Pregenerated sensors for STN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042694Ensembl transcript IDs: ENSMUST00000049369.16, ENSMUST00000182714.2, ENSMUST00000182808.8
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTATTTCTGCTCCAGTTCAGATGTGGAGGAGCCTTCGCCCTGGGATaGCCCTCTATCGAGACGGGGCCCCTGAATTCAGACACAGTGATT | + |
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Preference number: 1 (lower is better) Translates to: LFLLQFRCGGAFALG*PSIETGPLNSDTVI Trigger: AATCACTGTGTCTGAATTCAGGGGCCCCGTCTCGATAGAGGGGCATCCCAGGGCGAAGGCTCCTCCACATCTGAACTGGAGCAGAAATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| 3UTR GCA 90 bp | GTAGCTTGGAGTGTGACGTTTTCAGACGGTGTAGTCTGCTATTTCTaGTCCAGTTCAGATGTGGAGGAGCCTTCGCCCTGGGATGCCCCT | + |
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Preference number: 1 (lower is better) Translates to: VAWSVTFSDGVVCYF*SSSDVEEPSPWDAP Trigger: AGGGGCATCCCAGGGCGAAGGCTCCTCCACATCTGAACTGGAGCAGAAATAGCAGACTACACCGTCTGAAAACGTCACACTCCAAGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| 3UTR CCA 90 bp | GGGAAGTCCAGCCAGGGAGCTGACAAGGAGGGCTTGTGTGTGTCATaGCTGACATCAGAGCCATCTGTCTCAGTCCTATTTTCCTGTGAC | + |
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Preference number: 1 (lower is better) Translates to: GKSSQGADKEGLCVS*LTSEPSVSVLFSCD Trigger: GTCACAGGAAAATAGGACTGAGACAGATGGCTCTGATGTCAGCCATGACACACACAAGCCCTCCTTGTCAGCTCCCTGGCTGGACTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| 3UTR TCA 90 bp | GACACAGTGATTAAACCAGCAACACCGTTTTCTCCCATTCTGTTCTaGGTGATGGGAAGTCCAGCCAGGGAGCTGACAAGGAGGGCTTGT | + |
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Preference number: 1 (lower is better) Translates to: DTVIKPATPFSPILF*VMGSPARELTRRAC Trigger: ACAAGCCCTCCTTGTCAGCTCCCTGGCTGGACTTCCCATCACTCAGAACAGAATGGGAGAAAACGGTGTTGCTGGTTTAATCACTGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| 3UTR GCA 90 bp | ATGTATGTGGTAGCTTGGAGTGTGACGTTTTCAGACGGTGTAGTCTaGTATTTCTGCTCCAGTTCAGATGTGGAGGAGCCTTCGCCCTGG | + |
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Preference number: 1 (lower is better) Translates to: MYVVAWSVTFSDGVV*YFCSSSDVEEPSPW Trigger: CCAGGGCGAAGGCTCCTCCACATCTGAACTGGAGCAGAAATAGCAGACTACACCGTCTGAAAACGTCACACTCCAAGCTACCACATACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| 3UTR TCA 90 bp | GTCATGGCTGACATCAGAGCCATCTGTCTCAGTCCTATTTTCCTGTaGCTTATCAGAGCTTACTATGGGATGTGTAAGTCTTTACTGGGC | + |
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Preference number: 1 (lower is better) Translates to: VMADIRAICLSPIFL*LIRAYYGMCKSLLG Trigger: GCCCAGTAAAGACTTACACATCCCATAGTAAGCTCTGATAAGTCACAGGAAAATAGGACTGAGACAGATGGCTCTGATGTCAGCCATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| 3UTR-3UTR TCA 90 bp | CTGCTCCAGTTCAGATGTGGAGGAGCCTTCGCCCTGGGATGCCCCTCTATCGAGTCTTTACTGGGCCTGTaGGCAGAACCTAGGGTAGAG | + |
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Preference number: 2 (lower is better) Translates to: LLQFRCGGAFALGCPSIESLLGL*AEPRVE Trigger: CTCTACCCTAGGTTCTGCTCACAGGCCCAGTAAAGA...CTCGATAGAGGGGCATCCCAGGGCGAAGGCTCCTCCACATCTGAACTGGAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| 3UTR-3UTR TCA 90 bp | CGGTGTAGTCTGCTATTTCTGCTCCAGTTCAGATGTGGAGGAGCCTTCGCCCTGTCTCCCATTCTGTTCTaGGTGATGGGAAGTCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: RCSLLFLLQFRCGGAFALSPILF*VMGSPA Trigger: GGCTGGACTTCCCATCACTCAGAACAGAATGGGAGA...CAGGGCGAAGGCTCCTCCACATCTGAACTGGAGCAGAAATAGCAGACTACACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| 3UTR-3UTR TCA 90 bp | ACCAGCAACACCGTTTTCTCCCATTCTGTTCTGAGTGATGGGAAGTCCAGCCAGTGTGTGTGTCATGGCTaGCATCAGAGCCATCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: TSNTVFSHSVLSDGKSSQCVCHG*HQSHLS Trigger: AGACAGATGGCTCTGATGTCAGCCATGACACACACA...CTGGCTGGACTTCCCATCACTCAGAACAGAATGGGAGAAAACGGTGTTGCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| 3UTR-3UTR TCA 90 bp | CAGCCACTAGGGGCCGACCTAACTCCACAAACCGGCACTATTTTTCTAAGCCATGAAGAGAGTGAATGTTaGCATTACATTCAGAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: QPLGADLTPQTGTIFLSHEESEC*HYIQRQ Trigger: CTGCCTCTGAATGTAATGTCAACATTCACTCTCTTC...ATGGCTTAGAAAAATAGTGCCGGTTTGTGGAGTTAGGTCGGCCCCTAGTGGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
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| 3UTR-3UTR TCA 90 bp | AGTTTGAGTGTCCAGCCACTAGGGGCCGACCTAACTCCACAAACCGGCACTATTAAGGGTTTCTTGAGATaGCTGGATTTCGTTATTCAT | + |
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Preference number: 2 (lower is better) Translates to: SLSVQPLGADLTPQTGTIKGFLR*LDFVIH Trigger: ATGAATAACGAAATCCAGTCATCTCAAGAAACCCTT...AATAGTGCCGGTTTGTGGAGTTAGGTCGGCCCCTAGTGGCTGGACACTCAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
