Pregenerated sensors for STOML2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028455Ensembl transcript IDs: ENSMUST00000030169.15, ENSMUST00000135660.8, ENSMUST00000136326.8, ENSMUST00000138030.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCCTTGTCACGCGTGGAGAATCAACTCCTCACACCGACCTGGACTaGAGGGTGGAAGTGGACGGCCAAAGACGACCCGAGTGGCTTTCC | + |
|
Preference number: 1 (lower is better) Translates to: ILVTRGESTPHTDLD*RVEVDGQRRPEWLS Trigger: GGAAAGCCACTCGGGTCGTCTTTGGCCGTCCACTTCCACCCTTCAGTCCAGGTCGGTGTGAGGAGTTGATTCTCCACGCGTGACAAGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| 3UTR-3UTR TCA 90 bp | AAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTGGCAGCACACCGACCTGGACTaGAGGGTGGAAGTGGACGGC | + |
|
Preference number: 2 (lower is better) Translates to: KLSFPVCPQAPAPLCSWQHTDLD*RVEVDG Trigger: GCCGTCCACTTCCACCCTTCAGTCCAGGTCGGTGTG...CTGCCAGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACAGCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| 3UTR-3UTR CCA 90 bp | AGGGCAAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTACTGAAGGGTGGAAGTaGACGGCCAAAGACGACCCG | + |
|
Preference number: 2 (lower is better) Translates to: RASCPFPCVPKPLHHCAATEGWK*TAKDDP Trigger: CGGGTCGTCTTTGGCCGTCCACTTCCACCCTTCAGT...AGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACAGCTTGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| 3UTR-3UTR TCA 90 bp | AGGGCAAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTTCACTTCACATGAAGTaGATCCTTGTCACGCGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: RASCPFPCVPKPLHHCAASLHMK*ILVTRG Trigger: TCCACGCGTGACAAGGATTCACTTCATGTGAAGTGA...AGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACAGCTTGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| 3UTR-3UTR GCA 90 bp | GCAAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTGGCGGACAGTTTCCCATTTaGCACTGGTCACTTTATTAC | + |
|
Preference number: 2 (lower is better) Translates to: ASCPFPCVPKPLHHCAAGGQFPI*HWSLYY Trigger: GTAATAAAGTGACCAGTGGCAAATGGGAAACTGTCC...GCCAGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACAGCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| 3UTR-3UTR CCA 90 bp | AGGGCAAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTATAAAAACTAAAATTTaGCCGGGAGGCTGGAACCAG | + |
|
Preference number: 2 (lower is better) Translates to: RASCPFPCVPKPLHHCAAIKTKI*PGGWNQ Trigger: CTGGTTCCAGCCTCCCGGCCAAATTTTAGTTTTTAT...AGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACAGCTTGCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| 3UTR-3UTR CCA 90 bp | CCCCTGCACCACTGTGCAGCTGGCAGTTCAGCAGACCATGCCTCAATCCCCGTATTTCCCATTTGCCACTaGTCACTTTATTACATGATT | + |
|
Preference number: 2 (lower is better) Translates to: PLHHCAAGSSADHASIPVFPICH*SLYYMI Trigger: AATCATGTAATAAAGTGACCAGTGGCAAATGGGAAA...TACGGGGATTGAGGCATGGTCTGCTGAACTGCCAGCTGCACAGTGGTGCAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| 3UTR GCA 72 bp | GGGCAAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTaGACCACTGTGCAGCTGGCAGTTCAGCAGACCATG | + |
|
Preference number: 3 (lower is better) Translates to: GQAVLSRVSPSP*TTVQLAVQQTM Trigger: CATGGTCTGCTGAACTGCCAGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACAGCTTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| 3UTR TCA 72 bp | ACGCGTGGAGAATCAACTCCTCACACCGACCTGGACTaGAGGGTGGAAGTGGACGGCCAAAGACGACCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: TRGESTPHTDLD*RVEVDGQRRPE Trigger: CTCGGGTCGTCTTTGGCCGTCCACTTCCACCCTTCAGTCCAGGTCGGTGTGAGGAGTTGATTCTCCACGCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| 3UTR GCA 72 bp | CCTGCACCACTGTGCAGCTGGCAGTTCAGCAGACCATaGCTCAATCCCCGTACAGCCGAGGTTTCTCTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: PAPLCSWQFSRP*LNPRTAEVSLD Trigger: GTCAAGAGAAACCTCGGCTGTACGGGGATTGAGGCATGGTCTGCTGAACTGCCAGCTGCACAGTGGTGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| 3UTR-3UTR CAA 90 bp | GACCGCCATACCATAAGGGCAAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGAGGACAGTTTCCCATTaGCCACTGGTCACTTTATTA | + |
|
