Pregenerated sensors for STK4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018209Ensembl transcript IDs: ENSMUST00000018353.14, ENSMUST00000088291.5, ENSMUST00000137866.2
Found 239 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCCATGCAACCCTGCAATGGGTGAAGCTGACGTCTGGGATTCAGTaGCCACCTACGAGCCTCCCAGTGTCTTCTGCCCGCTTGCTGCAC | + |
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Preference number: 1 (lower is better) Translates to: LHATLQWVKLTSGIQ*PPTSLPVSSARLLH Trigger: GTGCAGCAAGCGGGCAGAAGACACTGGGAGGCTCGTAGGTGGTCACTGAATCCCAGACGTCAGCTTCACCCATTGCAGGGTTGCATGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR CCA 90 bp | CGACAGCTTCCGAGGCCAGTGGGGACCATGGGAGGCTCGTCACTGTaGTGGCACAACCATCCCAAGACTAATTTCTCCATGCAACCCTGC | + |
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Preference number: 1 (lower is better) Translates to: RQLPRPVGTMGGSSL*WHNHPKTNFSMQPC Trigger: GCAGGGTTGCATGGAGAAATTAGTCTTGGGATGGTTGTGCCACCACAGTGACGAGCCTCCCATGGTCCCCACTGGCCTCGGAAGCTGTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR GCA 90 bp | GTGAGACGGGGTTCCTTGGATTCGGTCCTCAAGGAAAGGACAGTTTaGTCCCTTCTGCCACCGAACAGCACATACGCCTCGCCAGGAATC | + |
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Preference number: 1 (lower is better) Translates to: VRRGSLDSVLKERTV*SLLPPNSTYASPGI Trigger: GATTCCTGGCGAGGCGTATGTGCTGTTCGGTGGCAGAAGGGAGCAAACTGTCCTTTCCTTGAGGACCGAATCCAAGGAACCCCGTCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR CCA 90 bp | CAGCTTCCGAGGCCAGTGGGGACCATGGGAGGCTCGTCACTGTGGTaGCACAACCATCCCAAGACTAATTTCTCCATGCAACCCTGCAAT | + |
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Preference number: 1 (lower is better) Translates to: QLPRPVGTMGGSSLW*HNHPKTNFSMQPCN Trigger: ATTGCAGGGTTGCATGGAGAAATTAGTCTTGGGATGGTTGTGCCACCACAGTGACGAGCCTCCCATGGTCCCCACTGGCCTCGGAAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR CCA 90 bp | GGGCAGTATCTTGGATGCGACTTTAGGCAGCTGGGAGGGTGGCGATaGATGAAAGGCGTTGAGACAGCAAAGGCTACTCTGCAAAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: GQYLGCDFRQLGGWR*MKGVETAKATLQRG Trigger: CCCTCTTTGCAGAGTAGCCTTTGCTGTCTCAACGCCTTTCATCCATCGCCACCCTCCCAGCTGCCTAAAGTCGCATCCAAGATACTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR CCA 90 bp | GGCACTGGGCAGTATCTTGGATGCGACTTTAGGCAGCTGGGAGGGTaGCGATGGATGAAAGGCGTTGAGACAGCAAAGGCTACTCTGCAA | + |
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Preference number: 1 (lower is better) Translates to: GTGQYLGCDFRQLGG*RWMKGVETAKATLQ Trigger: TTGCAGAGTAGCCTTTGCTGTCTCAACGCCTTTCATCCATCGCCACCCTCCCAGCTGCCTAAAGTCGCATCCAAGATACTGCCCAGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR GCA 90 bp | CCAAGCAGCCCTTCCCACTGGCGCACATTCCTGAGTTCACAAAGGTaGTGTGGAGAGATGACAGAGCAGAAGTGCTGGCTAACAGACATG | + |
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Preference number: 1 (lower is better) Translates to: PSSPSHWRTFLSSQR*CGEMTEQKCWLTDM Trigger: CATGTCTGTTAGCCAGCACTTCTGCTCTGTCATCTCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTGCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR GCA 90 bp | GACGTCTGGGATTCAGTGACCACCTACGAGCCTCCCAGTGTCTTCTaGCCGCTTGCTGCACAGTACCATAATCTCACAGGAAAGAGGCAA | + |
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Preference number: 1 (lower is better) Translates to: DVWDSVTTYEPPSVF*PLAAQYHNLTGKRQ Trigger: TTGCCTCTTTCCTGTGAGATTATGGTACTGTGCAGCAAGCGGGCAGAAGACACTGGGAGGCTCGTAGGTGGTCACTGAATCCCAGACGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR CCA 90 bp | AGACTAATTTCTCCATGCAACCCTGCAATGGGTGAAGCTGACGTCTaGGATTCAGTGACCACCTACGAGCCTCCCAGTGTCTTCTGCCCG | + |
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Preference number: 1 (lower is better) Translates to: RLISPCNPAMGEADV*DSVTTYEPPSVFCP Trigger: CGGGCAGAAGACACTGGGAGGCTCGTAGGTGGTCACTGAATCCCAGACGTCAGCTTCACCCATTGCAGGGTTGCATGGAGAAATTAGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR TCA 90 bp | AGTATCTTGGATGCGACTTTAGGCAGCTGGGAGGGTGGCGATGGATaGAAGGCGTTGAGACAGCAAAGGCTACTCTGCAAAGAGGGTGCA | + |
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Preference number: 1 (lower is better) Translates to: SILDATLGSWEGGDG*KALRQQRLLCKEGA Trigger: TGCACCCTCTTTGCAGAGTAGCCTTTGCTGTCTCAACGCCTTTCATCCATCGCCACCCTCCCAGCTGCCTAAAGTCGCATCCAAGATACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR TCA 90 bp | CAAGATACACCTTGCCAGTGTAAATGCACACACCAAATGGCACTGTaGCTGCCAAGCAGCCCTTCCCACTGGCGCACATTCCTGAGTTCA | + |
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Preference number: 1 (lower is better) Translates to: QDTPCQCKCTHQMAL*LPSSPSHWRTFLSS Trigger: TGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTGCTTGGCAGTCACAGTGCCATTTGGTGTGTGCATTTACACTGGCAAGGTGTATCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR CCA 90 bp | CTGAGTTCACAAAGGTGCTGTGGAGAGATGACAGAGCAGAAGTGCTaGCTAACAGACATGAGTCTAGCAACCCAGAAGCCACCAAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: LSSQRCCGEMTEQKC*LTDMSLATQKPPRL Trigger: CAGCCTTGGTGGCTTCTGGGTTGCTAGACTCATGTCTGTTAGCCAGCACTTCTGCTCTGTCATCTCTCCACAGCACCTTTGTGAACTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR CCA 90 bp | AAACCCTTCAAGATACACCTTGCCAGTGTAAATGCACACACCAAATaGCACTGTGACTGCCAAGCAGCCCTTCCCACTGGCGCACATTCC | + |
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Preference number: 1 (lower is better) Translates to: KPFKIHLASVNAHTK*HCDCQAALPTGAHS Trigger: GGAATGTGCGCCAGTGGGAAGGGCTGCTTGGCAGTCACAGTGCCATTTGGTGTGTGCATTTACACTGGCAAGGTGTATCTTGAAGGGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR GCA 90 bp | TTCCTGAGTTCACAAAGGTGCTGTGGAGAGATGACAGAGCAGAAGTaGTGGCTAACAGACATGAGTCTAGCAACCCAGAAGCCACCAAGG | + |
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Preference number: 1 (lower is better) Translates to: FLSSQRCCGEMTEQK*WLTDMSLATQKPPR Trigger: CCTTGGTGGCTTCTGGGTTGCTAGACTCATGTCTGTTAGCCAGCACTTCTGCTCTGTCATCTCTCCACAGCACCTTTGTGAACTCAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR GCA 90 bp | TGGATGAAAGGCGTTGAGACAGCAAAGGCTACTCTGCAAAGAGGGTaGAGGCGTCTCCTGGGAAAAGAGCAAACTCTCAAGTTCTCCACA | + |
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Preference number: 1 (lower is better) Translates to: WMKGVETAKATLQRG*RRLLGKEQTLKFST Trigger: TGTGGAGAACTTGAGAGTTTGCTCTTTTCCCAGGAGACGCCTGCACCCTCTTTGCAGAGTAGCCTTTGCTGTCTCAACGCCTTTCATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR GCA 90 bp | GGACTTTGCTGTCCCTGTGACTACCAGCCCCACAGGATGATGTCATaGATCCCAATCCACAGTGTCATGGGAAGGAACCTTTCAAACGAA | + |
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Preference number: 1 (lower is better) Translates to: GLCCPCDYQPHRMMS*IPIHSVMGRNLSNE Trigger: TTCGTTTGAAAGGTTCCTTCCCATGACACTGTGGATTGGGATGCATGACATCATCCTGTGGGGCTGGTAGTCACAGGGACAGCAAAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR CCA 90 bp | ATAGCAGCTCAGGTACCAAAGAGGCAAGGAAAGAGCAGGGGTTCCTaGGCCAACCTGATGTACAGTGGTAGCTTCATTCTCTCAGTGAAG | + |
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Preference number: 1 (lower is better) Translates to: IAAQVPKRQGKSRGS*ANLMYSGSFILSVK Trigger: CTTCACTGAGAGAATGAAGCTACCACTGTACATCAGGTTGGCCCAGGAACCCCTGCTCTTTCCTTGCCTCTTTGGTACCTGAGCTGCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR CCA 90 bp | CCCTGCCACTTTATCGACTCTCAGGTTAGGGAGCAAAAGCAATTATaGAGTCGAATTTCAGAATGCTCAGGTGCAGCCCCATCAGGGCTC | + |
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Preference number: 1 (lower is better) Translates to: PCHFIDSQVREQKQL*SRISECSGAAPSGL Trigger: GAGCCCTGATGGGGCTGCACCTGAGCATTCTGAAATTCGACTCCATAATTGCTTTTGCTCCCTAACCTGAGAGTCGATAAAGTGGCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR TCA 90 bp | CTTGCTGCACAGTACCATAATCTCACAGGAAAGAGGCAAAGTGTTTaGAACTGTACCTGTACAGAGACACCACCACAGAGTGGGGAATCT | + |
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Preference number: 1 (lower is better) Translates to: LAAQYHNLTGKRQSV*NCTCTETPPQSGES Trigger: AGATTCCCCACTCTGTGGTGGTGTCTCTGTACAGGTACAGTTTCAAACACTTTGCCTCTTTCCTGTGAGATTATGGTACTGTGCAGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR TCA 90 bp | ACAATCAGACCTACTATGACTATGACAGTCCCTTCCCTACCATTCTaGATCCAACTAAGCCTTCTGGGAGTGAGCCTCAGTTGGGCATTA | + |
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Preference number: 1 (lower is better) Translates to: TIRPTMTMTVPSLPF*IQLSLLGVSLSWAL Trigger: TAATGCCCAACTGAGGCTCACTCCCAGAAGGCTTAGTTGGATTCAGAATGGTAGGGAAGGGACTGTCATAGTCATAGTAGGTCTGATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR TCA 90 bp | CTCAGTTGGGCATTAATTTACCCTTGCCAGAGCCTCCACAGTGAATaGAAAAATAAACAATCACGTATTTGGATGTGGACTATGGAAGCA | + |
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Preference number: 1 (lower is better) Translates to: LSWALIYPCQSLHSE*KNKQSRIWMWTMEA Trigger: TGCTTCCATAGTCCACATCCAAATACGTGATTGTTTATTTTTTCATTCACTGTGGAGGCTCTGGCAAGGGTAAATTAATGCCCAACTGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR CCA 90 bp | CATAAAAGCACACAGGAAGTACCTCAAGTTAAGACCAAATGGCAGTaGAAGAAGCTATGTCTCACACATATACAAACAGCTGACCTCTAT | + |
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Preference number: 1 (lower is better) Translates to: HKSTQEVPQVKTKWQ*KKLCLTHIQTADLY Trigger: ATAGAGGTCAGCTGTTTGTATATGTGTGAGACATAGCTTCTTCCACTGCCATTTGGTCTTAACTTGAGGTACTTCCTGTGTGCTTTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR-3UTR CCA 90 bp | CCTCTACCCTGCTGCAGGCCCTCCATGAGAGACTGTCTGTCTCTGGGACACAGTGGCCAGTGGGGACCATaGGAGGCTCGTCACTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: PLPCCRPSMRDCLSLGHSGQWGP*EARHCG Trigger: ACCACAGTGACGAGCCTCCCATGGTCCCCACTGGCC...ACTGTGTCCCAGAGACAGACAGTCTCTCATGGAGGGCCTGCAGCAGGGTAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR-3UTR TCA 90 bp | CCTGACTGTGGACCAAGCTGTGGGCGCAGTGCAGACATGCATGCCTGCCTGCAACACCAAATGGCACTGTaGCTGCCAAGCAGCCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: PDCGPSCGRSADMHACLQHQMAL*LPSSPS Trigger: GGAAGGGCTGCTTGGCAGTCACAGTGCCATTTGGTG...TTGCAGGCAGGCATGCATGTCTGCACTGCGCCCACAGCTTGGTCCACAGTCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR-3UTR TCA 90 bp | CCTCTACCCTGCTGCAGGCCCTCCATGAGAGACTGTCTGTCTCTGGGACACAGTGGTGCTGTGGAGAGATaGCAGAGCAGAAGTGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: PLPCCRPSMRDCLSLGHSGAVER*QSRSAG Trigger: GCCAGCACTTCTGCTCTGTCATCTCTCCACAGCACC...ACTGTGTCCCAGAGACAGACAGTCTCTCATGGAGGGCCTGCAGCAGGGTAGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR-3UTR CCA 90 bp | CCTCTACCCTGCTGCAGGCCCTCCATGAGAGACTGTCTGTCTCTGGGACACAGTAGGCAGCTGGGAGGGTaGCGATGGATGAAAGGCGTT | + |