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| 3UTR CAA 90 bp | TCTCTATTTCCATCATCCGAGCGTTGGAATCTGGTTATGTACAGGTaGGGAGAAAGAGCTCAATGCAAAGCTCAAAGTTTGATCAACTTC | + |
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Preference number: 2 (lower is better) Translates to: SLFPSSERWNLVMYR*GERAQCKAQSLINF Trigger: GAAGTTGATCAAACTTTGAGCTTTGCATTGAGCTCTTTCTCCCAACCTGTACATAACCAGATTCCAACGCTCGGATGATGGAAATAGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182714.2 |
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| 3UTR GCA 72 bp | CTCCAGTTCAGATGTGGAGGAGCCTTCGCCCTGGGATaGCCCTCTATCGAGACGGGGCCCCTGAATTCAGAC | + |
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Preference number: 3 (lower is better) Translates to: LQFRCGGAFALG*PSIETGPLNSD Trigger: GTCTGAATTCAGGGGCCCCGTCTCGATAGAGGGGCATCCCAGGGCGAAGGCTCCTCCACATCTGAACTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| 3UTR TCA 72 bp | AGATCTGCAAGCCTCAGCAGCCCTCACCGCTACTGCTaGAGTCCCAGGAAACTGAGGCAAACGTCAATTACT | + |
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Preference number: 3 (lower is better) Translates to: RSASLSSPHRYC*SPRKLRQTSIT Trigger: AGTAATTGACGTTTGCCTCAGTTTCCTGGGACTTCAGCAGTAGCGGTGAGGGCTGCTGAGGCTTGCAGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| 3UTR GCA 72 bp | AGTGTGACGTTTTCAGACGGTGTAGTCTGCTATTTCTaGTCCAGTTCAGATGTGGAGGAGCCTTCGCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: SVTFSDGVVCYF*SSSDVEEPSPW Trigger: CCAGGGCGAAGGCTCCTCCACATCTGAACTGGAGCAGAAATAGCAGACTACACCGTCTGAAAACGTCACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| 3UTR TCA 72 bp | ATTAAACCAGCAACACCGTTTTCTCCCATTCTGTTCTaGGTGATGGGAAGTCCAGCCAGGGAGCTGACAAGG | + |
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Preference number: 3 (lower is better) Translates to: IKPATPFSPILF*VMGSPARELTR Trigger: CCTTGTCAGCTCCCTGGCTGGACTTCCCATCACTCAGAACAGAATGGGAGAAAACGGTGTTGCTGGTTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| 3UTR GCA 72 bp | GCCATGCATTGGAGTTTTTATTCTTCAATGCAGATCTaGAAGCCTCAGCAGCCCTCACCGCTACTGCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: AMHWSFYSSMQI*KPQQPSPLLLK Trigger: CTTCAGCAGTAGCGGTGAGGGCTGCTGAGGCTTGCAGATCTGCATTGAAGAATAAAAACTCCAATGCATGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| 3UTR CCA 72 bp | CATCGTCTCTATTTCCATCATCCGAGCGTTGGAATCTaGTTATGTACAGGTTGGGAGAAAGAGCTCAATGCA | + |
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Preference number: 3 (lower is better) Translates to: HRLYFHHPSVGI*LCTGWEKELNA Trigger: TGCATTGAGCTCTTTCTCCCAACCTGTACATAACCAGATTCCAACGCTCGGATGATGGAAATAGAGACGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182714.2 |
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| 3UTR CCA 72 bp | AACCCTTCATCGTCTCTATTTCCATCATCCGAGCGTTaGAATCTGGTTATGTACAGGTTGGGAGAAAGAGCT | + |
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Preference number: 3 (lower is better) Translates to: NPSSSLFPSSER*NLVMYRLGERA Trigger: AGCTCTTTCTCCCAACCTGTACATAACCAGATTCCAACGCTCGGATGATGGAAATAGAGACGATGAAGGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182714.2 |
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| 3UTR TCA 72 bp | GACATCAGAGCCATCTGTCTCAGTCCTATTTTCCTGTaGCTTATCAGAGCTTACTATGGGATGTGTAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: DIRAICLSPIFL*LIRAYYGMCKS Trigger: AGACTTACACATCCCATAGTAAGCTCTGATAAGTCACAGGAAAATAGGACTGAGACAGATGGCTCTGATGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| 3UTR TCA 72 bp | GATAAGACGGATGCTTTCTTTGTAATTAGGGTGAATTaGTATGCGAGTTATCAGACTAGATGTAGTTTGAGT | + |
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Preference number: 3 (lower is better) Translates to: DKTDAFFVIRVN*YASYQTRCSLS Trigger: ACTCAAACTACATCTAGTCTGATAACTCGCATATCAATTCACCCTAATTACAAAGAAAGCATCCGTCTTATC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
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| CDS-3UTR TCA 90 bp | TGCTCCAGTTCAGATGTGGAGGAGCCTTCGCCCTGGGATGCCCCTCTATCGAGAGGTCCCAGCGGAGGTTaGGGTGCACACAGTTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: CSSSDVEEPSPWDAPLSRGPSGG*GAHSSG Trigger: TCCTGAACTGTGTGCACCTCAACCTCCGCTGGGACC...TCTCGATAGAGGGGCATCCCAGGGCGAAGGCTCCTCCACATCTGAACTGGAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| CDS-3UTR GCA 90 bp | GATGGGAAGTCCAGCCAGGGAGCTGACAAGGAGGGCTTGTGTGTGTCATGGCTGGCTCTTCTCGGAACATaGGCACAGAGCCTCGGACTC | + |
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Preference number: 4 (lower is better) Translates to: DGKSSQGADKEGLCVSWLALLGT*AQSLGL Trigger: GAGTCCGAGGCTCTGTGCGCATGTTCCGAGAAGAGC...CAGCCATGACACACACAAGCCCTCCTTGTCAGCTCCCTGGCTGGACTTCCCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| CDS-3UTR GCA 90 bp | CAGCCACTAGGGGCCGACCTAACTCCACAAACCGGCACTATTTTTCTAAGCCATGCTCTTCTCGGAACATaGGCACAGAGCCTCGGACTC | + |
