Pregenerated sensors for STK39 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027030Ensembl transcript IDs: ENSMUST00000102715.4
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTCTTCACAATCTTCTTATTTGTTGGGATTTGGGAGTGAGGGGGTaGGAGGAAGGAGGCAAAGGGGGAGCTGGGAGAGGGAAGGGTCAC | + |
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Preference number: 1 (lower is better) Translates to: PLHNLLICWDLGVRG*EEGGKGGAGRGKGH Trigger: GTGACCCTTCCCTCTCCCAGCTCCCCCTTTGCCTCCTTCCTCTCACCCCCTCACTCCCAAATCCCAACAAATAAGAAGATTGTGAAGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR CCA 90 bp | TTTGCAAGGCACCTCCCTCTCCCAAGAGACGACTGGATTGTGGGCTaGATTTTAGGCAAACCAACCAAAAGAGCAAGCATCCAAATTCTT | + |
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Preference number: 1 (lower is better) Translates to: FARHLPLPRDDWIVG*ILGKPTKRASIQIL Trigger: AAGAATTTGGATGCTTGCTCTTTTGGTTGGTTTGCCTAAAATCCAGCCCACAATCCAGTCGTCTCTTGGGAGAGGGAGGTGCCTTGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR GCA 90 bp | CTAAGGTTTCCTGGGTTCATAATACACAGTCAAGCAGGAGGTTCTTaGGTTGGAAATATTTATTCTTCAACGTTTACAGCATTTTTACCG | + |
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Preference number: 1 (lower is better) Translates to: LRFPGFIIHSQAGGS*VGNIYSSTFTAFLP Trigger: CGGTAAAAATGCTGTAAACGTTGAAGAATAAATATTTCCAACGCAAGAACCTCCTGCTTGACTGTGTATTATGAACCCAGGAAACCTTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR CCA 90 bp | GTTTCCTGGGTTCATAATACACAGTCAAGCAGGAGGTTCTTGCGTTaGAAATATTTATTCTTCAACGTTTACAGCATTTTTACCGTTTGT | + |
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Preference number: 1 (lower is better) Translates to: VSWVHNTQSSRRFLR*KYLFFNVYSIFTVC Trigger: ACAAACGGTAAAAATGCTGTAAACGTTGAAGAATAAATATTTCCAACGCAAGAACCTCCTGCTTGACTGTGTATTATGAACCCAGGAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR-3UTR GCA 90 bp | TCGTTATATGAAAGTTTGCAAGGCACCTCCCTCTCCCAAGAGACGACTGGATTGCGCAGCTGTAGGGCTTaGCTGTGCTCACACTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: SLYESLQGTSLSQETTGLRSCRA*LCSHCG Trigger: CCCACAGTGTGAGCACAGGCAAGCCCTACAGCTGCG...CAATCCAGTCGTCTCTTGGGAGAGGGAGGTGCCTTGCAAACTTTCATATAACGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR-3UTR CCA 90 bp | TATGCCTCCTCGTGTAGTGCAGGTTTGAGATCTGAGACTAGTCCAGAGTTAAGCAGGCAAAGGGGGAGCTaGGAGAGGGAAGGGTCACGA | + |
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Preference number: 2 (lower is better) Translates to: YASSCSAGLRSETSPELSRQRGS*EREGSR Trigger: TCGTGACCCTTCCCTCTCCCAGCTCCCCCTTTGCCT...GCTTAACTCTGGACTAGTCTCAGATCTCAAACCTGCACTACACGAGGAGGCATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR CAA 90 bp | CTGCTAAGAATAGTAAATAGCTCTCTGGAAAGGAATCAGCAACAGTaGCGCAGCTGTAGGGCTTGCCTGTGCTCACACTGTGGGTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: LLRIVNSSLERNQQQ*RSCRACLCSHCGLL Trigger: CAGCAACCCACAGTGTGAGCACAGGCAAGCCCTACAGCTGCGCAACTGTTGCTGATTCCTTTCCAGAGAGCTATTTACTATTCTTAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR CAA 90 bp | TTTGATCGCACTTCATCGAAGCCAGCCTCTTCACAATCTTCTTATTaGTTGGGATTTGGGAGTGAGGGGGTGAGAGGAAGGAGGCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: FDRTSSKPASSQSSY*LGFGSEGVRGRRQR Trigger: CCTTTGCCTCCTTCCTCTCACCCCCTCACTCCCAAATCCCAACAAATAAGAAGATTGTGAAGAGGCTGGCTTCGATGAAGTGCGATCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR-3UTR GCA 90 bp | AAGGTTTCCTGGGTTCATAATACACAGTCAAGCAGGAGGTTCTTGCGTTGGAAATGTAGGGCTTGCCTGTaGTCACACTGTGGGTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: KVSWVHNTQSSRRFLRWKCRACL*SHCGLL Trigger: CAGCAACCCACAGTGTGAGCACAGGCAAGCCCTACA...TTTCCAACGCAAGAACCTCCTGCTTGACTGTGTATTATGAACCCAGGAAACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR-3UTR CCA 90 bp | TATGCCTCCTCGTGTAGTGCAGGTTTGAGATCTGAGACTAGTCCAGAGTTAAGCCACACTGTGGGTTGCTaGACAATAAAGCAGAACTCG | + |
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Preference number: 2 (lower is better) Translates to: YASSCSAGLRSETSPELSHTVGC*TIKQNS Trigger: CGAGTTCTGCTTTATTGTCCAGCAACCCACAGTGTG...GCTTAACTCTGGACTAGTCTCAGATCTCAAACCTGCACTACACGAGGAGGCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR CAA 90 bp | AATGTCCAGATGAAGCAAAAGTATGCCTCCTCGTGTAGTGCAGGTTaGAGATCTGAGACTAGTCCAGAGTTAAGCAGCCTCAGGCACATT | + |