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Preference number: 2 (lower is better) Translates to: PLPCCRPSMRDCLSLGHSRQLGG*RWMKGV Trigger: AACGCCTTTCATCCATCGCCACCCTCCCAGCTGCCT...ACTGTGTCCCAGAGACAGACAGTCTCTCATGGAGGGCCTGCAGCAGGGTAGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR-3UTR CCA 90 bp | AATTTCAGAATGCTCAGGTGCAGCCCCATCAGGGCTCCCATCGGAGGGATGAAAGGCCAGTGGGGACCATaGGAGGCTCGTCACTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: NFRMLRCSPIRAPIGGMKGQWGP*EARHCG Trigger: ACCACAGTGACGAGCCTCCCATGGTCCCCACTGGCC...TTTCATCCCTCCGATGGGAGCCCTGATGGGGCTGCACCTGAGCATTCTGAAATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR-3UTR CCA 90 bp | AATTTCAGAATGCTCAGGTGCAGCCCCATCAGGGCTCCCATCGGAGGGATGAAAAGCTTCCGAGGCCAGTaGGGACCATGGGAGGCTCGT | + |
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Preference number: 2 (lower is better) Translates to: NFRMLRCSPIRAPIGGMKSFRGQ*GPWEAR Trigger: ACGAGCCTCCCATGGTCCCCACTGGCCTCGGAAGCT...TTTCATCCCTCCGATGGGAGCCCTGATGGGGCTGCACCTGAGCATTCTGAAATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR-3UTR CCA 90 bp | AATTATGGAGTCGAATTTCAGAATGCTCAGGTGCAGCCCCATCAGGGCTCCCATAGCTTCCGAGGCCAGTaGGGACCATGGGAGGCTCGT | + |
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Preference number: 2 (lower is better) Translates to: NYGVEFQNAQVQPHQGSHSFRGQ*GPWEAR Trigger: ACGAGCCTCCCATGGTCCCCACTGGCCTCGGAAGCT...ATGGGAGCCCTGATGGGGCTGCACCTGAGCATTCTGAAATTCGACTCCATAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR-3UTR CCA 90 bp | CCTCTACCCTGCTGCAGGCCCTCCATGAGAGACTGTCTGTCTCTGGGACACAGTCTCCTCTTAAGGCACTaGGCAGTATCTTGGATGCGA | + |
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Preference number: 2 (lower is better) Translates to: PLPCCRPSMRDCLSLGHSLLLRH*AVSWMR Trigger: TCGCATCCAAGATACTGCCCAGTGCCTTAAGAGGAG...ACTGTGTCCCAGAGACAGACAGTCTCTCATGGAGGGCCTGCAGCAGGGTAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR-3UTR TCA 90 bp | GACTACCAGCCCCACAGGATGATGTCATGCATCCCAATCCACAGTGTCATGGGAACTGGCGCACATTCCTaGGTTCACAAAGGTGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: DYQPHRMMSCIPIHSVMGTGAHS*VHKGAV Trigger: CACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGT...TCCCATGACACTGTGGATTGGGATGCATGACATCATCCTGTGGGGCTGGTAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR-3UTR TCA 90 bp | CCTGACTGTGGACCAAGCTGTGGGCGCAGTGCAGACATGCATGCCTGCCTGCAAACTTCTAGTCTACCCTaGTTTGTGGTGTTGGTAATG | + |
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Preference number: 2 (lower is better) Translates to: PDCGPSCGRSADMHACLQTSSLP*FVVLVM Trigger: CATTACCAACACCACAAATCAGGGTAGACTAGAAGT...TTGCAGGCAGGCATGCATGTCTGCACTGCGCCCACAGCTTGGTCCACAGTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR-3UTR CCA 90 bp | ACTCTGCAAAGAGGGTGCAGGCGTCTCCTGGGAAAAGAGCAAACTCTCAAGTTCAGCAGCCCTTCCCACTaGCGCACATTCCTGAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: TLQRGCRRLLGKEQTLKFSSPSH*RTFLSS Trigger: TGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTGCT...GAACTTGAGAGTTTGCTCTTTTCCCAGGAGACGCCTGCACCCTCTTTGCAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR-3UTR CCA 90 bp | ACAGATGTGTCTCCTCTTAAGGCACTGGGCAGTATCTTGGATGCGACTTTAGGCGGAGGCTCGTCACTGTaGTGGCACAACCATCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: TDVSPLKALGSILDATLGGGSSL*WHNHPK Trigger: CTTGGGATGGTTGTGCCACCACAGTGACGAGCCTCC...GCCTAAAGTCGCATCCAAGATACTGCCCAGTGCCTTAAGAGGAGACACATCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR-3UTR TCA 90 bp | TTCCGATTACTACTCTGTTTATTCACACACCCAGCAACCTCTCTCACGTCCAGCGGTGCTGTGGAGAGATaGCAGAGCAGAAGTGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: FRLLLCLFTHPATSLTSSGAVER*QSRSAG Trigger: GCCAGCACTTCTGCTCTGTCATCTCTCCACAGCACC...GCTGGACGTGAGAGAGGTTGCTGGGTGTGTGAATAAACAGAGTAGTAATCGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR-3UTR TCA 90 bp | ACTCTGCAAAGAGGGTGCAGGCGTCTCCTGGGAAAAGAGCAAACTCTCAAGTTCACTGGCGCACATTCCTaGGTTCACAAAGGTGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: TLQRGCRRLLGKEQTLKFTGAHS*VHKGAV Trigger: CACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGT...GAACTTGAGAGTTTGCTCTTTTCCCAGGAGACGCCTGCACCCTCTTTGCAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR-3UTR TCA 90 bp | CCTGACTGTGGACCAAGCTGTGGGCGCAGTGCAGACATGCATGCCTGCCTGCAATGGGGTCTAGAATTCTaGGTTAAAAGCACCAATACA | + |
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Preference number: 2 (lower is better) Translates to: PDCGPSCGRSADMHACLQWGLEF*VKSTNT Trigger: TGTATTGGTGCTTTTAACTCAGAATTCTAGACCCCA...TTGCAGGCAGGCATGCATGTCTGCACTGCGCCCACAGCTTGGTCCACAGTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR-3UTR TCA 90 bp | GACTACCAGCCCCACAGGATGATGTCATGCATCCCAATCCACAGTGTCATGGGATTTCCCAGCTATCACTaGACTAGGAGTCTCTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: DYQPHRMMSCIPIHSVMGFPSYH*TRSLCS Trigger: GGAGCAGAGACTCCTAGTTCAGTGATAGCTGGGAAA...TCCCATGACACTGTGGATTGGGATGCATGACATCATCCTGTGGGGCTGGTAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR-3UTR TCA 90 bp | AATTTCAGAATGCTCAGGTGCAGCCCCATCAGGGCTCCCATCGGAGGGATGAAAGCTTCATTCTCTCAGTaGAGAGGCTCTTGGTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: NFRMLRCSPIRAPIGGMKASFSQ*RGSWSS Trigger: ACTGGACCAAGAGCCTCTTCACTGAGAGAATGAAGC...TTTCATCCCTCCGATGGGAGCCCTGATGGGGCTGCACCTGAGCATTCTGAAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR-3UTR TCA 90 bp | TTCAGAAGGGAGCTGTGGGCGTTTTCCTTGTCTGGCAAAGCCCAAAGCATTTTCACTTTGCTGTCCCTGTaGCTACCAGCCCCACAGGAT | + |
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Preference number: 2 (lower is better) Translates to: FRRELWAFSLSGKAQSIFTLLSL*LPAPQD Trigger: ATCCTGTGGGGCTGGTAGTCACAGGGACAGCAAAGT...GAAAATGCTTTGGGCTTTGCCAGACAAGGAAAACGCCCACAGCTCCCTTCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR-3UTR GCA 90 bp | TTCCGATTACTACTCTGTTTATTCACACACCCAGCAACCTCTCTCACGTCCAGCCCTCCCAGTGTCTTCTaGCCGCTTGCTGCACAGTAC | + |
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Preference number: 2 (lower is better) Translates to: FRLLLCLFTHPATSLTSSPPSVF*PLAAQY Trigger: GTACTGTGCAGCAAGCGGGCAGAAGACACTGGGAGG...GCTGGACGTGAGAGAGGTTGCTGGGTGTGTGAATAAACAGAGTAGTAATCGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR-3UTR GCA 90 bp | AATTATGGAGTCGAATTTCAGAATGCTCAGGTGCAGCCCCATCAGGGCTCCCATCAAAGTCCTCTACCCTaGTGCAGGCCCTCCATGAGA | + |
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Preference number: 2 (lower is better) Translates to: NYGVEFQNAQVQPHQGSHQSPLP*CRPSMR Trigger: TCTCATGGAGGGCCTGCAGCAGGGTAGAGGACTTTG...ATGGGAGCCCTGATGGGGCTGCACCTGAGCATTCTGAAATTCGACTCCATAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR-3UTR CCA 90 bp | ACAGATGTGTCTCCTCTTAAGGCACTGGGCAGTATCTTGGATGCGACTTTAGGCAGCAGCCCTTCCCACTaGCGCACATTCCTGAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: TDVSPLKALGSILDATLGSSPSH*RTFLSS Trigger: TGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTGCT...GCCTAAAGTCGCATCCAAGATACTGCCCAGTGCCTTAAGAGGAGACACATCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| 3UTR-3UTR CCA 90 bp | TTCAGAAGGGAGCTGTGGGCGTTTTCCTTGTCTGGCAAAGCCCAAAGCATTTTCGGCTCGTCACTGTGGTaGCACAACCATCCCAAGACT | + |
|
Preference number: 2 (lower is better) Translates to: FRRELWAFSLSGKAQSIFGSSLW*HNHPKT Trigger: AGTCTTGGGATGGTTGTGCCACCACAGTGACGAGCC...GAAAATGCTTTGGGCTTTGCCAGACAAGGAAAACGCCCACAGCTCCCTTCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR CAA 90 bp | CTGAGCCACAAATGTTCAAGCTCTAGAGAAGTGAGACGGGGTTCCTaGGATTCGGTCCTCAAGGAAAGGACAGTTTGCTCCCTTCTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: LSHKCSSSREVRRGS*DSVLKERTVCSLLP Trigger: TGGCAGAAGGGAGCAAACTGTCCTTTCCTTGAGGACCGAATCCAAGGAACCCCGTCTCACTTCTCTAGAGCTTGAACATTTGTGGCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR GCA 90 bp | AATTTCAGAATGCTCAGGTGCAGCCCCATCAGGGCTCCCATCGGAGGGATGAAATCCGTAACTGTCTTCTaGAAAGTCCTCTACCCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: NFRMLRCSPIRAPIGGMKSVTVF*KVLYPA Trigger: AGCAGGGTAGAGGACTTTGCAGAAGACAGTTACGGA...TTTCATCCCTCCGATGGGAGCCCTGATGGGGCTGCACCTGAGCATTCTGAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR CCA 90 bp | TTCCGATTACTACTCTGTTTATTCACACACCCAGCAACCTCTCTCACGTCCAGCGGCTCGTCACTGTGGTaGCACAACCATCCCAAGACT | + |
|
Preference number: 2 (lower is better) Translates to: FRLLLCLFTHPATSLTSSGSSLW*HNHPKT Trigger: AGTCTTGGGATGGTTGTGCCACCACAGTGACGAGCC...GCTGGACGTGAGAGAGGTTGCTGGGTGTGTGAATAAACAGAGTAGTAATCGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR CCA 90 bp | AATTATGGAGTCGAATTTCAGAATGCTCAGGTGCAGCCCCATCAGGGCTCCCATGGTGCAGGCGTCTCCTaGGAAAAGAGCAAACTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: NYGVEFQNAQVQPHQGSHGAGVS*EKSKLS Trigger: TGAGAGTTTGCTCTTTTCCCAGGAGACGCCTGCACC...ATGGGAGCCCTGATGGGGCTGCACCTGAGCATTCTGAAATTCGACTCCATAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR GCA 90 bp | AATTTCAGAATGCTCAGGTGCAGCCCCATCAGGGCTCCCATCGGAGGGATGAAAATGACAGAGCAGAAGTaGTGGCTAACAGACATGAGT | + |
|
Preference number: 2 (lower is better) Translates to: NFRMLRCSPIRAPIGGMKMTEQK*WLTDMS Trigger: ACTCATGTCTGTTAGCCAGCACTTCTGCTCTGTCAT...TTTCATCCCTCCGATGGGAGCCCTGATGGGGCTGCACCTGAGCATTCTGAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR GCA 90 bp | AAGAGAACATCCCCTGCCACTTTATCGACTCTCAGGTTAGGGAGCAAAAGCAATCAAAGTCCTCTACCCTaGTGCAGGCCCTCCATGAGA | + |
|
Preference number: 2 (lower is better) Translates to: KRTSPATLSTLRLGSKSNQSPLP*CRPSMR Trigger: TCTCATGGAGGGCCTGCAGCAGGGTAGAGGACTTTG...ATTGCTTTTGCTCCCTAACCTGAGAGTCGATAAAGTGGCAGGGGATGTTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR TCA 90 bp | AATTTCAGAATGCTCAGGTGCAGCCCCATCAGGGCTCCCATCGGAGGGATGAAAAAGAGGCAAAGTGTTTaGAACTGTACCTGTACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: NFRMLRCSPIRAPIGGMKKRQSV*NCTCTE Trigger: CTCTGTACAGGTACAGTTTCAAACACTTTGCCTCTT...TTTCATCCCTCCGATGGGAGCCCTGATGGGGCTGCACCTGAGCATTCTGAAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR TCA 90 bp | GACTACCAGCCCCACAGGATGATGTCATGCATCCCAATCCACAGTGTCATGGGACCTGTATCTACGAAATaGAGAACAAATGCCGTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: DYQPHRMMSCIPIHSVMGPVSTK*RTNAVC Trigger: ACACACGGCATTTGTTCTTCATTTCGTAGATACAGG...TCCCATGACACTGTGGATTGGGATGCATGACATCATCCTGTGGGGCTGGTAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR TCA 90 bp | AATTATGGAGTCGAATTTCAGAATGCTCAGGTGCAGCCCCATCAGGGCTCCCATCCTTCCCTACCATTCTaGATCCAACTAAGCCTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: NYGVEFQNAQVQPHQGSHPSLPF*IQLSLL Trigger: CAGAAGGCTTAGTTGGATTCAGAATGGTAGGGAAGG...ATGGGAGCCCTGATGGGGCTGCACCTGAGCATTCTGAAATTCGACTCCATAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR TCA 90 bp | GACTACCAGCCCCACAGGATGATGTCATGCATCCCAATCCACAGTGTCATGGGAACTTCTAGTCTACCCTaGTTTGTGGTGTTGGTAATG | + |
|
Preference number: 2 (lower is better) Translates to: DYQPHRMMSCIPIHSVMGTSSLP*FVVLVM Trigger: CATTACCAACACCACAAATCAGGGTAGACTAGAAGT...TCCCATGACACTGTGGATTGGGATGCATGACATCATCCTGTGGGGCTGGTAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR TCA 90 bp | TTCCGATTACTACTCTGTTTATTCACACACCCAGCAACCTCTCTCACGTCCAGCCAAGCTCTAGAGAAGTaGGACGGGGTTCCTTGGATT | + |
