCTGCCCAGTT...TAACTGTATCTGAGCACACATAGGAAAGTCTACACACTGTAAGTGGAACATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp TGGTATATCATCTTTAAAGCCCATCTTGCTATGCTAATGGCTGCTGGTCTAAGGGTGCTGTGTAGAGGTTaGAACAGTGTGTCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: WYIIFKAHLAMLMAAGLRVLCRG*NSVSLL
Trigger: CAGCAAAGACACACTGTTCAAACCTCTACACAGCAC...CCTTAGACCAGCAGCCATTAGCATAGCAAGATGGGCTTTAAAGATGATATACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp TTCTTCTTTCCTATTGGTTTTCCCTATTGGGTGTGCACACATCCTATTTTTGCAGTAGAATTTCTTGGCTaGGGGTTGGAACACCTGGGA +
Preference number: 5 (lower is better)
Translates to: FFFPIGFPYWVCTHPIFAVEFLG*GLEHLG
Trigger: TCCCAGGTGTTCCAACCCCAAGCCAAGAAATTCTAC...TGCAAAAATAGGATGTGTGCACACCCAATAGGGAAAACCAATAGGAAAGAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GCAATCTTTAGGGAAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCAAATTGGCCAGCTGTTaGGTCTTGTCTTTCTTAAAA +
Preference number: 5 (lower is better)
Translates to: AIFREGTNPPVQISDLYSKLASC*VLSFLK
Trigger: TTTTAAGAAAGACAAGACCAAACAGCTGGCCAATTT...GCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTTCCCTAAAGATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CAA 90 bp GTGCAAAATGCCGACAGATGTGTTGACCCTTTAAAGTTGAATGCCTCACAGAGAATGAAGTTGTCCCCTTaGTGTTCAATGATGAAGCAG +
Preference number: 5 (lower is better)
Translates to: VQNADRCVDPLKLNASQRMKLSP*CSMMKQ
Trigger: CTGCTTCATCATTGAACACAAAGGGGACAACTTCAT...TCTCTGTGAGGCATTCAACTTTAAAGGGTCAACACATCTGTCGGCATTTTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GTCATTTTCCTGGGATTAGATCTAACCCTGGTGCAGATGGATTTCCAGTACCTACTATGCATGATGAAGTaGTCCCCTTTGTGTTCAATG +
Preference number: 5 (lower is better)
Translates to: VIFLGLDLTLVQMDFQYLLCMMK*SPLCSM
Trigger: CATTGAACACAAAGGGGACAACTTCATCATGCATAG...TAGGTACTGGAAATCCATCTGCACCAGGGTTAGATCTAATCCCAGGAAAATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GAGCTTTGCCGAATTCTAAATTTTGCAACCATTAAGCCTGTGAACAACAATAATGACCTGGATCTCTCCTaGGCCTTGTTGGACCTCTCA +
Preference number: 5 (lower is better)
Translates to: ELCRILNFATIKPVNNNNDLDLS*ALLDLS
Trigger: TGAGAGGTCCAACAAGGCCAAGGAGAGATCCAGGTC...ATTATTGTTGTTCACAGGCTTAATGGTTGCAAAATTTAGAATTCGGCAAAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp CACATGTTCCACTTACAGTGTGTAGACTTTCCTATGTGTGCTCAGATACAGTTAGCACTAGAAGGTTCCTaGCTGCCACCAACTATTTCT +
Preference number: 5 (lower is better)
Translates to: HMFHLQCVDFPMCAQIQLALEGS*LPPTIS
Trigger: AGAAATAGTTGGTGGCAGCAAGGAACCTTCTAGTGC...TAACTGTATCTGAGCACACATAGGAAAGTCTACACACTGTAAGTGGAACATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp AAGGAACCAACCCACCAGTCCAGATTAGTGATCTCTACAGCTGCAGAAACATTTAATATTTCTTTCCTTTaGTCCAGGCTGCTGGGTTCT +
