Pregenerated sensors for STMN4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022044Ensembl transcript IDs: ENSMUST00000074523.13, ENSMUST00000118426.8, ENSMUST00000120229.8, ENSMUST00000121955.8
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACCCGCTGCAGGGCAGGTCTCACTCCATCCAGACGGGCTTGTCCTaGTGGCCCTGCAGCCACCACCCCGCCAGGACTCTGCCCTTCACT | + |
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Preference number: 1 (lower is better) Translates to: HPLQGRSHSIQTGLS*WPCSHHPARTLPFT Trigger: AGTGAAGGGCAGAGTCCTGGCGGGGTGGTGGCTGCAGGGCCAGCAGGACAAGCCCGTCTGGATGGAGTGAGACCTGCCCTGCAGCGGGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| 3UTR CCA 90 bp | CCCCCGAACCCCAGTGCTGGGAGAGCAGCCAGCAGCCGAGGCTGCTaGAACCAGGTTGCTACGGGAGCTGTCCGGCTGTCCTGGAAACTT | + |
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Preference number: 1 (lower is better) Translates to: PPNPSAGRAASSRGC*NQVATGAVRLSWKL Trigger: AAGTTTCCAGGACAGCCGGACAGCTCCCGTAGCAACCTGGTTCCAGCAGCCTCGGCTGCTGGCTGCTCTCCCAGCACTGGGGTTCGGGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| 3UTR GCA 90 bp | CAGTGCTGGGAGAGCAGCCAGCAGCCGAGGCTGCTGGAACCAGGTTaGTACGGGAGCTGTCCGGCTGTCCTGGAAACTTCCTTGGCCTCT | + |
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Preference number: 1 (lower is better) Translates to: QCWESSQQPRLLEPG*YGSCPAVLETSLAS Trigger: AGAGGCCAAGGAAGTTTCCAGGACAGCCGGACAGCTCCCGTAGCAACCTGGTTCCAGCAGCCTCGGCTGCTGGCTGCTCTCCCAGCACTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| 3UTR CCA 90 bp | CGAGGCTGCTGGAACCAGGTTGCTACGGGAGCTGTCCGGCTGTCCTaGAAACTTCCTTGGCCTCTGGGCTTTACCTGGAGGCCTCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: RGCWNQVATGAVRLS*KLPWPLGFTWRPLP Trigger: AGGAAGAGGCCTCCAGGTAAAGCCCAGAGGCCAAGGAAGTTTCCAGGACAGCCGGACAGCTCCCGTAGCAACCTGGTTCCAGCAGCCTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118426.8 ENSMUST00000121955.8 |
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| 3UTR CCA 90 bp | GCTGTCCGGCTGTCCTGGAAACTTCCTTGGCCTCTGGGCTTTACCTaGAGGCCTCTTCCTTCAGCTCCTTGTTTTTCCGCACCTCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: AVRLSWKLPWPLGFT*RPLPSAPCFSAPPL Trigger: CAGAGGAGGTGCGGAAAAACAAGGAGCTGAAGGAAGAGGCCTCCAGGTAAAGCCCAGAGGCCAAGGAAGTTTCCAGGACAGCCGGACAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118426.8 ENSMUST00000121955.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGCAGGTCTCACTCCATCCAGACGGGCTTGTCCTGCTGGCCCTGCAGCCACCGTCCAGGCAGAGCCATaGAAAGCGGGGGCCTTGGCC | + |
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Preference number: 2 (lower is better) Translates to: RAGLTPSRRACPAGPAATVQAEP*KAGALA Trigger: GGCCAAGGCCCCCGCTTTTCATGGCTCTGCCTGGAC...GGTGGCTGCAGGGCCAGCAGGACAAGCCCGTCTGGATGGAGTGAGACCTGCCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| 3UTR CAA 90 bp | CCAGTGCTGGGAGAGCAGCCAGCAGCCGAGGCTGCTGGAACCAGGTaGCTACGGGAGCTGTCCGGCTGTCCTGGAAACTTCCTTGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: PVLGEQPAAEAAGTR*LRELSGCPGNFLGL Trigger: GAGGCCAAGGAAGTTTCCAGGACAGCCGGACAGCTCCCGTAGCAACCTGGTTCCAGCAGCCTCGGCTGCTGGCTGCTCTCCCAGCACTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTCTCTCCACTCGGAACCTGGAGGCCGGATGTCCAGGCAGAGCCATGAAAAGCCCGAACCCCAGTGCTaGGAGAGCAGCCAGCAGCCG | + |
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Preference number: 2 (lower is better) Translates to: SSLHSEPGGRMSRQSHEKPEPQC*ESSQQP Trigger: CGGCTGCTGGCTGCTCTCCCAGCACTGGGGTTCGGG...CTTTTCATGGCTCTGCCTGGACATCCGGCCTCCAGGTTCCGAGTGGAGAGAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGCAGGTCTCACTCCATCCAGACGGGCTTGTCCTGCTGGCCCTGCAGCCACCAACTTCCTTGGCCTCTaGGCTTTACCTGGAGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: RAGLTPSRRACPAGPAATNFLGL*ALPGGL Trigger: GAGGCCTCCAGGTAAAGCCCAGAGGCCAAGGAAGTT...GGTGGCTGCAGGGCCAGCAGGACAAGCCCGTCTGGATGGAGTGAGACCTGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118426.8 ENSMUST00000121955.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTGGAACCAGGTTGCTACGGGAGCTGTCCGGCTGTCCTGGAAACTTCCTTGGCGCACCTCCTCTGCGTaGTTGTCCATGGGACGAGGC | + |
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Preference number: 2 (lower is better) Translates to: CWNQVATGAVRLSWKLPWRTSSA*LSMGRG Trigger: GCCTCGTCCCATGGACAAGCACGCAGAGGAGGTGCG...CCAAGGAAGTTTCCAGGACAGCCGGACAGCTCCCGTAGCAACCTGGTTCCAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118426.8 ENSMUST00000121955.8 |
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| 3UTR-3UTR CCA 90 bp | AACCTGGAGGCCGGATGTCCAGGCAGAGCCATGAAAAGCGGGGGCCTTGGCCCAAACTTCCTTGGCCTCTaGGCTTTACCTGGAGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: NLEAGCPGRAMKSGGLGPNFLGL*ALPGGL Trigger: GAGGCCTCCAGGTAAAGCCCAGAGGCCAAGGAAGTT...TGGGCCAAGGCCCCCGCTTTTCATGGCTCTGCCTGGACATCCGGCCTCCAGGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118426.8 ENSMUST00000121955.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAAGATGACAATGAACAGACGCACACAGACCTTATCCCACCCGCTGCAGGGCCAGACGGGCTTGTCCTaGTGGCCCTGCAGCCACCAC | + |
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Preference number: 2 (lower is better) Translates to: QKMTMNRRTQTLSHPLQGQTGLS*WPCSHH Trigger: GTGGTGGCTGCAGGGCCAGCAGGACAAGCCCGTCTG...GCCCTGCAGCGGGTGGGATAAGGTCTGTGTGCGTCTGTTCATTGTCATCTTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000121955.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCTCTCCACTCGGAACCTGGAGGCCGGATGTCCAGGCAGAGCCATGAAAAGCTTTCCGCACCTCCTCTaGGTGCTTGTCCATGGGACG | + |