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Preference number: 4 (lower is better) Translates to: QPLGADLTPQTGTIFLSHALLGT*AQSLGL Trigger: GAGTCCGAGGCTCTGTGCGCATGTTCCGAGAAGAGC...ATGGCTTAGAAAAATAGTGCCGGTTTGTGGAGTTAGGTCGGCCCCTAGTGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
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| CDS-3UTR GCA 90 bp | CAGCAGCCCTCACCGCTACTGCTGAAGTCCCAGGAAACTGAGGCAAACGTCAATGCGCTACGCCAGAAGTaGCACTGTCCTTTAACTCCA | + |
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Preference number: 4 (lower is better) Translates to: QQPSPLLLKSQETEANVNALRQK*HCPLTP Trigger: TGGAGTTAAAGGACAGTGGCACTTCTGGCGTAGCGC...ATTGACGTTTGCCTCAGTTTCCTGGGACTTCAGCAGTAGCGGTGAGGGCTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| CDS-3UTR CCA 90 bp | GATGGGAAGTCCAGCCAGGGAGCTGACAAGGAGGGCTTGTGTGTGTCATGGCTGCCTCTTCCCTTGGACTaGATTCACACTCCATCAAGA | + |
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Preference number: 4 (lower is better) Translates to: DGKSSQGADKEGLCVSWLPLPLD*IHTPSR Trigger: TCTTGATGGAGTGTGAATCCAGTCCAAGGGAAGAGG...CAGCCATGACACACACAAGCCCTCCTTGTCAGCTCCCTGGCTGGACTTCCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| CDS-3UTR CCA 90 bp | GGTGTAGTCTGCTATTTCTGCTCCAGTTCAGATGTGGAGGAGCCTTCGCCCTGGGAGCCACTGTCTCTCTaGAACACGAGTCCTTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: GVVCYFCSSSDVEEPSPWEPLSL*NTSPFS Trigger: GGAAAAAGGACTCGTGTTCCAGAGAGACAGTGGCTC...CCAGGGCGAAGGCTCCTCCACATCTGAACTGGAGCAGAAATAGCAGACTACACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| CDS-3UTR CCA 90 bp | CAGCCACTAGGGGCCGACCTAACTCCACAAACCGGCACTATTTTTCTAAGCCATGGAGAGCTTGGTGGTTaGCCTCCAGCTTATCCGGTT | + |
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Preference number: 4 (lower is better) Translates to: QPLGADLTPQTGTIFLSHGELGG*PPAYPV Trigger: AACCGGATAAGCTGGAGGCCAACCACCAAGCTCTCC...ATGGCTTAGAAAAATAGTGCCGGTTTGTGGAGTTAGGTCGGCCCCTAGTGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
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| CDS-3UTR CCA 90 bp | CAGCCACTAGGGGCCGACCTAACTCCACAAACCGGCACTATTTTTCTAAGCCATTCAGGGAGAGCTTGGTaGTTGGCCTCCAGCTTATCC | + |
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Preference number: 4 (lower is better) Translates to: QPLGADLTPQTGTIFLSHSGRAW*LASSLS Trigger: GGATAAGCTGGAGGCCAACCACCAAGCTCTCCCTGA...ATGGCTTAGAAAAATAGTGCCGGTTTGTGGAGTTAGGTCGGCCCCTAGTGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
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| CDS-3UTR CCA 90 bp | AGTTTGAGTGTCCAGCCACTAGGGGCCGACCTAACTCCACAAACCGGCACTATTATCTCAGGGAGAGCTTaGTGGTTGGCCTCCAGCTTA | + |
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Preference number: 4 (lower is better) Translates to: SLSVQPLGADLTPQTGTIISGRA*WLASSL Trigger: TAAGCTGGAGGCCAACCACCAAGCTCTCCCTGAGAT...AATAGTGCCGGTTTGTGGAGTTAGGTCGGCCCCTAGTGGCTGGACACTCAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
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| CDS-3UTR GCA 90 bp | CGGTGTAGTCTGCTATTTCTGCTCCAGTTCAGATGTGGAGGAGCCTTCGCCCTGTGCTCGATGGTCTCCTaGAGCTTCTTAAGCTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: RCSLLFLLQFRCGGAFALCSMVS*SFLSCD Trigger: ATCACAGCTTAAGAAGCTGCAGGAGACCATCGAGCA...CAGGGCGAAGGCTCCTCCACATCTGAACTGGAGCAGAAATAGCAGACTACACCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| CDS-3UTR GCA 90 bp | AACACCGTTTTCTCCCATTCTGTTCTGAGTGATGGGAAGTCCAGCCAGGGAGCTCGACTGGCCAGAGACTaGAAAGACTCCACTGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: NTVFSHSVLSDGKSSQGARLARD*KDSTVS Trigger: AGAGACAGTGGAGTCTTTGCAGTCTCTGGCCAGTCG...AGCTCCCTGGCTGGACTTCCCATCACTCAGAACAGAATGGGAGAAAACGGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| CDS-3UTR CCA 90 bp | CAGACTAGATGTAGTTTGAGTGTCCAGCCACTAGGGGCCGACCTAACTCCACAAGTACCTGGCACTTGTTaGGACTCCTTCATCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: QTRCSLSVQPLGADLTPQVPGTC*DSFISR Trigger: CCTGGAGATGAAGGAGTCCCAACAAGTGCCAGGTAC...TTGTGGAGTTAGGTCGGCCCCTAGTGGCTGGACACTCAAACTACATCTAGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
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| CDS-3UTR CCA 90 bp | ACCAGCAACACCGTTTTCTCCCATTCTGTTCTGAGTGATGGGAAGTCCAGCCAGCCTTCTGGTAGAGCTTaGGCAGCTCAAGCATCCTTG | + |
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Preference number: 4 (lower is better) Translates to: TSNTVFSHSVLSDGKSSQPSGRA*AAQASL Trigger: CAAGGATGCTTGAGCTGCCCAAGCTCTACCAGAAGG...CTGGCTGGACTTCCCATCACTCAGAACAGAATGGGAGAAAACGGTGTTGCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| CDS-3UTR CCA 90 bp | CAGCCACTAGGGGCCGACCTAACTCCACAAACCGGCACTATTTTTCTAAGCCATCCTTCTGGTAGAGCTTaGGCAGCTCAAGCATCCTTG | + |