Preference number: 3 (lower is better) Translates to: DRHTIRASCPFPCVPKPLRTVSH*PLVTLL Trigger: TAATAAAGTGACCAGTGGCAAATGGGAAACTGTCCT...CAGGGGCTTGGGGACACACGGGAAAGGACAGCTTGCCCTTATGGTATGGCGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| 3UTR CCA 72 bp | GACTTCACTTCACATGAAGTGAATCCTTGTCACGCGTaGAGAATCAACTCCTCACACCGACCTGGACTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: DFTSHEVNPCHA*RINSSHRPGLK Trigger: CTTCAGTCCAGGTCGGTGTGAGGAGTTGATTCTCCACGCGTGACAAGGATTCACTTCATGTGAAGTGAAGTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR GCA 90 bp | AGGGCAAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTGCAAAAGGGCTCCAGTaGCCCGCGCCGCGCGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RASCPFPCVPKPLHHCAAAKGLQ*PAPRAP Trigger: TGGCGCGCGCGGCGCGGGGCACTGGAGCCCTTTTGC...AGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACAGCTTGCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR CCA 90 bp | AGGGCAAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTCTGGGCTCCGGGCACTaGGGCTTTGGTGAGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RASCPFPCVPKPLHHCAALGSGH*GFGESP Trigger: GGGGCTCTCACCAAAGCCCCAGTGCCCGGAGCCCAG...AGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACAGCTTGCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR CCA 90 bp | CAAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTGGCACTCTGGCTGGAGTTCTaGGCTCCGGGCACTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QAVLSRVSPSPCTTVQLALWLEF*APGTGA Trigger: AGCCCCAGTGCCCGGAGCCCAGAACTCCAGCCAGAG...TGCCAGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACAGCTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR CCA 90 bp | CAAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTGGCACGGACTCTAGAACTGTaGCCCGCTTCCGGCGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QAVLSRVSPSPCTTVQLARTLEL*PASGAL Trigger: CAGAGCGCCGGAAGCGGGCCACAGTTCTAGAGTCCG...TGCCAGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACAGCTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR CCA 90 bp | GCAAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTGGCCTCTTCTGCTCTGGCTaGAGTTCTGGGCTCCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASCPFPCVPKPLHHCAAGLFCSG*SSGLRA Trigger: TGCCCGGAGCCCAGAACTCCAGCCAGAGCAGAAGAG...GCCAGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACAGCTTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR CCA 90 bp | AAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTGGCAGGGTTCCAGGATCCGGTaGAATCGGCCCATTCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KLSFPVCPQAPAPLCSWQGSRIR*NRPIRS Trigger: GGAGCGAATGGGCCGATTCCACCGGATCCTGGAACC...CTGCCAGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACAGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR TCA 90 bp | TGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTGGCAGTTCAGCACTGGGGCTTTGGTaGGAGCCCCATAGACACCCA | + |
|
Preference number: 4 (lower is better) Translates to: CPFPCVPKPLHHCAAGSSALGLW*EPHRHP Trigger: TGGGTGTCTATGGGGCTCTCACCAAAGCCCCAGTGC...TGAACTGCCAGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR GCA 90 bp | AGGGCAAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTCCTGGACATCTCTTCTaGTCTGGCTGGAGTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RASCPFPCVPKPLHHCAAPGHLF*SGWSSG Trigger: CCCAGAACTCCAGCCAGAGCAGAAGAGATGTCCAGG...AGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACAGCTTGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR CCA 90 bp | TGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTGGCAGTTCATGGCCAGAACTGCACTaGCTTCTCCTGCCGCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CPFPCVPKPLHHCAAGSSWPELH*LLLPPD Trigger: ATCAGGCGGCAGGAGAAGCCAGTGCAGTTCTGGCCA...TGAACTGCCAGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR TCA 90 bp | AAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTGGCAGAGTCTGCAGCCTGGTTaGTGGCATCCACAATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KLSFPVCPQAPAPLCSWQSLQPG*WHPQCW Trigger: CCAACATTGTGGATGCCATCAACCAGGCTGCAGACT...CTGCCAGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACAGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR TCA 90 bp | CCTGCACCACTGTGCAGCTGGCAGTTCAGCAGACCATGCCTCAATCCCCGTACAACTGCTCAGCCACAGTaGGCGAAGCTGCTGCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: PAPLCSWQFSRPCLNPRTTAQPQ*AKLLHL Trigger: GAGATGCAGCAGCTTCGCTCACTGTGGCTGAGCAGT...TGTACGGGGATTGAGGCATGGTCTGCTGAACTGCCAGCTGCACAGTGGTGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR GCA 90 bp | TGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTGGCAGTTCAGATACCCCAGCAGTCTaGAGCCTGGTTGATGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: CPFPCVPKPLHHCAAGSSDTPAV*SLVDGI Trigger: GATGCCATCAACCAGGCTGCAGACTGCTGGGGTATC...TGAACTGCCAGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR GCA 90 bp | GCAAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTGGCAATGCGCTGACATACTaGTCAGCCACAGTGAGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: ASCPFPCVPKPLHHCAAGNALTY*SATVSE Trigger: TTCGCTCACTGTGGCTGAGCAGTATGTCAGCGCATT...GCCAGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACAGCTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR CCA 90 bp | CAAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTGGCACAGCAGTCTGCAGCCTaGTTGATGGCATCCACAATG | + |