|
Preference number: 2 (lower is better) Translates to: FRLLLCLFTHPATSLTSSQALEK*DGVPWI Trigger: AATCCAAGGAACCCCGTCTCACTTCTCTAGAGCTTG...GCTGGACGTGAGAGAGGTTGCTGGGTGTGTGAATAAACAGAGTAGTAATCGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR GCA 90 bp | TTCAGAAGGGAGCTGTGGGCGTTTTCCTTGTCTGGCAAAGCCCAAAGCATTTTCTCCGTAACTGTCTTCTaGAAAGTCCTCTACCCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: FRRELWAFSLSGKAQSIFSVTVF*KVLYPA Trigger: AGCAGGGTAGAGGACTTTGCAGAAGACAGTTACGGA...GAAAATGCTTTGGGCTTTGCCAGACAAGGAAAACGCCCACAGCTCCCTTCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR CCA 90 bp | AAGAGAACATCCCCTGCCACTTTATCGACTCTCAGGTTAGGGAGCAAAAGCAATGGTGCAGGCGTCTCCTaGGAAAAGAGCAAACTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: KRTSPATLSTLRLGSKSNGAGVS*EKSKLS Trigger: TGAGAGTTTGCTCTTTTCCCAGGAGACGCCTGCACC...ATTGCTTTTGCTCCCTAACCTGAGAGTCGATAAAGTGGCAGGGGATGTTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR CCA 90 bp | GACTACCAGCCCCACAGGATGATGTCATGCATCCCAATCCACAGTGTCATGGGAGCAAAGAACAGAATCTaGTCACAGAAGAGAACATCC | + |
|
Preference number: 2 (lower is better) Translates to: DYQPHRMMSCIPIHSVMGAKNRI*SQKRTS Trigger: GGATGTTCTCTTCTGTGACCAGATTCTGTTCTTTGC...TCCCATGACACTGTGGATTGGGATGCATGACATCATCCTGTGGGGCTGGTAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR TCA 90 bp | AATTTCAGAATGCTCAGGTGCAGCCCCATCAGGGCTCCCATCGGAGGGATGAAATGGGGTCTAGAATTCTaGGTTAAAAGCACCAATACA | + |
|
Preference number: 2 (lower is better) Translates to: NFRMLRCSPIRAPIGGMKWGLEF*VKSTNT Trigger: TGTATTGGTGCTTTTAACTCAGAATTCTAGACCCCA...TTTCATCCCTCCGATGGGAGCCCTGATGGGGCTGCACCTGAGCATTCTGAAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR TCA 90 bp | CGATTGGCCATTTCATCTCTGAGTAAGCTTAGTTCCTTTGTAATTTTCTGGGTAGCTGCAGGCCCTCCATaGGAGACTGTCTGTCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: RLAISSLSKLSSFVIFWVAAGPP*ETVCLW Trigger: CCAGAGACAGACAGTCTCTCATGGAGGGCCTGCAGC...TACCCAGAAAATTACAAAGGAACTAAGCTTACTCAGAGATGAAATGGCCAATCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR GCA 90 bp | CAACTCCTGAGGCTTCCGATTACTACTCTGTTTATTCACACACCCAGCAACCTCCTGAGTTCACAAAGGTaGTGTGGAGAGATGACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: QLLRLPITTLFIHTPSNLLSSQR*CGEMTE Trigger: CTCTGTCATCTCTCCACAGCACCTTTGTGAACTCAG...GAGGTTGCTGGGTGTGTGAATAAACAGAGTAGTAATCGGAAGCCTCAGGAGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR GCA 90 bp | TTCCGATTACTACTCTGTTTATTCACACACCCAGCAACCTCTCTCACGTCCAGCAGTCGAATTTCAGAATaGTCAGGTGCAGCCCCATCA | + |
|
Preference number: 2 (lower is better) Translates to: FRLLLCLFTHPATSLTSSSRISE*SGAAPS Trigger: TGATGGGGCTGCACCTGAGCATTCTGAAATTCGACT...GCTGGACGTGAGAGAGGTTGCTGGGTGTGTGAATAAACAGAGTAGTAATCGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR CCA 90 bp | TTCAGAAGGGAGCTGTGGGCGTTTTCCTTGTCTGGCAAAGCCCAAAGCATTTTCACAGAGCAGAAGTGCTaGCTAACAGACATGAGTCTA | + |
|
Preference number: 2 (lower is better) Translates to: FRRELWAFSLSGKAQSIFTEQKC*LTDMSL Trigger: TAGACTCATGTCTGTTAGCCAGCACTTCTGCTCTGT...GAAAATGCTTTGGGCTTTGCCAGACAAGGAAAACGCCCACAGCTCCCTTCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR CCA 90 bp | TTCAGAAGGGAGCTGTGGGCGTTTTCCTTGTCTGGCAAAGCCCAAAGCATTTTCCAATCCACAGTGTCATaGGAAGGAACCTTTCAAACG | + |
|
Preference number: 2 (lower is better) Translates to: FRRELWAFSLSGKAQSIFQSTVS*EGTFQT Trigger: CGTTTGAAAGGTTCCTTCCCATGACACTGTGGATTG...GAAAATGCTTTGGGCTTTGCCAGACAAGGAAAACGCCCACAGCTCCCTTCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR CAA 90 bp | AACCTGATGTACAGTGGTAGCTTCATTCTCTCAGTGAAGAGGCTCTaGGTCCAGTGGTACAGGACAAATGCTCTGAATTCCAATCCCTAC | + |
|
Preference number: 2 (lower is better) Translates to: NLMYSGSFILSVKRL*VQWYRTNALNSNPY Trigger: GTAGGGATTGGAATTCAGAGCATTTGTCCTGTACCACTGGACCAAGAGCCTCTTCACTGAGAGAATGAAGCTACCACTGTACATCAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR TCA 90 bp | GAAATAAAGATGGAAATGTGCTTCAAGCTTCTGAATGGGAGCAACACTACAATAGTAGCTGGGACTGAATaGCACGGCTCCTCTGGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: EIKMEMCFKLLNGSNTTIVAGTE*HGSSGE Trigger: CTCCCCAGAGGAGCCGTGTCATTCAGTCCCAGCTAC...TATTGTAGTGTTGCTCCCATTCAGAAGCTTGAAGCACATTTCCATCTTTATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR GCA 90 bp | CGATTGGCCATTTCATCTCTGAGTAAGCTTAGTTCCTTTGTAATTTTCTGGGTAAGTCCTCTACCCTGCTaGAGGCCCTCCATGAGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: RLAISSLSKLSSFVIFWVSPLPC*RPSMRD Trigger: GTCTCTCATGGAGGGCCTGCAGCAGGGTAGAGGACT...TACCCAGAAAATTACAAAGGAACTAAGCTTACTCAGAGATGAAATGGCCAATCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR GCA 90 bp | GAAATAAAGATGGAAATGTGCTTCAAGCTTCTGAATGGGAGCAACACTACAATAGCTGGTGAGCTGACCTaGCAGGCACCTGACTGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: EIKMEMCFKLLNGSNTTIAGELT*QAPDCG Trigger: TCCACAGTCAGGTGCCTGGCAGGTCAGCTCACCAGC...TATTGTAGTGTTGCTCCCATTCAGAAGCTTGAAGCACATTTCCATCTTTATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR CCA 90 bp | TTCCGATTACTACTCTGTTTATTCACACACCCAGCAACCTCTCTCACGTCCAGCACAGAGCAGAAGTGCTaGCTAACAGACATGAGTCTA | + |
|
Preference number: 2 (lower is better) Translates to: FRLLLCLFTHPATSLTSSTEQKC*LTDMSL Trigger: TAGACTCATGTCTGTTAGCCAGCACTTCTGCTCTGT...GCTGGACGTGAGAGAGGTTGCTGGGTGTGTGAATAAACAGAGTAGTAATCGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR CCA 90 bp | CGATTGGCCATTTCATCTCTGAGTAAGCTTAGTTCCTTTGTAATTTTCTGGGTAAGGCAGCTGGGAGGGTaGCGATGGATGAAAGGCGTT | + |
|
Preference number: 2 (lower is better) Translates to: RLAISSLSKLSSFVIFWVRQLGG*RWMKGV Trigger: AACGCCTTTCATCCATCGCCACCCTCCCAGCTGCCT...TACCCAGAAAATTACAAAGGAACTAAGCTTACTCAGAGATGAAATGGCCAATCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR CCA 90 bp | TTCCGATTACTACTCTGTTTATTCACACACCCAGCAACCTCTCTCACGTCCAGCGCAGGCCCTGTGTACTaGGTTTTAAAAGCTTTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: FRLLLCLFTHPATSLTSSAGPVY*VLKAFL Trigger: CAAGAAAGCTTTTAAAACCCAGTACACAGGGCCTGC...GCTGGACGTGAGAGAGGTTGCTGGGTGTGTGAATAAACAGAGTAGTAATCGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR CCA 90 bp | CGATTGGCCATTTCATCTCTGAGTAAGCTTAGTTCCTTTGTAATTTTCTGGGTACATGCAACCCTGCAATaGGTGAAGCTGACGTCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: RLAISSLSKLSSFVIFWVHATLQ*VKLTSG Trigger: CCCAGACGTCAGCTTCACCCATTGCAGGGTTGCATG...TACCCAGAAAATTACAAAGGAACTAAGCTTACTCAGAGATGAAATGGCCAATCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR TCA 90 bp | TTCCGATTACTACTCTGTTTATTCACACACCCAGCAACCTCTCTCACGTCCAGCAGCCTCCACAGTGAATaGAAAAATAAACAATCACGT | + |
|
Preference number: 2 (lower is better) Translates to: FRLLLCLFTHPATSLTSSSLHSE*KNKQSR Trigger: ACGTGATTGTTTATTTTTTCATTCACTGTGGAGGCT...GCTGGACGTGAGAGAGGTTGCTGGGTGTGTGAATAAACAGAGTAGTAATCGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR GCA 90 bp | TTCCGATTACTACTCTGTTTATTCACACACCCAGCAACCTCTCTCACGTCCAGCATAAAGATGGAAATGTaGTTCAAGCTTCTGAATGGG | + |
|
Preference number: 2 (lower is better) Translates to: FRLLLCLFTHPATSLTSSIKMEM*FKLLNG Trigger: CCCATTCAGAAGCTTGAAGCACATTTCCATCTTTAT...GCTGGACGTGAGAGAGGTTGCTGGGTGTGTGAATAAACAGAGTAGTAATCGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR CCA 90 bp | CAACTCCTGAGGCTTCCGATTACTACTCTGTTTATTCACACACCCAGCAACCTCGAGCAAAAGCAATTATaGAGTCGAATTTCAGAATGC | + |
|
Preference number: 2 (lower is better) Translates to: QLLRLPITTLFIHTPSNLEQKQL*SRISEC Trigger: GCATTCTGAAATTCGACTCCATAATTGCTTTTGCTC...GAGGTTGCTGGGTGTGTGAATAAACAGAGTAGTAATCGGAAGCCTCAGGAGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR CCA 90 bp | CGATTGGCCATTTCATCTCTGAGTAAGCTTAGTTCCTTTGTAATTTTCTGGGTACCAGATCTAGGTTCATaGCTGCAGAAGAGTCACAGG | + |
|
Preference number: 2 (lower is better) Translates to: RLAISSLSKLSSFVIFWVPDLGS*LQKSHR Trigger: CCTGTGACTCTTCTGCAGCCATGAACCTAGATCTGG...TACCCAGAAAATTACAAAGGAACTAAGCTTACTCAGAGATGAAATGGCCAATCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR TCA 90 bp | GAAATAAAGATGGAAATGTGCTTCAAGCTTCTGAATGGGAGCAACACTACAATATTTCCCAGCTATCACTaGACTAGGAGTCTCTGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: EIKMEMCFKLLNGSNTTIFPSYH*TRSLCS Trigger: GGAGCAGAGACTCCTAGTTCAGTGATAGCTGGGAAA...TATTGTAGTGTTGCTCCCATTCAGAAGCTTGAAGCACATTTCCATCTTTATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR TCA 90 bp | AAGAGAACATCCCCTGCCACTTTATCGACTCTCAGGTTAGGGAGCAAAAGCAATAGCCTCCACAGTGAATaGAAAAATAAACAATCACGT | + |
|
Preference number: 2 (lower is better) Translates to: KRTSPATLSTLRLGSKSNSLHSE*KNKQSR Trigger: ACGTGATTGTTTATTTTTTCATTCACTGTGGAGGCT...ATTGCTTTTGCTCCCTAACCTGAGAGTCGATAAAGTGGCAGGGGATGTTCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR TCA 90 bp | GAAATAAAGATGGAAATGTGCTTCAAGCTTCTGAATGGGAGCAACACTACAATAGCTTCATTCTCTCAGTaGAGAGGCTCTTGGTCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: EIKMEMCFKLLNGSNTTIASFSQ*RGSWSS Trigger: ACTGGACCAAGAGCCTCTTCACTGAGAGAATGAAGC...TATTGTAGTGTTGCTCCCATTCAGAAGCTTGAAGCACATTTCCATCTTTATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR GCA 90 bp | AATTCTGAGTTAAAAGCACCAATACAAACCCTTCAAGATACACCTTGCCAGTGTATGACAGAGCAGAAGTaGTGGCTAACAGACATGAGT | + |
|
Preference number: 2 (lower is better) Translates to: NSELKAPIQTLQDTPCQCMTEQK*WLTDMS Trigger: ACTCATGTCTGTTAGCCAGCACTTCTGCTCTGTCAT...ACACTGGCAAGGTGTATCTTGAAGGGTTTGTATTGGTGCTTTTAACTCAGAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR TCA 90 bp | CGATTGGCCATTTCATCTCTGAGTAAGCTTAGTTCCTTTGTAATTTTCTGGGTAAAGAGGCAAAGTGTTTaGAACTGTACCTGTACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: RLAISSLSKLSSFVIFWVKRQSV*NCTCTE Trigger: CTCTGTACAGGTACAGTTTCAAACACTTTGCCTCTT...TACCCAGAAAATTACAAAGGAACTAAGCTTACTCAGAGATGAAATGGCCAATCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR TCA 90 bp | TTTAAAAGCTTTCTTGACTTGGGGACTAGACTATTAATTCACCTGGTTTCTAAGCCTTCCCTACCATTCTaGATCCAACTAAGCCTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: FKSFLDLGTRLLIHLVSKPSLPF*IQLSLL Trigger: CAGAAGGCTTAGTTGGATTCAGAATGGTAGGGAAGG...CTTAGAAACCAGGTGAATTAATAGTCTAGTCCCCAAGTCAAGAAAGCTTTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR GCA 90 bp | TTTAAAAGCTTTCTTGACTTGGGGACTAGACTATTAATTCACCTGGTTTCTAAGCTGAGTTCACAAAGGTaGTGTGGAGAGATGACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: FKSFLDLGTRLLIHLVSKLSSQR*CGEMTE Trigger: CTCTGTCATCTCTCCACAGCACCTTTGTGAACTCAG...CTTAGAAACCAGGTGAATTAATAGTCTAGTCCCCAAGTCAAGAAAGCTTTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR GCA 90 bp | GAAATAAAGATGGAAATGTGCTTCAAGCTTCTGAATGGGAGCAACACTACAATAAAGCATTTAGGACTTTaGTGTCCCTGTGACTACCAG | + |
|
