Pregenerated sensors for STKLD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049897Ensembl transcript IDs: ENSMUST00000055406.9, ENSMUST00000153771.8
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCAGCCCAACAAGGACAGCAGCCAGAGCACCGCACAGCCAGCCTCTaGTATTTCCACGTCCTCCGGATGAGTAGCCAGCACCCAGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: AAQQGQQPEHRTASL*YFHVLRMSSQHPGD Trigger: GTCACCTGGGTGCTGGCTACTCATCCGGAGGACGTGGAAATAGCAGAGGCTGGCTGTGCGGTGCTCTGGCTGCTGTCCTTGTTGGGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS TCA 90 bp | CAGAGCACCGCACAGCCAGCCTCTGCTATTTCCACGTCCTCCGGATaGGTAGCCAGCACCCAGGTGACCATGCCAGAGAGCTGCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: QSTAQPASAISTSSG*VASTQVTMPESCSK Trigger: CTTGGAGCAGCTCTCTGGCATGGTCACCTGGGTGCTGGCTACTCATCCGGAGGACGTGGAAATAGCAGAGGCTGGCTGTGCGGTGCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS GCA 90 bp | GGCCACCAGTTCGGACACCTTTGCGAGGCTGGCCAAGCCACGGAATaGATTGTTCACCAGCAGTACTCTGCCAGGGCACAGCTGGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: GHQFGHLCEAGQATE*IVHQQYSARAQLDA Trigger: AGCATCCAGCTGTGCCCTGGCAGAGTACTGCTGGTGAACAATGCATTCCGTGGCTTGGCCAGCCTCGCAAAGGTGTCCGAACTGGTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS GCA 90 bp | CGAGGCTGGCCAAGCCACGGAATGCATTGTTCACCAGCAGTACTCTaGCAGGGCACAGCTGGATGCTTCTCAGGAGCAGCACTACCACCT | + |
|
Preference number: 5 (lower is better) Translates to: RGWPSHGMHCSPAVL*QGTAGCFSGAALPP Trigger: AGGTGGTAGTGCTGCTCCTGAGAAGCATCCAGCTGTGCCCTGGCAGAGTACTGCTGGTGAACAATGCATTCCGTGGCTTGGCCAGCCTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CCA 90 bp | CCATGGTTTTCAGGATGGGCTTCAGGCTGCCTGGATGATGGCGGATaGCCTTCCGCAGTTGCATGGCTTCTGTGTCGTTCAGGAAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PWFSGWASGCLDDGG*PSAVAWLLCRSGRS Trigger: GCTCCTTCCTGAACGACACAGAAGCCATGCAACTGCGGAAGGCCATCCGCCATCATCCAGGCAGCCTGAAGCCCATCCTGAAAACCATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS GCA 90 bp | GAGAGCTTCAGGAGCCATCCAGGACTTCTGGCAGGGGTCTTCTTCTaGTCGGACATTCCACTTAGCTTCGTGGGTCATCAGTGCCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ESFRSHPGLLAGVFF*SDIPLSFVGHQCLG Trigger: TCCCAGGCACTGATGACCCACGAAGCTAAGTGGAATGTCCGAGCAGAAGAAGACCCCTGCCAGAAGTCCTGGATGGCTCCTGAAGCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS GCA 90 bp | TTCTCAGGAGCAGCACTACCACCTGCTCAAACTGACTCTCCTTTATaGAGCCCAACAAGGACAGCAGCCAGAGCACCGCACAGCCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: FSGAALPPAQTDSPL*SPTRTAARAPHSQP Trigger: AGGCTGGCTGTGCGGTGCTCTGGCTGCTGTCCTTGTTGGGCTGCATAAAGGAGAGTCAGTTTGAGCAGGTGGTAGTGCTGCTCCTGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CCA 90 bp | GCTTCAGGCTGCCTGGATGATGGCGGATGGCCTTCCGCAGTTGCATaGCTTCTGTGTCGTTCAGGAAGGAGCAAGTGGCCATGTCTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ASGCLDDGGWPSAVA*LLCRSGRSKWPCLE Trigger: TTCTAGACATGGCCACTTGCTCCTTCCTGAACGACACAGAAGCCATGCAACTGCGGAAGGCCATCCGCCATCATCCAGGCAGCCTGAAGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS TCA 90 bp | CACAGCTGGATGCTTCTCAGGAGCAGCACTACCACCTGCTCAAACTaGCTCTCCTTTATGCAGCCCAACAAGGACAGCAGCCAGAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: HSWMLLRSSTTTCSN*LSFMQPNKDSSQST Trigger: GGTGCTCTGGCTGCTGTCCTTGTTGGGCTGCATAAAGGAGAGTCAGTTTGAGCAGGTGGTAGTGCTGCTCCTGAGAAGCATCCAGCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CCA 90 bp | GTACTACTATTCGGAAGGCCACCAGTTCGGACACCTTTGCGAGGCTaGCCAAGCCACGGAATGCATTGTTCACCAGCAGTACTCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLLFGRPPVRTPLRG*PSHGMHCSPAVLCQ Trigger: CTGGCAGAGTACTGCTGGTGAACAATGCATTCCGTGGCTTGGCCAGCCTCGCAAAGGTGTCCGAACTGGTGGCCTTCCGAATAGTAGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS GCA 90 bp | AGAAGGGAGCAGGTGCTGAGCAGAATATCCAGGATCCGCCCATGCTaGTTTATGATGCTGATCACCTCTTCCAGCAGCTCTGTGGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RREQVLSRISRIRPC*FMMLITSSSSSVGH Trigger: ATGGCCCACAGAGCTGCTGGAAGAGGTGATCAGCATCATAAAGCAGCATGGGCGGATCCTGGATATTCTGCTCAGCACCTGCTCCCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS GCA 90 bp | GGAATGCATTGTTCACCAGCAGTACTCTGCCAGGGCACAGCTGGATaGTTCTCAGGAGCAGCACTACCACCTGCTCAAACTGACTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GMHCSPAVLCQGTAG*FSGAALPPAQTDSP Trigger: AGGAGAGTCAGTTTGAGCAGGTGGTAGTGCTGCTCCTGAGAAGCATCCAGCTGTGCCCTGGCAGAGTACTGCTGGTGAACAATGCATTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS GCA 90 bp | CTCTTCCAGTACTACTATTCGGAAGGCCACCAGTTCGGACACCTTTaGGAGGCTGGCCAAGCCACGGAATGCATTGTTCACCAGCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LFQYYYSEGHQFGHL*EAGQATECIVHQQY Trigger: GTACTGCTGGTGAACAATGCATTCCGTGGCTTGGCCAGCCTCGCAAAGGTGTCCGAACTGGTGGCCTTCCGAATAGTAGTACTGGAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS GCA 90 bp | TCTCTGGCAGGATCTCCTTGTAGGAGGTCAGATGGGCCAACAGCATaGAGAGGTTCTCCACCACCTCAGGGTCATCCTTGTAGAGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SLAGSPCRRSDGPTA*RGSPPPQGHPCRAC Trigger: ACAAGCTCTACAAGGATGACCCTGAGGTGGTGGAGAACCTCTGCATGCTGTTGGCCCATCTGACCTCCTACAAGGAGATCCTGCCAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS GCA 90 bp | GTCTTCTTCTGCTCGGACATTCCACTTAGCTTCGTGGGTCATCAGTaGCTGGGAGCTCATATCCTGCAGTTTACAGTAGCCACTGTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: VFFCSDIPLSFVGHQ*LGAHILQFTVATVN Trigger: GTTAACAGTGGCTACTGTAAACTGCAGGATATGAGCTCCCAGGCACTGATGACCCACGAAGCTAAGTGGAATGTCCGAGCAGAAGAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS GCA 90 bp | TTGTTAATGGCTCTGAGCTGGACCTCTGGTCGACTGGAGAAATTCTaGATGACATCTAAGATGTTGGCCATGTTGCCTTCAAGCAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: LLMALSWTSGRLEKF*MTSKMLAMLPSSST Trigger: CGTGCTGCTTGAAGGCAACATGGCCAACATCTTAGATGTCATGCAGAATTTCTCCAGTCGACCAGAGGTCCAGCTCAGAGCCATTAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CCA 90 bp | AGGAACAGAGAGGAGATCTCATTGTTCCACATGATGAACATCTCATaGTACAGAGAGAGATTGGGGTGTTGGAGCTTCAGCAGGGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: RNREEISLFHMMNIS*YRERLGCWSFSRGI Trigger: GATGCCCCTGCTGAAGCTCCAACACCCCAATCTCTCTCTGTACCATGAGATGTTCATCATGTGGAACAATGAGATCTCCTCTCTGTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055406.9 ENSMUST00000153771.8 |