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Preference number: 4 (lower is better) Translates to: QPLGADLTPQTGTIFLSHPSGRA*AAQASL Trigger: CAAGGATGCTTGAGCTGCCCAAGCTCTACCAGAAGG...ATGGCTTAGAAAAATAGTGCCGGTTTGTGGAGTTAGGTCGGCCCCTAGTGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
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| CDS-3UTR CCA 90 bp | CTGCTCCAGTTCAGATGTGGAGGAGCCTTCGCCCTGGGATGCCCCTCTATCGAGCTTCTCCATATGGTTTaGTTTCTGACAGTCTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LLQFRCGGAFALGCPSIELLHMV*FLTVFL Trigger: AAGGAAGACTGTCAGAAACCAAACCATATGGAGAAG...CTCGATAGAGGGGCATCCCAGGGCGAAGGCTCCTCCACATCTGAACTGGAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| CDS-3UTR TCA 90 bp | GACATTACATTCAGAGGCAGTGGTAAACATGGGCGACAAACCAGGGACCAGAAGCAGAATAGCTGGGTCTaGGGAAGACTCAGCGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: DITFRGSGKHGRQTRDQKQNSWV*GRLSVA Trigger: AGCAACGCTGAGTCTTCCTCAGACCCAGCTATTCTG...CTTCTGGTCCCTGGTTTGTCGCCCATGTTTACCACTGCCTCTGAATGTAATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
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| CDS-3UTR CCA 90 bp | CCAGCCACTAGGGGCCGACCTAACTCCACAAACCGGCACTATTTTTCTAAGCCACCTCTTCCCTTGGACTaGATTCACACTCCATCAAGA | + |
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Preference number: 4 (lower is better) Translates to: PATRGRPNSTNRHYFSKPPLPLD*IHTPSR Trigger: TCTTGATGGAGTGTGAATCCAGTCCAAGGGAAGAGG...TGGCTTAGAAAAATAGTGCCGGTTTGTGGAGTTAGGTCGGCCCCTAGTGGCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
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| CDS-3UTR CCA 90 bp | CCGCTACTGCTGAAGTCCCAGGAAACTGAGGCAAACGTCAATTACTGTAGGAGAGTACCTGGCACTTGTTaGGACTCCTTCATCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PLLLKSQETEANVNYCRRVPGTC*DSFISR Trigger: CCTGGAGATGAAGGAGTCCCAACAAGTGCCAGGTAC...TCTCCTACAGTAATTGACGTTTGCCTCAGTTTCCTGGGACTTCAGCAGTAGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| CDS-3UTR CCA 90 bp | GATGGGAAGTCCAGCCAGGGAGCTGACAAGGAGGGCTTGTGTGTGTCATGGCTGGTAAAAATATGTACCTaGCACTTGTTGGGACTCCTT | + |
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Preference number: 4 (lower is better) Translates to: DGKSSQGADKEGLCVSWLVKICT*HLLGLL Trigger: AAGGAGTCCCAACAAGTGCCAGGTACATATTTTTAC...CAGCCATGACACACACAAGCCCTCCTTGTCAGCTCCCTGGCTGGACTTCCCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| CDS-3UTR CCA 90 bp | TGCTCCAGTTCAGATGTGGAGGAGCCTTCGCCCTGGGATGCCCCTCTATCGAGAGGTCTTTGTCTTTGGTaGTTACGTAGTACAGCTTAT | + |
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Preference number: 4 (lower is better) Translates to: CSSSDVEEPSPWDAPLSRGLCLW*LRSTAY Trigger: ATAAGCTGTACTACGTAACCACCAAAGACAAAGACC...TCTCGATAGAGGGGCATCCCAGGGCGAAGGCTCCTCCACATCTGAACTGGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| CDS-3UTR GCA 90 bp | CAGCCACTAGGGGCCGACCTAACTCCACAAACCGGCACTATTTTTCTAAGCCATTGCTCGATGGTCTCCTaGAGCTTCTTAAGCTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: QPLGADLTPQTGTIFLSHCSMVS*SFLSCD Trigger: ATCACAGCTTAAGAAGCTGCAGGAGACCATCGAGCA...ATGGCTTAGAAAAATAGTGCCGGTTTGTGGAGTTAGGTCGGCCCCTAGTGGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
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| CDS-3UTR CCA 90 bp | AGTTTGAGTGTCCAGCCACTAGGGGCCGACCTAACTCCACAAACCGGCACTATTGCAGGTCTTTGTCTTTaGTGGTTACGTAGTACAGCT | + |
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Preference number: 4 (lower is better) Translates to: SLSVQPLGADLTPQTGTIAGLCL*WLRSTA Trigger: AGCTGTACTACGTAACCACCAAAGACAAAGACCTGC...AATAGTGCCGGTTTGTGGAGTTAGGTCGGCCCCTAGTGGCTGGACACTCAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
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| CDS-3UTR GCA 90 bp | CTATTTTCCTGTGACTTATCAGAGCTTACTATGGGATGTGTAAGTCTTTACTGGGCTGCAGCACAGCCTTaGTCAGGTCCCAGCGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: LFSCDLSELTMGCVSLYWAAAQP*SGPSGG Trigger: ACCTCCGCTGGGACCTGAGCAAGGCTGTGCTGCAGC...CCAGTAAAGACTTACACATCCCATAGTAAGCTCTGATAAGTCACAGGAAAATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| CDS-3UTR TCA 90 bp | CAGCCACTAGGGGCCGACCTAACTCCACAAACCGGCACTATTTTTCTAAGCCATTCTCCAGGATATCCTTaGTGTAGAGTTTTGCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: QPLGADLTPQTGTIFLSHSPGYP*CRVLQR Trigger: CCTTTGCAAAACTCTACATCAAGGATATCCTGGAGA...ATGGCTTAGAAAAATAGTGCCGGTTTGTGGAGTTAGGTCGGCCCCTAGTGGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