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Preference number: 2 (lower is better) Translates to: LLSTRNLEAGCPGRAMKSFPHLL*VLVHGT Trigger: CGTCCCATGGACAAGCACGCAGAGGAGGTGCGGAAA...GCTTTTCATGGCTCTGCCTGGACATCCGGCCTCCAGGTTCCGAGTGGAGAGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118426.8 ENSMUST00000121955.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCCTTGGCCCAAGTCTGCAGTCAGTGGACAGTGTCACAATGTCCTTGGGCTCGCTGTCCGGCTGTCCTaGAAACTTCCTTGGCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: GPWPKSAVSGQCHNVLGLAVRLS*KLPWPL Trigger: CAGAGGCCAAGGAAGTTTCCAGGACAGCCGGACAGC...GAGCCCAAGGACATTGTGACACTGTCCACTGACTGCAGACTTGGGCCAAGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTCATCTTCTCTCCACTCGGAACCTGGAGGCCGGATGTCCAGGCAGAGCCATGCTGTCCGGCTGTCCTaGAAACTTCCTTGGCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: FSSSLHSEPGGRMSRQSHAVRLS*KLPWPL Trigger: CAGAGGCCAAGGAAGTTTCCAGGACAGCCGGACAGC...ATGGCTCTGCCTGGACATCCGGCCTCCAGGTTCCGAGTGGAGAGAAGATGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| 3UTR-3UTR CCA 90 bp | CAATGTCCTTGGGCTCATCTTCACCTCCCTCTTCCACACGCTCACTGTCCCCTCGCTGTCCGGCTGTCCTaGAAACTTCCTTGGCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: QCPWAHLHLPLPHAHCPLAVRLS*KLPWPL Trigger: CAGAGGCCAAGGAAGTTTCCAGGACAGCCGGACAGC...GAGGGGACAGTGAGCGTGTGGAAGAGGGAGGTGAAGATGAGCCCAAGGACATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAGCCATGAAAAGCGGGGGCCTTGGCCCAAGTCTGCAGTCAGTGGACAGTGTCCTCTGGGCTTTACCTaGAGGCCTCTTCCTTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: QSHEKRGPWPKSAVSGQCPLGFT*RPLPSA Trigger: AGCTGAAGGAAGAGGCCTCCAGGTAAAGCCCAGAGG...ACACTGTCCACTGACTGCAGACTTGGGCCAAGGCCCCCGCTTTTCATGGCTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118426.8 ENSMUST00000121955.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTACCCCAGTTCTCATCTTCTCTCCACTCGGAACCTGGAGGCCGGATGTCCAGCTGTCCGGCTGTCCTaGAAACTTCCTTGGCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: FYPSSHLLSTRNLEAGCPAVRLS*KLPWPL Trigger: CAGAGGCCAAGGAAGTTTCCAGGACAGCCGGACAGC...TGGACATCCGGCCTCCAGGTTCCGAGTGGAGAGAAGATGAGAACTGGGGTAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| 3UTR-3UTR GCA 90 bp | GTCTGCAGTCAGTGGACAGTGTCACAATGTCCTTGGGCTCATCTTCACCTCCCTTTTCCGCACCTCCTCTaGGTGCTTGTCCATGGGACG | + |
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Preference number: 2 (lower is better) Translates to: VCSQWTVSQCPWAHLHLPFPHLL*VLVHGT Trigger: CGTCCCATGGACAAGCACGCAGAGGAGGTGCGGAAA...AGGGAGGTGAAGATGAGCCCAAGGACATTGTGACACTGTCCACTGACTGCAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118426.8 ENSMUST00000121955.8 |
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| 3UTR-3UTR TCA 90 bp | ATGACAATGAACAGACGCACACAGACCTTATCCCACCCGCTGCAGGGCAGGTCTCTCTGCCCTTCACTCTaGACTTCTACCCCAGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: MTMNRRTQTLSHPLQGRSLCPSL*TSTPVL Trigger: GAGAACTGGGGTAGAAGTTCAGAGTGAAGGGCAGAG...AGACCTGCCCTGCAGCGGGTGGGATAAGGTCTGTGTGCGTCTGTTCATTGTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGCAGGTCTCACTCCATCCAGACGGGCTTGTCCTGCTGGCCCTGCAGCCACCATAGGATGGCTTCACTaGTCAATCTTTTACATGTAC | + |
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Preference number: 2 (lower is better) Translates to: RAGLTPSRRACPAGPAATIGWLH*SIFYMY Trigger: GTACATGTAAAAGATTGACCAGTGAAGCCATCCTAT...GGTGGCTGCAGGGCCAGCAGGACAAGCCCGTCTGGATGGAGTGAGACCTGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTCATCTTCTCTCCACTCGGAACCTGGAGGCCGGATGTCCAGGCAGAGCCATGTGTCACAATGTCCTTaGGCTCATCTTCACCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: FSSSLHSEPGGRMSRQSHVSQCP*AHLHLP Trigger: AGGGAGGTGAAGATGAGCCCAAGGACATTGTGACAC...ATGGCTCTGCCTGGACATCCGGCCTCCAGGTTCCGAGTGGAGAGAAGATGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCTCTCCACTCGGAACCTGGAGGCCGGATGTCCAGGCAGAGCCATGAAAAGCCAAGTCTGCAGTCAGTaGACAGTGTCACAATGTCCT | + |
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Preference number: 2 (lower is better) Translates to: LLSTRNLEAGCPGRAMKSQVCSQ*TVSQCP Trigger: AGGACATTGTGACACTGTCCACTGACTGCAGACTTG...GCTTTTCATGGCTCTGCCTGGACATCCGGCCTCCAGGTTCCGAGTGGAGAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| 3UTR-3UTR TCA 90 bp | CAAAAGATGACAATGAACAGACGCACACAGACCTTATCCCACCCGCTGCAGGGCCTCTGCCCTTCACTCTaGACTTCTACCCCAGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: QKMTMNRRTQTLSHPLQGLCPSL*TSTPVL Trigger: GAGAACTGGGGTAGAAGTTCAGAGTGAAGGGCAGAG...GCCCTGCAGCGGGTGGGATAAGGTCTGTGTGCGTCTGTTCATTGTCATCTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000121955.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGATGACAATGAACAGACGCACACAGACCTTATCCCACCCGCTGCAGGGCAGTCCTGGAAACTTCCTTaGCCTCTGGGCTTTACCTGG | + |
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Preference number: 2 (lower is better) Translates to: KDDNEQTHTDLIPPAAGQSWKLP*PLGFTW Trigger: CCAGGTAAAGCCCAGAGGCCAAGGAAGTTTCCAGGA...CTGCCCTGCAGCGGGTGGGATAAGGTCTGTGTGCGTCTGTTCATTGTCATCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118426.8 ENSMUST00000121955.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGTGGACAGTGTCACAATGTCCTTGGGCTCATCTTCACCTCCCTCTTCCACATCCTGGAAACTTCCTTaGCCTCTGGGCTTTACCTGG | + |
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Preference number: 2 (lower is better) Translates to: SVDSVTMSLGSSSPPSSTSWKLP*PLGFTW Trigger: CCAGGTAAAGCCCAGAGGCCAAGGAAGTTTCCAGGA...TGTGGAAGAGGGAGGTGAAGATGAGCCCAAGGACATTGTGACACTGTCCACTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118426.8 ENSMUST00000121955.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCTGAACTTCTACCCCAGTTCTCATCTTCTCTCCACTCGGAACCTGGAGGCCCAAGTCTGCAGTCAGTaGACAGTGTCACAATGTCCT | + |
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Preference number: 2 (lower is better) Translates to: TLNFYPSSHLLSTRNLEAQVCSQ*TVSQCP Trigger: AGGACATTGTGACACTGTCCACTGACTGCAGACTTG...GGCCTCCAGGTTCCGAGTGGAGAGAAGATGAGAACTGGGGTAGAAGTTCAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAGCCATGAAAAGCGGGGGCCTTGGCCCAAGTCTGCAGTCAGTGGACAGTGTATAGGATGGCTTCACTaGTCAATCTTTTACATGTAC | + |
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Preference number: 2 (lower is better) Translates to: QSHEKRGPWPKSAVSGQCIGWLH*SIFYMY Trigger: GTACATGTAAAAGATTGACCAGTGAAGCCATCCTAT...ACACTGTCCACTGACTGCAGACTTGGGCCAAGGCCCCCGCTTTTCATGGCTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTCTCTCCACTCGGAACCTGGAGGCCGGATGTCCAGGCAGAGCCATGAAAAGATAGGATGGCTTCACTaGTCAATCTTTTACATGTAC | + |