|
Preference number: 4 (lower is better) Translates to: QAVLSRVSPSPCTTVQLAQQSAA*LMASTM Trigger: CATTGTGGATGCCATCAACCAGGCTGCAGACTGCTG...TGCCAGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACAGCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR CCA 90 bp | CAAGCCCCTGCACCACTGTGCAGCTGGCAGTTCAGCAGACCATGCCTCAATCCCTCGGAGGCCAGAATCTaGGCCTGTTTCTTCCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QAPAPLCSWQFSRPCLNPSEARI*ACFFPS Trigger: AGAGGGGAAGAAACAGGCCCAGATTCTGGCCTCCGA...GGGATTGAGGCATGGTCTGCTGAACTGCCAGCTGCACAGTGGTGCAGGGGCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR TCA 90 bp | CAAGCCCCTGCACCACTGTGCAGCTGGCAGTTCAGCAGACCATGCCTCAATCCCGTCAAGAGTTACGGCTaGCTGCTCAGGCACGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QAPAPLCSWQFSRPCLNPVKSYG*LLRHVD Trigger: ATCAACGTGCCTGAGCAGTCAGCCGTAACTCTTGAC...GGGATTGAGGCATGGTCTGCTGAACTGCCAGCTGCACAGTGGTGCAGGGGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR TCA 90 bp | CAAGCCCCTGCACCACTGTGCAGCTGGCAGTTCAGCAGACCATGCCTCAATCCCGCACATGGATGTCCTTaGTCTCGTATCGCAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: QAPAPLCSWQFSRPCLNPAHGCP*SRIAGI Trigger: GATGCCTGCGATACGAGATCAAGGACATCCATGTGC...GGGATTGAGGCATGGTCTGCTGAACTGCCAGCTGCACAGTGGTGCAGGGGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR TCA 90 bp | AAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTGGCAGGCTTCTCCTGCCGCCTaGTTTATCTGTTCAGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KLSFPVCPQAPAPLCSWQASPAA*FICSAF Trigger: AAAGGCTGAACAGATAAATCAGGCGGCAGGAGAAGC...CTGCCAGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACAGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR TCA 90 bp | CAAGCCCCTGCACCACTGTGCAGCTGGCAGTTCAGCAGACCATGCCTCAATCCCGCATCTCCATTATGTTaGGTCAGAGCCCCAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QAPAPLCSWQFSRPCLNPASPLC*VRAPAR Trigger: TCTGGCTGGGGCTCTGACTCAACATAATGGAGATGC...GGGATTGAGGCATGGTCTGCTGAACTGCCAGCTGCACAGTGGTGCAGGGGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR GCA 90 bp | AAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTGGCAGCGCTCTGCCTCTACCTaGATCTGCATAGACTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KLSFPVCPQAPAPLCSWQRSAST*ICIDSF Trigger: GAAAGAGTCTATGCAGATGCAGGTAGAGGCAGAGCG...CTGCCAGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACAGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR GCA 90 bp | CCCCTGCACCACTGTGCAGCTGGCAGTTCAGCAGACCATGCCTCAATCCCCGTAGGCCAGTTTGGAGAATaGGCTGACATACTGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLHHCAAGSSADHASIPVGQFGE*ADILLS Trigger: GCTGAGCAGTATGTCAGCGCATTCTCCAAACTGGCC...TACGGGGATTGAGGCATGGTCTGCTGAACTGCCAGCTGCACAGTGGTGCAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR CCA 90 bp | AGGGCAAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTGGTGACAGCATACTCTaGGTCTTCCACACCGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: RASCPFPCVPKPLHHCAAGDSIL*VFHTVT Trigger: AGTTACGGTGTGGAAGACCCAGAGTATGCTGTCACC...AGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACAGCTTGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR CCA 90 bp | GCAAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTGGCACTCGAGGTGGCACATaGATGTCCTTGATCTCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: ASCPFPCVPKPLHHCAAGTRGGT*MSLISY Trigger: ATACGAGATCAAGGACATCCATGTGCCACCTCGAGT...GCCAGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACAGCTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR CCA 90 bp | AGGGCAAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTCTGTGTTGGAATCCTTaGCCAGTTTGGAGAATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RASCPFPCVPKPLHHCAALCWNP*PVWRMR Trigger: GCGCATTCTCCAAACTGGCCAAGGATTCCAACACAG...AGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACAGCTTGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR CCA 90 bp | GACCGCCATACCATAAGGGCAAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCTCGTGTCTGTAGCCTaGACATCTCTTCTGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DRHTIRASCPFPCVPKPLLVSVA*TSLLLW Trigger: CCAGAGCAGAAGAGATGTCCAGGCTACAGACACGAG...CAGGGGCTTGGGGACACACGGGAAAGGACAGCTTGCCCTTATGGTATGGCGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR TCA 90 bp | CAAGCCCCTGCACCACTGTGCAGCTGGCAGTTCAGCAGACCATGCCTCAATCCCGAGTTTGCCAAGCTCTaGTCTCATAGTCGTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QAPAPLCSWQFSRPCLNPEFAKL*SHSRLS Trigger: GCTCAGACGACTATGAGATCAGAGCTTGGCAAACTC...GGGATTGAGGCATGGTCTGCTGAACTGCCAGCTGCACAGTGGTGCAGGGGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR GCA 90 bp | CAAGCCCCTGCACCACTGTGCAGCTGGCAGTTCAGCAGACCATGCCTCAATCCCCTGTTCAGCCTTTTCTaGTTCGGAGGCCAGAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: QAPAPLCSWQFSRPCLNPLFSLF*FGGQNL Trigger: CAGATTCTGGCCTCCGAAGCAGAAAAGGCTGAACAG...GGGATTGAGGCATGGTCTGCTGAACTGCCAGCTGCACAGTGGTGCAGGGGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR GCA 90 bp | CAAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTGGCACACAGTGAGCGAAGCTaGTGCATCTCCATTATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QAVLSRVSPSPCTTVQLAHSERS*CISIML Trigger: CAACATAATGGAGATGCAGCAGCTTCGCTCACTGTG...TGCCAGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACAGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR CCA 90 bp | CAAGCCCCTGCACCACTGTGCAGCTGGCAGTTCAGCAGACCATGCCTCAATCCCTGGCATCCACAATGTTaGCATTCAGGGACTCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: QAPAPLCSWQFSRPCLNPWHPQC*HSGTHA Trigger: AGCGTGAGTCCCTGAATGCCAACATTGTGGATGCCA...GGGATTGAGGCATGGTCTGCTGAACTGCCAGCTGCACAGTGGTGCAGGGGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR GCA 90 bp | TGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTGGCAGTTCAAGAGTTACGGCTGACTaGTCAGGCACGTTGATAACA | + |
|
Preference number: 4 (lower is better) Translates to: CPFPCVPKPLHHCAAGSSRVTAD*SGTLIT Trigger: TGTTATCAACGTGCCTGAGCAGTCAGCCGTAACTCT...TGAACTGCCAGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR GCA 90 bp | CAAGCCCCTGCACCACTGTGCAGCTGGCAGTTCAGCAGACCATGCCTCAATCCCGCCTCTACCTGCATCTaGATAGACTCTTTCACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: QAPAPLCSWQFSRPCLNPASTCI*IDSFTR Trigger: TCGAGTGAAAGAGTCTATGCAGATGCAGGTAGAGGC...GGGATTGAGGCATGGTCTGCTGAACTGCCAGCTGCACAGTGGTGCAGGGGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR CCA 90 bp | CCTGCACCACTGTGCAGCTGGCAGTTCAGCAGACCATGCCTCAATCCCCGTACAGCAGTAGCACTGTGTTaGAATCCTTGGCCAGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PAPLCSWQFSRPCLNPRTAVALC*NPWPVW Trigger: CCAAACTGGCCAAGGATTCCAACACAGTGCTACTGC...TGTACGGGGATTGAGGCATGGTCTGCTGAACTGCCAGCTGCACAGTGGTGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR GCA 90 bp | TGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTGGCAGTTCAATTTCCTTGAGACTCTaGACATACCGGATTCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CPFPCVPKPLHHCAAGSSISLRL*TYRIRS Trigger: AGACCGAATCCGGTATGTGCAGAGTCTCAAGGAAAT...TGAACTGCCAGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR GCA 90 bp | GACCGCCATACCATAAGGGCAAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGAGTGAGCGAAGCTGCTaGATCTCCATTATGTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: DRHTIRASCPFPCVPKPLSERSC*ISIMLS Trigger: ACTCAACATAATGGAGATGCAGCAGCTTCGCTCACT...CAGGGGCTTGGGGACACACGGGAAAGGACAGCTTGCCCTTATGGTATGGCGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS TCA 90 bp | GAGGAGGCGCGGCGCGGAACGCGGCCAGAAGCCTGCACCGAGCCCTaGAGGAAGACGAGAGTAGGCCTCAGCAAAAGGGCTCCAGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: EEARRGTRPEACTEP*RKTRVGLSKRAPVP Trigger: GGGCACTGGAGCCCTTTTGCTGAGGCCTACTCTCGTCTTCCTTCAGGGCTCGGTGCAGGCTTCTGGCCGCGTTCCGCGCCGCGCCTCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138030.2 |
||
| CDS-3UTR CAA 90 bp | GCAAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTGGCGGCACATGGATGTCCTaGATCTCGTATCGCAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: ASCPFPCVPKPLHHCAAGGTWMS*ISYRRH Trigger: ATGCCTGCGATACGAGATCAAGGACATCCATGTGCC...GCCAGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACAGCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR CAA 90 bp | GACCGCCATACCATAAGGGCAAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGGCTTCGGCTTTAGCCTaGGCCTTGGCCAGAACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: DRHTIRASCPFPCVPKPLASALA*ALARTA Trigger: TGCAGTTCTGGCCAAGGCCAAGGCTAAAGCCGAAGC...CAGGGGCTTGGGGACACACGGGAAAGGACAGCTTGCCCTTATGGTATGGCGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR CAA 90 bp | AAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTGGCAGATGGCATCCACAATGTaGGCATTCAGGGACTCACGC | + |
|