Preference number: 2 (lower is better) Translates to: EIKMEMCFKLLNGSNTTIKHLGL*CPCDYQ Trigger: CTGGTAGTCACAGGGACAGCAAAGTCCTAAATGCTT...TATTGTAGTGTTGCTCCCATTCAGAAGCTTGAAGCACATTTCCATCTTTATTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR CAA 90 bp | AATGGGAGCAACACTACAATATGTTCAGAGAGTATGAGGTTTTGTTaGTTTGCTAGTAAGAAGATTTATGTGTGGCCTCCACATCTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: NGSNTTICSESMRFC*FASKKIYVWPPHLG Trigger: TCCAAGATGTGGAGGCCACACATAAATCTTCTTACTAGCAAACAAACAAAACCTCATACTCTCTGAACATATTGTAGTGTTGCTCCCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR CCA 90 bp | CGATTGGCCATTTCATCTCTGAGTAAGCTTAGTTCCTTTGTAATTTTCTGGGTACTTCAAGCTTCTGAATaGGAGCAACACTACAATATG | + |
|
Preference number: 2 (lower is better) Translates to: RLAISSLSKLSSFVIFWVLQASE*EQHYNM Trigger: CATATTGTAGTGTTGCTCCCATTCAGAAGCTTGAAG...TACCCAGAAAATTACAAAGGAACTAAGCTTACTCAGAGATGAAATGGCCAATCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR CCA 90 bp | CGATTGGCCATTTCATCTCTGAGTAAGCTTAGTTCCTTTGTAATTTTCTGGGTAGGTAAAATAAGAATCTaGCATTGTCAGGTGCTAGTC | + |
|
Preference number: 2 (lower is better) Translates to: RLAISSLSKLSSFVIFWVGKIRI*HCQVLV Trigger: GACTAGCACCTGACAATGCCAGATTCTTATTTTACC...TACCCAGAAAATTACAAAGGAACTAAGCTTACTCAGAGATGAAATGGCCAATCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR CCA 90 bp | TTTAAAAGCTTTCTTGACTTGGGGACTAGACTATTAATTCACCTGGTTTCTAAGGAGCAAAAGCAATTATaGAGTCGAATTTCAGAATGC | + |
|
Preference number: 2 (lower is better) Translates to: FKSFLDLGTRLLIHLVSKEQKQL*SRISEC Trigger: GCATTCTGAAATTCGACTCCATAATTGCTTTTGCTC...CTTAGAAACCAGGTGAATTAATAGTCTAGTCCCCAAGTCAAGAAAGCTTTTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR GCA 72 bp | ACAGCCGGCTTCCGGCAAACGGCTGGTGAGCTGACCTaGCAGGCACCTGACTGTGGACCAAGCTGTGGGCGC | + |
|
Preference number: 3 (lower is better) Translates to: TAGFRQTAGELT*QAPDCGPSCGR Trigger: GCGCCCACAGCTTGGTCCACAGTCAGGTGCCTGGCAGGTCAGCTCACCAGCCGTTTGCCGGAAGCCGGCTGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR TCA 72 bp | CCAAAACAGCCGGCTTCCGGCAAACGGCTGGTGAGCTaGCCTGCCAGGCACCTGACTGTGGACCAAGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: PKQPASGKRLVS*PARHLTVDQAV Trigger: CACAGCTTGGTCCACAGTCAGGTGCCTGGCAGGTCAGCTCACCAGCCGTTTGCCGGAAGCCGGCTGTTTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR TCA 72 bp | ACCCTGCAATGGGTGAAGCTGACGTCTGGGATTCAGTaGCCACCTACGAGCCTCCCAGTGTCTTCTGCCCGC | + |
|
Preference number: 3 (lower is better) Translates to: TLQWVKLTSGIQ*PPTSLPVSSAR Trigger: GCGGGCAGAAGACACTGGGAGGCTCGTAGGTGGTCACTGAATCCCAGACGTCAGCTTCACCCATTGCAGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR CAA 90 bp | CCTGACTGTGGACCAAGCTGTGGGCGCAGTGCAGACATGCATGCCTGCCTGCAAGTGTCTTCTGCCCGCTaGCTGCACAGTACCATAATC | + |
|
Preference number: 3 (lower is better) Translates to: PDCGPSCGRSADMHACLQVSSAR*LHSTII Trigger: GATTATGGTACTGTGCAGCAAGCGGGCAGAAGACAC...TTGCAGGCAGGCATGCATGTCTGCACTGCGCCCACAGCTTGGTCCACAGTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR CCA 72 bp | CCGAGGCCAGTGGGGACCATGGGAGGCTCGTCACTGTaGTGGCACAACCATCCCAAGACTAATTTCTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: PRPVGTMGGSSL*WHNHPKTNFSM Trigger: CATGGAGAAATTAGTCTTGGGATGGTTGTGCCACCACAGTGACGAGCCTCCCATGGTCCCCACTGGCCTCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR GCA 72 bp | GGAATCCCGATGAAACCTGTAGTACACCTAGGCCAGTaGCTGACACGTGCTTCCCAGGAAGTCCTAGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GIPMKPVVHLGQ*LTRASQEVLAA Trigger: GGCTGCTAGGACTTCCTGGGAAGCACGTGTCAGGCACTGGCCTAGGTGTACTACAGGTTTCATCGGGATTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR CCA 72 bp | TCTCCATGCAACCCTGCAATGGGTGAAGCTGACGTCTaGGATTCAGTGACCACCTACGAGCCTCCCAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SPCNPAMGEADV*DSVTTYEPPSV Trigger: GACACTGGGAGGCTCGTAGGTGGTCACTGAATCCCAGACGTCAGCTTCACCCATTGCAGGGTTGCATGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR CAA 90 bp | CCTGACTGTGGACCAAGCTGTGGGCGCAGTGCAGACATGCATGCCTGCCTGCAACACACAGTTACCTTATaGGCTAAGTCCTGCAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: PDCGPSCGRSADMHACLQHTVTL*AKSCRP Trigger: TGGTCTGCAGGACTTAGCCAATAAGGTAACTGTGTG...TTGCAGGCAGGCATGCATGTCTGCACTGCGCCCACAGCTTGGTCCACAGTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR TCA 72 bp | CCTTGCCAGTGTAAATGCACACACCAAATGGCACTGTaGCTGCCAAGCAGCCCTTCCCACTGGCGCACATTC | + |
|
Preference number: 3 (lower is better) Translates to: PCQCKCTHQMAL*LPSSPSHWRTF Trigger: GAATGTGCGCCAGTGGGAAGGGCTGCTTGGCAGTCACAGTGCCATTTGGTGTGTGCATTTACACTGGCAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR GCA 72 bp | CTGACTGTGGACCAAGCTGTGGGCGCAGTGCAGACATaGATGCCTGCCTGCAACCAAATAGACTCCAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: LTVDQAVGAVQT*MPACNQIDSRS Trigger: AGATCTGGAGTCTATTTGGTTGCAGGCAGGCATGCATGTCTGCACTGCGCCCACAGCTTGGTCCACAGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR GCA 72 bp | GCTGGGAAGGCCAGTGGCATAAGAATGGGACTTGTCTaGTGGCATGACACTGAGGGACAGTTGTTACCGGAG | + |
|
Preference number: 3 (lower is better) Translates to: AGKASGIRMGLV*WHDTEGQLLPE Trigger: CTCCGGTAACAACTGTCCCTCAGTGTCATGCCAGCAGACAAGTCCCATTCTTATGCCACTGGCCTTCCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR CCA 72 bp | AGGCCAGTGGGGACCATGGGAGGCTCGTCACTGTGGTaGCACAACCATCCCAAGACTAATTTCTCCATGCAA | + |
|
Preference number: 3 (lower is better) Translates to: RPVGTMGGSSLW*HNHPKTNFSMQ Trigger: TTGCATGGAGAAATTAGTCTTGGGATGGTTGTGCCACCACAGTGACGAGCCTCCCATGGTCCCCACTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR CCA 72 bp | CTTGGATGCGACTTTAGGCAGCTGGGAGGGTGGCGATaGATGAAAGGCGTTGAGACAGCAAAGGCTACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LGCDFRQLGGWR*MKGVETAKATL Trigger: CAGAGTAGCCTTTGCTGTCTCAACGCCTTTCATCCATCGCCACCCTCCCAGCTGCCTAAAGTCGCATCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR CCA 72 bp | GGGAAGGCCAGTGGCATAAGAATGGGACTTGTCTGCTaGCATGACACTGAGGGACAGTTGTTACCGGAGCGT | + |
|
Preference number: 3 (lower is better) Translates to: GKASGIRMGLVC*HDTEGQLLPER Trigger: ACGCTCCGGTAACAACTGTCCCTCAGTGTCATGCCAGCAGACAAGTCCCATTCTTATGCCACTGGCCTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR TCA 72 bp | TTCTGCAAAGTCCTCTACCCTGCTGCAGGCCCTCCATaGGAGACTGTCTGTCTCTGGGACACAGTAAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: FCKVLYPAAGPP*ETVCLWDTVRN Trigger: GTTCCTTACTGTGTCCCAGAGACAGACAGTCTCTCATGGAGGGCCTGCAGCAGGGTAGAGGACTTTGCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR GCA 72 bp | GGCGTTGAGACAGCAAAGGCTACTCTGCAAAGAGGGTaGAGGCGTCTCCTGGGAAAAGAGCAAACTCTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: GVETAKATLQRG*RRLLGKEQTLK Trigger: CTTGAGAGTTTGCTCTTTTCCCAGGAGACGCCTGCACCCTCTTTGCAGAGTAGCCTTTGCTGTCTCAACGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR GCA 72 bp | CAAGCTGTGGGCGCAGTGCAGACATGCATGCCTGCCTaGAACCAAATAGACTCCAGATCTAGGTTCATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QAVGAVQTCMPA*NQIDSRSRFMA Trigger: AGCCATGAACCTAGATCTGGAGTCTATTTGGTTGCAGGCAGGCATGCATGTCTGCACTGCGCCCACAGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR CCA 72 bp | CAGTATCTTGGATGCGACTTTAGGCAGCTGGGAGGGTaGCGATGGATGAAAGGCGTTGAGACAGCAAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QYLGCDFRQLGG*RWMKGVETAKA Trigger: AGCCTTTGCTGTCTCAACGCCTTTCATCCATCGCCACCCTCCCAGCTGCCTAAAGTCGCATCCAAGATACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR GCA 72 bp | AGGGAGCAAAAGCAATTATGGAGTCGAATTTCAGAATaGTCAGGTGCAGCCCCATCAGGGCTCCCATCGGAG | + |
|
Preference number: 3 (lower is better) Translates to: REQKQLWSRISE*SGAAPSGLPSE Trigger: CTCCGATGGGAGCCCTGATGGGGCTGCACCTGAGCATTCTGAAATTCGACTCCATAATTGCTTTTGCTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR CCA 72 bp | AAGATACACCTTGCCAGTGTAAATGCACACACCAAATaGCACTGTGACTGCCAAGCAGCCCTTCCCACTGGC | + |
|
Preference number: 3 (lower is better) Translates to: KIHLASVNAHTK*HCDCQAALPTG Trigger: GCCAGTGGGAAGGGCTGCTTGGCAGTCACAGTGCCATTTGGTGTGTGCATTTACACTGGCAAGGTGTATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR CAA 90 bp | CCTCTACCCTGCTGCAGGCCCTCCATGAGAGACTGTCTGTCTCTGGGACACAGTTTTGCTGGAAAGTTCTaGAAAGCCTGTCCTTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: PLPCCRPSMRDCLSLGHSFAGKF*KACPFT Trigger: TGTGAAAGGACAGGCTTTCAAGAACTTTCCAGCAAA...ACTGTGTCCCAGAGACAGACAGTCTCTCATGGAGGGCCTGCAGCAGGGTAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR CAA 90 bp | CCTCTACCCTGCTGCAGGCCCTCCATGAGAGACTGTCTGTCTCTGGGACACAGTAAAGAGGCAAAGTGTTaGAAACTGTACCTGTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: PLPCCRPSMRDCLSLGHSKEAKC*KLYLYR Trigger: TCTGTACAGGTACAGTTTCAAACACTTTGCCTCTTT...ACTGTGTCCCAGAGACAGACAGTCTCTCATGGAGGGCCTGCAGCAGGGTAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR CAA 90 bp | AATTATGGAGTCGAATTTCAGAATGCTCAGGTGCAGCCCCATCAGGGCTCCCATGTGTCTTCTGCCCGCTaGCTGCACAGTACCATAATC | + |
|
Preference number: 3 (lower is better) Translates to: NYGVEFQNAQVQPHQGSHVSSAR*LHSTII Trigger: GATTATGGTACTGTGCAGCAAGCGGGCAGAAGACAC...ATGGGAGCCCTGATGGGGCTGCACCTGAGCATTCTGAAATTCGACTCCATAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR CCA 72 bp | CAAAGGTGCTGTGGAGAGATGACAGAGCAGAAGTGCTaGCTAACAGACATGAGTCTAGCAACCCAGAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: QRCCGEMTEQKC*LTDMSLATQKP Trigger: TGGCTTCTGGGTTGCTAGACTCATGTCTGTTAGCCAGCACTTCTGCTCTGTCATCTCTCCACAGCACCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR CAA 90 bp | TTCCGATTACTACTCTGTTTATTCACACACCCAGCAACCTCTCTCACGTCCAGCTCCTGTACACCCATCTaGCTTCAGAAGGGAGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: FRLLLCLFTHPATSLTSSSCTPI*LQKGAV Trigger: CACAGCTCCCTTCTGAAGCAAGATGGGTGTACAGGA...GCTGGACGTGAGAGAGGTTGCTGGGTGTGTGAATAAACAGAGTAGTAATCGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR GCA 72 bp | TCACAAAGGTGCTGTGGAGAGATGACAGAGCAGAAGTaGTGGCTAACAGACATGAGTCTAGCAACCCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SQRCCGEMTEQK*WLTDMSLATQK Trigger: CTTCTGGGTTGCTAGACTCATGTCTGTTAGCCAGCACTTCTGCTCTGTCATCTCTCCACAGCACCTTTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR GCA 72 bp | AAAGCAATTATGGAGTCGAATTTCAGAATGCTCAGGTaGAGCCCCATCAGGGCTCCCATCGGAGGGATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: KAIMESNFRMLR*SPIRAPIGGMK Trigger: TTTCATCCCTCCGATGGGAGCCCTGATGGGGCTGCACCTGAGCATTCTGAAATTCGACTCCATAATTGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR CAA 90 bp | TTCCGATTACTACTCTGTTTATTCACACACCCAGCAACCTCTCTCACGTCCAGCGGGAGTGAGCCTCAGTaGGGCATTAATTTACCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: FRLLLCLFTHPATSLTSSGSEPQ*GINLPL Trigger: CAAGGGTAAATTAATGCCCAACTGAGGCTCACTCCC...GCTGGACGTGAGAGAGGTTGCTGGGTGTGTGAATAAACAGAGTAGTAATCGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR TCA 72 bp | CTGGACTGGATAGGGCCTGGTTTGCTGGAAAGTTCTTaGAAGCCTGTCCTTTCACAGATGTGTCTCCTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LDWIGPGLLESS*KPVLSQMCLLL Trigger: TAAGAGGAGACACATCTGTGAAAGGACAGGCTTTCAAGAACTTTCCAGCAAACCAGGCCCTATCCAGTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR TCA 72 bp | CCTACTATGACTATGACAGTCCCTTCCCTACCATTCTaGATCCAACTAAGCCTTCTGGGAGTGAGCCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: PTMTMTVPSLPF*IQLSLLGVSLS Trigger: ACTGAGGCTCACTCCCAGAAGGCTTAGTTGGATTCAGAATGGTAGGGAAGGGACTGTCATAGTCATAGTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR GCA 72 bp | AGTCACAGGAAAGGCTATTTTCCTGTACACCCATCTTaGTTCAGAAGGGAGCTGTGGGCGTTTTCCTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SHRKGYFPVHPS*FRRELWAFSLS Trigger: AGACAAGGAAAACGCCCACAGCTCCCTTCTGAAGCAAGATGGGTGTACAGGAAAATAGCCTTTCCTGTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR CCA 72 bp | CAAAGGCTACTCTGCAAAGAGGGTGCAGGCGTCTCCTaGGAAAAGAGCAAACTCTCAAGTTCTCCACATTTT | + |