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Preference number: 2 (lower is better) Translates to: NVQMKQKYASSCSAG*RSETSPELSSLRHI Trigger: AATGTGCCTGAGGCTGCTTAACTCTGGACTAGTCTCAGATCTCAAACCTGCACTACACGAGGAGGCATACTTTTGCTTCATCTGGACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR-3UTR TCA 90 bp | TCCCCGGAGCCCACCTTCTTGAAGGTCTTGACTCCAAATTTGAAACTTCTAAGGGGCACATTCGTTATATaGAAGTTTGCAAGGCACCTC | + |
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Preference number: 2 (lower is better) Translates to: SPEPTFLKVLTPNLKLLRGTFVI*KFARHL Trigger: GAGGTGCCTTGCAAACTTTCATATAACGAATGTGCC...CCTTAGAAGTTTCAAATTTGGAGTCAAGACCTTCAAGAAGGTGGGCTCCGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR-3UTR GCA 90 bp | TCGTTATATGAAAGTTTGCAAGGCACCTCCCTCTCCCAAGAGACGACTGGATTGGAAGATTCCTTTTGCTaGCAAGAGATAGGACCACCT | + |
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Preference number: 2 (lower is better) Translates to: SLYESLQGTSLSQETTGLEDSFC*QEIGPP Trigger: AGGTGGTCCTATCTCTTGGCAGCAAAAGGAATCTTC...CAATCCAGTCGTCTCTTGGGAGAGGGAGGTGCCTTGCAAACTTTCATATAACGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR CAA 90 bp | GTACCATCCCCGGAGCCCACCTTCTTGAAGGTCTTGACTCCAAATTaGAAACTTCTAAGGTTTCCTGGGTTCATAATACACAGTCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: VPSPEPTFLKVLTPN*KLLRFPGFIIHSQA Trigger: TGCTTGACTGTGTATTATGAACCCAGGAAACCTTAGAAGTTTCAAATTTGGAGTCAAGACCTTCAAGAAGGTGGGCTCCGGGGATGGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR-3UTR GCA 90 bp | TTGAGATCTGAGACTAGTCCAGAGTTAAGCAGCCTCAGGCACATTCGTTATATGGTAGAAGATTCCTTTTaGTGCCAAGAGATAGGACCA | + |
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Preference number: 2 (lower is better) Translates to: LRSETSPELSSLRHIRYMVEDSF*CQEIGP Trigger: TGGTCCTATCTCTTGGCAGCAAAAGGAATCTTCTAC...CATATAACGAATGTGCCTGAGGCTGCTTAACTCTGGACTAGTCTCAGATCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR-3UTR GCA 90 bp | GTCAAGCAGGAGGTTCTTGCGTTGGAAATATTTATTCTTCAACGTTTACAGCATCGTTATATGAAAGTTTaGAAGGCACCTCCCTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: VKQEVLALEIFILQRLQHRYMKV*KAPPSP Trigger: GGGAGAGGGAGGTGCCTTGCAAACTTTCATATAACG...ATGCTGTAAACGTTGAAGAATAAATATTTCCAACGCAAGAACCTCCTGCTTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR-3UTR CCA 90 bp | TCCCCGGAGCCCACCTTCTTGAAGGTCTTGACTCCAAATTTGAAACTTCTAAGGGTAAAACTTGGATTCTaGTGTTGTCAAGTTTATTGC | + |
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Preference number: 2 (lower is better) Translates to: SPEPTFLKVLTPNLKLLRVKLGF*CCQVYC Trigger: GCAATAAACTTGACAACACCAGAATCCAAGTTTTAC...CCTTAGAAGTTTCAAATTTGGAGTCAAGACCTTCAAGAAGGTGGGCTCCGGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR CAA 90 bp | TCTAAGGTTTCCTGGGTTCATAATACACAGTCAAGCAGGAGGTTCTaGCGTTGGAAATATTTATTCTTCAACGTTTACAGCATTTTTACC | + |
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Preference number: 2 (lower is better) Translates to: SKVSWVHNTQSSRRF*RWKYLFFNVYSIFT Trigger: GGTAAAAATGCTGTAAACGTTGAAGAATAAATATTTCCAACGCAAGAACCTCCTGCTTGACTGTGTATTATGAACCCAGGAAACCTTAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR GCA 72 bp | GCAGCTGTAGGGCTTGCCTGTGCTCACACTGTGGGTTaGTGGACAATAAAGCAGAACTCGGAGTGCTCACAG | + |
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Preference number: 3 (lower is better) Translates to: AAVGLACAHTVG*WTIKQNSECSQ Trigger: CTGTGAGCACTCCGAGTTCTGCTTTATTGTCCAGCAACCCACAGTGTGAGCACAGGCAAGCCCTACAGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR CCA 72 bp | GCTGTAGGGCTTGCCTGTGCTCACACTGTGGGTTGCTaGACAATAAAGCAGAACTCGGAGTGCTCACAGTTT | + |
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Preference number: 3 (lower is better) Translates to: AVGLACAHTVGC*TIKQNSECSQF Trigger: AAACTGTGAGCACTCCGAGTTCTGCTTTATTGTCCAGCAACCCACAGTGTGAGCACAGGCAAGCCCTACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR GCA 72 bp | GAAAGGAATCAGCAACAGTTGCGCAGCTGTAGGGCTTaGCTGTGCTCACACTGTGGGTTGCTGGACAATAAA | + |
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Preference number: 3 (lower is better) Translates to: ERNQQQLRSCRA*LCSHCGLLDNK Trigger: TTTATTGTCCAGCAACCCACAGTGTGAGCACAGGCAAGCCCTACAGCTGCGCAACTGTTGCTGATTCCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR CCA 72 bp | CACCTCCCTCTCCCAAGAGACGACTGGATTGTGGGCTaGATTTTAGGCAAACCAACCAAAAGAGCAAGCATC | + |