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Preference number: 2 (lower is better) Translates to: SSLHSEPGGRMSRQSHEKIGWLH*SIFYMY Trigger: GTACATGTAAAAGATTGACCAGTGAAGCCATCCTAT...CTTTTCATGGCTCTGCCTGGACATCCGGCCTCCAGGTTCCGAGTGGAGAGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAATAGGATGGCTTCACTGGTCAATCTTTTACATGTACAAACACCAAAAGCACTGCGTGCTTGTCCATaGGACGAGGCCACCGATCGG | + |
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Preference number: 2 (lower is better) Translates to: TNRMASLVNLLHVQTPKALRACP*DEATDR Trigger: CCGATCGGTGGCCTCGTCCCATGGACAAGCACGCAG...TGCTTTTGGTGTTTGTACATGTAAAAGATTGACCAGTGAAGCCATCCTATTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118426.8 ENSMUST00000121955.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCTGAACTTCTACCCCAGTTCTCATCTTCTCTCCACTCGGAACCTGGAGGCCATAGGATGGCTTCACTaGTCAATCTTTTACATGTAC | + |
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Preference number: 2 (lower is better) Translates to: TLNFYPSSHLLSTRNLEAIGWLH*SIFYMY Trigger: GTACATGTAAAAGATTGACCAGTGAAGCCATCCTAT...GGCCTCCAGGTTCCGAGTGGAGAGAAGATGAGAACTGGGGTAGAAGTTCAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| 3UTR CCA 72 bp | GGCAGGTCTCACTCCATCCAGACGGGCTTGTCCTGCTaGCCCTGCAGCCACCACCCCGCCAGGACTCTGCCC | + |
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Preference number: 3 (lower is better) Translates to: GRSHSIQTGLSC*PCSHHPARTLP Trigger: GGGCAGAGTCCTGGCGGGGTGGTGGCTGCAGGGCCAGCAGGACAAGCCCGTCTGGATGGAGTGAGACCTGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| 3UTR CCA 72 bp | CCCAGTGCTGGGAGAGCAGCCAGCAGCCGAGGCTGCTaGAACCAGGTTGCTACGGGAGCTGTCCGGCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: PSAGRAASSRGC*NQVATGAVRLS Trigger: GGACAGCCGGACAGCTCCCGTAGCAACCTGGTTCCAGCAGCCTCGGCTGCTGGCTGCTCTCCCAGCACTGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| 3UTR GCA 72 bp | AACCCCAGTGCTGGGAGAGCAGCCAGCAGCCGAGGCTaGTGGAACCAGGTTGCTACGGGAGCTGTCCGGCTG | + |
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Preference number: 3 (lower is better) Translates to: NPSAGRAASSRG*WNQVATGAVRL Trigger: CAGCCGGACAGCTCCCGTAGCAACCTGGTTCCAGCAGCCTCGGCTGCTGGCTGCTCTCCCAGCACTGGGGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| 3UTR GCA 72 bp | TCTCACTCCATCCAGACGGGCTTGTCCTGCTGGCCCTaGAGCCACCACCCCGCCAGGACTCTGCCCTTCACT | + |
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Preference number: 3 (lower is better) Translates to: SHSIQTGLSCWP*SHHPARTLPFT Trigger: AGTGAAGGGCAGAGTCCTGGCGGGGTGGTGGCTGCAGGGCCAGCAGGACAAGCCCGTCTGGATGGAGTGAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| 3UTR TCA 72 bp | CTCGGAACCTGGAGGCCGGATGTCCAGGCAGAGCCATaGAAAGCGGGGGCCTTGGCCCAAGTCTGCAGTCAG | + |
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Preference number: 3 (lower is better) Translates to: LGTWRPDVQAEP*KAGALAQVCSQ Trigger: CTGACTGCAGACTTGGGCCAAGGCCCCCGCTTTTCATGGCTCTGCCTGGACATCCGGCCTCCAGGTTCCGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| 3UTR-3UTR CAA 90 bp | AGGGCAGGTCTCACTCCATCCAGACGGGCTTGTCCTGCTGGCCCTGCAGCCACCAGTGTCACAATGTCCTaGGGCTCATCTTCACCTCCC | + |
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Preference number: 3 (lower is better) Translates to: RAGLTPSRRACPAGPAATSVTMS*GSSSPP Trigger: GGGAGGTGAAGATGAGCCCAAGGACATTGTGACACT...GGTGGCTGCAGGGCCAGCAGGACAAGCCCGTCTGGATGGAGTGAGACCTGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| 3UTR CCA 72 bp | TGGAACCAGGTTGCTACGGGAGCTGTCCGGCTGTCCTaGAAACTTCCTTGGCCTCTGGGCTTTACCTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: WNQVATGAVRLS*KLPWPLGFTWR Trigger: CCTCCAGGTAAAGCCCAGAGGCCAAGGAAGTTTCCAGGACAGCCGGACAGCTCCCGTAGCAACCTGGTTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118426.8 ENSMUST00000121955.8 |
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| 3UTR-3UTR CAA 90 bp | CAAAAGATGACAATGAACAGACGCACACAGACCTTATCCCACCCGCTGCAGGGCTCCATCCAGACGGGCTaGTCCTGCTGGCCCTGCAGC | + |
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Preference number: 3 (lower is better) Translates to: QKMTMNRRTQTLSHPLQGSIQTG*SCWPCS Trigger: GCTGCAGGGCCAGCAGGACAAGCCCGTCTGGATGGA...GCCCTGCAGCGGGTGGGATAAGGTCTGTGTGCGTCTGTTCATTGTCATCTTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000121955.8 |
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| 3UTR CCA 72 bp | CGGATGTCCAGGCAGAGCCATGAAAAGCGGGGGCCTTaGCCCAAGTCTGCAGTCAGTGGACAGTGTCACAAT | + |
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Preference number: 3 (lower is better) Translates to: RMSRQSHEKRGP*PKSAVSGQCHN Trigger: ATTGTGACACTGTCCACTGACTGCAGACTTGGGCCAAGGCCCCCGCTTTTCATGGCTCTGCCTGGACATCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| 3UTR-3UTR CAA 90 bp | CTTCTCTCCACTCGGAACCTGGAGGCCGGATGTCCAGGCAGAGCCATGAAAAGCAGTGTCACAATGTCCTaGGGCTCATCTTCACCTCCC | + |
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Preference number: 3 (lower is better) Translates to: LLSTRNLEAGCPGRAMKSSVTMS*GSSSPP Trigger: GGGAGGTGAAGATGAGCCCAAGGACATTGTGACACT...GCTTTTCATGGCTCTGCCTGGACATCCGGCCTCCAGGTTCCGAGTGGAGAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| 3UTR-3UTR CAA 90 bp | CCCCAGTTCTCATCTTCTCTCCACTCGGAACCTGGAGGCCGGATGTCCAGGCAGTCTTCCTTCAGCTCCTaGTTTTTCCGCACCTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: PQFSSSLHSEPGGRMSRQSSFSS*FFRTSS Trigger: AGAGGAGGTGCGGAAAAACAAGGAGCTGAAGGAAGA...CTGCCTGGACATCCGGCCTCCAGGTTCCGAGTGGAGAGAAGATGAGAACTGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118426.8 ENSMUST00000121955.8 |
||
| 3UTR CCA 72 bp | CAAGTCTGCAGTCAGTGGACAGTGTCACAATGTCCTTaGGCTCATCTTCACCTCCCTCTTCCACACGCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: QVCSQWTVSQCP*AHLHLPLPHAH Trigger: GTGAGCGTGTGGAAGAGGGAGGTGAAGATGAGCCCAAGGACATTGTGACACTGTCCACTGACTGCAGACTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| 3UTR CCA 72 bp | CTGTCCTGGAAACTTCCTTGGCCTCTGGGCTTTACCTaGAGGCCTCTTCCTTCAGCTCCTTGTTTTTCCGCA | + |