|
Preference number: 3 (lower is better) Translates to: QRLLCKEGAGVS*EKSKLSSSPHF Trigger: AAAATGTGGAGAACTTGAGAGTTTGCTCTTTTCCCAGGAGACGCCTGCACCCTCTTTGCAGAGTAGCCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR CCA 72 bp | CCAGGAACACTGAGATTTTCTGGACTGGATAGGGCCTaGTTTGCTGGAAAGTTCTTGAAAGCCTGTCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PGTLRFSGLDRA*FAGKFLKACPF Trigger: GAAAGGACAGGCTTTCAAGAACTTTCCAGCAAACCAGGCCCTATCCAGTCCAGAAAATCTCAGTGTTCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR TCA 72 bp | AGAACAAATGCCGTGTGTGATTTTACCCAGGAACACTaGGATTTTCTGGACTGGATAGGGCCTGGTTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RTNAVCDFTQEH*DFLDWIGPGLL Trigger: CAGCAAACCAGGCCCTATCCAGTCCAGAAAATCTCAGTGTTCCTGGGTAAAATCACACACGGCATTTGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR CCA 72 bp | AGCTTCATTCTCTCAGTGAAGAGGCTCTTGGTCCAGTaGTACAGGACAAATGCTCTGAATTCCAATCCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: SFILSVKRLLVQ*YRTNALNSNPY Trigger: GTAGGGATTGGAATTCAGAGCATTTGTCCTGTACCACTGGACCAAGAGCCTCTTCACTGAGAGAATGAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR CAA 90 bp | AATTATGGAGTCGAATTTCAGAATGCTCAGGTGCAGCCCCATCAGGGCTCCCATAAAGAGGCAAAGTGTTaGAAACTGTACCTGTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: NYGVEFQNAQVQPHQGSHKEAKC*KLYLYR Trigger: TCTGTACAGGTACAGTTTCAAACACTTTGCCTCTTT...ATGGGAGCCCTGATGGGGCTGCACCTGAGCATTCTGAAATTCGACTCCATAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR CAA 90 bp | CGATTGGCCATTTCATCTCTGAGTAAGCTTAGTTCCTTTGTAATTTTCTGGGTAGCACTGGGCAGTATCTaGGATGCGACTTTAGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: RLAISSLSKLSSFVIFWVALGSI*DATLGS Trigger: GCTGCCTAAAGTCGCATCCAAGATACTGCCCAGTGC...TACCCAGAAAATTACAAAGGAACTAAGCTTACTCAGAGATGAAATGGCCAATCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR CAA 90 bp | CGATTGGCCATTTCATCTCTGAGTAAGCTTAGTTCCTTTGTAATTTTCTGGGTATGTGGCCTCCACATCTaGGAAGCAGAGAGTCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: RLAISSLSKLSSFVIFWVCGLHI*EAESPL Trigger: CAGTGGACTCTCTGCTTCCAAGATGTGGAGGCCACA...TACCCAGAAAATTACAAAGGAACTAAGCTTACTCAGAGATGAAATGGCCAATCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR CCA 72 bp | TTTATCGACTCTCAGGTTAGGGAGCAAAAGCAATTATaGAGTCGAATTTCAGAATGCTCAGGTGCAGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: FIDSQVREQKQL*SRISECSGAAP Trigger: TGGGGCTGCACCTGAGCATTCTGAAATTCGACTCCATAATTGCTTTTGCTCCCTAACCTGAGAGTCGATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR CAA 90 bp | CGATTGGCCATTTCATCTCTGAGTAAGCTTAGTTCCTTTGTAATTTTCTGGGTATCCTGTACACCCATCTaGCTTCAGAAGGGAGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: RLAISSLSKLSSFVIFWVSCTPI*LQKGAV Trigger: CACAGCTCCCTTCTGAAGCAAGATGGGTGTACAGGA...TACCCAGAAAATTACAAAGGAACTAAGCTTACTCAGAGATGAAATGGCCAATCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR TCA 72 bp | CTAGTCTACAGTGTAAGGAACTCAAGACCCAACTCCTaGGGCTTCCGATTACTACTCTGTTTATTCACACAC | + |
|
Preference number: 3 (lower is better) Translates to: LVYSVRNSRPNS*GFRLLLCLFTH Trigger: GTGTGTGAATAAACAGAGTAGTAATCGGAAGCCTCAGGAGTTGGGTCTTGAGTTCCTTACACTGTAGACTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR CAA 90 bp | CGATTGGCCATTTCATCTCTGAGTAAGCTTAGTTCCTTTGTAATTTTCTGGGTAGGGAGTGAGCCTCAGTaGGGCATTAATTTACCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: RLAISSLSKLSSFVIFWVGSEPQ*GINLPL Trigger: CAAGGGTAAATTAATGCCCAACTGAGGCTCACTCCC...TACCCAGAAAATTACAAAGGAACTAAGCTTACTCAGAGATGAAATGGCCAATCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR CCA 72 bp | AGGTTTTGTTTGTTTGCTAGTAAGAAGATTTATGTGTaGCCTCCACATCTTGGAAGCAGAGAGTCCACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: RFCLFASKKIYV*PPHLGSRESTA Trigger: TGCAGTGGACTCTCTGCTTCCAAGATGTGGAGGCCACACATAAATCTTCTTACTAGCAAACAAACAAAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR TCA 72 bp | TATGGAAGCAATGCCCTTTACCCTGTATCTACGAAATaGAGAACAAATGCCGTGTGTGATTTTACCCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: YGSNALYPVSTK*RTNAVCDFTQE Trigger: TTCCTGGGTAAAATCACACACGGCATTTGTTCTTCATTTCGTAGATACAGGGTAAAGGGCATTGCTTCCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR CCA 72 bp | ACACAGGAAGTACCTCAAGTTAAGACCAAATGGCAGTaGAAGAAGCTATGTCTCACACATATACAAACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TQEVPQVKTKWQ*KKLCLTHIQTA Trigger: AGCTGTTTGTATATGTGTGAGACATAGCTTCTTCCACTGCCATTTGGTCTTAACTTGAGGTACTTCCTGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR TCA 72 bp | CAAGAAGCTGTTCATAATATTATTACTACTAGTCTCTaGGTGTCTGCAGGATCTGCAGTGATGTCATCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: QEAVHNIITTSL*VSAGSAVMSSL Trigger: GAGAGATGACATCACTGCAGATCCTGCAGACACTCAGAGACTAGTAGTAATAATATTATGAACAGCTTCTTG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR GCA 72 bp | AACAATCACGTATTTGGATGTGGACTATGGAAGCAATaGCCTTTACCCTGTATCTACGAAATGAAGAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: NNHVFGCGLWKQ*PLPCIYEMKNK Trigger: TTTGTTCTTCATTTCGTAGATACAGGGTAAAGGGCATTGCTTCCATAGTCCACATCCAAATACGTGATTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR-3UTR CAA 90 bp | TTTAAAAGCTTTCTTGACTTGGGGACTAGACTATTAATTCACCTGGTTTCTAAGTTTGCTGGAAAGTTCTaGAAAGCCTGTCCTTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: FKSFLDLGTRLLIHLVSKFAGKF*KACPFT Trigger: TGTGAAAGGACAGGCTTTCAAGAACTTTCCAGCAAA...CTTAGAAACCAGGTGAATTAATAGTCTAGTCCCCAAGTCAAGAAAGCTTTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS-3UTR CCA 90 bp | CCTCTACCCTGCTGCAGGCCCTCCATGAGAGACTGTCTGTCTCTGGGACACAGTAATGGCATCCAGGATTaGCTGCCGCTTGGACCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PLPCCRPSMRDCLSLGHSNGIQD*LPLGPV Trigger: TACCGGTCCAAGCGGCAGCCAATCCTGGATGCCATT...ACTGTGTCCCAGAGACAGACAGTCTCTCATGGAGGGCCTGCAGCAGGGTAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS-3UTR CCA 90 bp | AATTTCAGAATGCTCAGGTGCAGCCCCATCAGGGCTCCCATCGGAGGGATGAAAGCTGTAGGAGCTGAGTaGCTGTGGCTCTCTGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: NFRMLRCSPIRAPIGGMKAVGAE*LWLSAP Trigger: CGGAGCAGAGAGCCACAGCCACTCAGCTCCTACAGC...TTTCATCCCTCCGATGGGAGCCCTGATGGGGCTGCACCTGAGCATTCTGAAATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR CCA 90 bp | AATTTCAGAATGCTCAGGTGCAGCCCCATCAGGGCTCCCATCGGAGGGATGAAATTCTCCTCGTCGTCCTaGTCCACTTCCCGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NFRMLRCSPIRAPIGGMKFSSSS*STSRCW Trigger: CCAGCAGCGGGAAGTGGACCAGGACGACGAGGAGAA...TTTCATCCCTCCGATGGGAGCCCTGATGGGGCTGCACCTGAGCATTCTGAAATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR CCA 90 bp | AATTTCAGAATGCTCAGGTGCAGCCCCATCAGGGCTCCCATCGGAGGGATGAAACTCCGCTCATCGTGCTaGCTACTCGGACAGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NFRMLRCSPIRAPIGGMKLRSSC*LLGQCP Trigger: TGGGCACTGTCCGAGTAGCCAGCACGATGAGCGGAG...TTTCATCCCTCCGATGGGAGCCCTGATGGGGCTGCACCTGAGCATTCTGAAATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR CCA 90 bp | CCTGACTGTGGACCAAGCTGTGGGCGCAGTGCAGACATGCATGCCTGCCTGCAAGTTGCCTCCTCTTCTTaGCTTCAATGGCATCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PDCGPSCGRSADMHACLQVASSS*LQWHPG Trigger: TCCTGGATGCCATTGAAGCCAAGAAGAGGAGGCAAC...TTGCAGGCAGGCATGCATGTCTGCACTGCGCCCACAGCTTGGTCCACAGTCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS-3UTR TCA 90 bp | ACTCTGCAAAGAGGGTGCAGGCGTCTCCTGGGAAAAGAGCAAACTCTCAAGTTCCCTCGTCCTCCGTGTTaGTCACCATGGTGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLQRGCRRLLGKEQTLKFPRPPC*SPWCPA Trigger: AGCTGGGCACCATGGTGATCAACACGGAGGACGAGG...GAACTTGAGAGTTTGCTCTTTTCCCAGGAGACGCCTGCACCCTCTTTGCAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR CCA 90 bp | GACTACCAGCCCCACAGGATGATGTCATGCATCCCAATCCACAGTGTCATGGGACGCTGCTGGGCTTCCTaGCGCTTCAGTTTCACATCC | + |
|
Preference number: 4 (lower is better) Translates to: DYQPHRMMSCIPIHSVMGRCWAS*RFSFTS Trigger: GGATGTGAAACTGAAGCGCCAGGAAGCCCAGCAGCG...TCCCATGACACTGTGGATTGGGATGCATGACATCATCCTGTGGGGCTGGTAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR GCA 90 bp | TTCCGATTACTACTCTGTTTATTCACACACCCAGCAACCTCTCTCACGTCCAGCTGGTCCACTTCCCGCTaGTGGGCTTCCTGGCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FRLLLCLFTHPATSLTSSWSTSR*WASWRF Trigger: GAAGCGCCAGGAAGCCCAGCAGCGGGAAGTGGACCA...GCTGGACGTGAGAGAGGTTGCTGGGTGTGTGAATAAACAGAGTAGTAATCGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR CCA 90 bp | ACAGATGTGTCTCCTCTTAAGGCACTGGGCAGTATCTTGGATGCGACTTTAGGCTCCACTTCCCGCTGCTaGGCTTCCTGGCGCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TDVSPLKALGSILDATLGSTSRC*ASWRFS Trigger: ACTGAAGCGCCAGGAAGCCCAGCAGCGGGAAGTGGA...GCCTAAAGTCGCATCCAAGATACTGCCCAGTGCCTTAAGAGGAGACACATCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR CCA 90 bp | AATTTCAGAATGCTCAGGTGCAGCCCCATCAGGGCTCCCATCGGAGGGATGAAATTTCCTGTTCCATCATaGGGTCGAGGGCCAAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NFRMLRCSPIRAPIGGMKFPVPS*GRGPRA Trigger: GGCTCTTGGCCCTCGACCCCATGATGGAACAGGAAA...TTTCATCCCTCCGATGGGAGCCCTGATGGGGCTGCACCTGAGCATTCTGAAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR CAA 72 bp | ACAGATGTGTCTCCTCTTAAGGCACTGGGCAGTATCTaGGATGCGACTTTAGGCAGCTGGGAGGGTGGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: TDVSPLKALGSI*DATLGSWEGGD Trigger: ATCGCCACCCTCCCAGCTGCCTAAAGTCGCATCCAAGATACTGCCCAGTGCCTTAAGAGGAGACACATCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS-3UTR GCA 90 bp | TTCAGAAGGGAGCTGTGGGCGTTTTCCTTGTCTGGCAAAGCCCAAAGCATTTTCGCATCCAGGATTGGCTaGCGCTTGGACCGGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: FRRELWAFSLSGKAQSIFASRIG*RLDRYF Trigger: GAAGTACCGGTCCAAGCGGCAGCCAATCCTGGATGC...GAAAATGCTTTGGGCTTTGCCAGACAAGGAAAACGCCCACAGCTCCCTTCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS-3UTR CCA 90 bp | CAACTCCTGAGGCTTCCGATTACTACTCTGTTTATTCACACACCCAGCAACCTCGGATTGGCTGCCGCTTaGACCGGTACTTCTGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QLLRLPITTLFIHTPSNLGLAAA*TGTSAG Trigger: TCCGGCAGAAGTACCGGTCCAAGCGGCAGCCAATCC...GAGGTTGCTGGGTGTGTGAATAAACAGAGTAGTAATCGGAAGCCTCAGGAGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS-3UTR CCA 90 bp | TTCCGATTACTACTCTGTTTATTCACACACCCAGCAACCTCTCTCACGTCCAGCGGATTGGCTGCCGCTTaGACCGGTACTTCTGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: FRLLLCLFTHPATSLTSSGLAAA*TGTSAG Trigger: TCCGGCAGAAGTACCGGTCCAAGCGGCAGCCAATCC...GCTGGACGTGAGAGAGGTTGCTGGGTGTGTGAATAAACAGAGTAGTAATCGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS-3UTR TCA 90 bp | ACAGATGTGTCTCCTCTTAAGGCACTGGGCAGTATCTTGGATGCGACTTTAGGCCCACGGGCACTTGCTTaGTTGCAACAATCTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TDVSPLKALGSILDATLGPRALA*LQQSGQ Trigger: CTGGCCAGATTGTTGCAATCAAGCAAGTGCCCGTGG...GCCTAAAGTCGCATCCAAGATACTGCCCAGTGCCTTAAGAGGAGACACATCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR GCA 90 bp | TTCAGAAGGGAGCTGTGGGCGTTTTCCTTGTCTGGCAAAGCCCAAAGCATTTTCACTTTTTCAGCTGCCTaGGCGGTGGGTTCCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FRRELWAFSLSGKAQSIFTFSAA*AVGSSA Trigger: AGCTGAGGAACCCACCGCGCAGGCAGCTGAAAAAGT...GAAAATGCTTTGGGCTTTGCCAGACAAGGAAAACGCCCACAGCTCCCTTCTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR GCA 90 bp | ACAGATGTGTCTCCTCTTAAGGCACTGGGCAGTATCTTGGATGCGACTTTAGGCGTGGCTGTGGCTCTCTaGTCCGGGCTTTTTACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TDVSPLKALGSILDATLGVAVAL*SGLFTR Trigger: TCTGGTAAAAAGCCCGGAGCAGAGAGCCACAGCCAC...GCCTAAAGTCGCATCCAAGATACTGCCCAGTGCCTTAAGAGGAGACACATCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR CCA 90 bp | AAGAGAACATCCCCTGCCACTTTATCGACTCTCAGGTTAGGGAGCAAAAGCAATGGAGCTGAGTGGCTGTaGCTCTCTGCTCCGGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KRTSPATLSTLRLGSKSNGAEWL*LSAPGF Trigger: AAAGCCCGGAGCAGAGAGCCACAGCCACTCAGCTCC...ATTGCTTTTGCTCCCTAACCTGAGAGTCGATAAAGTGGCAGGGGATGTTCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR CCA 90 bp | AATTTCAGAATGCTCAGGTGCAGCCCCATCAGGGCTCCCATCGGAGGGATGAAAGTTGCCTCCTCTTCTTaGCTTCAATGGCATCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NFRMLRCSPIRAPIGGMKVASSS*LQWHPG Trigger: TCCTGGATGCCATTGAAGCCAAGAAGAGGAGGCAAC...TTTCATCCCTCCGATGGGAGCCCTGATGGGGCTGCACCTGAGCATTCTGAAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS-3UTR TCA 90 bp | AATTATGGAGTCGAATTTCAGAATGCTCAGGTGCAGCCCCATCAGGGCTCCCATCATTTCATCCTCCTCTaGGTTCTCCTCGTCGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NYGVEFQNAQVQPHQGSHHFILL*VLLVVL Trigger: CAGGACGACGAGGAGAACTCAGAGGAGGATGAAATG...ATGGGAGCCCTGATGGGGCTGCACCTGAGCATTCTGAAATTCGACTCCATAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR TCA 90 bp | GACTACCAGCCCCACAGGATGATGTCATGCATCCCAATCCACAGTGTCATGGGACCACAGTCCAGCTCTTaGGAAACTCATAGTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DYQPHRMMSCIPIHSVMGPQSSS*ETHSLH Trigger: ATGGAGACTATGAGTTTCTCAAGAGCTGGACTGTGG...TCCCATGACACTGTGGATTGGGATGCATGACATCATCCTGTGGGGCTGGTAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS-3UTR GCA 90 bp | AATTTCAGAATGCTCAGGTGCAGCCCCATCAGGGCTCCCATCGGAGGGATGAAACAGAGACCAGATGTCTaGCACACAGTTGTACCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: NFRMLRCSPIRAPIGGMKQRPDV*HTVVPN Trigger: ATTGGGTACAACTGTGTGGCAGACATCTGGTCTCTG...TTTCATCCCTCCGATGGGAGCCCTGATGGGGCTGCACCTGAGCATTCTGAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR GCA 90 bp | ACTCTGCAAAGAGGGTGCAGGCGTCTCCTGGGAAAAGAGCAAACTCTCAAGTTCTTGGACCGGTACTTCTaGCGGATCTCTTCCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLQRGCRRLLGKEQTLKFLDRYF*RISSIS Trigger: GGAAATGGAAGAGATCCGGCAGAAGTACCGGTCCAA...GAACTTGAGAGTTTGCTCTTTTCCCAGGAGACGCCTGCACCCTCTTTGCAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS-3UTR TCA 90 bp | AATTATGGAGTCGAATTTCAGAATGCTCAGGTGCAGCCCCATCAGGGCTCCCATATCCATGAAGTTGTCTaGCCACAGCTCTGGCTTACG | + |
|
Preference number: 4 (lower is better) Translates to: NYGVEFQNAQVQPHQGSHIHEVV*PQLWLT Trigger: CGTAAGCCAGAGCTGTGGTCAGACAACTTCATGGAT...ATGGGAGCCCTGATGGGGCTGCACCTGAGCATTCTGAAATTCGACTCCATAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR GCA 90 bp | CAACTCCTGAGGCTTCCGATTACTACTCTGTTTATTCACACACCCAGCAACCTCTCCTTGATTATCTCCTaGAGGTCCGATTCCACGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QLLRLPITTLFIHTPSNLSLIIS*RSDSTG Trigger: GCCCGTGGAATCGGACCTGCAGGAGATAATCAAGGA...GAGGTTGCTGGGTGTGTGAATAAACAGAGTAGTAATCGGAAGCCTCAGGAGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR GCA 90 bp | ACTCTGCAAAGAGGGTGCAGGCGTCTCCTGGGAAAAGAGCAAACTCTCAAGTTCAAGGAAAGACGGTTTTaGAGGCTGCATGGTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TLQRGCRRLLGKEQTLKFKERRF*RLHGLI Trigger: GATGAGACCATGCAGCCTGCAAAACCGTCTTTCCTT...GAACTTGAGAGTTTGCTCTTTTCCCAGGAGACGCCTGCACCCTCTTTGCAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS-3UTR CCA 90 bp | AAGAGAACATCCCCTGCCACTTTATCGACTCTCAGGTTAGGGAGCAAAAGCAATAATGGCATCCAGGATTaGCTGCCGCTTGGACCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KRTSPATLSTLRLGSKSNNGIQD*LPLGPV Trigger: TACCGGTCCAAGCGGCAGCCAATCCTGGATGCCATT...ATTGCTTTTGCTCCCTAACCTGAGAGTCGATAAAGTGGCAGGGGATGTTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS-3UTR CCA 90 bp | TTCAGAAGGGAGCTGTGGGCGTTTTCCTTGTCTGGCAAAGCCCAAAGCATTTTCGTTTTGCAGGCTGCATaGTCTCATCTCTTCGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FRRELWAFSLSGKAQSIFVLQAA*SHLFVS Trigger: GGAGACGAAGAGATGAGACCATGCAGCCTGCAAAAC...GAAAATGCTTTGGGCTTTGCCAGACAAGGAAAACGCCCACAGCTCCCTTCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088291.5 |
||
| 3UTR CAA 72 bp | CCATCTTGCTTCAGAAGGGAGCTGTGGGCGTTTTCCTaGTCTGGCAAAGCCCAAAGCATTTTCCTTCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSCFRRELWAFS*SGKAQSIFLQE Trigger: CTCTTGAAGGAAAATGCTTTGGGCTTTGCCAGACAAGGAAAACGCCCACAGCTCCCTTCTGAAGCAAGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS-3UTR TCA 90 bp | ACAGATGTGTCTCCTCTTAAGGCACTGGGCAGTATCTTGGATGCGACTTTAGGCCCACAGTCCAGCTCTTaGGAAACTCATAGTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TDVSPLKALGSILDATLGPQSSS*ETHSLH Trigger: ATGGAGACTATGAGTTTCTCAAGAGCTGGACTGTGG...GCCTAAAGTCGCATCCAAGATACTGCCCAGTGCCTTAAGAGGAGACACATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS-3UTR GCA 90 bp | TTCAGAAGGGAGCTGTGGGCGTTTTCCTTGTCTGGCAAAGCCCAAAGCATTTTCAAGGAAAGACGGTTTTaGAGGCTGCATGGTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: FRRELWAFSLSGKAQSIFKERRF*RLHGLI Trigger: GATGAGACCATGCAGCCTGCAAAACCGTCTTTCCTT...GAAAATGCTTTGGGCTTTGCCAGACAAGGAAAACGCCCACAGCTCCCTTCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS-3UTR GCA 90 bp | CAACTCCTGAGGCTTCCGATTACTACTCTGTTTATTCACACACCCAGCAACCTCTTGGACCGGTACTTCTaGCGGATCTCTTCCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QLLRLPITTLFIHTPSNLLDRYF*RISSIS Trigger: GGAAATGGAAGAGATCCGGCAGAAGTACCGGTCCAA...GAGGTTGCTGGGTGTGTGAATAAACAGAGTAGTAATCGGAAGCCTCAGGAGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS-3UTR CCA 90 bp | AATTCTGAGTTAAAAGCACCAATACAAACCCTTCAAGATACACCTTGCCAGTGTACCATGGTGCCCAGCTaGGACGGCAACGTGTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: NSELKAPIQTLQDTPCQCTMVPS*DGNVSP Trigger: CGGTGACACGTTGCCGTCCCAGCTGGGCACCATGGT...ACACTGGCAAGGTGTATCTTGAAGGGTTTGTATTGGTGCTTTTAACTCAGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| 3UTR CAA 72 bp | TCTGGACTGGATAGGGCCTGGTTTGCTGGAAAGTTCTaGAAAGCCTGTCCTTTCACAGATGTGTCTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGLDRAWFAGKF*KACPFTDVSPL Trigger: AAGAGGAGACACATCTGTGAAAGGACAGGCTTTCAAGAACTTTCCAGCAAACCAGGCCCTATCCAGTCCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR CAA 72 bp | AAATGTTCAAGCTCTAGAGAAGTGAGACGGGGTTCCTaGGATTCGGTCCTCAAGGAAAGGACAGTTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KCSSSREVRRGS*DSVLKERTVCS Trigger: GGAGCAAACTGTCCTTTCCTTGAGGACCGAATCCAAGGAACCCCGTCTCACTTCTCTAGAGCTTGAACATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS-3UTR GCA 90 bp | TTCAGAAGGGAGCTGTGGGCGTTTTCCTTGTCTGGCAAAGCCCAAAGCATTTTCATCTGTAAGTTGACCTaGGACTCCAAAGTCTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FRRELWAFSLSGKAQSIFICKLT*DSKVCK Trigger: CTTGCAGACTTTGGAGTCGCAGGTCAACTTACAGAT...GAAAATGCTTTGGGCTTTGCCAGACAAGGAAAACGCCCACAGCTCCCTTCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR CCA 90 bp | ACTCTGCAAAGAGGGTGCAGGCGTCTCCTGGGAAAAGAGCAAACTCTCAAGTTCTCTGCAAGCTTTGCATaGCCTTCTGTGTTTAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TLQRGCRRLLGKEQTLKFSASFA*PSVFSK Trigger: TTTGCTAAACACAGAAGGCCATGCAAAGCTTGCAGA...GAACTTGAGAGTTTGCTCTTTTCCCAGGAGACGCCTGCACCCTCTTTGCAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR GCA 90 bp | AATTCTGAGTTAAAAGCACCAATACAAACCCTTCAAGATACACCTTGCCAGTGTTGGCTACTCGGACAGTaGCCATCTCATCACCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NSELKAPIQTLQDTPCQCWLLGQ*PSHHRQ Trigger: CTGCCGGTGATGAGATGGGCACTGTCCGAGTAGCCA...ACACTGGCAAGGTGTATCTTGAAGGGTTTGTATTGGTGCTTTTAACTCAGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR GCA 90 bp | AATTCTGAGTTAAAAGCACCAATACAAACCCTTCAAGATACACCTTGCCAGTGTGCATCCAGGATTGGCTaGCGCTTGGACCGGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: NSELKAPIQTLQDTPCQCASRIG*RLDRYF Trigger: GAAGTACCGGTCCAAGCGGCAGCCAATCCTGGATGC...ACACTGGCAAGGTGTATCTTGAAGGGTTTGTATTGGTGCTTTTAACTCAGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS-3UTR TCA 90 bp | GAAATAAAGATGGAAATGTGCTTCAAGCTTCTGAATGGGAGCAACACTACAATAGCCAAGAGCCTCTTCTaGAGGTCCTCCACAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EIKMEMCFKLLNGSNTTIAKSLF*RSSTVQ Trigger: CTGGACTGTGGAGGACCTTCAGAAGAGGCTCTTGGC...TATTGTAGTGTTGCTCCCATTCAGAAGCTTGAAGCACATTTCCATCTTTATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS-3UTR GCA 90 bp | TTCCGATTACTACTCTGTTTATTCACACACCCAGCAACCTCTCTCACGTCCAGCAACACTTCCTCGGGCTaGTTGGTTAAACTATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FRLLLCLFTHPATSLTSSNTSSG*LVKLSS Trigger: TGAAGATAGTTTAACCAAGCAGCCCGAGGAAGTGTT...GCTGGACGTGAGAGAGGTTGCTGGGTGTGTGAATAAACAGAGTAGTAATCGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR GCA 90 bp | TTTAAAAGCTTTCTTGACTTGGGGACTAGACTATTAATTCACCTGGTTTCTAAGCTCCTCCGCTCATCGTaGTGGCTACTCGGACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FKSFLDLGTRLLIHLVSKLLRSS*WLLGQC Trigger: GCACTGTCCGAGTAGCCAGCACGATGAGCGGAGGAG...CTTAGAAACCAGGTGAATTAATAGTCTAGTCCCCAAGTCAAGAAAGCTTTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR TCA 90 bp | TTTAAAAGCTTTCTTGACTTGGGGACTAGACTATTAATTCACCTGGTTTCTAAGGCCAAGAGCCTCTTCTaGAGGTCCTCCACAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FKSFLDLGTRLLIHLVSKAKSLF*RSSTVQ Trigger: CTGGACTGTGGAGGACCTTCAGAAGAGGCTCTTGGC...CTTAGAAACCAGGTGAATTAATAGTCTAGTCCCCAAGTCAAGAAAGCTTTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS-3UTR CCA 90 bp | GAAATAAAGATGGAAATGTGCTTCAAGCTTCTGAATGGGAGCAACACTACAATATTTCCTGTTCCATCATaGGGTCGAGGGCCAAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EIKMEMCFKLLNGSNTTIFPVPS*GRGPRA Trigger: GGCTCTTGGCCCTCGACCCCATGATGGAACAGGAAA...TATTGTAGTGTTGCTCCCATTCAGAAGCTTGAAGCACATTTCCATCTTTATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| 3UTR CAA 72 bp | AATTGTCCTAATTCTCTCTGTCACACAGTTACCTTATaGGCTAAGTCCTGCAGACCAGCTGCCTCTTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: NCPNSLCHTVTL*AKSCRPAASCI Trigger: AATGCAAGAGGCAGCTGGTCTGCAGGACTTAGCCAATAAGGTAACTGTGTGACAGAGAGAATTAGGACAATT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS-3UTR TCA 90 bp | CGATTGGCCATTTCATCTCTGAGTAAGCTTAGTTCCTTTGTAATTTTCTGGGTAAGCTGCCATAATACTTaGCTACGTGAGGGCTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RLAISSLSKLSSFVIFWVSCHNT*LREGCH Trigger: GTGACAGCCCTCACGTAGTCAAGTATTATGGCAGCT...TACCCAGAAAATTACAAAGGAACTAAGCTTACTCAGAGATGAAATGGCCAATCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR GCA 90 bp | CAACTCCTGAGGCTTCCGATTACTACTCTGTTTATTCACACACCCAGCAACCTCTACTGTATTCCTCTTTaGCATGGTATCTGTAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QLLRLPITTLFIHTPSNLYCIPL*HGICKL Trigger: CAACTTACAGATACCATGGCAAAGAGGAATACAGTA...GAGGTTGCTGGGTGTGTGAATAAACAGAGTAGTAATCGGAAGCCTCAGGAGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR GCA 90 bp | CGATTGGCCATTTCATCTCTGAGTAAGCTTAGTTCCTTTGTAATTTTCTGGGTACAGCTCGAACCATCGTaGCGGAATCCATTTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLAISSLSKLSSFVIFWVQLEPS*RNPFHP Trigger: AGGATGAAATGGATTCCGGCACGATGGTTCGAGCTG...TACCCAGAAAATTACAAAGGAACTAAGCTTACTCAGAGATGAAATGGCCAATCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR TCA 90 bp | AATTCTGAGTTAAAAGCACCAATACAAACCCTTCAAGATACACCTTGCCAGTGTGCTTCACAAAATCCATaGAGTTGTCTGACCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NSELKAPIQTLQDTPCQCASQNP*SCLTTA Trigger: AGCTGTGGTCAGACAACTTCATGGATTTTGTGAAGC...ACACTGGCAAGGTGTATCTTGAAGGGTTTGTATTGGTGCTTTTAACTCAGAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR GCA 90 bp | TTTAAAAGCTTTCTTGACTTGGGGACTAGACTATTAATTCACCTGGTTTCTAAGGGGCACTTGCTTGATTaGAACAATCTGGCCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FKSFLDLGTRLLIHLVSKGHLLD*NNLASL Trigger: GAGACTGGCCAGATTGTTGCAATCAAGCAAGTGCCC...CTTAGAAACCAGGTGAATTAATAGTCTAGTCCCCAAGTCAAGAAAGCTTTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR GCA 90 bp | CGATTGGCCATTTCATCTCTGAGTAAGCTTAGTTCCTTTGTAATTTTCTGGGTACTTTTTACCAGACACTaGTTCACAAAATCCATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RLAISSLSKLSSFVIFWVLFTRH*FTKSMK Trigger: CTTCATGGATTTTGTGAAGCAGTGTCTGGTAAAAAG...TACCCAGAAAATTACAAAGGAACTAAGCTTACTCAGAGATGAAATGGCCAATCG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR GCA 90 bp | GAAATAAAGATGGAAATGTGCTTCAAGCTTCTGAATGGGAGCAACACTACAATAAGGAATCATGAATATTaGCCTCATTGGATGGATATC | + |
|
Preference number: 4 (lower is better) Translates to: EIKMEMCFKLLNGSNTTIRNHEY*PHWMDI Trigger: GATATCCATCCAATGAGGGCAATATTCATGATTCCT...TATTGTAGTGTTGCTCCCATTCAGAAGCTTGAAGCACATTTCCATCTTTATTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| 3UTR CAA 72 bp | AACACTACAATATGTTCAGAGAGTATGAGGTTTTGTTaGTTTGCTAGTAAGAAGATTTATGTGTGGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NTTICSESMRFC*FASKKIYVWPP Trigger: TGGAGGCCACACATAAATCTTCTTACTAGCAAACAAACAAAACCTCATACTCTCTGAACATATTGTAGTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS CCA 90 bp | GTGCCGGAATCCATTTCATCCTCCTCTGAGTTCTCCTCGTCGTCCTaGTCCACTTCCCGCTGCTGGGCTTCCTGGCGCTTCAGTTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: VPESISSSSEFSSSS*STSRCWASWRFSFT Trigger: TGTGAAACTGAAGCGCCAGGAAGCCCAGCAGCGGGAAGTGGACCAGGACGACGAGGAGAACTCAGAGGAGGATGAAATGGATTCCGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000137866.2 |
||
| CDS GCA 90 bp | CTACTCGGACAGTGCCCATCTCATCACCGGCAGCTCGAACCATCGTaGCGGAATCCATTTCATCCTCCTCTGAGTTCTCCTCGTCGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLGQCPSHHRQLEPS*RNPFHPPLSSPRRP Trigger: AGGACGACGAGGAGAACTCAGAGGAGGATGAAATGGATTCCGGCACGATGGTTCGAGCTGCCGGTGATGAGATGGGCACTGTCCGAGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000137866.2 |
||
| CDS CCA 90 bp | TGGACCGGTACTTCTGCCGGATCTCTTCCATTTCCTGTTCCATCATaGGGTCGAGGGCCAAGAGCCTCTTCTGAAGGTCCTCCACAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: WTGTSAGSLPFPVPS*GRGPRASSEGPPQS Trigger: GGACTGTGGAGGACCTTCAGAAGAGGCTCTTGGCCCTCGACCCCATGATGGAACAGGAAATGGAAGAGATCCGGCAGAAGTACCGGTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS CCA 90 bp | GAGTTCTCCTCGTCGTCCTGGTCCACTTCCCGCTGCTGGGCTTCCTaGCGCTTCAGTTTCACATCCATGGCTTCGTTAATTAAGTCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: EFSSSSWSTSRCWAS*RFSFTSMASLIKSR Trigger: GCGAGACTTAATTAACGAAGCCATGGATGTGAAACTGAAGCGCCAGGAAGCCCAGCAGCGGGAAGTGGACCAGGACGACGAGGAGAACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000137866.2 |
||
| CDS CCA 90 bp | TCCTCCTCTGAGTTCTCCTCGTCGTCCTGGTCCACTTCCCGCTGCTaGGCTTCCTGGCGCTTCAGTTTCACATCCATGGCTTCGTTAATT | + |
|
Preference number: 5 (lower is better) Translates to: SSSEFSSSSWSTSRC*ASWRFSFTSMASLI Trigger: AATTAACGAAGCCATGGATGTGAAACTGAAGCGCCAGGAAGCCCAGCAGCGGGAAGTGGACCAGGACGACGAGGAGAACTCAGAGGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000137866.2 |
||
| CDS CCA 90 bp | GCCTCCTCTTCTTGGCTTCAATGGCATCCAGGATTGGCTGCCGCTTaGACCGGTACTTCTGCCGGATCTCTTCCATTTCCTGTTCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: ASSSWLQWHPGLAAA*TGTSAGSLPFPVPS Trigger: TGATGGAACAGGAAATGGAAGAGATCCGGCAGAAGTACCGGTCCAAGCGGCAGCCAATCCTGGATGCCATTGAAGCCAAGAAGAGGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS-3UTR CAA 90 bp | CCTCTACCCTGCTGCAGGCCCTCCATGAGAGACTGTCTGTCTCTGGGACACAGTCATGGTATCTGTAAGTaGACCTGCGACTCCAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PLPCCRPSMRDCLSLGHSHGICK*TCDSKV Trigger: GACTTTGGAGTCGCAGGTCAACTTACAGATACCATG...ACTGTGTCCCAGAGACAGACAGTCTCTCATGGAGGGCCTGCAGCAGGGTAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR CAA 90 bp | TTCCGATTACTACTCTGTTTATTCACACACCCAGCAACCTCTCTCACGTCCAGCAGGATTGGCTGCCGCTaGGACCGGTACTTCTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: FRLLLCLFTHPATSLTSSRIGCR*DRYFCR Trigger: CCGGCAGAAGTACCGGTCCAAGCGGCAGCCAATCCT...GCTGGACGTGAGAGAGGTTGCTGGGTGTGTGAATAAACAGAGTAGTAATCGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS-3UTR CAA 90 bp | ACAGATGTGTCTCCTCTTAAGGCACTGGGCAGTATCTTGGATGCGACTTTAGGCCAATGGCATCCAGGATaGGCTGCCGCTTGGACCGGT | + |
|
Preference number: 5 (lower is better) Translates to: TDVSPLKALGSILDATLGQWHPG*AAAWTG Trigger: ACCGGTCCAAGCGGCAGCCAATCCTGGATGCCATTG...GCCTAAAGTCGCATCCAAGATACTGCCCAGTGCCTTAAGAGGAGACACATCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS GCA 90 bp | TTCTGTTGCCTCCTCTTCTTGGCTTCAATGGCATCCAGGATTGGCTaGCGCTTGGACCGGTACTTCTGCCGGATCTCTTCCATTTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FCCLLFLASMASRIG*RLDRYFCRISSISC Trigger: ACAGGAAATGGAAGAGATCCGGCAGAAGTACCGGTCCAAGCGGCAGCCAATCCTGGATGCCATTGAAGCCAAGAAGAGGAGGCAACAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS CCA 90 bp | GAAGTTCTGTTGCCTCCTCTTCTTGGCTTCAATGGCATCCAGGATTaGCTGCCGCTTGGACCGGTACTTCTGCCGGATCTCTTCCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: EVLLPPLLGFNGIQD*LPLGPVLLPDLFHF Trigger: GAAATGGAAGAGATCCGGCAGAAGTACCGGTCCAAGCGGCAGCCAATCCTGGATGCCATTGAAGCCAAGAAGAGGAGGCAACAGAACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS-3UTR CAA 90 bp | CCTCTACCCTGCTGCAGGCCCTCCATGAGAGACTGTCTGTCTCTGGGACACAGTATGATGGAGATTTCCTaGATTATCTCCTGCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLPCCRPSMRDCLSLGHSMMEIS*IISCRS Trigger: GGACCTGCAGGAGATAATCAAGGAAATCTCCATCAT...ACTGTGTCCCAGAGACAGACAGTCTCTCATGGAGGGCCTGCAGCAGGGTAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS TCA 90 bp | CTCTCTGCTCCGGGCTTTTTACCAGACACTGCTTCACAAAATCCATaGAGTTGTCTGACCACAGCTCTGGCTTACGGAATGTGGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSAPGFLPDTASQNP*SCLTTALAYGMWEE Trigger: CTCCTCCCACATTCCGTAAGCCAGAGCTGTGGTCAGACAACTTCATGGATTTTGTGAAGCAGTGTCTGGTAAAAAGCCCGGAGCAGAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR CAA 90 bp | ACTCTGCAAAGAGGGTGCAGGCGTCTCCTGGGAAAAGAGCAAACTCTCAAGTTCCGATTCCACGGGCACTaGCTTGATTGCAACAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: TLQRGCRRLLGKEQTLKFRFHGH*LDCNNL Trigger: CAGATTGTTGCAATCAAGCAAGTGCCCGTGGAATCG...GAACTTGAGAGTTTGCTCTTTTCCCAGGAGACGCCTGCACCCTCTTTGCAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS TCA 90 bp | CGGGCTTTTTACCAGACACTGCTTCACAAAATCCATGAAGTTGTCTaGCCACAGCTCTGGCTTACGGAATGTGGGAGGAGGGTTTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: RAFYQTLLHKIHEVV*PQLWLTECGRRVCR Trigger: CCTACAAACCCTCCTCCCACATTCCGTAAGCCAGAGCTGTGGTCAGACAACTTCATGGATTTTGTGAAGCAGTGTCTGGTAAAAAGCCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR CAA 90 bp | TTCAGAAGGGAGCTGTGGGCGTTTTCCTTGTCTGGCAAAGCCCAAAGCATTTTCCAAGGAAAGACGGTTTaGCAGGCTGCATGGTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: FRRELWAFSLSGKAQSIFQGKTV*QAAWSH Trigger: ATGAGACCATGCAGCCTGCAAAACCGTCTTTCCTTG...GAAAATGCTTTGGGCTTTGCCAGACAAGGAAAACGCCCACAGCTCCCTTCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS TCA 90 bp | GGGGTCCCTATTACTGTATTCCTCTTTGCCATGGTATCTGTAAGTTaGCCTGCGACTCCAAAGTCTGCAAGCTTTGCATGGCCTTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GVPITVFLFAMVSVS*PATPKSASFAWPSV Trigger: CACAGAAGGCCATGCAAAGCTTGCAGACTTTGGAGTCGCAGGTCAACTTACAGATACCATGGCAAAGAGGAATACAGTAATAGGGACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR CAA 90 bp | ACAGATGTGTCTCCTCTTAAGGCACTGGGCAGTATCTTGGATGCGACTTTAGGCACTTCCTCGGGCTGCTaGGTTAAACTATCTTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: TDVSPLKALGSILDATLGTSSGC*VKLSSS Trigger: GGATGAAGATAGTTTAACCAAGCAGCCCGAGGAAGT...GCCTAAAGTCGCATCCAAGATACTGCCCAGTGCCTTAAGAGGAGACACATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR CAA 90 bp | GAAATAAAGATGGAAATGTGCTTCAAGCTTCTGAATGGGAGCAACACTACAATAAGGATTGGCTGCCGCTaGGACCGGTACTTCTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: EIKMEMCFKLLNGSNTTIRIGCR*DRYFCR Trigger: CCGGCAGAAGTACCGGTCCAAGCGGCAGCCAATCCT...TATTGTAGTGTTGCTCCCATTCAGAAGCTTGAAGCACATTTCCATCTTTATTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS-3UTR CAA 90 bp | GAAATAAAGATGGAAATGTGCTTCAAGCTTCTGAATGGGAGCAACACTACAATACAATGGCATCCAGGATaGGCTGCCGCTTGGACCGGT | + |
|
Preference number: 5 (lower is better) Translates to: EIKMEMCFKLLNGSNTTIQWHPG*AAAWTG Trigger: ACCGGTCCAAGCGGCAGCCAATCCTGGATGCCATTG...TATTGTAGTGTTGCTCCCATTCAGAAGCTTGAAGCACATTTCCATCTTTATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS CCA 90 bp | CTTTTTGTTCAAAGTATTCAAGGAAAGACGGTTTTGCAGGCTGCATaGTCTCATCTCTTCGTCTCCTTCGACACGTCCATCTATCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: LFVQSIQGKTVLQAA*SHLFVSFDTSIYQI Trigger: GATCTGATAGATGGACGTGTCGAAGGAGACGAAGAGATGAGACCATGCAGCCTGCAAAACCGTCTTTCCTTGAATACTTTGAACAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088291.5 |
||