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Preference number: 3 (lower is better) Translates to: HLPLPRDDWIVG*ILGKPTKRASI Trigger: GATGCTTGCTCTTTTGGTTGGTTTGCCTAAAATCCAGCCCACAATCCAGTCGTCTCTTGGGAGAGGGAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR CCA 72 bp | AAGTTTGCAAGGCACCTCCCTCTCCCAAGAGACGACTaGATTGTGGGCTGGATTTTAGGCAAACCAACCAAA | + |
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Preference number: 3 (lower is better) Translates to: KFARHLPLPRDD*IVGWILGKPTK Trigger: TTTGGTTGGTTTGCCTAAAATCCAGCCCACAATCCAGTCGTCTCTTGGGAGAGGGAGGTGCCTTGCAAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR-3UTR CAA 90 bp | CTGGTAGAAGATTCCTTTTGCTGCCAAGAGATAGGACCACCTGAGTGTGTTTCCCAATCTTCTTATTTGTaGGGATTTGGGAGTGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: LVEDSFCCQEIGPPECVSQSSYL*GFGSEG Trigger: CCCCTCACTCCCAAATCCCAACAAATAAGAAGATTG...GGAAACACACTCAGGTGGTCCTATCTCTTGGCAGCAAAAGGAATCTTCTACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR-3UTR CAA 90 bp | CCCTCTCCCAAGAGACGACTGGATTGTGGGCTGGATTTTAGGCAAACCAACCAATCACAATCTTCTTATTaGTTGGGATTTGGGAGTGAG | + |
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Preference number: 3 (lower is better) Translates to: PSPKRRLDCGLDFRQTNQSQSSY*LGFGSE Trigger: CTCACTCCCAAATCCCAACAAATAAGAAGATTGTGA...TTGGTTGGTTTGCCTAAAATCCAGCCCACAATCCAGTCGTCTCTTGGGAGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR-3UTR CAA 90 bp | TATGCCTCCTCGTGTAGTGCAGGTTTGAGATCTGAGACTAGTCCAGAGTTAAGCTACGGGCTAGCCAAATaGACTGCTAAGAATAGTAAA | + |
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Preference number: 3 (lower is better) Translates to: YASSCSAGLRSETSPELSYGLAK*TAKNSK Trigger: TTTACTATTCTTAGCAGTCAATTTGGCTAGCCCGTA...GCTTAACTCTGGACTAGTCTCAGATCTCAAACCTGCACTACACGAGGAGGCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR-3UTR CAA 90 bp | CCTGGGTTCATAATACACAGTCAAGCAGGAGGTTCTTGCGTTGGAAATATTTATTCGTTATATGAAAGTTaGCAAGGCACCTCCCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: PGFIIHSQAGGSCVGNIYSLYES*QGTSLS Trigger: GGAGAGGGAGGTGCCTTGCAAACTTTCATATAACGA...ATAAATATTTCCAACGCAAGAACCTCCTGCTTGACTGTGTATTATGAACCCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR-3UTR CAA 90 bp | CTTGACTCCAAATTTGAAACTTCTAAGGTTTCCTGGGTTCATAATACACAGTCATGCTCACACTGTGGGTaGCTGGACAATAAAGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: LDSKFETSKVSWVHNTQSCSHCG*LDNKAE Trigger: TTCTGCTTTATTGTCCAGCAACCCACAGTGTGAGCA...TGACTGTGTATTATGAACCCAGGAAACCTTAGAAGTTTCAAATTTGGAGTCAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR-3UTR CAA 90 bp | AAGGTTTCCTGGGTTCATAATACACAGTCAAGCAGGAGGTTCTTGCGTTGGAAAATAACAAGAGATCAATaGCAGAAAGCGCGTAATCAA | + |
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Preference number: 3 (lower is better) Translates to: KVSWVHNTQSSRRFLRWKITRDQ*QKARNQ Trigger: TTGATTACGCGCTTTCTGCAATTGATCTCTTGTTAT...TTTCCAACGCAAGAACCTCCTGCTTGACTGTGTATTATGAACCCAGGAAACCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR GCA 72 bp | CCTGGGTTCATAATACACAGTCAAGCAGGAGGTTCTTaGGTTGGAAATATTTATTCTTCAACGTTTACAGCA | + |
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Preference number: 3 (lower is better) Translates to: PGFIIHSQAGGS*VGNIYSSTFTA Trigger: TGCTGTAAACGTTGAAGAATAAATATTTCCAACGCAAGAACCTCCTGCTTGACTGTGTATTATGAACCCAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR CCA 72 bp | GTTCATAATACACAGTCAAGCAGGAGGTTCTTGCGTTaGAAATATTTATTCTTCAACGTTTACAGCATTTTT | + |
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Preference number: 3 (lower is better) Translates to: VHNTQSSRRFLR*KYLFFNVYSIF Trigger: AAAAATGCTGTAAACGTTGAAGAATAAATATTTCCAACGCAAGAACCTCCTGCTTGACTGTGTATTATGAAC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR GCA 90 bp | AGGGCTTGCCTGTGCTCACACTGTGGGTTGCTGGACAATAAAGCAGAACTCGGATGGGAAAGCTGGACGTaGACAGGCGAGCCGCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: RACLCSHCGLLDNKAELGWESWT*TGEPLG Trigger: GCCGAGCGGCTCGCCTGTGCACGTCCAGCTTTCCCA...TCCGAGTTCTGCTTTATTGTCCAGCAACCCACAGTGTGAGCACAGGCAAGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR CCA 90 bp | GGAGAAAAGGCTTCTGGTAGAAGATTCCTTTTGCTGCCAAGAGATAGGACCACCACGCGTCCCTGCAGATaGGCCAGCCGACCGCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: GEKASGRRFLLLPRDRTTTRPCR*ASRPPE Trigger: CTCAGGCGGTCGGCTGGCCCATCTGCAGGGACGCGT...GGTGGTCCTATCTCTTGGCAGCAAAAGGAATCTTCTACCAGAAGCCTTTTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR CCA 90 bp | TATGCCTCCTCGTGTAGTGCAGGTTTGAGATCTGAGACTAGTCCAGAGTTAAGCGCCTGCTGGGAAAGCTaGACGTGCACAGGCGAGCCG | + |