|
Preference number: 3 (lower is better) Translates to: LSWKLPWPLGFT*RPLPSAPCFSA Trigger: TGCGGAAAAACAAGGAGCTGAAGGAAGAGGCCTCCAGGTAAAGCCCAGAGGCCAAGGAAGTTTCCAGGACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118426.8 ENSMUST00000121955.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTGTCACAATGTCCTTGGGCTCATCTTCACCTCCCTCTTCCACACGCTCACAGTGTCACAATGTCCTaGGGCTCATCTTCACCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: TVSQCPWAHLHLPLPHAHSVTMS*GSSSPP Trigger: GGGAGGTGAAGATGAGCCCAAGGACATTGTGACACT...GTGAGCGTGTGGAAGAGGGAGGTGAAGATGAGCCCAAGGACATTGTGACACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCCCAAGTCTGCAGTCAGTGGACAGTGTCACAATGTCCTTGGGCTCATCTTCAAGTGTCACAATGTCCTaGGGCTCATCTTCACCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: GPSLQSVDSVTMSLGSSSSVTMS*GSSSPP Trigger: GGGAGGTGAAGATGAGCCCAAGGACATTGTGACACT...TGAAGATGAGCCCAAGGACATTGTGACACTGTCCACTGACTGCAGACTTGGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTCTGAACTTCTACCCCAGTTCTCATCTTCTCTCCACTCGGAACCTGGAGGCCTCTTCCTTCAGCTCCTaGTTTTTCCGCACCTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: TLNFYPSSHLLSTRNLEASSFSS*FFRTSS Trigger: AGAGGAGGTGCGGAAAAACAAGGAGCTGAAGGAAGA...GGCCTCCAGGTTCCGAGTGGAGAGAAGATGAGAACTGGGGTAGAAGTTCAGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118426.8 ENSMUST00000121955.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGAGAGCAGCCAGCAGCCGAGGCTGCTGGAACCAGGTTGCTACGGGAGCTGGGCGGCTCCTTCTCTTaGAGCCGCTCCAACATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGEQPAAEAAGTRLLRELGGSFS*SRSNMA Trigger: TGCCATGTTGGAGCGGCTGCAAGAGAAGGAGCCGCC...CAGCTCCCGTAGCAACCTGGTTCCAGCAGCCTCGGCTGCTGGCTGCTCTCCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118426.8 ENSMUST00000121955.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCAGGTCTCACTCCATCCAGACGGGCTTGTCCTGCTGGCCCTGCAGCCACCTTGGACTCCATCTTCTaGGCCAGCTTCTCTTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RAGLTPSRRACPAGPAATLDSIF*ASFSFA Trigger: GGCAAAAGAGAAGCTGGCCCAGAAGATGGAGTCCAA...GGTGGCTGCAGGGCCAGCAGGACAAGCCCGTCTGGATGGAGTGAGACCTGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGGCAGAGCCATGAAAAGCGGGGGCCTTGGCCCAAGTCTGCAGTCAGTGGACTCTCCAGTCAGCACTaGCTTTCCGCTGGCTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SRQSHEKRGPWPKSAVSGLSSQH*LSAGFD Trigger: GTCAAAGCCAGCGGAAAGGCAGTGCTGACTGGAGAG...TCCACTGACTGCAGACTTGGGCCAAGGCCCCCGCTTTTCATGGCTCTGCCTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| CDS-3UTR GCA 90 bp | CCTTCAGCTCCTTGTTTTTCCGCACCTCCTCTGCGTGCTTGTCCATGGGACGAGGGCGGCTCCTTCTCTTaGAGCCGCTCCAACATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSAPCFSAPPLRACPWDEGGSFS*SRSNMA Trigger: TGCCATGTTGGAGCGGCTGCAAGAGAAGGAGCCGCC...CTCGTCCCATGGACAAGCACGCAGAGGAGGTGCGGAAAAACAAGGAGCTGAAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118426.8 ENSMUST00000121955.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGCCGGATGTCCAGGCAGAGCCATGAAAAGCGGGGGCCTTGGCCCAAGTCTATGACTTCAAAGGACTaGCCCGAGGTGCACTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GGRMSRQSHEKRGPWPKSMTSKD*PEVHLF Trigger: GAACAAGTGCACCTCGGGCCAGTCCTTTGAAGTCAT...AGACTTGGGCCAAGGCCCCCGCTTTTCATGGCTCTGCCTGGACATCCGGCCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGGCAGAGCCATGAAAAGCGGGGGCCTTGGCCCAAGTCTGCAGTCAGTGGATGGGTCTCGCCGTCTTaGGAGGGAGGCATTAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: SRQSHEKRGPWPKSAVSGWVSPS*EGGIKL Trigger: GAGTTTAATGCCTCCCTCCCAAGACGGCGAGACCCA...TCCACTGACTGCAGACTTGGGCCAAGGCCCCCGCTTTTCATGGCTCTGCCTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| CDS-3UTR CCA 90 bp | AGGCAGAGCCATGAAAAGCGGGGGCCTTGGCCCAAGTCTGCAGTCAGTGGACAGTGGGTCTCGCCGTCTTaGGAGGGAGGCATTAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: RQSHEKRGPWPKSAVSGQWVSPS*EGGIKL Trigger: GAGTTTAATGCCTCCCTCCCAAGACGGCGAGACCCA...CTGTCCACTGACTGCAGACTTGGGCCAAGGCCCCCGCTTTTCATGGCTCTGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTGCTGGAACCAGGTTGCTACGGGAGCTGTCCGGCTGTCCTGGAAACTTCCAACATGGCAGCCAGATaGGCCTCCCGGTTCTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: RLLEPGCYGSCPAVLETSNMAAR*ASRFSL Trigger: TAAGGAGAACCGGGAGGCCCATCTGGCTGCCATGTT...GGAAGTTTCCAGGACAGCCGGACAGCTCCCGTAGCAACCTGGTTCCAGCAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCCATGAAAAGCGGGGGCCTTGGCCCAAGTCTGCAGTCAGTGGACAGTGTCTGGGTCTCGCCGTCTTaGGAGGGAGGCATTAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: RAMKSGGLGPSLQSVDSVWVSPS*EGGIKL Trigger: GAGTTTAATGCCTCCCTCCCAAGACGGCGAGACCCA...GACACTGTCCACTGACTGCAGACTTGGGCCAAGGCCCCCGCTTTTCATGGCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| CDS-3UTR TCA 90 bp | TGGAACCAGGTTGCTACGGGAGCTGTCCGGCTGTCCTGGAAACTTCCTTGGCCTAAGGTGGCTTCAAGATaGCTTCAAAGGACTGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: WNQVATGAVRLSWKLPWPKVASR*LQRTGP Trigger: CGGGCCAGTCCTTTGAAGTCATCTTGAAGCCACCTT...AGGCCAAGGAAGTTTCCAGGACAGCCGGACAGCTCCCGTAGCAACCTGGTTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| CDS-3UTR CCA 90 bp | GGGCCTTGGCCCAAGTCTGCAGTCAGTGGACAGTGTCACAATGTCCTTGGGCTCCCCGGTTCTCCTTATTaGACTCCATCTTCTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GPWPKSAVSGQCHNVLGLPGSPY*TPSSGP Trigger: TGGCCCAGAAGATGGAGTCCAATAAGGAGAACCGGG...GAGCCCAAGGACATTGTGACACTGTCCACTGACTGCAGACTTGGGCCAAGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCATCTTCTCTCCACTCGGAACCTGGAGGCCGGATGTCCAGGCAGAGCCATAACATGGCAGCCAGATaGGCCTCCCGGTTCTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: FSSSLHSEPGGRMSRQSHNMAAR*ASRFSL Trigger: TAAGGAGAACCGGGAGGCCCATCTGGCTGCCATGTT...ATGGCTCTGCCTGGACATCCGGCCTCCAGGTTCCGAGTGGAGAGAAGATGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCTCTCCACTCGGAACCTGGAGGCCGGATGTCCAGGCAGAGCCATGAAAAGAAGGTGGCTTCAAGATaGCTTCAAAGGACTGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSLHSEPGGRMSRQSHEKKVASR*LQRTGP Trigger: CGGGCCAGTCCTTTGAAGTCATCTTGAAGCCACCTT...CTTTTCATGGCTCTGCCTGGACATCCGGCCTCCAGGTTCCGAGTGGAGAGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| CDS-3UTR GCA 90 bp | CACAATGTCCTTGGGCTCATCTTCACCTCCCTCTTCCACACGCTCACTGTCCCCTGCTTGTCCTTCTCTTaGAGCCGCTCCAACATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HNVLGLIFTSLFHTLTVPCLSFS*SRSNMA Trigger: TGCCATGTTGGAGCGGCTGCAAGAGAAGGACAAGCA...GGGGACAGTGAGCGTGTGGAAGAGGGAGGTGAAGATGAGCCCAAGGACATTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074523.13 ENSMUST00000120229.