||
| CDS GCA 90 bp | TTTGAAGGAGTTGCTCATGAAGGTGACTTGCATCACATCCTTGATTaGCAGTCGATCGGAGGGGTTGATATGCAACATGAAGGGCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FEGVAHEGDLHHILD*QSIGGVDMQHEGQK Trigger: CTTCTGCCCTTCATGTTGCATATCAACCCCTCCGATCGACTGGCAATCAAGGATGTGATGCAAGTCACCTTCATGAGCAACTCCTTCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CCA 90 bp | AGCTGGTCCTCTGGCATTGTCAACAACTTGTTAATGGCTCTGAGCTaGACCTCTGGTCGACTGGAGAAATTCTGCATGACATCTAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SWSSGIVNNLLMALS*TSGRLEKFCMTSKM Trigger: CATCTTAGATGTCATGCAGAATTTCTCCAGTCGACCAGAGGTCCAGCTCAGAGCCATTAACAAGTTGTTGACAATGCCAGAGGACCAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CCA 90 bp | TCAACTTATGTAGGTACTCGATGGCATCCAATACCTGGCTTAGCATaGTATGCATCCACTCAGTGTCAACAACTGCTTTTAACTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: STYVGTRWHPIPGLA*YASTQCQQLLLTSS Trigger: AGAGGAAGTTAAAAGCAGTTGTTGACACTGAGTGGATGCATACCATGCTAAGCCAGGTATTGGATGCCATCGAGTACCTACATAAGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS GCA 90 bp | TTATGTAGGTACTCGATGGCATCCAATACCTGGCTTAGCATGGTATaGATCCACTCAGTGTCAACAACTGCTTTTAACTTCCTCTTATTC | + |
|
Preference number: 5 (lower is better) Translates to: LCRYSMASNTWLSMV*IHSVSTTAFNFLLF Trigger: GAATAAGAGGAAGTTAAAAGCAGTTGTTGACACTGAGTGGATGCATACCATGCTAAGCCAGGTATTGGATGCCATCGAGTACCTACATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS TCA 90 bp | TCCACTCAGTGTCAACAACTGCTTTTAACTTCCTCTTATTCTCCATaGTATTCTGGAATGTTCCTTGGGAGTAATAATCCATCACCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: STQCQQLLLTSSYSP*YSGMFLGSNNPSPG Trigger: GCCTGGTGATGGATTATTACTCCCAAGGAACATTCCAGAATATCATGGAGAATAAGAGGAAGTTAAAAGCAGTTGTTGACACTGAGTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055406.9 ENSMUST00000153771.8 |
||
| CDS CAA 90 bp | GCCAGCACCCAGGTGACCATGCCAGAGAGCTGCTCCAAGGGCTCTTaGTCCACAGTGACAACATCTACCAGGAGGGACCAGAGCAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ASTQVTMPESCSKGS*STVTTSTRRDQSRL Trigger: GAGCCTGCTCTGGTCCCTCCTGGTAGATGTTGTCACTGTGGACAAAGAGCCCTTGGAGCAGCTCTCTGGCATGGTCACCTGGGTGCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CAA 72 bp | GACACCTTTGCGAGGCTGGCCAAGCCACGGAATGCATaGTTCACCAGCAGTACTCTGCCAGGGCACAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: DTFARLAKPRNA*FTSSTLPGHSW Trigger: CCAGCTGTGCCCTGGCAGAGTACTGCTGGTGAACAATGCATTCCGTGGCTTGGCCAGCCTCGCAAAGGTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CAA 90 bp | ACCAGTTCGGACACCTTTGCGAGGCTGGCCAAGCCACGGAATGCATaGTTCACCAGCAGTACTCTGCCAGGGCACAGCTGGATGCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: TSSDTFARLAKPRNA*FTSSTLPGHSWMLL Trigger: GAGAAGCATCCAGCTGTGCCCTGGCAGAGTACTGCTGGTGAACAATGCATTCCGTGGCTTGGCCAGCCTCGCAAAGGTGTCCGAACTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS GCA 72 bp | TTCGGACACCTTTGCGAGGCTGGCCAAGCCACGGAATaGATTGTTCACCAGCAGTACTCTGCCAGGGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: FGHLCEAGQATE*IVHQQYSARAQ Trigger: CTGTGCCCTGGCAGAGTACTGCTGGTGAACAATGCATTCCGTGGCTTGGCCAGCCTCGCAAAGGTGTCCGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CCA 72 bp | TCAGGATGGGCTTCAGGCTGCCTGGATGATGGCGGATaGCCTTCCGCAGTTGCATGGCTTCTGTGTCGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SGWASGCLDDGG*PSAVAWLLCRS Trigger: TGAACGACACAGAAGCCATGCAACTGCGGAAGGCCATCCGCCATCATCCAGGCAGCCTGAAGCCCATCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CCA 72 bp | AGCTCCAGGCTGGAGGTAAAGCGCCCCCGGATCACCTaGACTAGGTCTTTGATGCCTCCAGACTCCATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSRLEVKRPRIT*TRSLMPPDSIS Trigger: AGAGATGGAGTCTGGAGGCATCAAAGACCTAGTCCAGGTGATCCGGGGGCGCTTTACCTCCAGCCTGGAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CAA 90 bp | GGACCAGAGCAGGCTCAGGATAGAGAGGCAGATGTCCCTGTCCTCTaGGAAGTGCTCCAGGTTCTCTTGGGCAAGCTGAAACAACCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GPEQAQDREADVPVL*EVLQVLLGKLKQPL Trigger: GAGGGGTTGTTTCAGCTTGCCCAAGAGAACCTGGAGCACTTCCAAGAGGACAGGGACATCTGCCTCTCTATCCTGAGCCTGCTCTGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS TCA 72 bp | TGCCAGAGAGCTGCTCCAAGGGCTCTTTGTCCACAGTaGCAACATCTACCAGGAGGGACCAGAGCAGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: CQRAAPRALCPQ*QHLPGGTRAGS Trigger: TGAGCCTGCTCTGGTCCCTCCTGGTAGATGTTGTCACTGTGGACAAAGAGCCCTTGGAGCAGCTCTCTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CCA 72 bp | TTCGGAAGGCCACCAGTTCGGACACCTTTGCGAGGCTaGCCAAGCCACGGAATGCATTGTTCACCAGCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: FGRPPVRTPLRG*PSHGMHCSPAV Trigger: TACTGCTGGTGAACAATGCATTCCGTGGCTTGGCCAGCCTCGCAAAGGTGTCCGAACTGGTGGCCTTCCGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CAA 72 bp | CAGGTGACCATGCCAGAGAGCTGCTCCAAGGGCTCTTaGTCCACAGTGACAACATCTACCAGGAGGGACCAG | + |
|
Preference number: 6 (lower is better) Translates to: QVTMPESCSKGS*STVTTSTRRDQ Trigger: CTGGTCCCTCCTGGTAGATGTTGTCACTGTGGACAAAGAGCCCTTGGAGCAGCTCTCTGGCATGGTCACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS GCA 72 bp | TGTTCACCAGCAGTACTCTGCCAGGGCACAGCTGGATaGTTCTCAGGAGCAGCACTACCACCTGCTCAAACT | + |
|
Preference number: 6 (lower is better) Translates to: CSPAVLCQGTAG*FSGAALPPAQT Trigger: AGTTTGAGCAGGTGGTAGTGCTGCTCCTGAGAAGCATCCAGCTGTGCCCTGGCAGAGTACTGCTGGTGAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CCA 72 bp | ATGAACATCTCATGGTACAGAGAGAGATTGGGGTGTTaGAGCTTCAGCAGGGGCATCAGCTCCTCCAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: MNISWYRERLGC*SFSRGISSSRA Trigger: GGCCCTGGAGGAGCTGATGCCCCTGCTGAAGCTCCAACACCCCAATCTCTCTCTGTACCATGAGATGTTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055406.9 ENSMUST00000153771.8 |
