Pregenerated sensors for STK38L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001630Ensembl transcript IDs: ENSMUST00000001675.14, ENSMUST00000111644.2, ENSMUST00000203318.2
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCACTGATTCTAGACCCACGGGCTCTGCAGTGAAGCAGGGACACTaGGAGCAACCTCAGGCTGTCATGGTGCCGTCAGTGCAATGCAGT | + |
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Preference number: 1 (lower is better) Translates to: FTDSRPTGSAVKQGH*EQPQAVMVPSVQCS Trigger: ACTGCATTGCACTGACGGCACCATGACAGCCTGAGGTTGCTCTCAGTGTCCCTGCTTCACTGCAGAGCCCGTGGGTCTAGAATCAGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| 3UTR CCA 90 bp | GCTCCACTCCCTGCTGACAGCCACTGTTCAGGATCTTTGGTTCATTaGAAAACAATGGCACTAGTGCAATCAAGGGAACAAAGGGTCACC | + |
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Preference number: 1 (lower is better) Translates to: APLPADSHCSGSLVH*KTMALVQSREQRVT Trigger: GGTGACCCTTTGTTCCCTTGATTGCACTAGTGCCATTGTTTTCCAATGAACCAAAGATCCTGAACAGTGGCTGTCAGCAGGGAGTGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR CCA 90 bp | TTTCACCACACAGCTGATCGGTGGTTAAGTGGTCACAACTTACTTTaGACAGCCCAGGTTTCATACATCTCCAGACTTAGCTGTGAACAA | + |
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Preference number: 1 (lower is better) Translates to: FHHTADRWLSGHNLL*TAQVSYISRLSCEQ Trigger: TTGTTCACAGCTAAGTCTGGAGATGTATGAAACCTGGGCTGTCCAAAGTAAGTTGTGACCACTTAACCACCGATCAGCTGTGTGGTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR CCA 90 bp | GTCAGGGAGGCTTATCTACCATTTTCAGTGCTTTCTCCAAATACTTaGCATAGGATTGATCAGGCTACAGCTGAGCCAGTAGATAACAAG | + |
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Preference number: 1 (lower is better) Translates to: VREAYLPFSVLSPNT*HRIDQATAEPVDNK Trigger: CTTGTTATCTACTGGCTCAGCTGTAGCCTGATCAATCCTATGCCAAGTATTTGGAGAAAGCACTGAAAATGGTAGATAAGCCTCCCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR CCA 90 bp | ATCTTAAGCCTTAGCAGCCAAAGAACGCATTTAATATTCCATAGCTaGCACTTTCACCACACAGCTGATCGGTGGTTAAGTGGTCACAAC | + |
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Preference number: 1 (lower is better) Translates to: ILSLSSQRTHLIFHS*HFHHTADRWLSGHN Trigger: GTTGTGACCACTTAACCACCGATCAGCTGTGTGGTGAAAGTGCCAGCTATGGAATATTAAATGCGTTCTTTGGCTGCTAAGGCTTAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR GCA 90 bp | ATATTAAGGCAGCTAAAGTCAGGGAGGCTTATCTACCATTTTCAGTaGTTTCTCCAAATACTTGGCATAGGATTGATCAGGCTACAGCTG | + |
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Preference number: 1 (lower is better) Translates to: ILRQLKSGRLIYHFQ*FLQILGIGLIRLQL Trigger: CAGCTGTAGCCTGATCAATCCTATGCCAAGTATTTGGAGAAAGCACTGAAAATGGTAGATAAGCCTCCCTGACTTTAGCTGCCTTAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR GCA 90 bp | GAAAAAGTCAGTATCAGAGGATCTCTGCAAATTATTTGCACAATTTaGACCATGCCTCGTATTTTTGCTTCAACAGGCAGACAGTCTTTA | + |
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Preference number: 1 (lower is better) Translates to: EKVSIRGSLQIICTI*TMPRIFASTGRQSL Trigger: TAAAGACTGTCTGCCTGTTGAAGCAAAAATACGAGGCATGGTGCAAATTGTGCAAATAATTTGCAGAGATCCTCTGATACTGACTTTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR TCA 90 bp | AATAAAAACATACTAGGTTCTACAAGCAGCTTTCATGGTCATTTCTaGAACTCAGCTCACCATCCTCAAACTAAAACAATGCTACAGCAT | + |
|
Preference number: 1 (lower is better) Translates to: NKNILGSTSSFHGHF*NSAHHPQTKTMLQH Trigger: ATGCTGTAGCATTGTTTTAGTTTGAGGATGGTGAGCTGAGTTTCAGAAATGACCATGAAAGCTGCTTGTAGAACCTAGTATGTTTTTATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGGACAAGTACCACCTCTGCAGAAAGCCACAGTGAGCCACACTCTGCTCTCCGAGCCAGCCTGCGGATaGAGCTACCTGAGTTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: AGQVPPLQKATVSHTLLSEPACG*SYLSSP Trigger: AGGAGAACTCAGGTAGCTGCATCCGCAGGCTGGCTC...GGAGAGCAGAGTGTGGCTCACTGTGGCTTTCTGCAGAGGTGGTACTTGTCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR-3UTR TCA 90 bp | GTTGAAGTCAGCGTCCTTAAGTTCCTTGGAGCCGGTACAGAAACTGTCTTCATGCAGAGCTCCTGGTGCTaGTGCCGAGCCAGCCTGCGG | + |