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Preference number: 4 (lower is better) Translates to: YASSCSAGLRSETSPELSACWES*TCTGEP Trigger: CGGCTCGCCTGTGCACGTCCAGCTTTCCCAGCAGGC...GCTTAACTCTGGACTAGTCTCAGATCTCAAACCTGCACTACACGAGGAGGCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR CAA 72 bp | CGCAGCTGTAGGGCTTGCCTGTGCTCACACTGTGGGTaGCTGGACAATAAAGCAGAACTCGGAGTGCTCACA | + |
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Preference number: 4 (lower is better) Translates to: RSCRACLCSHCG*LDNKAELGVLT Trigger: TGTGAGCACTCCGAGTTCTGCTTTATTGTCCAGCAACCCACAGTGTGAGCACAGGCAAGCCCTACAGCTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR TCA 90 bp | TCCCCGGAGCCCACCTTCTTGAAGGTCTTGACTCCAAATTTGAAACTTCTAAGGTTGCATAGGGCTGCCTaGACCACCGCAGTTGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: SPEPTFLKVLTPNLKLLRLHRAA*TTAVAP Trigger: CGGAGCAACTGCGGTGGTTCAGGCAGCCCTATGCAA...CCTTAGAAGTTTCAAATTTGGAGTCAAGACCTTCAAGAAGGTGGGCTCCGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR GCA 90 bp | AGGAATCAGCAACAGTTGCGCAGCTGTAGGGCTTGCCTGTGCTCACACTGTGGGGTGGGCGGGTCATTTTaGAAAGTCAGCATTAGCACT | + |
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Preference number: 4 (lower is better) Translates to: RNQQQLRSCRACLCSHCGVGGSF*KVSIST Trigger: AGTGCTAATGCTGACTTTGCAAAATGACCCGCCCAC...CCCACAGTGTGAGCACAGGCAAGCCCTACAGCTGCGCAACTGTTGCTGATTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR CCA 90 bp | CCCTCTCCCAAGAGACGACTGGATTGTGGGCTGGATTTTAGGCAAACCAACCAACTACGCGTTCTTGCCTaGGTTTGCATAGGGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: PSPKRRLDCGLDFRQTNQLRVLA*VCIGLP Trigger: AGGCAGCCCTATGCAAACCCAGGCAAGAACGCGTAG...TTGGTTGGTTTGCCTAAAATCCAGCCCACAATCCAGTCGTCTCTTGGGAGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR CCA 90 bp | AGGGCTTGCCTGTGCTCACACTGTGGGTTGCTGGACAATAAAGCAGAACTCGGAGTCACTACGTTGGGATaGCTGCATTGGCTCATGGCT | + |
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Preference number: 4 (lower is better) Translates to: RACLCSHCGLLDNKAELGVTTLG*LHWLMA Trigger: AGCCATGAGCCAATGCAGCCATCCCAACGTAGTGAC...TCCGAGTTCTGCTTTATTGTCCAGCAACCCACAGTGTGAGCACAGGCAAGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR GCA 90 bp | GTTAGCAATCTAACAGAACGGCAGCAAGGTTACAGTATTCTAAATGTCCAGATGGCTCGTACGCGTCCCTaGAGATGGGCCAGCCGACCG | + |
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Preference number: 4 (lower is better) Translates to: VSNLTERQQGYSILNVQMARTRP*RWASRP Trigger: CGGTCGGCTGGCCCATCTGCAGGGACGCGTACGAGC...CATCTGGACATTTAGAATACTGTAACCTTGCTGCCGTTCTGTTAGATTGCTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR TCA 90 bp | TTTTGCTGCCAAGAGATAGGACCACCTGAGTGTGTTTCCGACGCCTCACTTACGGGCATTTTTCCAAGTTaGTCCGCTTTATGGCTACGC | + |
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Preference number: 4 (lower is better) Translates to: FCCQEIGPPECVSDASLTGIFPS*SALWLR Trigger: GCGTAGCCATAAAGCGGATCAACTTGGAAAAATGCC...CGTAAGTGAGGCGTCGGAAACACACTCAGGTGGTCCTATCTCTTGGCAGCAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR CAA 72 bp | GTTAAGCAGCCTCAGGCACATTCGTTATATGAAAGTTaGCAAGGCACCTCCCTCTCCCAAGAGACGACTGGA | + |
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Preference number: 4 (lower is better) Translates to: VKQPQAHSLYES*QGTSLSQETTG Trigger: TCCAGTCGTCTCTTGGGAGAGGGAGGTGCCTTGCAAACTTTCATATAACGAATGTGCCTGAGGCTGCTTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR TCA 90 bp | AGGGCTTGCCTGTGCTCACACTGTGGGTTGCTGGACAATAAAGCAGAACTCGGATTGGAAGGATCTTTCTaGAGACACAGTGACAGTAAC | + |