Preference number: 5 (lower is better)
Translates to: KEPTHQSRLVISTAAETFNISFL*SRLLGS
Trigger: AGAACCCAGCAGCCTGGACAAAAGGAAAGAAATATT...AAATGTTTCTGCAGCTGTAGAGATCACTAATCTGGACTGGTGGGTTGGTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210030.2
CDS-3UTR CAA 90 bp TGGGGTTATCACAGAAATGACAGGAACCCAACGAGAAACTGTAAACAAAGGTGGAATATTTCTTTCCTTTaGTCCAGGCTGCTGGGTTCT +
Preference number: 5 (lower is better)
Translates to: WGYHRNDRNPTRNCKQRWNISFL*SRLLGS
Trigger: AGAACCCAGCAGCCTGGACAAAAGGAAAGAAATATT...CCACCTTTGTTTACAGTTTCTCGTTGGGTTCCTGTCATTTCTGTGATAACCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp TGTACTAAGGATGACAAGGAATCATCATTTACAATATGGTACACGGACACGATAAACTGGGCAGAGAAATaGGCCAGCTGTTTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: CTKDDKESSFTIWYTDTINWAEK*ASCLVL
Trigger: CAAGACCAAACAGCTGGCCAATTTCTCTGCCCAGTT...TATCGTGTCCGTGTACCATATTGTAAATGATGATTCCTTGTCATCCTTAGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp CGCTCCCTAAATTTGCTCTTTCTTACAACCACTAAAAATCATCTCCCACAGCCTTTGAGACCGAATTTTTaGGACTGCTTTTCACCATCT +
Preference number: 5 (lower is better)
Translates to: RSLNLLFLTTTKNHLPQPLRPNF*DCFSPS
Trigger: AGATGGTGAAAAGCAGTCCAAAAAATTCGGTCTCAA...AGGCTGTGGGAGATGATTTTTAGTGGTTGTAAGAAAGAGCAAATTTAGGGAGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp TCCCTAAATTTGCTCTTTCTTACAACCACTAAAAATCATCTCCCACAGCCTAATGTGCTGTGTAGAGGTTaGAACAGTGTGTCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: SLNLLFLTTTKNHLPQPNVLCRG*NSVSLL
Trigger: CAGCAAAGACACACTGTTCAAACCTCTACACAGCAC...ATTAGGCTGTGGGAGATGATTTTTAGTGGTTGTAAGAAAGAGCAAATTTAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GCAGAAGGACAATCATACACTAGTAACAGAAGCTTGCAAGCAGTTGGAAGGTTTAAATTGGCCAGCTGTTaGGTCTTGTCTTTCTTAAAA +
Preference number: 5 (lower is better)
Translates to: AEGQSYTSNRSLQAVGRFKLASC*VLSFLK
Trigger: TTTTAAGAAAGACAAGACCAAACAGCTGGCCAATTT...AAACCTTCCAACTGCTTGCAAGCTTCTGTTACTAGTGTATGATTGTCCTTCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000110367.10
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp CATCTTGCTATGCTAATGGCTGCTGGTCTAAGGGAGGTTCTTTTGTTTATTTATCTATGCATGATGAAGTaGTCCCCTTTGTGTTCAATG +
Preference number: 5 (lower is better)
Translates to: HLAMLMAAGLREVLLFIYLCMMK*SPLCSM
Trigger: CATTGAACACAAAGGGGACAACTTCATCATGCATAG...ATAAATAAACAAAAGAACCTCCCTTAGACCAGCAGCCATTAGCATAGCAAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GTTATCACAGAAATGACAGGAACCCAACGAGAAACTGTAAACAAAGGTGGATGTAAATTGGCCAGCTGTTaGGTCTTGTCTTTCTTAAAA +
Preference number: 5 (lower is better)
Translates to: VITEMTGTQRETVNKGGCKLASC*VLSFLK