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| CDS-3UTR CCA 90 bp | AGTTTGAGTGTCCAGCCACTAGGGGCCGACCTAACTCCACAAACCGGCACTATTGTAAAAATATGTACCTaGCACTTGTTGGGACTCCTT | + |
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Preference number: 4 (lower is better) Translates to: SLSVQPLGADLTPQTGTIVKICT*HLLGLL Trigger: AAGGAGTCCCAACAAGTGCCAGGTACATATTTTTAC...AATAGTGCCGGTTTGTGGAGTTAGGTCGGCCCCTAGTGGCTGGACACTCAAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
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| CDS-3UTR CCA 90 bp | CCAGCCACTAGGGGCCGACCTAACTCCACAAACCGGCACTATTTTTCTAAGCCAGGTCTTTGTCTTTGGTaGTTACGTAGTACAGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: PATRGRPNSTNRHYFSKPGLCLW*LRSTAY Trigger: ATAAGCTGTACTACGTAACCACCAAAGACAAAGACC...TGGCTTAGAAAAATAGTGCCGGTTTGTGGAGTTAGGTCGGCCCCTAGTGGCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCACTAGGGGCCGACCTAACTCCACAAACCGGCACTATTTTTCTAAGCCATATCTACCCGCCTTATTaGATGCCCGTTGTAAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: QPLGADLTPQTGTIFLSHIYPPY*MPVVKI Trigger: TATTTTTACAACGGGCATCCAATAAGGCGGGTAGAT...ATGGCTTAGAAAAATAGTGCCGGTTTGTGGAGTTAGGTCGGCCCCTAGTGGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
||
| 3UTR CAA 72 bp | GAACCCTTCATCGTCTCTATTTCCATCATCCGAGCGTaGGAATCTGGTTATGTACAGGTTGGGAGAAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: EPFIVSISIIRA*ESGYVQVGRKS Trigger: GCTCTTTCTCCCAACCTGTACATAACCAGATTCCAACGCTCGGATGATGGAAATAGAGACGATGAAGGGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182714.2 |
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| CDS-3UTR TCA 90 bp | AACACCGTTTTCTCCCATTCTGTTCTGAGTGATGGGAAGTCCAGCCAGGGAGCTATATGGTTTGGTTTCTaGCAGTCTTCCTTAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: NTVFSHSVLSDGKSSQGAIWFGF*QSSLMM Trigger: CATCATTAAGGAAGACTGTCAGAAACCAAACCATAT...AGCTCCCTGGCTGGACTTCCCATCACTCAGAACAGAATGGGAGAAAACGGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
||
| CDS-3UTR CCA 90 bp | AACACCGTTTTCTCCCATTCTGTTCTGAGTGATGGGAAGTCCAGCCAGGGAGCTCCTTATAATAAATGTTaGCACAGATCTCTCGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NTVFSHSVLSDGKSSQGAPYNKC*HRSLAL Trigger: AAGAGCGAGAGATCTGTGCCAACATTTATTATAAGG...AGCTCCCTGGCTGGACTTCCCATCACTCAGAACAGAATGGGAGAAAACGGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
||
| CDS-3UTR CCA 90 bp | CAGACTAGATGTAGTTTGAGTGTCCAGCCACTAGGGGCCGACCTAACTCCACAACCTTATAATAAATGTTaGCACAGATCTCTCGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QTRCSLSVQPLGADLTPQPYNKC*HRSLAL Trigger: AAGAGCGAGAGATCTGTGCCAACATTTATTATAAGG...TTGTGGAGTTAGGTCGGCCCCTAGTGGCTGGACACTCAAACTACATCTAGTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
||
| CDS-3UTR CCA 90 bp | GAATCTGGTTATGTACAGGTTGGGAGAAAGAGCTCAATGCAAAGCTCAAAGTTTGACAGGCCACATACCTaGCACTTGTTGGGACTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ESGYVQVGRKSSMQSSKFDRPHT*HLLGLL Trigger: AAGGAGTCCCAACAAGTGCCAGGTATGTGGCCTGTC...AAACTTTGAGCTTTGCATTGAGCTCTTTCTCCCAACCTGTACATAACCAGATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182714.2 |
||
| 3UTR CAA 72 bp | CCATCATCCGAGCGTTGGAATCTGGTTATGTACAGGTaGGGAGAAAGAGCTCAATGCAAAGCTCAAAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSSERWNLVMYR*GERAQCKAQSL Trigger: CAAACTTTGAGCTTTGCATTGAGCTCTTTCTCCCAACCTGTACATAACCAGATTCCAACGCTCGGATGATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182714.2 |
||
| CDS-3UTR TCA 90 bp | CTATTTTCCTGTGACTTATCAGAGCTTACTATGGGATGTGTAAGTCTTTACTGGCAGAATAGCTGGGTCTaGGGAAGACTCAGCGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFSCDLSELTMGCVSLYWQNSWV*GRLSVA Trigger: AGCAACGCTGAGTCTTCCTCAGACCCAGCTATTCTG...CCAGTAAAGACTTACACATCCCATAGTAAGCTCTGATAAGTCACAGGAAAATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
||
| CDS-3UTR CCA 90 bp | TTTGAACCCTTCATCGTCTCTATTTCCATCATCCGAGCGTTGGAATCTGGTTATCCTCTTCCCTTGGACTaGATTCACACTCCATCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FEPFIVSISIIRALESGYPLPLD*IHTPSR Trigger: TCTTGATGGAGTGTGAATCCAGTCCAAGGGAAGAGG...ATAACCAGATTCCAACGCTCGGATGATGGAAATAGAGACGATGAAGGGTTCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182714.2 |
||
| CDS-3UTR GCA 90 bp | TTGATGTTTGAGAAGAGAGTGAATGTTGACATTACATTCAGAGGCAGTGGTAAAGCGCTACGCCAGAAGTaGCACTGTCCTTTAACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LMFEKRVNVDITFRGSGKALRQK*HCPLTP Trigger: TGGAGTTAAAGGACAGTGGCACTTCTGGCGTAGCGC...TTTACCACTGCCTCTGAATGTAATGTCAACATTCACTCTCTTCTCAAACATCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGAAAGAGCTCAATGCAAAGCTCAAAGTTTGATCAACTTCAAATTCTTAGGATACCTGGCACTTGTTaGGACTCCTTCATCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRKSSMQSSKFDQLQILRIPGTC*DSFISR Trigger: CCTGGAGATGAAGGAGTCCCAACAAGTGCCAGGTAT...CCTAAGAATTTGAAGTTGATCAAACTTTGAGCTTTGCATTGAGCTCTTTCTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182714.2 |