||
| CDS CAA 72 bp | GATGAACATCTCATGGTACAGAGAGAGATTGGGGTGTaGGAGCTTCAGCAGGGGCATCAGCTCCTCCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: DEHLMVQREIGV*ELQQGHQLLQG Trigger: GCCCTGGAGGAGCTGATGCCCCTGCTGAAGCTCCAACACCCCAATCTCTCTCTGTACCATGAGATGTTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055406.9 ENSMUST00000153771.8 |
||
| CDS CAA 72 bp | GGCAGCCCTAGCTGGTCCTCTGGCATTGTCAACAACTaGTTAATGGCTCTGAGCTGGACCTCTGGTCGACTG | + |
|
Preference number: 6 (lower is better) Translates to: GSPSWSSGIVNN*LMALSWTSGRL Trigger: CAGTCGACCAGAGGTCCAGCTCAGAGCCATTAACAAGTTGTTGACAATGCCAGAGGACCAGCTAGGGCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CAA 72 bp | TCAAACTGCTCCTTGGGATCTCAGCTTCTGGGTCCTTaGCCAGTGCTTGGCCAAGAACACGCAGCAGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SNCSLGSQLLGP*PVLGQEHAAEG Trigger: CCCTTCTGCTGCGTGTTCTTGGCCAAGCACTGGCAAAGGACCCAGAAGCTGAGATCCCAAGGAGCAGTTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CAA 72 bp | GATGTCCCTGTCCTCTTGGAAGTGCTCCAGGTTCTCTaGGGCAAGCTGAAACAACCCCTCCTCTTCCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: DVPVLLEVLQVL*GKLKQPLLFQL Trigger: GAGCTGGAAGAGGAGGGGTTGTTTCAGCTTGCCCAAGAGAACCTGGAGCACTTCCAAGAGGACAGGGACATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CAA 72 bp | CACCTCAGGGTCATCCTTGTAGAGCTTGTAGATATCTaGGATGAGGTGGAGGCCGCTGCTGCCCTCTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: HLRVILVELVDI*DEVEAAAALFQ Trigger: CTGGAAGAGGGCAGCAGCGGCCTCCACCTCATCCAAGATATCTACAAGCTCTACAAGGATGACCCTGAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CAA 90 bp | GTGGGCCATGGCAGCCCTAGCTGGTCCTCTGGCATTGTCAACAACTaGTTAATGGCTCTGAGCTGGACCTCTGGTCGACTGGAGAAATTC | + |
|
Preference number: 6 (lower is better) Translates to: VGHGSPSWSSGIVNN*LMALSWTSGRLEKF Trigger: GAATTTCTCCAGTCGACCAGAGGTCCAGCTCAGAGCCATTAACAAGTTGTTGACAATGCCAGAGGACCAGCTAGGGCTGCCATGGCCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CAA 90 bp | CCTCTTCCAGTACTACTATTCGGAAGGCCACCAGTTCGGACACCTTaGCGAGGCTGGCCAAGCCACGGAATGCATTGTTCACCAGCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: PLPVLLFGRPPVRTP*RGWPSHGMHCSPAV Trigger: TACTGCTGGTGAACAATGCATTCCGTGGCTTGGCCAGCCTCGCAAAGGTGTCCGAACTGGTGGCCTTCCGAATAGTAGTACTGGAAGAGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CAA 90 bp | TTCCTGCCCTGCAGGAGGCTCAAGCTGATCCTCCTGGAGGCCAGGTaGTGCATTTGCTTCCAGTACCTGGAGTATCTCATCAGCGTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: FLPCRRLKLILLEAR*CICFQYLEYLISVR Trigger: TCTTACGCTGATGAGATACTCCAGGTACTGGAAGCAAATGCACAACCTGGCCTCCAGGAGGATCAGCTTGAGCCTCCTGCAGGGCAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS GCA 72 bp | TACTACTATTCGGAAGGCCACCAGTTCGGACACCTTTaGGAGGCTGGCCAAGCCACGGAATGCATTGTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: YYYSEGHQFGHL*EAGQATECIVH Trigger: GTGAACAATGCATTCCGTGGCTTGGCCAGCCTCGCAAAGGTGTCCGAACTGGTGGCCTTCCGAATAGTAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CCA 72 bp | GGAGATGATCAAACTGCTCCTTGGGATCTCAGCTTCTaGGTCCTTTGCCAGTGCTTGGCCAAGAACACGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GDDQTAPWDLSF*VLCQCLAKNTQ Trigger: CTGCGTGTTCTTGGCCAAGCACTGGCAAAGGACCCAGAAGCTGAGATCCCAAGGAGCAGTTTGATCATCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CAA 72 bp | CAGGCTCAGGATAGAGAGGCAGATGTCCCTGTCCTCTaGGAAGTGCTCCAGGTTCTCTTGGGCAAGCTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: QAQDREADVPVL*EVLQVLLGKLK Trigger: TTTCAGCTTGCCCAAGAGAACCTGGAGCACTTCCAAGAGGACAGGGACATCTGCCTCTCTATCCTGAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CAA 72 bp | TGCAGGAGGCTCAAGCTGATCCTCCTGGAGGCCAGGTaGTGCATTTGCTTCCAGTACCTGGAGTATCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: CRRLKLILLEAR*CICFQYLEYLI Trigger: GATGAGATACTCCAGGTACTGGAAGCAAATGCACAACCTGGCCTCCAGGAGGATCAGCTTGAGCCTCCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS TCA 72 bp | GAGACCAGATGTCGGATTTGGTGGAGAAGGAGAATTTaGGAGCTTCAGGAGCCATCCAGGACTTCTGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ETRCRIWWRRRI*ELQEPSRTSGR Trigger: CCTGCCAGAAGTCCTGGATGGCTCCTGAAGCTCTCAAATTCTCCTTCTCCACCAAATCCGACATCTGGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS TCA 72 bp | CAGGGTCATCCTTGTAGAGCTTGTAGATATCTTGGATaGGGTGGAGGCCGCTGCTGCCCTCTTCCAGTACTA | + |
|
Preference number: 6 (lower is better) Translates to: QGHPCRACRYLG*GGGRCCPLPVL Trigger: TAGTACTGGAAGAGGGCAGCAGCGGCCTCCACCTCATCCAAGATATCTACAAGCTCTACAAGGATGACCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS GCA 72 bp | TGCTCGGACATTCCACTTAGCTTCGTGGGTCATCAGTaGCTGGGAGCTCATATCCTGCAGTTTACAGTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: CSDIPLSFVGHQ*LGAHILQFTVA Trigger: GGCTACTGTAAACTGCAGGATATGAGCTCCCAGGCACTGATGACCCACGAAGCTAAGTGGAATGTCCGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS GCA 72 bp | CAGGTGCTGAGCAGAATATCCAGGATCCGCCCATGCTaGTTTATGATGCTGATCACCTCTTCCAGCAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: QVLSRISRIRPC*FMMLITSSSSS Trigger: AGAGCTGCTGGAAGAGGTGATCAGCATCATAAAGCAGCATGGGCGGATCCTGGATATTCTGCTCAGCACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CAA 72 bp | GCTCAAGCTGATCCTCCTGGAGGCCAGGTTGTGCATTaGCTTCCAGTACCTGGAGTATCTCATCAGCGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: AQADPPGGQVVH*LPVPGVSHQRK Trigger: CTTACGCTGATGAGATACTCCAGGTACTGGAAGCAAATGCACAACCTGGCCTCCAGGAGGATCAGCTTGAGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CAA 90 bp | GTTCTCCACCACCTCAGGGTCATCCTTGTAGAGCTTGTAGATATCTaGGATGAGGTGGAGGCCGCTGCTGCCCTCTTCCAGTACTACTAT | + |
|