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Preference number: 4 (lower is better) Translates to: RACLCSHCGLLDNKAELGLEGSF*RHSDSN Trigger: GTTACTGTCACTGTGTCTTCAGAAAGATCCTTCCAA...TCCGAGTTCTGCTTTATTGTCCAGCAACCCACAGTGTGAGCACAGGCAAGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR CCA 90 bp | ACCATCCCCGGAGCCCACCTTCTTGAAGGTCTTGACTCCAAATTTGAAACTTCTTCTTTGGGCTATGTCTaGGGTTCTTGTCAGCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: TIPGAHLLEGLDSKFETSSLGYV*GSCQQL Trigger: AAGCTGCTGACAAGAACCCCAGACATAGCCCAAAGA...AGAAGTTTCAAATTTGGAGTCAAGACCTTCAAGAAGGTGGGCTCCGGGGATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR CCA 90 bp | GTCAAGCAGGAGGTTCTTGCGTTGGAAATATTTATTCTTCAACGTTTACAGCATCTTCGTGACTTCTCTTaGGAGGCGGCTGCCTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: VKQEVLALEIFILQRLQHLRDFS*EAAAFP Trigger: GGGGAAGGCAGCCGCCTCCCAAGAGAAGTCACGAAG...ATGCTGTAAACGTTGAAGAATAAATATTTCCAACGCAAGAACCTCCTGCTTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR TCA 90 bp | AGTCCAGAGTTAAGCAGCCTCAGGCACATTCGTTATATGAAAGTTTGCAAGGCATTCTTTTACTCTTCGTaGCTTCTCTTGGGAGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: SPELSSLRHIRYMKVCKAFFYSS*LLLGGG Trigger: GCCGCCTCCCAAGAGAAGTCACGAAGAGTAAAAGAA...TGCCTTGCAAACTTTCATATAACGAATGTGCCTGAGGCTGCTTAACTCTGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR CCA 90 bp | GGAGAAAAGGCTTCTGGTAGAAGATTCCTTTTGCTGCCAAGAGATAGGACCACCAATAAGTCACTACGTTaGGATGGCTGCATTGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: GEKASGRRFLLLPRDRTTNKSLR*DGCIGS Trigger: TGAGCCAATGCAGCCATCCCAACGTAGTGACTTATT...GGTGGTCCTATCTCTTGGCAGCAAAAGGAATCTTCTACCAGAAGCCTTTTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR CCA 90 bp | AGTCCAGAGTTAAGCAGCCTCAGGCACATTCGTTATATGAAAGTTTGCAAGGCACTCGCCTTACCTTCTTaGCTCTTTGGGCTATGTCTG | + |
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Preference number: 4 (lower is better) Translates to: SPELSSLRHIRYMKVCKALALPS*LFGLCL Trigger: CAGACATAGCCCAAAGAGCCAAGAAGGTAAGGCGAG...TGCCTTGCAAACTTTCATATAACGAATGTGCCTGAGGCTGCTTAACTCTGGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR CCA 90 bp | GGAGAAAAGGCTTCTGGTAGAAGATTCCTTTTGCTGCCAAGAGATAGGACCACCACTATAACTACATCATaGCCGTCAACCAAGCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GEKASGRRFLLLPRDRTTTITTS*PSTKPA Trigger: TGCTGGCTTGGTTGACGGCCATGATGTAGTTATAGT...GGTGGTCCTATCTCTTGGCAGCAAAAGGAATCTTCTACCAGAAGCCTTTTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR CAA 72 bp | ATGAAGCAAAAGTATGCCTCCTCGTGTAGTGCAGGTTaGAGATCTGAGACTAGTCCAGAGTTAAGCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: MKQKYASSCSAG*RSETSPELSSL Trigger: GAGGCTGCTTAACTCTGGACTAGTCTCAGATCTCAAACCTGCACTACACGAGGAGGCATACTTTTGCTTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR TCA 90 bp | TCCCCGGAGCCCACCTTCTTGAAGGTCTTGACTCCAAATTTGAAACTTCTAAGGCATTGGCTCATGGCTTaGATTTCTTTCAGGAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: SPEPTFLKVLTPNLKLLRHWLMA*ISFRSS Trigger: TGAACTCCTGAAAGAAATTCAAGCCATGAGCCAATG...CCTTAGAAGTTTCAAATTTGGAGTCAAGACCTTCAAGAAGGTGGGCTCCGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR TCA 90 bp | AAGGTTTCCTGGGTTCATAATACACAGTCAAGCAGGAGGTTCTTGCGTTGGAAAATCTGCTATTTGTACTaGGCCATCCTCACCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: KVSWVHNTQSSRRFLRWKICYLY*AILTQK Trigger: CTTCTGGGTGAGGATGGCTCAGTACAAATAGCAGAT...TTTCCAACGCAAGAACCTCCTGCTTGACTGTGTATTATGAACCCAGGAAACCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR TCA 90 bp | CTGGTAGAAGATTCCTTTTGCTGCCAAGAGATAGGACCACCTGAGTGTGTTTCCATCTTAAAACAAGGTTaGCTGCACAAGGACCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: LVEDSFCCQEIGPPECVSILKQG*LHKDLL Trigger: GAGAAGGTCCTTGTGCAGTCAACCTTGTTTTAAGAT...GGAAACACACTCAGGTGGTCCTATCTCTTGGCAGCAAAAGGAATCTTCTACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR TCA 90 bp | GTCAAGCAGGAGGTTCTTGCGTTGGAAATATTTATTCTTCAACGTTTACAGCATGCAGAGAAGAGCTCCTaGGACACACCGTCTGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: VKQEVLALEIFILQRLQHAEKSS*DTPSAV Trigger: TACAGCAGACGGTGTGTCTCAGGAGCTCTTCTCTGC...ATGCTGTAAACGTTGAAGAATAAATATTTCCAACGCAAGAACCTCCTGCTTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR GCA 90 bp | GTTAGCAATCTAACAGAACGGCAGCAAGGTTACAGTATTCTAAATGTCCAGATGCTACGTTGGGATGGCTaGATTGGCTCATGGCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: VSNLTERQQGYSILNVQMLRWDG*IGSWLE Trigger: TTCAAGCCATGAGCCAATGCAGCCATCCCAACGTAG...CATCTGGACATTTAGAATACTGTAACCTTGCTGCCGTTCTGTTAGATTGCTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR CCA 90 bp | TCGTTATATGAAAGTTTGCAAGGCACCTCCCTCTCCCAAGAGACGACTGGATTGTCATCCATACTCGTCTaGCATTTTTCCAAGTTGATC | + |