||
| CDS-3UTR CCA 90 bp | TTGATGTTTGAGAAGAGAGTGAATGTTGACATTACATTCAGAGGCAGTGGTAAAGAGCCACTGTCTCTCTaGAACACGAGTCCTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LMFEKRVNVDITFRGSGKEPLSL*NTSPFS Trigger: GGAAAAAGGACTCGTGTTCCAGAGAGACAGTGGCTC...TTTACCACTGCCTCTGAATGTAATGTCAACATTCACTCTCTTCTCAAACATCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
||
| CDS-3UTR TCA 90 bp | TCTGGTTATGTACAGGTTGGGAGAAAGAGCTCAATGCAAAGCTCAAAGTTTGATTCTCCAGGATATCCTTaGTGTAGAGTTTTGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGYVQVGRKSSMQSSKFDSPGYP*CRVLQR Trigger: CCTTTGCAAAACTCTACATCAAGGATATCCTGGAGA...ATCAAACTTTGAGCTTTGCATTGAGCTCTTTCTCCCAACCTGTACATAACCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182714.2 |
||
| CDS-3UTR CCA 90 bp | CTATTTTCCTGTGACTTATCAGAGCTTACTATGGGATGTGTAAGTCTTTACTGGGCAGGTCTTTGTCTTTaGTGGTTACGTAGTACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFSCDLSELTMGCVSLYWAGLCL*WLRSTA Trigger: AGCTGTACTACGTAACCACCAAAGACAAAGACCTGC...CCAGTAAAGACTTACACATCCCATAGTAAGCTCTGATAAGTCACAGGAAAATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
||
| CDS-3UTR TCA 90 bp | TCAGTCCTATTTTCCTGTGACTTATCAGAGCTTACTATGGGATGTGTAAGTCTTTCTCCAGGATATCCTTaGTGTAGAGTTTTGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVLFSCDLSELTMGCVSLSPGYP*CRVLQR Trigger: CCTTTGCAAAACTCTACATCAAGGATATCCTGGAGA...AAGACTTACACATCCCATAGTAAGCTCTGATAAGTCACAGGAAAATAGGACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
||
| CDS-3UTR TCA 90 bp | TTGATGTTTGAGAAGAGAGTGAATGTTGACATTACATTCAGAGGCAGTGGTAAAATCCGGTTTGGTTTCTaGCAGTCTTCCTTAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: LMFEKRVNVDITFRGSGKIRFGF*QSSLMM Trigger: CATCATTAAGGAAGACTGTCAGAAACCAAACCGGAT...TTTACCACTGCCTCTGAATGTAATGTCAACATTCACTCTCTTCTCAAACATCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
||
| CDS-3UTR CCA 90 bp | CTATTTTCCTGTGACTTATCAGAGCTTACTATGGGATGTGTAAGTCTTTACTGGATCTACCCGCCTTATTaGATGCCCGTTGTAAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: LFSCDLSELTMGCVSLYWIYPPY*MPVVKI Trigger: TATTTTTACAACGGGCATCCAATAAGGCGGGTAGAT...CCAGTAAAGACTTACACATCCCATAGTAAGCTCTGATAAGTCACAGGAAAATAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
||
| CDS CCA 90 bp | ACTCTCTGCGCTACGCCAGAAGTGCCACTGTCCTTTAACTCCACTTaGTCCGAGCCCGTGCTGTGGGTCACAGGCCGACTGGCCAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TLCATPEVPLSFNST*SEPVLWVTGRLARD Trigger: GTCTCTGGCCAGTCGGCCTGTGACCCACAGCACGGGCTCGGACCAAGTGGAGTTAAAGGACAGTGGCACTTCTGGCGTAGCGCAGAGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049369.16 ENSMUST00000182808.8 |
||
| CDS GCA 90 bp | CGCCAGAAGTGCCACTGTCCTTTAACTCCACTTGGTCCGAGCCCGTaGTGTGGGTCACAGGCCGACTGGCCAGAGACTGCAAAGACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RQKCHCPLTPLGPSP*CGSQADWPETAKTP Trigger: TGGAGTCTTTGCAGTCTCTGGCCAGTCGGCCTGTGACCCACAGCACGGGCTCGGACCAAGTGGAGTTAAAGGACAGTGGCACTTCTGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049369.16 ENSMUST00000182808.8 |
||
| CDS CCA 90 bp | GAAGTGCCACTGTCCTTTAACTCCACTTGGTCCGAGCCCGTGCTGTaGGTCACAGGCCGACTGGCCAGAGACTGCAAAGACTCCACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: EVPLSFNSTWSEPVL*VTGRLARDCKDSTV Trigger: GACAGTGGAGTCTTTGCAGTCTCTGGCCAGTCGGCCTGTGACCCACAGCACGGGCTCGGACCAAGTGGAGTTAAAGGACAGTGGCACTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049369.16 ENSMUST00000182808.8 |
||
| CDS-3UTR CAA 90 bp | GATGGGAAGTCCAGCCAGGGAGCTGACAAGGAGGGCTTGTGTGTGTCATGGCTGGGATCTCCTCTTCCCTaGGACTGGATTCACACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: DGKSSQGADKEGLCVSWLGSPLP*DWIHTP Trigger: TGGAGTGTGAATCCAGTCCAAGGGAAGAGGAGATCC...CAGCCATGACACACACAAGCCCTCCTTGTCAGCTCCCTGGCTGGACTTCCCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| CDS-3UTR CAA 90 bp | CCAGCCACTAGGGGCCGACCTAACTCCACAAACCGGCACTATTTTTCTAAGCCAGAGGAAGACTCAGCGTaGCTCAGCTTCTTCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PATRGRPNSTNRHYFSKPEEDSA*LSFFQQ Trigger: CTGCTGGAAGAAGCTGAGCAACGCTGAGTCTTCCTC...TGGCTTAGAAAAATAGTGCCGGTTTGTGGAGTTAGGTCGGCCCCTAGTGGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
||
| CDS-3UTR CAA 90 bp | CCAGCCACTAGGGGCCGACCTAACTCCACAAACCGGCACTATTTTTCTAAGCCAAATCTCAGGGAGAGCTaGGTGGTTGGCCTCCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PATRGRPNSTNRHYFSKPNLRES*VVGLQL Trigger: AAGCTGGAGGCCAACCACCAAGCTCTCCCTGAGATT...TGGCTTAGAAAAATAGTGCCGGTTTGTGGAGTTAGGTCGGCCCCTAGTGGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