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCCATGAAAAGCGGGGGCCTTGGCCCAAGTCTGCAGTCAGTGGACAGTGTCATGACTTCAAAGGACTaGCCCGAGGTGCACTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RAMKSGGLGPSLQSVDSVMTSKD*PEVHLF Trigger: GAACAAGTGCACCTCGGGCCAGTCCTTTGAAGTCAT...GACACTGTCCACTGACTGCAGACTTGGGCCAAGGCCCCCGCTTTTCATGGCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| CDS-3UTR CCA 90 bp | TTCTACCCCAGTTCTCATCTTCTCTCCACTCGGAACCTGGAGGCCGGATGTCCATGGGTCTCGCCGTCTTaGGAGGGAGGCATTAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: FYPSSHLLSTRNLEAGCPWVSPS*EGGIKL Trigger: GAGTTTAATGCCTCCCTCCCAAGACGGCGAGACCCA...TGGACATCCGGCCTCCAGGTTCCGAGTGGAGAGAAGATGAGAACTGGGGTAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| CDS-3UTR CCA 90 bp | AACCAGGTTGCTACGGGAGCTGTCCGGCTGTCCTGGAAACTTCCTTGGCCTCTGAGGAGTTCAGCTTCCTaGTACTTCCTTCGCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NQVATGAVRLSWKLPWPLRSSAS*YFLRSS Trigger: AGAGGAGCGAAGGAAGTACCAGGAAGCTGAACTCCT...CAGAGGCCAAGGAAGTTTCCAGGACAGCCGGACAGCTCCCGTAGCAACCTGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| CDS-3UTR CCA 90 bp | AACCAGGTTGCTACGGGAGCTGTCCGGCTGTCCTGGAAACTTCCTTGGCCTCTGTTGGACTCCATCTTCTaGGCCAGCTTCTCTTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NQVATGAVRLSWKLPWPLLDSIF*ASFSFA Trigger: GGCAAAAGAGAAGCTGGCCCAGAAGATGGAGTCCAA...CAGAGGCCAAGGAAGTTTCCAGGACAGCCGGACAGCTCCCGTAGCAACCTGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTGTTTTTCCGCACCTCCTCTGCGTGCTTGTCCATGGGACGAGGCCACCGATTGGACTCCATCTTCTaGGCCAGCTTCTCTTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLFFRTSSACLSMGRGHRLDSIF*ASFSFA Trigger: GGCAAAAGAGAAGCTGGCCCAGAAGATGGAGTCCAA...TCGGTGGCCTCGTCCCATGGACAAGCACGCAGAGGAGGTGCGGAAAAACAAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118426.8 ENSMUST00000121955.8 |
||
| CDS-3UTR CCA 90 bp | CAATGTCCTTGGGCTCATCTTCACCTCCCTCTTCCACACGCTCACTGTCCCCTCCCCGGTTCTCCTTATTaGACTCCATCTTCTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QCPWAHLHLPLPHAHCPLPGSPY*TPSSGP Trigger: TGGCCCAGAAGATGGAGTCCAATAAGGAGAACCGGG...GAGGGGACAGTGAGCGTGTGGAAGAGGGAGGTGAAGATGAGCCCAAGGACATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| CDS-3UTR TCA 90 bp | ATGACAATGAACAGACGCACACAGACCTTATCCCACCCGCTGCAGGGCAGGTCTCCTTTCCGCTGGCTTTaGCCTTTCCTCCTACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: MTMNRRTQTLSHPLQGRSPFRWL*PFLLHC Trigger: ACAGTGTAGGAGGAAAGGTCAAAGCCAGCGGAAAGG...AGACCTGCCCTGCAGCGGGTGGGATAAGGTCTGTGTGCGTCTGTTCATTGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| CDS-3UTR GCA 90 bp | GAGGCCGGATGTCCAGGCAGAGCCATGAAAAGCGGGGGCCTTGGCCCAAGTCTGGGCCAGCTTCTCTTTTaGCATCTTGATGAAGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: EAGCPGRAMKSGGLGPSLGQLLF*HLDEVI Trigger: AATAACTTCATCAAGATGGCAAAAGAGAAGCTGGCC...CAGACTTGGGCCAAGGCCCCCGCTTTTCATGGCTCTGCCTGGACATCCGGCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTCACAATGTCCTTGGGCTCATCTTCACCTCCCTCTTCCACACGCTCACTGCTCTCCAGTCAGCACTaGCTTTCCGCTGGCTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SVTMSLGSSSPPSSTRSLLSSQH*LSAGFD Trigger: GTCAAAGCCAGCGGAAAGGCAGTGCTGACTGGAGAG...CAGTGAGCGTGTGGAAGAGGGAGGTGAAGATGAGCCCAAGGACATTGTGACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| CDS-3UTR CCA 90 bp | CACAATGTCCTTGGGCTCATCTTCACCTCCCTCTTCCACACGCTCACTGTCCCCTTGGACTCCATCTTCTaGGCCAGCTTCTCTTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HNVLGLIFTSLFHTLTVPLDSIF*ASFSFA Trigger: GGCAAAAGAGAAGCTGGCCCAGAAGATGGAGTCCAA...GGGGACAGTGAGCGTGTGGAAGAGGGAGGTGAAGATGAGCCCAAGGACATTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| CDS-3UTR CCA 90 bp | TTCTACCCCAGTTCTCATCTTCTCTCCACTCGGAACCTGGAGGCCGGATGTCCACCCGGTTCTCCTTATTaGACTCCATCTTCTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FYPSSHLLSTRNLEAGCPPGSPY*TPSSGP Trigger: TGGCCCAGAAGATGGAGTCCAATAAGGAGAACCGGG...TGGACATCCGGCCTCCAGGTTCCGAGTGGAGAGAAGATGAGAACTGGGGTAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| CDS-3UTR CCA 90 bp | AAAGATGACAATGAACAGACGCACACAGACCTTATCCCACCCGCTGCAGGGCAGAACATGGCAGCCAGATaGGCCTCCCGGTTCTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: KDDNEQTHTDLIPPAAGQNMAAR*ASRFSL Trigger: TAAGGAGAACCGGGAGGCCCATCTGGCTGCCATGTT...CTGCCCTGCAGCGGGTGGGATAAGGTCTGTGTGCGTCTGTTCATTGTCATCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| CDS-3UTR CCA 90 bp | CCCAAGTCTGCAGTCAGTGGACAGTGTCACAATGTCCTTGGGCTCATCTTCACCAACATGGCAGCCAGATaGGCCTCCCGGTTCTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: PKSAVSGQCHNVLGLIFTNMAAR*ASRFSL Trigger: TAAGGAGAACCGGGAGGCCCATCTGGCTGCCATGTT...GGTGAAGATGAGCCCAAGGACATTGTGACACTGTCCACTGACTGCAGACTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| 3UTR CAA 72 bp | CCAAGTCTGCAGTCAGTGGACAGTGTCACAATGTCCTaGGGCTCATCTTCACCTCCCTCTTCCACACGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSLQSVDSVTMS*GSSSPPSSTRS Trigger: TGAGCGTGTGGAAGAGGGAGGTGAAGATGAGCCCAAGGACATTGTGACACTGTCCACTGACTGCAGACTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| CDS-3UTR GCA 90 bp | CCCAAGTCTGCAGTCAGTGGACAGTGTCACAATGTCCTTGGGCTCATCTTCACCTGCTTGTCCTTCTCTTaGAGCCGCTCCAACATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PKSAVSGQCHNVLGLIFTCLSFS*SRSNMA Trigger: TGCCATGTTGGAGCGGCTGCAAGAGAAGGACAAGCA...GGTGAAGATGAGCCCAAGGACATTGTGACACTGTCCACTGACTGCAGACTTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074523.13 ENSMUST00000120229.8 |
||