Preference number: 6 (lower is better) Translates to: VLHHLRVILVELVDI*DEVEAAAALFQYYY Trigger: ATAGTAGTACTGGAAGAGGGCAGCAGCGGCCTCCACCTCATCCAAGATATCTACAAGCTCTACAAGGATGACCCTGAGGTGGTGGAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS GCA 72 bp | GAGGAGCTTTTGAAGGAGTTGCTCATGAAGGTGACTTaGATCACATCCTTGATTGCCAGTCGATCGGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: EELLKELLMKVT*ITSLIASRSEG Trigger: CCCCTCCGATCGACTGGCAATCAAGGATGTGATGCAAGTCACCTTCATGAGCAACTCCTTCAAAAGCTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS GCA 72 bp | CTCAAGCTGATCCTCCTGGAGGCCAGGTTGTGCATTTaGTTCCAGTACCTGGAGTATCTCATCAGCGTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LKLILLEARLCI*FQYLEYLISVR Trigger: TCTTACGCTGATGAGATACTCCAGGTACTGGAAGCAAATGCACAACCTGGCCTCCAGGAGGATCAGCTTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CCA 72 bp | GGTATCCATCAGGAAGGAGATGATCAAACTGCTCCTTaGGATCTCAGCTTCTGGGTCCTTTGCCAGTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GIHQEGDDQTAP*DLSFWVLCQCL Trigger: CAAGCACTGGCAAAGGACCCAGAAGCTGAGATCCCAAGGAGCAGTTTGATCATCTCCTTCCTGATGGATACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CAA 72 bp | TTCCACATGATGAACATCTCATGGTACAGAGAGAGATaGGGGTGTTGGAGCTTCAGCAGGGGCATCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FHMMNISWYRER*GCWSFSRGISS Trigger: GGAGCTGATGCCCCTGCTGAAGCTCCAACACCCCAATCTCTCTCTGTACCATGAGATGTTCATCATGTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055406.9 ENSMUST00000153771.8 |
||
| CDS GCA 72 bp | GCTCTGAGCTGGACCTCTGGTCGACTGGAGAAATTCTaGATGACATCTAAGATGTTGGCCATGTTGCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: ALSWTSGRLEKF*MTSKMLAMLPS Trigger: TGAAGGCAACATGGCCAACATCTTAGATGTCATGCAGAATTTCTCCAGTCGACCAGAGGTCCAGCTCAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CAA 72 bp | AGAGGAGCTTTTGAAGGAGTTGCTCATGAAGGTGACTaGCATCACATCCTTGATTGCCAGTCGATCGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RGAFEGVAHEGD*HHILDCQSIGG Trigger: CCCTCCGATCGACTGGCAATCAAGGATGTGATGCAAGTCACCTTCATGAGCAACTCCTTCAAAAGCTCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CAA 90 bp | TTCTGCCGCTGCATATTCAGCGCAACAGAGGAGCTTTTGAAGGAGTaGCTCATGAAGGTGACTTGCATCACATCCTTGATTGCCAGTCGA | + |
|
Preference number: 6 (lower is better) Translates to: FCRCIFSATEELLKE*LMKVTCITSLIASR Trigger: TCGACTGGCAATCAAGGATGTGATGCAAGTCACCTTCATGAGCAACTCCTTCAAAAGCTCCTCTGTTGCGCTGAATATGCAGCGGCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CAA 72 bp | GGTCGACTGGAGAAATTCTGCATGACATCTAAGATGTaGGCCATGTTGCCTTCAAGCAGCACGTCAGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: GRLEKFCMTSKM*AMLPSSSTSVM Trigger: CATCACTGACGTGCTGCTTGAAGGCAACATGGCCAACATCTTAGATGTCATGCAGAATTTCTCCAGTCGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CCA 72 bp | GAGGAGATCTCATTGTTCCACATGATGAACATCTCATaGTACAGAGAGAGATTGGGGTGTTGGAGCTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: EEISLFHMMNIS*YRERLGCWSFS Trigger: GCTGAAGCTCCAACACCCCAATCTCTCTCTGTACCATGAGATGTTCATCATGTGGAACAATGAGATCTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055406.9 ENSMUST00000153771.8 |
||