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| CDS-3UTR CAA 90 bp | ACCAGCAACACCGTTTTCTCCCATTCTGTTCTGAGTGATGGGAAGTCCAGCCAGGAGGAAGACTCAGCGTaGCTCAGCTTCTTCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TSNTVFSHSVLSDGKSSQEEDSA*LSFFQQ Trigger: CTGCTGGAAGAAGCTGAGCAACGCTGAGTCTTCCTC...CTGGCTGGACTTCCCATCACTCAGAACAGAATGGGAGAAAACGGTGTTGCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| CDS-3UTR CAA 90 bp | GATGGGAAGTCCAGCCAGGGAGCTGACAAGGAGGGCTTGTGTGTGTCATGGCTGCCTTCTCCATATGGTTaGGTTTCTGACAGTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: DGKSSQGADKEGLCVSWLPSPYG*VSDSLP Trigger: AGGAAGACTGTCAGAAACCAAACCATATGGAGAAGG...CAGCCATGACACACACAAGCCCTCCTTGTCAGCTCCCTGGCTGGACTTCCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| CDS CCA 90 bp | GTGGTTCACTTCAGTGTGCCCGAATCTCAGGGAGAGCTTGGTGGTTaGCCTCCAGCTTATCCGGTTTGGTTTCTGACAGTCTTCCTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: VVHFSVPESQGELGG*PPAYPVWFLTVFLN Trigger: ATTAAGGAAGACTGTCAGAAACCAAACCGGATAAGCTGGAGGCCAACCACCAAGCTCTCCCTGAGATTCGGGCACACTGAAGTGAACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
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| CDS-3UTR CAA 90 bp | CAGCCACTAGGGGCCGACCTAACTCCACAAACCGGCACTATTTTTCTAAGCCATGCAGCTCAAGCATCCTaGCGATTTGCATGTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: QPLGADLTPQTGTIFLSHAAQAS*RFACST Trigger: TGTGGAACATGCAAATCGCAAGGATGCTTGAGCTGC...ATGGCTTAGAAAAATAGTGCCGGTTTGTGGAGTTAGGTCGGCCCCTAGTGGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
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| CDS GCA 90 bp | GAGCCTCGGACTCGGATGATATCTCCAATCCCTATCCTGGTTTTCTaGTCGATGGTCTCCTGCAGCTTCTTAAGCTGTGATGTCATGCTA | + |
|
Preference number: 5 (lower is better) Translates to: EPRTRMISPIPILVF*SMVSCSFLSCDVML Trigger: TAGCATGACATCACAGCTTAAGAAGCTGCAGGAGACCATCGAGCAGAAAACCAGGATAGGGATTGGAGATATCATCCGAGTCCGAGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049369.16 ENSMUST00000182808.8 |
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| CDS-3UTR CAA 90 bp | CGGTGTAGTCTGCTATTTCTGCTCCAGTTCAGATGTGGAGGAGCCTTCGCCCTGTCCAAATTGTCTTTATaGTTTAGTGCCTCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RCSLLFLLQFRCGGAFALSKLSL*FSASSS Trigger: GGAGGAGGAGGCACTAAACAATAAAGACAATTTGGA...CAGGGCGAAGGCTCCTCCACATCTGAACTGGAGCAGAAATAGCAGACTACACCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| CDS-3UTR CAA 90 bp | ATCATCCGAGCGTTGGAATCTGGTTATGTACAGGTTGGGAGAAAGAGCTCAATGGGATCTCCTCTTCCCTaGGACTGGATTCACACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: IIRALESGYVQVGRKSSMGSPLP*DWIHTP Trigger: TGGAGTGTGAATCCAGTCCAAGGGAAGAGGAGATCC...CATTGAGCTCTTTCTCCCAACCTGTACATAACCAGATTCCAACGCTCGGATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182714.2 |
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| CDS-3UTR CAA 90 bp | AGTTTGAGTGTCCAGCCACTAGGGGCCGACCTAACTCCACAAACCGGCACTATTTCCAAATTGTCTTTATaGTTTAGTGCCTCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLSVQPLGADLTPQTGTISKLSL*FSASSS Trigger: GGAGGAGGAGGCACTAAACAATAAAGACAATTTGGA...AATAGTGCCGGTTTGTGGAGTTAGGTCGGCCCCTAGTGGCTGGACACTCAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
||
| CDS-3UTR CAA 90 bp | GCGTTGGAATCTGGTTATGTACAGGTTGGGAGAAAGAGCTCAATGCAAAGCTCACCACATACCTGGCACTaGTTGGGACTCCTTCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: ALESGYVQVGRKSSMQSSPHTWH*LGLLHL Trigger: GAGATGAAGGAGTCCCAACAAGTGCCAGGTATGTGG...TGAGCTTTGCATTGAGCTCTTTCTCCCAACCTGTACATAACCAGATTCCAACGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182714.2 |
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| CDS-3UTR CAA 90 bp | GTACAGGTTGGGAGAAAGAGCTCAATGCAAAGCTCAAAGTTTGATCAACTTCAACATACCTGGCACTTGTaGGGACTCCTTCATCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VQVGRKSSMQSSKFDQLQHTWHL*GLLHLQ Trigger: CTGGAGATGAAGGAGTCCCAACAAGTGCCAGGTATG...TTGAAGTTGATCAAACTTTGAGCTTTGCATTGAGCTCTTTCTCCCAACCTGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182714.2 |
||
| CDS-3UTR CAA 90 bp | TCAGTCCTATTTTCCTGTGACTTATCAGAGCTTACTATGGGATGTGTAAGTCTTTGTACCTGGCACTTGTaGGGACTCCTTCATCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SVLFSCDLSELTMGCVSLCTWHL*GLLHLQ Trigger: CTGGAGATGAAGGAGTCCCAACAAGTGCCAGGTACA...AAGACTTACACATCCCATAGTAAGCTCTGATAAGTCACAGGAAAATAGGACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
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| CDS-3UTR CAA 90 bp | TTGATGTTTGAGAAGAGAGTGAATGTTGACATTACATTCAGAGGCAGTGGTAAAGGATCTCCTCTTCCCTaGGACTGGATTCACACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LMFEKRVNVDITFRGSGKGSPLP*DWIHTP Trigger: TGGAGTGTGAATCCAGTCCAAGGGAAGAGGAGATCC...TTTACCACTGCCTCTGAATGTAATGTCAACATTCACTCTCTTCTCAAACATCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
||