| CDS-3UTR CAA 90 bp | AATTCTGAGTTAAAAGCACCAATACAAACCCTTCAAGATACACCTTGCCAGTGTCAAGGAAAGACGGTTTaGCAGGCTGCATGGTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: NSELKAPIQTLQDTPCQCQGKTV*QAAWSH Trigger: ATGAGACCATGCAGCCTGCAAAACCGTCTTTCCTTG...ACACTGGCAAGGTGTATCTTGAAGGGTTTGTATTGGTGCTTTTAACTCAGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS-3UTR CAA 90 bp | GAAATAAAGATGGAAATGTGCTTCAAGCTTCTGAATGGGAGCAACACTACAATATGCTCAATCATAGTATaGGCTCCTCCGCTCATCGTG | + |
|
Preference number: 5 (lower is better) Translates to: EIKMEMCFKLLNGSNTTICSIIV*APPLIV Trigger: CACGATGAGCGGAGGAGCCAATACTATGATTGAGCA...TATTGTAGTGTTGCTCCCATTCAGAAGCTTGAAGCACATTTCCATCTTTATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS-3UTR CAA 90 bp | CGATTGGCCATTTCATCTCTGAGTAAGCTTAGTTCCTTTGTAATTTTCTGGGTATTAAGTCTCGCAATATaGACACTCCTTTGGCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: RLAISSLSKLSSFVIFWVLSLAI*TLLWHS Trigger: AGAGTGCCAAAGGAGTGTCAATATTGCGAGACTTAA...TACCCAGAAAATTACAAAGGAACTAAGCTTACTCAGAGATGAAATGGCCAATCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
||
| CDS GCA 72 bp | TGGCTCCTCCGCTCATCGTGCTGGCTACTCGGACAGTaGCCATCTCATCACCGGCAGCTCGAACCATCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: WLLRSSCWLLGQ*PSHHRQLEPSC Trigger: GCACGATGGTTCGAGCTGCCGGTGATGAGATGGGCACTGTCCGAGTAGCCAGCACGATGAGCGGAGGAGCCA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000137866.2 |
||
| CDS CAA 90 bp | GTGCCCAGCTGGGACGGCAACGTGTCACCGTGCTCAATCATAGTATaGGCTCCTCCGCTCATCGTGCTGGCTACTCGGACAGTGCCCATC | + |
|
Preference number: 6 (lower is better) Translates to: VPSWDGNVSPCSIIV*APPLIVLATRTVPI Trigger: GATGGGCACTGTCCGAGTAGCCAGCACGATGAGCGGAGGAGCCAATACTATGATTGAGCACGGTGACACGTTGCCGTCCCAGCTGGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000137866.2 |
||
| CDS CCA 72 bp | GAGTTCTCCTCGTCGTCCTGGTCCACTTCCCGCTGCTaGGCTTCCTGGCGCTTCAGTTTCACATCCATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: EFSSSSWSTSRC*ASWRFSFTSMA Trigger: AGCCATGGATGTGAAACTGAAGCGCCAGGAAGCCCAGCAGCGGGAAGTGGACCAGGACGACGAGGAGAACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000137866.2 |
||
| CDS GCA 72 bp | CTCCTCTTCTTGGCTTCAATGGCATCCAGGATTGGCTaGCGCTTGGACCGGTACTTCTGCCGGATCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LLFLASMASRIG*RLDRYFCRISS Trigger: GGAAGAGATCCGGCAGAAGTACCGGTCCAAGCGGCAGCCAATCCTGGATGCCATTGAAGCCAAGAAGAGGAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS CCA 72 bp | TTGCCTCCTCTTCTTGGCTTCAATGGCATCCAGGATTaGCTGCCGCTTGGACCGGTACTTCTGCCGGATCTC | + |
|
Preference number: 6 (lower is better) Translates to: LPPLLGFNGIQD*LPLGPVLLPDL Trigger: GAGATCCGGCAGAAGTACCGGTCCAAGCGGCAGCCAATCCTGGATGCCATTGAAGCCAAGAAGAGGAGGCAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS CAA 72 bp | GTTGCCTCCTCTTCTTGGCTTCAATGGCATCCAGGATaGGCTGCCGCTTGGACCGGTACTTCTGCCGGATCT | + |
|
Preference number: 6 (lower is better) Translates to: VASSSWLQWHPG*AAAWTGTSAGS Trigger: AGATCCGGCAGAAGTACCGGTCCAAGCGGCAGCCAATCCTGGATGCCATTGAAGCCAAGAAGAGGAGGCAAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS GCA 72 bp | CAGTGCCCATCTCATCACCGGCAGCTCGAACCATCGTaGCGGAATCCATTTCATCCTCCTCTGAGTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: QCPSHHRQLEPS*RNPFHPPLSSP Trigger: AGGAGAACTCAGAGGAGGATGAAATGGATTCCGGCACGATGGTTCGAGCTGCCGGTGATGAGATGGGCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000137866.2 |
||
| CDS CCA 72 bp | TCGTCGTCCTGGTCCACTTCCCGCTGCTGGGCTTCCTaGCGCTTCAGTTTCACATCCATGGCTTCGTTAATT | + |
|
Preference number: 6 (lower is better) Translates to: SSSWSTSRCWAS*RFSFTSMASLI Trigger: AATTAACGAAGCCATGGATGTGAAACTGAAGCGCCAGGAAGCCCAGCAGCGGGAAGTGGACCAGGACGACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000137866.2 |
||
| CDS CAA 90 bp | TGCCTCCTCTTCTTGGCTTCAATGGCATCCAGGATTGGCTGCCGCTaGGACCGGTACTTCTGCCGGATCTCTTCCATTTCCTGTTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: CLLFLASMASRIGCR*DRYFCRISSISCSI Trigger: GATGGAACAGGAAATGGAAGAGATCCGGCAGAAGTACCGGTCCAAGCGGCAGCCAATCCTGGATGCCATTGAAGCCAAGAAGAGGAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS TCA 72 bp | TGTTCCATCATGGGGTCGAGGGCCAAGAGCCTCTTCTaGAGGTCCTCCACAGTCCAGCTCTTGAGAAACTCA | + |
|
Preference number: 6 (lower is better) Translates to: CSIMGSRAKSLF*RSSTVQLLRNS Trigger: TGAGTTTCTCAAGAGCTGGACTGTGGAGGACCTTCAGAAGAGGCTCTTGGCCCTCGACCCCATGATGGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS CCA 72 bp | ACTTCTGCCGGATCTCTTCCATTTCCTGTTCCATCATaGGGTCGAGGGCCAAGAGCCTCTTCTGAAGGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: TSAGSLPFPVPS*GRGPRASSEGP Trigger: AGGACCTTCAGAAGAGGCTCTTGGCCCTCGACCCCATGATGGAACAGGAAATGGAAGAGATCCGGCAGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
||
| CDS CCA 72 bp | TCTTGGCTTCAATGGCATCCAGGATTGGCTGCCGCTTaGACCGGTACTTCTGCCGGATCTCTTCCATTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SWLQWHPGLAAA*TGTSAGSLPFP Trigger: AGGAAATGGAAGAGATCCGGCAGAAGTACCGGTCCAAGCGGCAGCCAATCCTGGATGCCATTGAAGCCAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| CDS CAA 72 bp | TTCTTGGCTTCAATGGCATCCAGGATTGGCTGCCGCTaGGACCGGTACTTCTGCCGGATCTCTTCCATTTCC | + |
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Preference number: 6 (lower is better) Translates to: FLASMASRIGCR*DRYFCRISSIS Trigger: GGAAATGGAAGAGATCCGGCAGAAGTACCGGTCCAAGCGGCAGCCAATCCTGGATGCCATTGAAGCCAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| CDS CAA 90 bp | AGAAGTTCTGTTGCCTCCTCTTCTTGGCTTCAATGGCATCCAGGATaGGCTGCCGCTTGGACCGGTACTTCTGCCGGATCTCTTCCATTT | + |
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Preference number: 6 (lower is better) Translates to: RSSVASSSWLQWHPG*AAAWTGTSAGSLPF Trigger: AAATGGAAGAGATCCGGCAGAAGTACCGGTCCAAGCGGCAGCCAATCCTGGATGCCATTGAAGCCAAGAAGAGGAGGCAACAGAACTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018353.14 ENSMUST00000088291.5 |
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| CDS CAA 90 bp | TGCTCCGGGCTTTTTACCAGACACTGCTTCACAAAATCCATGAAGTaGTCTGACCACAGCTCTGGCTTACGGAATGTGGGAGGAGGGTTT | + |
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Preference number: 6 (lower is better) Translates to: CSGLFTRHCFTKSMK*SDHSSGLRNVGGGF Trigger: AAACCCTCCTCCCACATTCCGTAAGCCAGAGCTGTGGTCAGACAACTTCATGGATTTTGTGAAGCAGTGTCTGGTAAAAAGCCCGGAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
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| CDS CAA 90 bp | CGGGGTCCCTATTACTGTATTCCTCTTTGCCATGGTATCTGTAAGTaGACCTGCGACTCCAAAGTCTGCAAGCTTTGCATGGCCTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: RGPYYCIPLCHGICK*TCDSKVCKLCMAFC Trigger: ACAGAAGGCCATGCAAAGCTTGCAGACTTTGGAGTCGCAGGTCAACTTACAGATACCATGGCAAAGAGGAATACAGTAATAGGGACCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
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| CDS TCA 72 bp | CCGGGCTTTTTACCAGACACTGCTTCACAAAATCCATaGAGTTGTCTGACCACAGCTCTGGCTTACGGAATG | + |
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Preference number: 6 (lower is better) Translates to: PGFLPDTASQNP*SCLTTALAYGM Trigger: CATTCCGTAAGCCAGAGCTGTGGTCAGACAACTTCATGGATTTTGTGAAGCAGTGTCTGGTAAAAAGCCCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
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| CDS CCA 72 bp | CAAAGTATTCAAGGAAAGACGGTTTTGCAGGCTGCATaGTCTCATCTCTTCGTCTCCTTCGACACGTCCATC | + |
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Preference number: 6 (lower is better) Translates to: QSIQGKTVLQAA*SHLFVSFDTSI Trigger: GATGGACGTGTCGAAGGAGACGAAGAGATGAGACCATGCAGCCTGCAAAACCGTCTTTCCTTGAATACTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088291.5 |
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| CDS GCA 72 bp | TGTATTCCTCTTTGCCATGGTATCTGTAAGTTGACCTaGGACTCCAAAGTCTGCAAGCTTTGCATGGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: CIPLCHGICKLT*DSKVCKLCMAF Trigger: GAAGGCCATGCAAAGCTTGCAGACTTTGGAGTCGCAGGTCAACTTACAGATACCATGGCAAAGAGGAATACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
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| CDS GCA 72 bp | TGTTCAAAGTATTCAAGGAAAGACGGTTTTGCAGGCTaGATGGTCTCATCTCTTCGTCTCCTTCGACACGTC | + |
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Preference number: 6 (lower is better) Translates to: CSKYSRKDGFAG*MVSSLRLLRHV Trigger: GACGTGTCGAAGGAGACGAAGAGATGAGACCATGCAGCCTGCAAAACCGTCTTTCCTTGAATACTTTGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088291.5 |
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| CDS GCA 72 bp | CATCCAAAACGGGGTCCCTATTACTGTATTCCTCTTTaGCATGGTATCTGTAAGTTGACCTGCGACTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: HPKRGPYYCIPL*HGICKLTCDSK Trigger: TTTGGAGTCGCAGGTCAACTTACAGATACCATGGCAAAGAGGAATACAGTAATAGGGACCCCGTTTTGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
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| CDS CAA 72 bp | CTTTTTACCAGACACTGCTTCACAAAATCCATGAAGTaGTCTGACCACAGCTCTGGCTTACGGAATGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: LFTRHCFTKSMK*SDHSSGLRNVG Trigger: TCCCACATTCCGTAAGCCAGAGCTGTGGTCAGACAACTTCATGGATTTTGTGAAGCAGTGTCTGGTAAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
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| CDS TCA 72 bp | ATTACTGTATTCCTCTTTGCCATGGTATCTGTAAGTTaGCCTGCGACTCCAAAGTCTGCAAGCTTTGCATGG | + |
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Preference number: 6 (lower is better) Translates to: ITVFLFAMVSVS*PATPKSASFAW Trigger: CCATGCAAAGCTTGCAGACTTTGGAGTCGCAGGTCAACTTACAGATACCATGGCAAAGAGGAATACAGTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
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| CDS GCA 72 bp | TTCTTTTTGTTCAAAGTATTCAAGGAAAGACGGTTTTaGAGGCTGCATGGTCTCATCTCTTCGTCTCCTTCG | + |
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Preference number: 6 (lower is better) Translates to: FFLFKVFKERRF*RLHGLISSSPS Trigger: CGAAGGAGACGAAGAGATGAGACCATGCAGCCTGCAAAACCGTCTTTCCTTGAATACTTTGAACAAAAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088291.5 |
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| CDS CAA 72 bp | TATTACTGTATTCCTCTTTGCCATGGTATCTGTAAGTaGACCTGCGACTCCAAAGTCTGCAAGCTTTGCATG | + |
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Preference number: 6 (lower is better) Translates to: YYCIPLCHGICK*TCDSKVCKLCM Trigger: CATGCAAAGCTTGCAGACTTTGGAGTCGCAGGTCAACTTACAGATACCATGGCAAAGAGGAATACAGTAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018353.14 |
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| CDS CAA 72 bp | TTTCTTTTTGTTCAAAGTATTCAAGGAAAGACGGTTTaGCAGGCTGCATGGTCTCATCTCTTCGTCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: FLFVQSIQGKTV*QAAWSHLFVSF Trigger: GAAGGAGACGAAGAGATGAGACCATGCAGCCTGCAAAACCGTCTTTCCTTGAATACTTTGAACAAAAAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088291.5 |
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