| CDS-3UTR CCA 90 bp | AAGATGACAATGAACAGACGCACACAGACCTTATCCCACCCGCTGCAGGGCAGGATGACTTCAAAGGACTaGCCCGAGGTGCACTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KMTMNRRTQTLSHPLQGRMTSKD*PEVHLF Trigger: GAACAAGTGCACCTCGGGCCAGTCCTTTGAAGTCAT...CCTGCCCTGCAGCGGGTGGGATAAGGTCTGTGTGCGTCTGTTCATTGTCATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| CDS-3UTR CCA 90 bp | ATGACAATGAACAGACGCACACAGACCTTATCCCACCCGCTGCAGGGCAGGTCTAGGAGTTCAGCTTCCTaGTACTTCCTTCGCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MTMNRRTQTLSHPLQGRSRSSAS*YFLRSS Trigger: AGAGGAGCGAAGGAAGTACCAGGAAGCTGAACTCCT...AGACCTGCCCTGCAGCGGGTGGGATAAGGTCTGTGTGCGTCTGTTCATTGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| CDS-3UTR TCA 90 bp | TTGGCCCAAGTCTGCAGTCAGTGGACAGTGTCACAATGTCCTTGGGCTCATCTTAAGGTGGCTTCAAGATaGCTTCAAAGGACTGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LAQVCSQWTVSQCPWAHLKVASR*LQRTGP Trigger: CGGGCCAGTCCTTTGAAGTCATCTTGAAGCCACCTT...AAGATGAGCCCAAGGACATTGTGACACTGTCCACTGACTGCAGACTTGGGCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTCACAATGTCCTTGGGCTCATCTTCACCTCCCTCTTCCACACGCTCACTGATGACTTCAAAGGACTaGCCCGAGGTGCACTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVTMSLGSSSPPSSTRSLMTSKD*PEVHLF Trigger: GAACAAGTGCACCTCGGGCCAGTCCTTTGAAGTCAT...CAGTGAGCGTGTGGAAGAGGGAGGTGAAGATGAGCCCAAGGACATTGTGACACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCTCTCCACTCGGAACCTGGAGGCCGGATGTCCAGGCAGAGCCATGAAAAGCCCGTCAAAGGAAGGTaGCTTCAAGATGACTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSLHSEPGGRMSRQSHEKPVKGR*LQDDFK Trigger: TTTGAAGTCATCTTGAAGCCACCTTCCTTTGACGGG...CTTTTCATGGCTCTGCCTGGACATCCGGCCTCCAGGTTCCGAGTGGAGAGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| CDS-3UTR TCA 90 bp | CTTCACTCTGAACTTCTACCCCAGTTCTCATCTTCTCTCCACTCGGAACCTGGAAAGGTGGCTTCAAGATaGCTTCAAAGGACTGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LHSELLPQFSSSLHSEPGKVASR*LQRTGP Trigger: CGGGCCAGTCCTTTGAAGTCATCTTGAAGCCACCTT...TCCAGGTTCCGAGTGGAGAGAAGATGAGAACTGGGGTAGAAGTTCAGAGTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGGAACCAGGTTGCTACGGGAGCTGTCCGGCTGTCCTGGAAACTTCCTTGGGGCCAGCTTCTCTTTTaGCATCTTGATGAAGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: CWNQVATGAVRLSWKLPWGQLLF*HLDEVI Trigger: AATAACTTCATCAAGATGGCAAAAGAGAAGCTGGCC...CCAAGGAAGTTTCCAGGACAGCCGGACAGCTCCCGTAGCAACCTGGTTCCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| CDS-3UTR GCA 90 bp | CCTTCAGCTCCTTGTTTTTCCGCACCTCCTCTGCGTGCTTGTCCATGGGACGAGCAGGTCTACTGTATCTaGCTGTTCTCTTCTTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: PSAPCFSAPPLRACPWDEQVYCI*LFSSFS Trigger: AGAGAAAGAAGAGAACAGGCAGATACAGTAGACCTG...CTCGTCCCATGGACAAGCACGCAGAGGAGGTGCGGAAAAACAAGGAGCTGAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121955.8 |
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| CDS-3UTR CCA 90 bp | TCAGTGGACAGTGTCACAATGTCCTTGGGCTCATCTTCACCTCCCTCTTCCACAAGGAGTTCAGCTTCCTaGTACTTCCTTCGCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: SVDSVTMSLGSSSPPSSTRSSAS*YFLRSS Trigger: AGAGGAGCGAAGGAAGTACCAGGAAGCTGAACTCCT...TGTGGAAGAGGGAGGTGAAGATGAGCCCAAGGACATTGTGACACTGTCCACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| CDS-3UTR GCA 90 bp | ATGACAATGAACAGACGCACACAGACCTTATCCCACCCGCTGCAGGGCAGGTCTCAGGTCTACTGTATCTaGCTGTTCTCTTCTTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: MTMNRRTQTLSHPLQGRSQVYCI*LFSSFS Trigger: AGAGAAAGAAGAGAACAGGCAGATACAGTAGACCTG...AGACCTGCCCTGCAGCGGGTGGGATAAGGTCTGTGTGCGTCTGTTCATTGTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| CDS-3UTR GCA 90 bp | AAGATGACAATGAACAGACGCACACAGACCTTATCCCACCCGCTGCAGGGCAGGGGCCAGCTTCTCTTTTaGCATCTTGATGAAGTTATT | + |
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Preference number: 4 (lower is better) Translates to: KMTMNRRTQTLSHPLQGRGQLLF*HLDEVI Trigger: AATAACTTCATCAAGATGGCAAAAGAGAAGCTGGCC...CCTGCCCTGCAGCGGGTGGGATAAGGTCTGTGTGCGTCTGTTCATTGTCATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| CDS-3UTR CCA 90 bp | CATGATGATCAAAAGATGACAATGAACAGACGCACACAGACCTTATCCCACCCGCCCGGTTCTCCTTATTaGACTCCATCTTCTGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: HDDQKMTMNRRTQTLSHPPGSPY*TPSSGP Trigger: TGGCCCAGAAGATGGAGTCCAATAAGGAGAACCGGG...CGGGTGGGATAAGGTCTGTGTGCGTCTGTTCATTGTCATCTTTTGATCATCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000121955.8 |
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| CDS-3UTR CCA 90 bp | CATGATGATCAAAAGATGACAATGAACAGACGCACACAGACCTTATCCCACCCGAGGAGTTCAGCTTCCTaGTACTTCCTTCGCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: HDDQKMTMNRRTQTLSHPRSSAS*YFLRSS Trigger: AGAGGAGCGAAGGAAGTACCAGGAAGCTGAACTCCT...CGGGTGGGATAAGGTCTGTGTGCGTCTGTTCATTGTCATCTTTTGATCATCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000121955.8 |
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| CDS-3UTR CAA 90 bp | GCAGCCGAGGCTGCTGGAACCAGGTTGCTACGGGAGCTGTCCGGCTGTCCTGGAAGGCGGCTCCTTCTCTaGCAGCCGCTCCAACATGGC | + |
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Preference number: 5 (lower is better) Translates to: AAEAAGTRLLRELSGCPGRRLLL*QPLQHG Trigger: GCCATGTTGGAGCGGCTGCAAGAGAAGGAGCCGCCT...TCCAGGACAGCCGGACAGCTCCCGTAGCAACCTGGTTCCAGCAGCCTCGGCTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118426.8 ENSMUST00000121955.8 |
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| CDS CCA 90 bp | GCAGGCGGCTCCTTCTCTTGCAGCCGCTCCAACATGGCAGCCAGATaGGCCTCCCGGTTCTCCTTATTGGACTCCATCTTCTGGGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: AGGSFSCSRSNMAAR*ASRFSLLDSIFWAS Trigger: GCTGGCCCAGAAGATGGAGTCCAATAAGGAGAACCGGGAGGCCCATCTGGCTGCCATGTTGGAGCGGCTGCAAGAGAAGGAGCCGCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118426.8 ENSMUST00000121955.8 |
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| CDS-3UTR CAA 90 bp | CAGCCGAGGCTGCTGGAACCAGGTTGCTACGGGAGCTGTCCGGCTGTCCTGGAAGTGCTTGTCCTTCTCTaGCAGCCGCTCCAACATGGC | + |