Trigger: TTTTAAGAAAGACAAGACCAAACAGCTGGCCAATTT...ACATCCACCTTTGTTTACAGTTTCTCGTTGGGTTCCTGTCATTTCTGTGATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp TCCCTAAATTTGCTCTTTCTTACAACCACTAAAAATCATCTCCCACAGCCTAATAATATTTCTTTCCTTTaGTCCAGGCTGCTGGGTTCT +
Preference number: 5 (lower is better)
Translates to: SLNLLFLTTTKNHLPQPNNISFL*SRLLGS
Trigger: AGAACCCAGCAGCCTGGACAAAAGGAAAGAAATATT...ATTAGGCTGTGGGAGATGATTTTTAGTGGTTGTAAGAAAGAGCAAATTTAGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS-3UTR CAA 90 bp GAGCTTTGCCGAATTCTAAATTTTGCAACCATTAAGCCTGTGAACAACAATAATTTGAGACCGAATTTTTaGGACTGCTTTTCACCATCT +
Preference number: 5 (lower is better)
Translates to: ELCRILNFATIKPVNNNNLRPNF*DCFSPS
Trigger: AGATGGTGAAAAGCAGTCCAAAAAATTCGGTCTCAA...ATTATTGTTGTTCACAGGCTTAATGGTTGCAAAATTTAGAATTCGGCAAAGCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211882.2
CDS GCA 72 bp CGGGGGCGAGGGCTGAACCGTCCCGGGCTTCTCCTCTaGGGAGCTGTCGGCCGGGCCCAGGACGATGGCCAG +
Preference number: 6 (lower is better)
Translates to: RGRGLNRPGLLL*GAVGRAQDDGQ
Trigger: CTGGCCATCGTCCTGGGCCCGGCCGACAGCTCCGCAGAGGAGAAGCCCGGGACGGTTCAGCCCTCGCCCCCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS CAA 72 bp CTCGTACCCGATGTGGTGTCGGGCGAGCTGCCGGGGTaGGGTGGGAACCGGGGGCGAGGGCTGAACCGTCCC +
Preference number: 6 (lower is better)
Translates to: LVPDVVSGELPG*GGNRGRGLNRP
Trigger: GGGACGGTTCAGCCCTCGCCCCCGGTTCCCACCCAACCCCGGCAGCTCGCCCGACACCACATCGGGTACGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS CAA 90 bp TGCGAAGATCTCGTACCCGATGTGGTGTCGGGCGAGCTGCCGGGGTaGGGTGGGAACCGGGGGCGAGGGCTGAACCGTCCCGGGCTTCTC +
Preference number: 6 (lower is better)
Translates to: CEDLVPDVVSGELPG*GGNRGRGLNRPGLL
Trigger: GAGAAGCCCGGGACGGTTCAGCCCTCGCCCCCGGTTCCCACCCAACCCCGGCAGCTCGCCCGACACCACATCGGGTACGAGATCTTCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS GCA 72 bp CGGGGAAGCGCTTGTGCAGGCGGTAGTCCTTCTCGCTaGGGGACCTCATGCGGTCCGAGGCCCGGTCCGAGA +
Preference number: 6 (lower is better)
Translates to: RGSACAGGSPSR*GTSCGPRPGPR
Trigger: TCTCGGACCGGGCCTCGGACCGCATGAGGTCCCGCAGCGAGAAGGACTACCGCCTGCACAAGCGCTTCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000079195.6
ENSMUST00000211737.2
CDS GCA 72 bp GCCCTGCGTGTCCAGCCCTCCCGCAGCGCCTCTAGATaGTCCTCCTTGCCCTGGATCAGCAAGACCTGCTCG +
Preference number: 6 (lower is better)
Translates to: ALRVQPSRSASR*SSLPWISKTCS
Trigger: CGAGCAGGTCTTGCTGATCCAGGGCAAGGAGGAGCATCTAGAGGCGCTGCGGGAGGGCTGGACACGCAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS CCA 72 bp TCTCCTCTGCGGAGCTGTCGGCCGGGCCCAGGACGATaGCCAGAGAGTGCGGCGCGATCTGCAGAAACTTCT +
Preference number: 6 (lower is better)