Preference number: 5 (lower is better) Translates to: KLSFPVCPQAPAPLCSWQMASTM*AFRDSR Trigger: GCGTGAGTCCCTGAATGCCAACATTGTGGATGCCAT...CTGCCAGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACAGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR CAA 90 bp | AAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTGGCAGCAGTCTGCAGCCTGGTaGATGGCATCCACAATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KLSFPVCPQAPAPLCSWQQSAAW*MASTML Trigger: CAACATTGTGGATGCCATCAACCAGGCTGCAGACTG...CTGCCAGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACAGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR CAA 90 bp | CCTGCACCACTGTGCAGCTGGCAGTTCAGCAGACCATGCCTCAATCCCCGTACAGCTTTAGCCTTGGCCTaGGCCAGAACTGCACTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PAPLCSWQFSRPCLNPRTALALA*ARTALA Trigger: AGCCAGTGCAGTTCTGGCCAAGGCCAAGGCTAAAGC...TGTACGGGGATTGAGGCATGGTCTGCTGAACTGCCAGCTGCACAGTGGTGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR CAA 90 bp | AGGGCAAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTGGCAGTAGCACTGTGTaGGAATCCTTGGCCAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RASCPFPCVPKPLHHCAAGSSTV*ESLASL Trigger: CAAACTGGCCAAGGATTCCAACACAGTGCTACTGCC...AGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACAGCTTGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR CAA 90 bp | CAAGCCCCTGCACCACTGTGCAGCTGGCAGTTCAGCAGACCATGCCTCAATCCCTGCATCTCCATTATGTaGAGTCAGAGCCCCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QAPAPLCSWQFSRPCLNPCISIM*SQSPSQ Trigger: CTGGCTGGGGCTCTGACTCAACATAATGGAGATGCA...GGGATTGAGGCATGGTCTGCTGAACTGCCAGCTGCACAGTGGTGCAGGGGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS TCA 90 bp | TCTCGTATCGCAGGCATCGGATACCCCAGCAGTCTGCAGCCTGGTTaGTGGCATCCACAATGTTGGCATTCAGGGACTCACGCTCCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: SRIAGIGYPSSLQPG*WHPQCWHSGTHAPE Trigger: TTCGGGAGCGTGAGTCCCTGAATGCCAACATTGTGGATGCCATCAACCAGGCTGCAGACTGCTGGGGTATCCGATGCCTGCGATACGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 ENSMUST00000138030.2 |
||
| CDS CCA 90 bp | AGTTCTTCAATACTCGTGTCTGTAGCCTGGACATCTCTTCTGCTCTaGCTGGAGTTCTGGGCTCCGGGCACTGGGGCTTTGGTGAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSSILVSVAWTSLLL*LEFWAPGTGALVRA Trigger: GGCTCTCACCAAAGCCCCAGTGCCCGGAGCCCAGAACTCCAGCCAGAGCAGAAGAGATGTCCAGGCTACAGACACGAGTATTGAAGAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR CAA 90 bp | CCCCTGCACCACTGTGCAGCTGGCAGTTCAGCAGACCATGCCTCAATCCCCGTAGAATCCTTGGCCAGTTaGGAGAATGCGCTGACATAC | + |
|
Preference number: 5 (lower is better) Translates to: PLHHCAAGSSADHASIPVESLAS*ENALTY Trigger: GTATGTCAGCGCATTCTCCAAACTGGCCAAGGATTC...TACGGGGATTGAGGCATGGTCTGCTGAACTGCCAGCTGCACAGTGGTGCAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS GCA 90 bp | TGCACTGGCTTCTCCTGCCGCCTGATTTATCTGTTCAGCCTTTTCTaGTTCGGAGGCCAGAATCTGGGCCTGTTTCTTCCCCTCTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: CTGFSCRLIYLFSLF*FGGQNLGLFLPLCH Trigger: GTGGCAGAGGGGAAGAAACAGGCCCAGATTCTGGCCTCCGAAGCAGAAAAGGCTGAACAGATAAATCAGGCGGCAGGAGAAGCCAGTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 |
||
| CDS CCA 90 bp | TTGATCTCGTATCGCAGGCATCGGATACCCCAGCAGTCTGCAGCCTaGTTGATGGCATCCACAATGTTGGCATTCAGGGACTCACGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LISYRRHRIPQQSAA*LMASTMLAFRDSRS Trigger: GGAGCGTGAGTCCCTGAATGCCAACATTGTGGATGCCATCAACCAGGCTGCAGACTGCTGGGGTATCCGATGCCTGCGATACGAGATCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 ENSMUST00000138030.2 |
||
| CDS GCA 90 bp | GATGTCCTTGATCTCGTATCGCAGGCATCGGATACCCCAGCAGTCTaGAGCCTGGTTGATGGCATCCACAATGTTGGCATTCAGGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: DVLDLVSQASDTPAV*SLVDGIHNVGIQGL Trigger: GAGTCCCTGAATGCCAACATTGTGGATGCCATCAACCAGGCTGCAGACTGCTGGGGTATCCGATGCCTGCGATACGAGATCAAGGACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 ENSMUST00000138030.2 |
||
| CDS CCA 90 bp | GCCTCTACCTGCATCTGCATAGACTCTTTCACTCGAGGTGGCACATaGATGTCCTTGATCTCGTATCGCAGGCATCGGATACCCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ASTCICIDSFTRGGT*MSLISYRRHRIPQQ Trigger: CTGCTGGGGTATCCGATGCCTGCGATACGAGATCAAGGACATCCATGTGCCACCTCGAGTGAAAGAGTCTATGCAGATGCAGGTAGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 ENSMUST00000138030.2 |
||
| CDS CCA 90 bp | GCGCTCTGCCTCTACCTGCATCTGCATAGACTCTTTCACTCGAGGTaGCACATGGATGTCCTTGATCTCGTATCGCAGGCATCGGATACC | + |
|
Preference number: 5 (lower is better) Translates to: ALCLYLHLHRLFHSR*HMDVLDLVSQASDT Trigger: GGTATCCGATGCCTGCGATACGAGATCAAGGACATCCATGTGCCACCTCGAGTGAAAGAGTCTATGCAGATGCAGGTAGAGGCAGAGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 ENSMUST00000138030.2 |
||
| CDS CCA 90 bp | CTGAGCTTGACTCTACCCAGTTCTTCAATACTCGTGTCTGTAGCCTaGACATCTCTTCTGCTCTGGCTGGAGTTCTGGGCTCCGGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: LSLTLPSSSILVSVA*TSLLLWLEFWAPGT Trigger: AGTGCCCGGAGCCCAGAACTCCAGCCAGAGCAGAAGAGATGTCCAGGCTACAGACACGAGTATTGAAGAACTGGGTAGAGTCAAGCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR CAA 90 bp | AAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTGGCAGTTGATAACAATTTCCTaGAGACTCTGCACATACCGG | + |
|