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Preference number: 5 (lower is better) Translates to: QPRLLEPGCYGSCPAVLEVLVLL*QPLQHG Trigger: GCCATGTTGGAGCGGCTGCAAGAGAAGGACAAGCAC...TTCCAGGACAGCCGGACAGCTCCCGTAGCAACCTGGTTCCAGCAGCCTCGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074523.13 ENSMUST00000120229.8 |
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| CDS CCA 90 bp | GCGTGCTTGTCCTTCTCTTGCAGCCGCTCCAACATGGCAGCCAGATaGGCCTCCCGGTTCTCCTTATTGGACTCCATCTTCTGGGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: ACLSFSCSRSNMAAR*ASRFSLLDSIFWAS Trigger: GCTGGCCCAGAAGATGGAGTCCAATAAGGAGAACCGGGAGGCCCATCTGGCTGCCATGTTGGAGCGGCTGCAAGAGAAGGACAAGCACGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074523.13 ENSMUST00000120229.8 |
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| CDS-3UTR CAA 90 bp | CCCCAGTTCTCATCTTCTCTCCACTCGGAACCTGGAGGCCGGATGTCCAGGCAGTGGCCCGAGGTGCACTaGTTCAGCTCGATGACTTCC | + |
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Preference number: 5 (lower is better) Translates to: PQFSSSLHSEPGGRMSRQWPEVH*FSSMTS Trigger: GGAAGTCATCGAGCTGAACAAGTGCACCTCGGGCCA...CTGCCTGGACATCCGGCCTCCAGGTTCCGAGTGGAGAGAAGATGAGAACTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| CDS CCA 90 bp | GCACCTCCTCTGCGTGCTTGTCCTTCTCTTGCAGCCGCTCCAACATaGCAGCCAGATGGGCCTCCCGGTTCTCCTTATTGGACTCCATCT | + |
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Preference number: 5 (lower is better) Translates to: APPLRACPSLAAAPT*QPDGPPGSPYWTPS Trigger: AGATGGAGTCCAATAAGGAGAACCGGGAGGCCCATCTGGCTGCCATGTTGGAGCGGCTGCAAGAGAAGGACAAGCACGCAGAGGAGGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074523.13 ENSMUST00000120229.8 |
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| CDS-3UTR CAA 90 bp | TGGAACCAGGTTGCTACGGGAGCTGTCCGGCTGTCCTGGAAACTTCCTTGGCCTTGGCCCGAGGTGCACTaGTTCAGCTCGATGACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: WNQVATGAVRLSWKLPWPWPEVH*FSSMTS Trigger: GGAAGTCATCGAGCTGAACAAGTGCACCTCGGGCCA...AGGCCAAGGAAGTTTCCAGGACAGCCGGACAGCTCCCGTAGCAACCTGGTTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| CDS-3UTR CAA 90 bp | AGGCAGAGCCATGAAAAGCGGGGGCCTTGGCCCAAGTCTGCAGTCAGTGGACAGGCCTTTCCGCTGGCTTaGACCTTTCCTCCTACACTG | + |
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Preference number: 5 (lower is better) Translates to: RQSHEKRGPWPKSAVSGQAFPLA*TFPPTL Trigger: CAGTGTAGGAGGAAAGGTCAAAGCCAGCGGAAAGGC...CTGTCCACTGACTGCAGACTTGGGCCAAGGCCCCCGCTTTTCATGGCTCTGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| CDS-3UTR CAA 90 bp | ATGACAATGAACAGACGCACACAGACCTTATCCCACCCGCTGCAGGGCAGGTCTAGGCGGCTCCTTCTCTaGCAGCCGCTCCAACATGGC | + |
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Preference number: 5 (lower is better) Translates to: MTMNRRTQTLSHPLQGRSRRLLL*QPLQHG Trigger: GCCATGTTGGAGCGGCTGCAAGAGAAGGAGCCGCCT...AGACCTGCCCTGCAGCGGGTGGGATAAGGTCTGTGTGCGTCTGTTCATTGTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118426.8 ENSMUST00000121955.8 |
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| CDS-3UTR CAA 90 bp | ATGACAATGAACAGACGCACACAGACCTTATCCCACCCGCTGCAGGGCAGGTCTACCTCCTCTGCGTGCTaGTCCTTCTCTTGCAGCCGC | + |
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Preference number: 5 (lower is better) Translates to: MTMNRRTQTLSHPLQGRSTSSAC*SFSCSR Trigger: GCGGCTGCAAGAGAAGGACAAGCACGCAGAGGAGGT...AGACCTGCCCTGCAGCGGGTGGGATAAGGTCTGTGTGCGTCTGTTCATTGTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074523.13 ENSMUST00000120229.8 |
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| CDS-3UTR CAA 90 bp | AGAGCCATGAAAAGCGGGGGCCTTGGCCCAAGTCTGCAGTCAGTGGACAGTGTCGCCTTTCCGCTGGCTTaGACCTTTCCTCCTACACTG | + |
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Preference number: 5 (lower is better) Translates to: RAMKSGGLGPSLQSVDSVAFPLA*TFPPTL Trigger: CAGTGTAGGAGGAAAGGTCAAAGCCAGCGGAAAGGC...GACACTGTCCACTGACTGCAGACTTGGGCCAAGGCCCCCGCTTTTCATGGCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| CDS-3UTR CAA 90 bp | TTCTACCCCAGTTCTCATCTTCTCTCCACTCGGAACCTGGAGGCCGGATGTCCATGGCCCGAGGTGCACTaGTTCAGCTCGATGACTTCC | + |
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Preference number: 5 (lower is better) Translates to: FYPSSHLLSTRNLEAGCPWPEVH*FSSMTS Trigger: GGAAGTCATCGAGCTGAACAAGTGCACCTCGGGCCA...TGGACATCCGGCCTCCAGGTTCCGAGTGGAGAGAAGATGAGAACTGGGGTAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| CDS-3UTR CAA 90 bp | AAGATGACAATGAACAGACGCACACAGACCTTATCCCACCCGCTGCAGGGCAGGGTGCTTGTCCTTCTCTaGCAGCCGCTCCAACATGGC | + |
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Preference number: 5 (lower is better) Translates to: KMTMNRRTQTLSHPLQGRVLVLL*QPLQHG Trigger: GCCATGTTGGAGCGGCTGCAAGAGAAGGACAAGCAC...CCTGCCCTGCAGCGGGTGGGATAAGGTCTGTGTGCGTCTGTTCATTGTCATCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074523.13 ENSMUST00000120229.8 |
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| CDS-3UTR CAA 90 bp | AAAGATGACAATGAACAGACGCACACAGACCTTATCCCACCCGCTGCAGGGCAGTGGCCCGAGGTGCACTaGTTCAGCTCGATGACTTCC | + |
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Preference number: 5 (lower is better) Translates to: KDDNEQTHTDLIPPAAGQWPEVH*FSSMTS Trigger: GGAAGTCATCGAGCTGAACAAGTGCACCTCGGGCCA...CTGCCCTGCAGCGGGTGGGATAAGGTCTGTGTGCGTCTGTTCATTGTCATCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| CDS-3UTR CAA 90 bp | TTGGCCCAAGTCTGCAGTCAGTGGACAGTGTCACAATGTCCTTGGGCTCATCTTACCTCCTCTGCGTGCTaGTCCTTCTCTTGCAGCCGC | + |
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Preference number: 5 (lower is better) Translates to: LAQVCSQWTVSQCPWAHLTSSAC*SFSCSR Trigger: GCGGCTGCAAGAGAAGGACAAGCACGCAGAGGAGGT...AAGATGAGCCCAAGGACATTGTGACACTGTCCACTGACTGCAGACTTGGGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074523.13 ENSMUST00000120229.8 |