Translates to: SPLRSCRPGPGR*PESAARSAETS
Trigger: AGAAGTTTCTGCAGATCGCGCCGCACTCTCTGGCCATCGTCCTGGGCCCGGCCGACAGCTCCGCAGAGGAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS GCA 72 bp TCCAGCCCTCCCGCAGCGCCTCTAGATGCTCCTCCTTaGCCTGGATCAGCAAGACCTGCTCGTCGATCCAGC +
Preference number: 6 (lower is better)
Translates to: SSPPAAPLDAPP*PGSARPARRSS
Trigger: GCTGGATCGACGAGCAGGTCTTGCTGATCCAGGGCAAGGAGGAGCATCTAGAGGCGCTGCGGGAGGGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS CCA 72 bp CCCTCCCGCAGCGCCTCTAGATGCTCCTCCTTGCCCTaGATCAGCAAGACCTGCTCGTCGATCCAGCCTAGG +
Preference number: 6 (lower is better)
Translates to: PSRSASRCSSLP*ISKTCSSIQPR
Trigger: CCTAGGCTGGATCGACGAGCAGGTCTTGCTGATCCAGGGCAAGGAGGAGCATCTAGAGGCGCTGCGGGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS CAA 72 bp GTCCAGCCCTCCCGCAGCGCCTCTAGATGCTCCTCCTaGCCCTGGATCAGCAAGACCTGCTCGTCGATCCAG +
Preference number: 6 (lower is better)
Translates to: VQPSRSASRCSS*PWISKTCSSIQ
Trigger: CTGGATCGACGAGCAGGTCTTGCTGATCCAGGGCAAGGAGGAGCATCTAGAGGCGCTGCGGGAGGGCTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS CAA 90 bp GCCCTGCGTGTCCAGCCCTCCCGCAGCGCCTCTAGATGCTCCTCCTaGCCCTGGATCAGCAAGACCTGCTCGTCGATCCAGCCTAGGAAA +
Preference number: 6 (lower is better)
Translates to: ALRVQPSRSASRCSS*PWISKTCSSIQPRK
Trigger: TTTCCTAGGCTGGATCGACGAGCAGGTCTTGCTGATCCAGGGCAAGGAGGAGCATCTAGAGGCGCTGCGGGAGGGCTGGACACGCAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS GCA 72 bp CGCCTCCTGGGTGACAGGCTTTCTCGCAGAGTTCATTaGAGAGATGGCCAAGCAAAGGATTTCCCCGAGTGG +
Preference number: 6 (lower is better)
Translates to: RLLGDRLSRRVH*RDGQAKDFPEW
Trigger: CCACTCGGGGAAATCCTTTGCTTGGCCATCTCTGCAATGAACTCTGCGAGAAAGCCTGTCACCCAGGAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000209337.2
ENSMUST00000210030.2
ENSMUST00000210153.2
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS TCA 72 bp AGCAGGATTCTGACGGCGGTTGCTTTCAACAATGCTTaGTGTGTTGGAAGCCAGGCTCTCCCGAGTGCGTGG +
Preference number: 6 (lower is better)
Translates to: SRILTAVAFNNA*CVGSQALPSAW
Trigger: CCACGCACTCGGGAGAGCCTGGCTTCCAACACATCAAGCATTGTTGAAAGCAACCGCCGTCAGAATCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079195.6
CDS CAA 90 bp GCGGCTGTGACCTTCTTGTTCCAGAAGTGTTGCATGTTCTCCGCTTaGAAATCTGCGAAGATCTCGTACCCGATGTGGTGTCGGGCGAGC +
Preference number: 6 (lower is better)
Translates to: AAVTFLFQKCCMFSA*KSAKISYPMWCRAS
Trigger: GCTCGCCCGACACCACATCGGGTACGAGATCTTCGCAGATTTCAAAGCGGAGAACATGCAACACTTCTGGAACAAGAAGGTCACAGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS TCA 72 bp AACATGTGGTCAGGTGTTCCATCAGCGCCTCCTGGGTaGCAGGCTTTCTCGCAGAGTTCATTGCAGAGATGG +