Preference number: 5 (lower is better) Translates to: KLSFPVCPQAPAPLCSWQLITIS*RLCTYR Trigger: CCGGTATGTGCAGAGTCTCAAGGAAATTGTTATCAA...CTGCCAGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR CAA 90 bp | GACCGCCATACCATAAGGGCAAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGGACTGCTCAGGCACGTaGATAACAATTTCCTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: DRHTIRASCPFPCVPKPLDCSGT*ITISLR Trigger: TCTCAAGGAAATTGTTATCAACGTGCCTGAGCAGTC...CAGGGGCTTGGGGACACACGGGAAAGGACAGCTTGCCCTTATGGTATGGCGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS TCA 90 bp | TACTGCTCAGCCACAGTGAGCGAAGCTGCTGCATCTCCATTATGTTaGGTCAGAGCCCCAGCCAGAATTCGAATCGCTTCGGCTTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: YCSATVSEAAASPLC*VRAPARIRIASALA Trigger: GGCTAAAGCCGAAGCGATTCGAATTCTGGCTGGGGCTCTGACTCAACATAATGGAGATGCAGCAGCTTCGCTCACTGTGGCTGAGCAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 |
||
| CDS-3UTR CAA 90 bp | CAAGCTGTCCTTTCCCGTGTGTCCCCAAGCCCCTGCACCACTGTGCAGCTGGCAATTTGTAGTGTTACATaGTCAAGAGTTACGGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: QAVLSRVSPSPCTTVQLAICSVT*SRVTAD Trigger: GTCAGCCGTAACTCTTGACAATGTAACACTACAAAT...TGCCAGCTGCACAGTGGTGCAGGGGCTTGGGGACACACGGGAAAGGACAGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS-3UTR CAA 90 bp | CCTGCACCACTGTGCAGCTGGCAGTTCAGCAGACCATGCCTCAATCCCCGTACATTGTCCAGAGAGAGTTaGCCAAGCTCTGATCTCATA | + |
|
Preference number: 5 (lower is better) Translates to: PAPLCSWQFSRPCLNPRTLSRES*PSSDLI Trigger: TATGAGATCAGAGCTTGGCAAACTCTCTCTGGACAA...TGTACGGGGATTGAGGCATGGTCTGCTGAACTGCCAGCTGCACAGTGGTGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS GCA 90 bp | ACGGCTGACTGCTCAGGCACGTTGATAACAATTTCCTTGAGACTCTaGACATACCGGATTCGGTCTAACACGGGGATCAGGACGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TADCSGTLITISLRL*TYRIRSNTGIRTFR Trigger: CCTGAACGTCCTGATCCCCGTGTTAGACCGAATCCGGTATGTGCAGAGTCTCAAGGAAATTGTTATCAACGTGCCTGAGCAGTCAGCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 ENSMUST00000138030.2 |
||
| CDS GCA 90 bp | GGAGAATGCGCTGACATACTGCTCAGCCACAGTGAGCGAAGCTGCTaGATCTCCATTATGTTGAGTCAGAGCCCCAGCCAGAATTCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GECADILLSHSERSC*ISIMLSQSPSQNSN Trigger: ATTCGAATTCTGGCTGGGGCTCTGACTCAACATAATGGAGATGCAGCAGCTTCGCTCACTGTGGCTGAGCAGTATGTCAGCGCATTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 |
||
| CDS GCA 90 bp | TTTGGAGAATGCGCTGACATACTGCTCAGCCACAGTGAGCGAAGCTaGTGCATCTCCATTATGTTGAGTCAGAGCCCCAGCCAGAATTCG | + |
|
Preference number: 5 (lower is better) Translates to: FGECADILLSHSERS*CISIMLSQSPSQNS Trigger: CGAATTCTGGCTGGGGCTCTGACTCAACATAATGGAGATGCAGCAGCTTCGCTCACTGTGGCTGAGCAGTATGTCAGCGCATTCTCCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 |
||
| CDS TCA 72 bp | GGCTGGAGTTCTGGGCTCCGGGCACTGGGGCTTTGGTaGGAGCCCCATAGACACCCATGGCCTGAGCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: GWSSGLRALGLW*EPHRHPWPEPP Trigger: TGGTGGCTCAGGCCATGGGTGTCTATGGGGCTCTCACCAAAGCCCCAGTGCCCGGAGCCCAGAACTCCAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030169.15 ENSMUST00000136326.8 |
||
| CDS TCA 72 bp | CGGCGCGGAACGCGGCCAGAAGCCTGCACCGAGCCCTaGAGGAAGACGAGAGTAGGCCTCAGCAAAAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RRGTRPEACTEP*RKTRVGLSKRA Trigger: AGCCCTTTTGCTGAGGCCTACTCTCGTCTTCCTTCAGGGCTCGGTGCAGGCTTCTGGCCGCGTTCCGCGCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138030.2 |
||
| CDS CCA 72 bp | GTAGCCTGGACATCTCTTCTGCTCTGGCTGGAGTTCTaGGCTCCGGGCACTGGGGCTTTGGTGAGAGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: VAWTSLLLWLEF*APGTGALVRAP Trigger: TGGGGCTCTCACCAAAGCCCCAGTGCCCGGAGCCCAGAACTCCAGCCAGAGCAGAAGAGATGTCCAGGCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS TCA 72 bp | CCCCATAGACACCCATGGCCTGAGCCACCATACTCGTaGCGTCGCTGGGATTGGAGGGCAGTAGCACTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: PHRHPWPEPPYS*RRWDWRAVALC Trigger: ACACAGTGCTACTGCCCTCCAATCCCAGCGACGTCACGAGTATGGTGGCTCAGGCCATGGGTGTCTATGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 |
||
| CDS CAA 72 bp | GCCCCAGCCAGAATTCGAATCGCTTCGGCTTTAGCCTaGGCCTTGGCCAGAACTGCACTGGCTTCTCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: APARIRIASALA*ALARTALASPA Trigger: GGCAGGAGAAGCCAGTGCAGTTCTGGCCAAGGCCAAGGCTAAAGCCGAAGCGATTCGAATTCTGGCTGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 |
||
| CDS CCA 72 bp | ATACTCGTGTCTGTAGCCTGGACATCTCTTCTGCTCTaGCTGGAGTTCTGGGCTCCGGGCACTGGGGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: ILVSVAWTSLLL*LEFWAPGTGAL Trigger: CAAAGCCCCAGTGCCCGGAGCCCAGAACTCCAGCCAGAGCAGAAGAGATGTCCAGGCTACAGACACGAGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030169.15 |
||