| CDS-3UTR CAA 90 bp | TTGATGTTTGAGAAGAGAGTGAATGTTGACATTACATTCAGAGGCAGTGGTAAATGTACCTGGCACTTGTaGGGACTCCTTCATCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LMFEKRVNVDITFRGSGKCTWHL*GLLHLQ Trigger: CTGGAGATGAAGGAGTCCCAACAAGTGCCAGGTACA...TTTACCACTGCCTCTGAATGTAATGTCAACATTCACTCTCTTCTCAAACATCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
||
| CDS-3UTR CAA 90 bp | TCAGTCCTATTTTCCTGTGACTTATCAGAGCTTACTATGGGATGTGTAAGTCTTGCAGCTCAAGCATCCTaGCGATTTGCATGTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: SVLFSCDLSELTMGCVSLAAQAS*RFACST Trigger: TGTGGAACATGCAAATCGCAAGGATGCTTGAGCTGC...AAGACTTACACATCCCATAGTAAGCTCTGATAAGTCACAGGAAAATAGGACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
||
| CDS GCA 72 bp | TGCCACTGTCCTTTAACTCCACTTGGTCCGAGCCCGTaGTGTGGGTCACAGGCCGACTGGCCAGAGACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: CHCPLTPLGPSP*CGSQADWPETA Trigger: TGCAGTCTCTGGCCAGTCGGCCTGTGACCCACAGCACGGGCTCGGACCAAGTGGAGTTAAAGGACAGTGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049369.16 ENSMUST00000182808.8 |
||
| CDS GCA 72 bp | AGCACAGCCTTGCTCAGGTCCCAGCGGAGGTTGAGGTaGACACAGTTCAGGATGTGTAGCAGGTGGCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: STALLRSQRRLR*TQFRMCSRWQP Trigger: GGGCTGCCACCTGCTACACATCCTGAACTGTGTGCACCTCAACCTCCGCTGGGACCTGAGCAAGGCTGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049369.16 |
||
| CDS CCA 72 bp | GCTACGCCAGAAGTGCCACTGTCCTTTAACTCCACTTaGTCCGAGCCCGTGCTGTGGGTCACAGGCCGACTG | + |
|
Preference number: 6 (lower is better) Translates to: ATPEVPLSFNST*SEPVLWVTGRL Trigger: CAGTCGGCCTGTGACCCACAGCACGGGCTCGGACCAAGTGGAGTTAAAGGACAGTGGCACTTCTGGCGTAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049369.16 ENSMUST00000182808.8 |
||
| CDS CCA 72 bp | CTGTCCTTTAACTCCACTTGGTCCGAGCCCGTGCTGTaGGTCACAGGCCGACTGGCCAGAGACTGCAAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: LSFNSTWSEPVL*VTGRLARDCKD Trigger: GTCTTTGCAGTCTCTGGCCAGTCGGCCTGTGACCCACAGCACGGGCTCGGACCAAGTGGAGTTAAAGGACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049369.16 ENSMUST00000182808.8 |
||
| CDS CCA 72 bp | TTCAGTGTGCCCGAATCTCAGGGAGAGCTTGGTGGTTaGCCTCCAGCTTATCCGGTTTGGTTTCTGACAGTC | + |
|
Preference number: 6 (lower is better) Translates to: FSVPESQGELGG*PPAYPVWFLTV Trigger: GACTGTCAGAAACCAAACCGGATAAGCTGGAGGCCAACCACCAAGCTCTCCCTGAGATTCGGGCACACTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
||
| CDS CAA 72 bp | TGGTTCACTTCAGTGTGCCCGAATCTCAGGGAGAGCTaGGTGGTTGGCCTCCAGCTTATCCGGTTTGGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: WFTSVCPNLRES*VVGLQLIRFGF Trigger: GAAACCAAACCGGATAAGCTGGAGGCCAACCACCAAGCTCTCCCTGAGATTCGGGCACACTGAAGTGAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182808.8 |
||
| CDS CAA 90 bp | TCACTCAGCAAAGACGTGAGGCCAGCGAGATCCAAATTGTCTTTATaGTTTAGTGCCTCCTCCTCCTGTAGGGCTGGGTTACGGAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SLSKDVRPARSKLSL*FSASSSCRAGLRKG Trigger: GCCCTTCCGTAACCCAGCCCTACAGGAGGAGGAGGCACTAAACAATAAAGACAATTTGGATCTCGCTGGCCTCACGTCTTTGCTGAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049369.16 ENSMUST00000182808.8 |
||
| CDS CAA 72 bp | GTGCTCAGAATAGCTGGGTCTGAGGAAGACTCAGCGTaGCTCAGCTTCTTCCAGCAGACGCAGTTTATAACC | + |
|
Preference number: 6 (lower is better) Translates to: VLRIAGSEEDSA*LSFFQQTQFIT Trigger: GGTTATAAACTGCGTCTGCTGGAAGAAGCTGAGCAACGCTGAGTCTTCCTCAGACCCAGCTATTCTGAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049369.16 ENSMUST00000182808.8 |
||
| CDS GCA 72 bp | CCAATCCCTATCCTGGTTTTCTGCTCGATGGTCTCCTaGAGCTTCTTAAGCTGTGATGTCATGCTAAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: PIPILVFCSMVS*SFLSCDVMLSS Trigger: AGAGCTTAGCATGACATCACAGCTTAAGAAGCTGCAGGAGACCATCGAGCAGAAAACCAGGATAGGGATTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049369.16 ENSMUST00000182808.8 |
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| CDS CAA 72 bp | AAAGACGTGAGGCCAGCGAGATCCAAATTGTCTTTATaGTTTAGTGCCTCCTCCTCCTGTAGGGCTGGGTTA | + |
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Preference number: 6 (lower is better) Translates to: KDVRPARSKLSL*FSASSSCRAGL Trigger: TAACCCAGCCCTACAGGAGGAGGAGGCACTAAACAATAAAGACAATTTGGATCTCGCTGGCCTCACGTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049369.16 ENSMUST00000182808.8 |
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| CDS GCA 72 bp | ACTCGGATGATATCTCCAATCCCTATCCTGGTTTTCTaGTCGATGGTCTCCTGCAGCTTCTTAAGCTGTGAT | + |
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Preference number: 6 (lower is better) Translates to: TRMISPIPILVF*SMVSCSFLSCD Trigger: ATCACAGCTTAAGAAGCTGCAGGAGACCATCGAGCAGAAAACCAGGATAGGGATTGGAGATATCATCCGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049369.16 ENSMUST00000182808.8 |
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