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| CDS-3UTR CAA 90 bp | CAAAAGATGACAATGAACAGACGCACACAGACCTTATCCCACCCGCTGCAGGGCTCCCGGTTCTCCTTATaGGACTCCATCTTCTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: QKMTMNRRTQTLSHPLQGSRFSL*DSIFWA Trigger: GGCCCAGAAGATGGAGTCCAATAAGGAGAACCGGGA...GCCCTGCAGCGGGTGGGATAAGGTCTGTGTGCGTCTGTTCATTGTCATCTTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000121955.8 |
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| CDS-3UTR CAA 90 bp | TCTTCTCTCCACTCGGAACCTGGAGGCCGGATGTCCAGGCAGAGCCATGAAAAGTCTTCCTTCAGCTCCTaGTTTTTCCGCACCTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: SSLHSEPGGRMSRQSHEKSSFSS*FFRTSS Trigger: AGAGGAGGTGCGGAAAAACAAGGAGCTGAAGGAAGA...CTTTTCATGGCTCTGCCTGGACATCCGGCCTCCAGGTTCCGAGTGGAGAGAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074523.13 ENSMUST00000120229.8 |
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| CDS CCA 90 bp | TCTTGGGAGGGAGGCATTAAACTCAGGCACCCCGTCAAAGGAAGGTaGCTTCAAGATGACTTCAAAGGACTGGCCCGAGGTGCACTTGTT | + |
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Preference number: 5 (lower is better) Translates to: SWEGGIKLRHPVKGR*LQDDFKGLARGALV Trigger: AACAAGTGCACCTCGGGCCAGTCCTTTGAAGTCATCTTGAAGCCACCTTCCTTTGACGGGGTGCCTGAGTTTAATGCCTCCCTCCCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| CDS CCA 90 bp | GCAGCCAGATGGGCCTCCCGGTTCTCCTTATTGGACTCCATCTTCTaGGCCAGCTTCTCTTTTGCCATCTTGATGAAGTTATTGTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AARWASRFSLLDSIF*ASFSFAILMKLLFS Trigger: AGAAAACAATAACTTCATCAAGATGGCAAAAGAGAAGCTGGCCCAGAAGATGGAGTCCAATAAGGAGAACCGGGAGGCCCATCTGGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| CDS-3UTR CAA 90 bp | ACAAATAGGATGGCTTCACTGGTCAATCTTTTACATGTACAAACACCAAAAGCATCTTCCTTCAGCTCCTaGTTTTTCCGCACCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TNRMASLVNLLHVQTPKASSFSS*FFRTSS Trigger: AGAGGAGGTGCGGAAAAACAAGGAGCTGAAGGAAGA...TGCTTTTGGTGTTTGTACATGTAAAAGATTGACCAGTGAAGCCATCCTATTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000074523.13 ENSMUST00000120229.8 |
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| CDS CCA 72 bp | CAGCAGGCGGCTCCTTCTCTTGCAGCCGCTCCAACATaGCAGCCAGATGGGCCTCCCGGTTCTCCTTATTGG | + |
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Preference number: 6 (lower is better) Translates to: QQAAPSLAAAPT*QPDGPPGSPYW Trigger: CCAATAAGGAGAACCGGGAGGCCCATCTGGCTGCCATGTTGGAGCGGCTGCAAGAGAAGGAGCCGCCTGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118426.8 ENSMUST00000121955.8 |
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| CDS CCA 72 bp | CTGCGTGCTTGTCCTTCTCTTGCAGCCGCTCCAACATaGCAGCCAGATGGGCCTCCCGGTTCTCCTTATTGG | + |
|
Preference number: 6 (lower is better) Translates to: LRACPSLAAAPT*QPDGPPGSPYW Trigger: CCAATAAGGAGAACCGGGAGGCCCATCTGGCTGCCATGTTGGAGCGGCTGCAAGAGAAGGACAAGCACGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074523.13 ENSMUST00000120229.8 |
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| CDS CCA 72 bp | TCCTTCTCTTGCAGCCGCTCCAACATGGCAGCCAGATaGGCCTCCCGGTTCTCCTTATTGGACTCCATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SFSCSRSNMAAR*ASRFSLLDSIF Trigger: GAAGATGGAGTCCAATAAGGAGAACCGGGAGGCCCATCTGGCTGCCATGTTGGAGCGGCTGCAAGAGAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| CDS CAA 90 bp | AGCCGCTCCAACATGGCAGCCAGATGGGCCTCCCGGTTCTCCTTATaGGACTCCATCTTCTGGGCCAGCTTCTCTTTTGCCATCTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: SRSNMAARWASRFSL*DSIFWASFSFAILM Trigger: CATCAAGATGGCAAAAGAGAAGCTGGCCCAGAAGATGGAGTCCAATAAGGAGAACCGGGAGGCCCATCTGGCTGCCATGTTGGAGCGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| CDS CCA 72 bp | ACATGGCAGCCAGATGGGCCTCCCGGTTCTCCTTATTaGACTCCATCTTCTGGGCCAGCTTCTCTTTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TWQPDGPPGSPY*TPSSGPASLLP Trigger: TGGCAAAAGAGAAGCTGGCCCAGAAGATGGAGTCCAATAAGGAGAACCGGGAGGCCCATCTGGCTGCCATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| CDS CAA 72 bp | AACATGGCAGCCAGATGGGCCTCCCGGTTCTCCTTATaGGACTCCATCTTCTGGGCCAGCTTCTCTTTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: NMAARWASRFSL*DSIFWASFSFA Trigger: GGCAAAAGAGAAGCTGGCCCAGAAGATGGAGTCCAATAAGGAGAACCGGGAGGCCCATCTGGCTGCCATGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| CDS CCA 72 bp | GGAGGCATTAAACTCAGGCACCCCGTCAAAGGAAGGTaGCTTCAAGATGACTTCAAAGGACTGGCCCGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GGIKLRHPVKGR*LQDDFKGLARG Trigger: ACCTCGGGCCAGTCCTTTGAAGTCATCTTGAAGCCACCTTCCTTTGACGGGGTGCCTGAGTTTAATGCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| CDS CAA 72 bp | TTCAAGATGACTTCAAAGGACTGGCCCGAGGTGCACTaGTTCAGCTCGATGACTTCCATATCAGAGATGACG | + |
|
Preference number: 6 (lower is better) Translates to: FKMTSKDWPEVH*FSSMTSISEMT Trigger: CGTCATCTCTGATATGGAAGTCATCGAGCTGAACAAGTGCACCTCGGGCCAGTCCTTTGAAGTCATCTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| CDS CAA 72 bp | TGGGCCAGCTTCTCTTTTGCCATCTTGATGAAGTTATaGTTTTCTTCGATAGCTTTCTGGATCACCTCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: WASFSFAILMKL*FSSIAFWITSR Trigger: GCGAGAGGTGATCCAGAAAGCTATCGAAGAAAACAATAACTTCATCAAGATGGCAAAAGAGAAGCTGGCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| CDS CAA 72 bp | GACTCCATCTTCTGGGCCAGCTTCTCTTTTGCCATCTaGATGAAGTTATTGTTTTCTTCGATAGCTTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: DSIFWASFSFAI*MKLLFSSIAFW Trigger: CCAGAAAGCTATCGAAGAAAACAATAACTTCATCAAGATGGCAAAAGAGAAGCTGGCCCAGAAGATGGAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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| CDS CAA 90 bp | TCCTTATTGGACTCCATCTTCTGGGCCAGCTTCTCTTTTGCCATCTaGATGAAGTTATTGTTTTCTTCGATAGCTTTCTGGATCACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SLLDSIFWASFSFAI*MKLLFSSIAFWITS Trigger: AGAGGTGATCCAGAAAGCTATCGAAGAAAACAATAACTTCATCAAGATGGCAAAAGAGAAGCTGGCCCAGAAGATGGAGTCCAATAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074523.13 ENSMUST00000118426.8 ENSMUST00000120229.8 ENSMUST00000121955.8 |
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