| CDS CAA 90 bp | ATCTCGTATCGCAGGCATCGGATACCCCAGCAGTCTGCAGCCTGGTaGATGGCATCCACAATGTTGGCATTCAGGGACTCACGCTCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: ISYRRHRIPQQSAAW*MASTMLAFRDSRSR Trigger: TCGGGAGCGTGAGTCCCTGAATGCCAACATTGTGGATGCCATCAACCAGGCTGCAGACTGCTGGGGTATCCGATGCCTGCGATACGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 ENSMUST00000138030.2 |
||
| CDS TCA 72 bp | GCAGGCATCGGATACCCCAGCAGTCTGCAGCCTGGTTaGTGGCATCCACAATGTTGGCATTCAGGGACTCAC | + |
|
Preference number: 6 (lower is better) Translates to: AGIGYPSSLQPG*WHPQCWHSGTH Trigger: GTGAGTCCCTGAATGCCAACATTGTGGATGCCATCAACCAGGCTGCAGACTGCTGGGGTATCCGATGCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 ENSMUST00000138030.2 |
||
| CDS CAA 72 bp | CGCAGGCATCGGATACCCCAGCAGTCTGCAGCCTGGTaGATGGCATCCACAATGTTGGCATTCAGGGACTCA | + |
|
Preference number: 6 (lower is better) Translates to: RRHRIPQQSAAW*MASTMLAFRDS Trigger: TGAGTCCCTGAATGCCAACATTGTGGATGCCATCAACCAGGCTGCAGACTGCTGGGGTATCCGATGCCTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 ENSMUST00000138030.2 |
||
| CDS GCA 72 bp | GCTGACATACTGCTCAGCCACAGTGAGCGAAGCTGCTaGATCTCCATTATGTTGAGTCAGAGCCCCAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ADILLSHSERSC*ISIMLSQSPSQ Trigger: CTGGCTGGGGCTCTGACTCAACATAATGGAGATGCAGCAGCTTCGCTCACTGTGGCTGAGCAGTATGTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 |
||
| CDS GCA 72 bp | TGCGCTGACATACTGCTCAGCCACAGTGAGCGAAGCTaGTGCATCTCCATTATGTTGAGTCAGAGCCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CADILLSHSERS*CISIMLSQSPS Trigger: GCTGGGGCTCTGACTCAACATAATGGAGATGCAGCAGCTTCGCTCACTGTGGCTGAGCAGTATGTCAGCGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 |
||
| CDS CCA 72 bp | TATCGCAGGCATCGGATACCCCAGCAGTCTGCAGCCTaGTTGATGGCATCCACAATGTTGGCATTCAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: YRRHRIPQQSAA*LMASTMLAFRD Trigger: GTCCCTGAATGCCAACATTGTGGATGCCATCAACCAGGCTGCAGACTGCTGGGGTATCCGATGCCTGCGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 ENSMUST00000138030.2 |
||
| CDS CAA 72 bp | GTGACGTCGCTGGGATTGGAGGGCAGTAGCACTGTGTaGGAATCCTTGGCCAGTTTGGAGAATGCGCTGACA | + |
|
Preference number: 6 (lower is better) Translates to: VTSLGLEGSSTV*ESLASLENALT Trigger: TGTCAGCGCATTCTCCAAACTGGCCAAGGATTCCAACACAGTGCTACTGCCCTCCAATCCCAGCGACGTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 |
||
| CDS CAA 90 bp | CGGATACCCCAGCAGTCTGCAGCCTGGTTGATGGCATCCACAATGTaGGCATTCAGGGACTCACGCTCCCGAAAAACTTTGTCCAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: RIPQQSAAWLMASTM*AFRDSRSRKTLSRE Trigger: CTCTCTGGACAAAGTTTTTCGGGAGCGTGAGTCCCTGAATGCCAACATTGTGGATGCCATCAACCAGGCTGCAGACTGCTGGGGTATCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 ENSMUST00000138030.2 |
||
| CDS CAA 90 bp | TGCATCTGCATAGACTCTTTCACTCGAGGTGGCACATGGATGTCCTaGATCTCGTATCGCAGGCATCGGATACCCCAGCAGTCTGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: CICIDSFTRGGTWMS*ISYRRHRIPQQSAA Trigger: GGCTGCAGACTGCTGGGGTATCCGATGCCTGCGATACGAGATCAAGGACATCCATGTGCCACCTCGAGTGAAAGAGTCTATGCAGATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 ENSMUST00000138030.2 |
||
| CDS CAA 90 bp | CTGGGATTGGAGGGCAGTAGCACTGTGTTGGAATCCTTGGCCAGTTaGGAGAATGCGCTGACATACTGCTCAGCCACAGTGAGCGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LGLEGSSTVLESLAS*ENALTYCSATVSEA Trigger: AGCTTCGCTCACTGTGGCTGAGCAGTATGTCAGCGCATTCTCCAAACTGGCCAAGGATTCCAACACAGTGCTACTGCCCTCCAATCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 |
||
| CDS GCA 72 bp | GATCTCGTATCGCAGGCATCGGATACCCCAGCAGTCTaGAGCCTGGTTGATGGCATCCACAATGTTGGCATT | + |
|
Preference number: 6 (lower is better) Translates to: DLVSQASDTPAV*SLVDGIHNVGI Trigger: AATGCCAACATTGTGGATGCCATCAACCAGGCTGCAGACTGCTGGGGTATCCGATGCCTGCGATACGAGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 ENSMUST00000138030.2 |
||
| CDS CAA 72 bp | GAGGGCAGTAGCACTGTGTTGGAATCCTTGGCCAGTTaGGAGAATGCGCTGACATACTGCTCAGCCACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: EGSSTVLESLAS*ENALTYCSATV Trigger: CACTGTGGCTGAGCAGTATGTCAGCGCATTCTCCAAACTGGCCAAGGATTCCAACACAGTGCTACTGCCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 |
||
| CDS CAA 90 bp | ACCATACTCGTGACGTCGCTGGGATTGGAGGGCAGTAGCACTGTGTaGGAATCCTTGGCCAGTTTGGAGAATGCGCTGACATACTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: TILVTSLGLEGSSTV*ESLASLENALTYCS Trigger: TGAGCAGTATGTCAGCGCATTCTCCAAACTGGCCAAGGATTCCAACACAGTGCTACTGCCCTCCAATCCCAGCGACGTCACGAGTATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 |
||
| CDS GCA 72 bp | TTCTCCTGCCGCCTGATTTATCTGTTCAGCCTTTTCTaGTTCGGAGGCCAGAATCTGGGCCTGTTTCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: FSCRLIYLFSLF*FGGQNLGLFLP Trigger: GGGAAGAAACAGGCCCAGATTCTGGCCTCCGAAGCAGAAAAGGCTGAACAGATAAATCAGGCGGCAGGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 |