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Preference number: 4 (lower is better) Translates to: SLYESLQGTSLSQETTGLSSILV*HFSKLI Trigger: GATCAACTTGGAAAAATGCCAGACGAGTATGGATGA...CAATCCAGTCGTCTCTTGGGAGAGGGAGGTGCCTTGCAAACTTTCATATAACGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR CAA 72 bp | CCGGAGCCCACCTTCTTGAAGGTCTTGACTCCAAATTaGAAACTTCTAAGGTTTCCTGGGTTCATAATACAC | + |
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Preference number: 4 (lower is better) Translates to: PEPTFLKVLTPN*KLLRFPGFIIH Trigger: GTGTATTATGAACCCAGGAAACCTTAGAAGTTTCAAATTTGGAGTCAAGACCTTCAAGAAGGTGGGCTCCGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR TCA 90 bp | CCTGGGTTCATAATACACAGTCAAGCAGGAGGTTCTTGCGTTGGAAATATTTATTCCACATATCAGCCTTaGAGTCATAGCCTCTCACCT | + |
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Preference number: 4 (lower is better) Translates to: PGFIIHSQAGGSCVGNIYSTYQP*SHSLSP Trigger: AGGTGAGAGGCTATGACTTCAAGGCTGATATGTGGA...ATAAATATTTCCAACGCAAGAACCTCCTGCTTGACTGTGTATTATGAACCCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR GCA 90 bp | CTTGACTCCAAATTTGAAACTTCTAAGGTTTCCTGGGTTCATAATACACAGTCAATGGCTACGCGTTCTTaGCTGGGTTTGCATAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: LDSKFETSKVSWVHNTQSMATRS*LGLHRA Trigger: AGCCCTATGCAAACCCAGGCAAGAACGCGTAGCCAT...TGACTGTGTATTATGAACCCAGGAAACCTTAGAAGTTTCAAATTTGGAGTCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR CCA 90 bp | TTGATCGCACTTCATCGAAGCCAGCCTCTTCACAATCTTCTTATTTGTTGGGATGGTACTCTCTGTTCTTaGCTTTCTGGAAGAACTTGC | + |
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Preference number: 4 (lower is better) Translates to: LIALHRSQPLHNLLICWDGTLCS*LSGRTC Trigger: GCAAGTTCTTCCAGAAAGCCAAGAACAGAGAGTACC...ATCCCAACAAATAAGAAGATTGTGAAGAGGCTGGCTTCGATGAAGTGCGATCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR CAA 72 bp | AAAAACAACAAATCCTATCGCCTAAGGAGAGCCAAATaGGAGACGGGGGACGTAGTTAGCAATCTAACAGAA | + |
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Preference number: 4 (lower is better) Translates to: KNNKSYRLRRAK*ETGDVVSNLTE Trigger: TTCTGTTAGATTGCTAACTACGTCCCCCGTCTCCAATTTGGCTCTCCTTAGGCGATAGGATTTGTTGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR TCA 90 bp | TTGAGATCTGAGACTAGTCCAGAGTTAAGCAGCCTCAGGCACATTCGTTATATGGTGACAGTAACTTTCTaGAGGACTTGCCGTATTTTT | + |
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Preference number: 4 (lower is better) Translates to: LRSETSPELSSLRHIRYMVTVTF*RTCRIF Trigger: AAAAATACGGCAAGTCCTTCAGAAAGTTACTGTCAC...CATATAACGAATGTGCCTGAGGCTGCTTAACTCTGGACTAGTCTCAGATCTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR GCA 90 bp | GAGGTTCTTGCGTTGGAAATATTTATTCTTCAACGTTTACAGCATTTTTACCGTGTTCTTGCCTGGGTTTaGATAGGGCTGCCTGAACCA | + |
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Preference number: 4 (lower is better) Translates to: EVLALEIFILQRLQHFYRVLAWV*IGLPEP Trigger: TGGTTCAGGCAGCCCTATGCAAACCCAGGCAAGAAC...ACGGTAAAAATGCTGTAAACGTTGAAGAATAAATATTTCCAACGCAAGAACCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR CCA 90 bp | GTTAGCAATCTAACAGAACGGCAGCAAGGTTACAGTATTCTAAATGTCCAGATGCACCAGTTTCTAAAGTaGGCGGGTCATTTTGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: VSNLTERQQGYSILNVQMHQFLK*AGHFAK Trigger: CTTTGCAAAATGACCCGCCCACTTTAGAAACTGGTG...CATCTGGACATTTAGAATACTGTAACCTTGCTGCCGTTCTGTTAGATTGCTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR CCA 90 bp | TTTCCTGGGTTCATAATACACAGTCAAGCAGGAGGTTCTTGCGTTGGAAATATTAAAGTTCTGCTGCTGTaGGCCTTTTGGAAGGATCTT | + |
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Preference number: 4 (lower is better) Translates to: FPGFIIHSQAGGSCVGNIKVLLL*AFWKDL Trigger: AAGATCCTTCCAAAAGGCCCACAGCAGCAGAACTTT...AATATTTCCAACGCAAGAACCTCCTGCTTGACTGTGTATTATGAACCCAGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR TCA 90 bp | GAGGTTCTTGCGTTGGAAATATTTATTCTTCAACGTTTACAGCATTTTTACCGTGCCACAGCTCATCTTTaGCCACAAAGGAGGTGTAAT | + |