| CDS CCA 72 bp | TCTGGCATTGTCAACAACTTGTTAATGGCTCTGAGCTaGACCTCTGGTCGACTGGAGAAATTCTGCATGACA | + |
|
Preference number: 6 (lower is better) Translates to: SGIVNNLLMALS*TSGRLEKFCMT Trigger: TGTCATGCAGAATTTCTCCAGTCGACCAGAGGTCCAGCTCAGAGCCATTAACAAGTTGTTGACAATGCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CAA 72 bp | TCCATCACCAGGCAGAGGAACAGAGAGGAGATCTCATaGTTCCACATGATGAACATCTCATGGTACAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SITRQRNREEIS*FHMMNISWYRE Trigger: CTCTCTGTACCATGAGATGTTCATCATGTGGAACAATGAGATCTCCTCTCTGTTCCTCTGCCTGGTGATGGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055406.9 ENSMUST00000153771.8 |
||
| CDS CAA 72 bp | GAGAAATTCTGCATGACATCTAAGATGTTGGCCATGTaGCCTTCAAGCAGCACGTCAGTGATGAAGATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: EKFCMTSKMLAM*PSSSTSVMKMG Trigger: CCCCATCTTCATCACTGACGTGCTGCTTGAAGGCAACATGGCCAACATCTTAGATGTCATGCAGAATTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CCA 72 bp | GTAGGTACTCGATGGCATCCAATACCTGGCTTAGCATaGTATGCATCCACTCAGTGTCAACAACTGCTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: VGTRWHPIPGLA*YASTQCQQLLL Trigger: TAAAAGCAGTTGTTGACACTGAGTGGATGCATACCATGCTAAGCCAGGTATTGGATGCCATCGAGTACCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS TCA 72 bp | TTAACAAGGACGATGTTGGAAGGCTTGAGGTTCCTGTaGACGATGTTCAACTTATGTAGGTACTCGATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LTRTMLEGLRFL*TMFNLCRYSMA Trigger: TGCCATCGAGTACCTACATAAGTTGAACATCGTTCACAGGAACCTCAAGCCTTCCAACATCGTCCTTGTTAA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS GCA 72 bp | TACTCGATGGCATCCAATACCTGGCTTAGCATGGTATaGATCCACTCAGTGTCAACAACTGCTTTTAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: YSMASNTWLSMV*IHSVSTTAFNF Trigger: GAAGTTAAAAGCAGTTGTTGACACTGAGTGGATGCATACCATGCTAAGCCAGGTATTGGATGCCATCGAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CAA 72 bp | TGCATATTCAGCGCAACAGAGGAGCTTTTGAAGGAGTaGCTCATGAAGGTGACTTGCATCACATCCTTGATT | + |
|
Preference number: 6 (lower is better) Translates to: CIFSATEELLKE*LMKVTCITSLI Trigger: AATCAAGGATGTGATGCAAGTCACCTTCATGAGCAACTCCTTCAAAAGCTCCTCTGTTGCGCTGAATATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055406.9 |
||
| CDS CAA 72 bp | CTTCCTCTTATTCTCCATGATATTCTGGAATGTTCCTaGGGAGTAATAATCCATCACCAGGCAGAGGAACAG | + |
|
Preference number: 6 (lower is better) Translates to: LPLILHDILECS*GVIIHHQAEEQ Trigger: CTGTTCCTCTGCCTGGTGATGGATTATTACTCCCAAGGAACATTCCAGAATATCATGGAGAATAAGAGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055406.9 ENSMUST00000153771.8 |
||
| CDS TCA 72 bp | TGTCAACAACTGCTTTTAACTTCCTCTTATTCTCCATaGTATTCTGGAATGTTCCTTGGGAGTAATAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: CQQLLLTSSYSP*YSGMFLGSNNP Trigger: TGGATTATTACTCCCAAGGAACATTCCAGAATATCATGGAGAATAAGAGGAAGTTAAAAGCAGTTGTTGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055406.9 ENSMUST00000153771.8 |
||