Preference number: 6 (lower is better)
Translates to: NMWSGVPSAPPG*QAFSQSSLQRW
Trigger: CCATCTCTGCAATGAACTCTGCGAGAAAGCCTGTCACCCAGGAGGCGCTGATGGAACACCTGACCACATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000079195.6
ENSMUST00000110367.10
ENSMUST00000209337.2
ENSMUST00000210030.2
ENSMUST00000210153.2
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS GCA 72 bp GTTCCAGAAGTGTTGCATGTTCTCCGCTTTGAAATCTaGGAAGATCTCGTACCCGATGTGGTGTCGGGCGAG +
Preference number: 6 (lower is better)
Translates to: VPEVLHVLRFEI*EDLVPDVVSGE
Trigger: CTCGCCCGACACCACATCGGGTACGAGATCTTCGCAGATTTCAAAGCGGAGAACATGCAACACTTCTGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS GCA 72 bp GCCACCGCGGCTGTGACCTTCTTGTTCCAGAAGTGTTaGATGTTCTCCGCTTTGAAATCTGCGAAGATCTCG +
Preference number: 6 (lower is better)
Translates to: ATAAVTFLFQKC*MFSALKSAKIS
Trigger: CGAGATCTTCGCAGATTTCAAAGCGGAGAACATGCAACACTTCTGGAACAAGAAGGTCACAGCCGCGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS CAA 72 bp GGCCACCGCGGCTGTGACCTTCTTGTTCCAGAAGTGTaGCATGTTCTCCGCTTTGAAATCTGCGAAGATCTC +
Preference number: 6 (lower is better)
Translates to: GHRGCDLLVPEV*HVLRFEICEDL
Trigger: GAGATCTTCGCAGATTTCAAAGCGGAGAACATGCAACACTTCTGGAACAAGAAGGTCACAGCCGCGGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS CAA 90 bp AAAAGTCTCGGCCACCGCGGCTGTGACCTTCTTGTTCCAGAAGTGTaGCATGTTCTCCGCTTTGAAATCTGCGAAGATCTCGTACCCGAT +
Preference number: 6 (lower is better)
Translates to: KSLGHRGCDLLVPEV*HVLRFEICEDLVPD
Trigger: ATCGGGTACGAGATCTTCGCAGATTTCAAAGCGGAGAACATGCAACACTTCTGGAACAAGAAGGTCACAGCCGCGGTGGCCGAGACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS TCA 72 bp CCTTCTTGTTCCAGAAGTGTTGCATGTTCTCCGCTTTaGAATCTGCGAAGATCTCGTACCCGATGTGGTGTC +
Preference number: 6 (lower is better)
Translates to: PSCSRSVACSPL*NLRRSRTRCGV
Trigger: GACACCACATCGGGTACGAGATCTTCGCAGATTTCAAAGCGGAGAACATGCAACACTTCTGGAACAAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2
CDS CCA 72 bp CATTGCAGAGATGGCCAAGCAAAGGATTTCCCCGAGTaGAATAAACTGAGACTGACTGATGGGGGACATACT +
Preference number: 6 (lower is better)
Translates to: HCRDGQAKDFPE*NKLRLTDGGHT
Trigger: AGTATGTCCCCCATCAGTCAGTCTCAGTTTATTCCACTCGGGGAAATCCTTTGCTTGGCCATCTCTGCAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000079195.6
ENSMUST00000211737.2
ENSMUST00000211882.2
CDS CAA 72 bp ACCTTCTTGTTCCAGAAGTGTTGCATGTTCTCCGCTTaGAAATCTGCGAAGATCTCGTACCCGATGTGGTGT +
Preference number: 6 (lower is better)
Translates to: TFLFQKCCMFSA*KSAKISYPMWC
Trigger: ACACCACATCGGGTACGAGATCTTCGCAGATTTCAAAGCGGAGAACATGCAACACTTCTGGAACAAGAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211882.2