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Preference number: 4 (lower is better) Translates to: EVLALEIFILQRLQHFYRATAHL*PQRRCN Trigger: ATTACACCTCCTTTGTGGTCAAAGATGAGCTGTGGC...ACGGTAAAAATGCTGTAAACGTTGAAGAATAAATATTTCCAACGCAAGAACCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR TCA 90 bp | GTTAGCAATCTAACAGAACGGCAGCAAGGTTACAGTATTCTAAATGTCCAGATGATTCACCGAGATCTCTaGGTTCTCTTCTTTTACTCT | + |
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Preference number: 4 (lower is better) Translates to: VSNLTERQQGYSILNVQMIHRDL*VLFFYS Trigger: AGAGTAAAAGAAGAGAACTCAGAGATCTCGGTGAAT...CATCTGGACATTTAGAATACTGTAACCTTGCTGCCGTTCTGTTAGATTGCTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR CCA 90 bp | AGTCCAGAGTTAAGCAGCCTCAGGCACATTCGTTATATGAAAGTTTGCAAGGCAACGTTTTTAAAGCTTTaGGGTCATCTACAATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SPELSSLRHIRYMKVCKATFLKL*GHLQSS Trigger: AGAAGATTGTAGATGACCCCAAAGCTTTAAAAACGT...TGCCTTGCAAACTTTCATATAACGAATGTGCCTGAGGCTGCTTAACTCTGGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| 3UTR CAA 72 bp | TCCTGGGTTCATAATACACAGTCAAGCAGGAGGTTCTaGCGTTGGAAATATTTATTCTTCAACGTTTACAGC | + |
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Preference number: 4 (lower is better) Translates to: SWVHNTQSSRRF*RWKYLFFNVYS Trigger: GCTGTAAACGTTGAAGAATAAATATTTCCAACGCAAGAACCTCCTGCTTGACTGTGTATTATGAACCCAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS TCA 90 bp | CGCTTTATGGCTACGCGTTCTTGCCTGGGTTTGCATAGGGCTGCCTaGACCACCGCAGTTGCTCCGCTGCCGATAACCTCCTGGAGCTCG | + |
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Preference number: 5 (lower is better) Translates to: RFMATRSCLGLHRAA*TTAVAPLPITSWSS Trigger: CGAGCTCCAGGAGGTTATCGGCAGCGGAGCAACTGCGGTGGTTCAGGCAGCCCTATGCAAACCCAGGCAAGAACGCGTAGCCATAAAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS CCA 90 bp | CGACCCAGGAACTCGCCTTACCTTCTTGGCTCTTTGGGCTATGTCTaGGGTTCTTGTCAGCAGCTTCTCGATCAGGTACTCTCTGTTCTT | + |
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Preference number: 5 (lower is better) Translates to: RPRNSPYLLGSLGYV*GSCQQLLDQVLSVL Trigger: AAGAACAGAGAGTACCTGATCGAGAAGCTGCTGACAAGAACCCCAGACATAGCCCAAAGAGCCAAGAAGGTAAGGCGAGTTCCTGGGTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR CAA 90 bp | CCCTCTCCCAAGAGACGACTGGATTGTGGGCTGGATTTTAGGCAAACCAACCAATGGCATTTTTCCAAGTaGATCCGCTTTATGGCTACG | + |
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Preference number: 5 (lower is better) Translates to: PSPKRRLDCGLDFRQTNQWHFSK*IRFMAT Trigger: CGTAGCCATAAAGCGGATCAACTTGGAAAAATGCCA...TTGGTTGGTTTGCCTAAAATCCAGCCCACAATCCAGTCGTCTCTTGGGAGAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR CAA 90 bp | GGAGAAAAGGCTTCTGGTAGAAGATTCCTTTTGCTGCCAAGAGATAGGACCACCAAGGCGCTGCTCCGGTaGCTAATTCAATGGCAGTTA | + |
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Preference number: 5 (lower is better) Translates to: GEKASGRRFLLLPRDRTTKALLR*LIQWQL Trigger: TAACTGCCATTGAATTAGCAACCGGAGCAGCGCCTT...GGTGGTCCTATCTCTTGGCAGCAAAAGGAATCTTCTACCAGAAGCCTTTTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR CAA 90 bp | GGAGAAAAGGCTTCTGGTAGAAGATTCCTTTTGCTGCCAAGAGATAGGACCACCACTCGCCTTACCTTCTaGGCTCTTTGGGCTATGTCT | + |
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Preference number: 5 (lower is better) Translates to: GEKASGRRFLLLPRDRTTTRLTF*ALWAMS Trigger: AGACATAGCCCAAAGAGCCAAGAAGGTAAGGCGAGT...GGTGGTCCTATCTCTTGGCAGCAAAAGGAATCTTCTACCAGAAGCCTTTTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR CAA 90 bp | GAGGTTCTTGCGTTGGAAATATTTATTCTTCAACGTTTACAGCATTTTTACCGTCTATGTCTGGGGTTCTaGTCAGCAGCTTCTCGATCA | + |
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Preference number: 5 (lower is better) Translates to: EVLALEIFILQRLQHFYRLCLGF*SAASRS Trigger: TGATCGAGAAGCTGCTGACAAGAACCCCAGACATAG...ACGGTAAAAATGCTGTAAACGTTGAAGAATAAATATTTCCAACGCAAGAACCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR CAA 90 bp | TTGAGATCTGAGACTAGTCCAGAGTTAAGCAGCCTCAGGCACATTCGTTATATGAACGTTTTTAAAGCTTaGGGGTCATCTACAATCTTC | + |