||
| CDS CAA 72 bp | CAGCAGTCTGCAGCCTGGTTGATGGCATCCACAATGTaGGCATTCAGGGACTCACGCTCCCGAAAAACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: QQSAAWLMASTM*AFRDSRSRKTL Trigger: CAAAGTTTTTCGGGAGCGTGAGTCCCTGAATGCCAACATTGTGGATGCCATCAACCAGGCTGCAGACTGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 ENSMUST00000138030.2 |
||
| CDS CAA 72 bp | ATAGACTCTTTCACTCGAGGTGGCACATGGATGTCCTaGATCTCGTATCGCAGGCATCGGATACCCCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: IDSFTRGGTWMS*ISYRRHRIPQQ Trigger: CTGCTGGGGTATCCGATGCCTGCGATACGAGATCAAGGACATCCATGTGCCACCTCGAGTGAAAGAGTCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 ENSMUST00000138030.2 |
||
| CDS CAA 90 bp | ATACTGCTCAGCCACAGTGAGCGAAGCTGCTGCATCTCCATTATGTaGAGTCAGAGCCCCAGCCAGAATTCGAATCGCTTCGGCTTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: ILLSHSERSCCISIM*SQSPSQNSNRFGFS Trigger: GCTAAAGCCGAAGCGATTCGAATTCTGGCTGGGGCTCTGACTCAACATAATGGAGATGCAGCAGCTTCGCTCACTGTGGCTGAGCAGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 |
||
| CDS CCA 72 bp | CTCTACCTGCATCTGCATAGACTCTTTCACTCGAGGTaGCACATGGATGTCCTTGATCTCGTATCGCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LYLHLHRLFHSR*HMDVLDLVSQA Trigger: TGCCTGCGATACGAGATCAAGGACATCCATGTGCCACCTCGAGTGAAAGAGTCTATGCAGATGCAGGTAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 ENSMUST00000138030.2 |
||
| CDS CAA 90 bp | TCAAGAGTTACGGCTGACTGCTCAGGCACGTTGATAACAATTTCCTaGAGACTCTGCACATACCGGATTCGGTCTAACACGGGGATCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SRVTADCSGTLITIS*RLCTYRIRSNTGIR Trigger: CCTGATCCCCGTGTTAGACCGAATCCGGTATGTGCAGAGTCTCAAGGAAATTGTTATCAACGTGCCTGAGCAGTCAGCCGTAACTCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 ENSMUST00000138030.2 |
||
| CDS TCA 72 bp | AGAGAGAGTTTGCCAAGCTCTGATCTCATAGTCGTCTaGGCTAACTGGGTGACAGCATACTCTGGGTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RESLPSSDLIVV*ANWVTAYSGSS Trigger: GGAAGACCCAGAGTATGCTGTCACCCAGTTAGCTCAGACGACTATGAGATCAGAGCTTGGCAAACTCTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 ENSMUST00000138030.2 |
||
| CDS GCA 72 bp | TGCTCAGGCACGTTGATAACAATTTCCTTGAGACTCTaGACATACCGGATTCGGTCTAACACGGGGATCAGG | + |
|
Preference number: 6 (lower is better) Translates to: CSGTLITISLRL*TYRIRSNTGIR Trigger: CCTGATCCCCGTGTTAGACCGAATCCGGTATGTGCAGAGTCTCAAGGAAATTGTTATCAACGTGCCTGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 ENSMUST00000138030.2 |
||
| CDS CCA 72 bp | TGCATCTGCATAGACTCTTTCACTCGAGGTGGCACATaGATGTCCTTGATCTCGTATCGCAGGCATCGGATA | + |
|
Preference number: 6 (lower is better) Translates to: CICIDSFTRGGT*MSLISYRRHRI Trigger: TATCCGATGCCTGCGATACGAGATCAAGGACATCCATGTGCCACCTCGAGTGAAAGAGTCTATGCAGATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 ENSMUST00000138030.2 |
||
| CDS CCA 72 bp | ATCTGTTCAGCCTTTTCTGCTTCGGAGGCCAGAATCTaGGCCTGTTTCTTCCCCTCTGCCACATTAATAGCT | + |
|
Preference number: 6 (lower is better) Translates to: ICSAFSASEARI*ACFFPSATLIA Trigger: AGCTATTAATGTGGCAGAGGGGAAGAAACAGGCCCAGATTCTGGCCTCCGAAGCAGAAAAGGCTGAACAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 |
||
| CDS CAA 72 bp | ACGGCTGACTGCTCAGGCACGTTGATAACAATTTCCTaGAGACTCTGCACATACCGGATTCGGTCTAACACG | + |
|
Preference number: 6 (lower is better) Translates to: TADCSGTLITIS*RLCTYRIRSNT Trigger: CGTGTTAGACCGAATCCGGTATGTGCAGAGTCTCAAGGAAATTGTTATCAACGTGCCTGAGCAGTCAGCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 ENSMUST00000138030.2 |
||
| CDS CAA 72 bp | ACATTGTCAAGAGTTACGGCTGACTGCTCAGGCACGTaGATAACAATTTCCTTGAGACTCTGCACATACCGG | + |
|
Preference number: 6 (lower is better) Translates to: TLSRVTADCSGT*ITISLRLCTYR Trigger: CCGGTATGTGCAGAGTCTCAAGGAAATTGTTATCAACGTGCCTGAGCAGTCAGCCGTAACTCTTGACAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 ENSMUST00000138030.2 |
||
| CDS CAA 90 bp | TGTAGTGTTACATTGTCAAGAGTTACGGCTGACTGCTCAGGCACGTaGATAACAATTTCCTTGAGACTCTGCACATACCGGATTCGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: CSVTLSRVTADCSGT*ITISLRLCTYRIRS Trigger: AGACCGAATCCGGTATGTGCAGAGTCTCAAGGAAATTGTTATCAACGTGCCTGAGCAGTCAGCCGTAACTCTTGACAATGTAACACTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 ENSMUST00000138030.2 |
||
| CDS TCA 72 bp | GGTCTTCCACACCGTAACTTGCCTTGTAAGGATCCATaGTGCGCAGATAAAGGACTCCATCTATTTGTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: GLPHRNLPCKDP*CADKGLHLFVV Trigger: CACTACAAATAGATGGAGTCCTTTATCTGCGCATCATGGATCCTTACAAGGCAAGTTACGGTGTGGAAGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030169.15 ENSMUST00000135660.8 ENSMUST00000136326.8 ENSMUST00000138030.2 |
||