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Preference number: 5 (lower is better) Translates to: LRSETSPELSSLRHIRYMNVFKA*GSSTIF Trigger: GAAGATTGTAGATGACCCCAAAGCTTTAAAAACGTT...CATATAACGAATGTGCCTGAGGCTGCTTAACTCTGGACTAGTCTCAGATCTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS-3UTR CAA 90 bp | GAGGTTCTTGCGTTGGAAATATTTATTCTTCAACGTTTACAGCATTTTTACCGTAGGTACTCTCTGTTCTaGGCTTTCTGGAAGAACTTG | + |
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Preference number: 5 (lower is better) Translates to: EVLALEIFILQRLQHFYRRYSLF*AFWKNL Trigger: CAAGTTCTTCCAGAAAGCCAAGAACAGAGAGTACCT...ACGGTAAAAATGCTGTAAACGTTGAAGAATAAATATTTCCAACGCAAGAACCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS TCA 72 bp | GCTACGCGTTCTTGCCTGGGTTTGCATAGGGCTGCCTaGACCACCGCAGTTGCTCCGCTGCCGATAACCTCC | + |
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Preference number: 6 (lower is better) Translates to: ATRSCLGLHRAA*TTAVAPLPITS Trigger: GGAGGTTATCGGCAGCGGAGCAACTGCGGTGGTTCAGGCAGCCCTATGCAAACCCAGGCAAGAACGCGTAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS CAA 72 bp | GCTCGACCCAGGAACTCGCCTTACCTTCTTGGCTCTTaGGGCTATGTCTGGGGTTCTTGTCAGCAGCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: ARPRNSPYLLGS*GYVWGSCQQLL Trigger: GAGAAGCTGCTGACAAGAACCCCAGACATAGCCCAAAGAGCCAAGAAGGTAAGGCGAGTTCCTGGGTCGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS CAA 72 bp | TTGGGCCTGAGAGTCGTGCACAGAGAGAGACTGTATTaGCTCAGGGATGCCACCAGCATTCACCGAGATCTC | + |
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Preference number: 6 (lower is better) Translates to: LGLRVVHRERLY*LRDATSIHRDL Trigger: GAGATCTCGGTGAATGCTGGTGGCATCCCTGAGCAAATACAGTCTCTCTCTGTGCACGACTCTCAGGCCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS CCA 72 bp | AACTCGCCTTACCTTCTTGGCTCTTTGGGCTATGTCTaGGGTTCTTGTCAGCAGCTTCTCGATCAGGTACTC | + |
|
Preference number: 6 (lower is better) Translates to: NSPYLLGSLGYV*GSCQQLLDQVL Trigger: GAGTACCTGATCGAGAAGCTGCTGACAAGAACCCCAGACATAGCCCAAAGAGCCAAGAAGGTAAGGCGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS CAA 90 bp | GAACTCGCCTTACCTTCTTGGCTCTTTGGGCTATGTCTGGGGTTCTaGTCAGCAGCTTCTCGATCAGGTACTCTCTGTTCTTGGCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ELALPSWLFGLCLGF*SAASRSGTLCSWLS Trigger: AGAAAGCCAAGAACAGAGAGTACCTGATCGAGAAGCTGCTGACAAGAACCCCAGACATAGCCCAAAGAGCCAAGAAGGTAAGGCGAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS TCA 72 bp | GTCACTACGTTGGGATGGCTGCATTGGCTCATGGCTTaGATTTCTTTCAGGAGTTCATCCATACTCGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VTTLGWLHWLMA*ISFRSSSILVW Trigger: CCAGACGAGTATGGATGAACTCCTGAAAGAAATTCAAGCCATGAGCCAATGCAGCCATCCCAACGTAGTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS CAA 72 bp | TTACCTTCTTGGCTCTTTGGGCTATGTCTGGGGTTCTaGTCAGCAGCTTCTCGATCAGGTACTCTCTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LPSWLFGLCLGF*SAASRSGTLCS Trigger: AGAACAGAGAGTACCTGATCGAGAAGCTGCTGACAAGAACCCCAGACATAGCCCAAAGAGCCAAGAAGGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS TCA 72 bp | AGTTCTGCTGCTGTGGGCCTTTTGGAAGGATCTTTCTaGAGACACAGTGACAGTAACTTTCTGAAGGACTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSAAVGLLEGSF*RHSDSNFLKDL Trigger: CAAGTCCTTCAGAAAGTTACTGTCACTGTGTCTTCAGAAAGATCCTTCCAAAAGGCCCACAGCAGCAGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS GCA 72 bp | TCCTCTACACCAGTTTCTAAAGTGGGCGGGTCATTTTaGAAAGTCAGCATTAGCACTTTCATTGGAGGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: SSTPVSKVGGSF*KVSISTFIGGY Trigger: ATACCCTCCAATGAAAGTGCTAATGCTGACTTTGCAAAATGACCCGCCCACTTTAGAAACTGGTGTAGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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| CDS CAA 72 bp | ACACCATTTTTATGTTCTCCTCGATTAACGATGTATTaGATGATATCCAACATGGAACCTCCACTTAGTAAT | + |
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Preference number: 6 (lower is better) Translates to: TPFLCSPRLTMY*MISNMEPPLSN Trigger: ATTACTAAGTGGAGGTTCCATGTTGGATATCATCAAATACATCGTTAATCGAGGAGAACATAAAAATGGTGT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102715.4 |
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