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Preference number: 2 (lower is better) Translates to: VEVSVLKFLGAGTETVFMQSSWC*CRASLR Trigger: CCGCAGGCTGGCTCGGCATCAGCACCAGGAGCTCTG...CATGAAGACAGTTTCTGTACCGGCTCCAAGGAACTTAAGGACGCTGACTTCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGGACAAGTACCACCTCTGCAGAAAGCCACAGTGAGCCACACTCTGCTCTCCATCACAGGGTCTGCGTaGGAGCCTGACAGGAAATTC | + |
|
Preference number: 2 (lower is better) Translates to: AGQVPPLQKATVSHTLLSITGSA*EPDRKF Trigger: GAATTTCCTGTCAGGCTCTCACGCAGACCCTGTGAT...GGAGAGCAGAGTGTGGCTCACTGTGGCTTTCTGCAGAGGTGGTACTTGTCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR-3UTR GCA 90 bp | GCTGGACAAGTACCACCTCTGCAGAAAGCCACAGTGAGCCACACTCTGCTCTCCTCATGGTGCCGTCAGTaGAATGCAGTTCTGGCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: AGQVPPLQKATVSHTLLSSWCRQ*NAVLAG Trigger: TCCAGCCAGAACTGCATTGCACTGACGGCACCATGA...GGAGAGCAGAGTGTGGCTCACTGTGGCTTTCTGCAGAGGTGGTACTTGTCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR-3UTR GCA 90 bp | GCGTCCTTAAGTTCCTTGGAGCCGGTACAGAAACTGTCTTCATGTAGAGCCCACGAGCCAGCCTGCGGATaGAGCTACCTGAGTTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: ASLSSLEPVQKLSSCRAHEPACG*SYLSSP Trigger: AGGAGAACTCAGGTAGCTGCATCCGCAGGCTGGCTC...GTGGGCTCTACATGAAGACAGTTTCTGTACCGGCTCCAAGGAACTTAAGGACGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| 3UTR-3UTR TCA 90 bp | GTTGAAGTCAGCGTCCTTAAGTTCCTTGGAGCCGGTACAGAAACTGTCTTCATGGCGGATGCAGCTACCTaGGTTCTCCTGGCTATGGGC | + |
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Preference number: 2 (lower is better) Translates to: VEVSVLKFLGAGTETVFMADAAT*VLLAMG Trigger: GCCCATAGCCAGGAGAACTCAGGTAGCTGCATCCGC...CATGAAGACAGTTTCTGTACCGGCTCCAAGGAACTTAAGGACGCTGACTTCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGCCCAGGTTTCATACATCTCCAGACTTAGCTGTGAACAACTGCTTCAACACGCGGATGCAGCTACCTaGGTTCTCCTGGCTATGGGC | + |
|
Preference number: 2 (lower is better) Translates to: TAQVSYISRLSCEQLLQHADAAT*VLLAMG Trigger: GCCCATAGCCAGGAGAACTCAGGTAGCTGCATCCGC...GTGTTGAAGCAGTTGTTCACAGCTAAGTCTGGAGATGTATGAAACCTGGGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR-3UTR TCA 90 bp | CTAATGTCGTTGAAGTCAGCGTCCTTAAGTTCCTTGGAGCCGGTACAGAAACTGGTGAAGCAGGGACACTaGGAGCAACCTCAGGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: LMSLKSASLSSLEPVQKLVKQGH*EQPQAV Trigger: GACAGCCTGAGGTTGCTCTCAGTGTCCCTGCTTCAC...CAGTTTCTGTACCGGCTCCAAGGAACTTAAGGACGCTGACTTCAACGACATTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| 3UTR-3UTR TCA 90 bp | CTTAAAGGACTCACCAAAATAAATCAGGAGCTGATGGCCTTGATGAAAGAGGGGCCACGGGCTCTGCAGTaGAGCAGGGACACTGAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: LKGLTKINQELMALMKEGPRALQ*SRDTES Trigger: GCTCTCAGTGTCCCTGCTTCACTGCAGAGCCCGTGG...CCCCTCTTTCATCAAGGCCATCAGCTCCTGATTTATTTTGGTGAGTCCTTTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR-3UTR TCA 90 bp | TCATGTAGAGCCCACAATGTCCAAACCAACAGGGCAAATGTTCTACTAACAGCACCACGGGCTCTGCAGTaGAGCAGGGACACTGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: SCRAHNVQTNRANVLLTAPRALQ*SRDTES Trigger: GCTCTCAGTGTCCCTGCTTCACTGCAGAGCCCGTGG...TGCTGTTAGTAGAACATTTGCCCTGTTGGTTTGGACATTGTGGGCTCTACATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTGGGCAGCCATGTTAATGCTGCAAAGCAAACTTCCCAAAATGCCTCTCCACAGCTCCACTCCCTGCTaGCAGCCACTGTTCAGGATC | + |
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Preference number: 2 (lower is better) Translates to: KWAAMLMLQSKLPKMPLHSSTPC*QPLFRI Trigger: GATCCTGAACAGTGGCTGTCAGCAGGGAGTGGAGCT...GTGGAGAGGCATTTTGGGAAGTTTGCTTTGCAGCATTAACATGGCTGCCCACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR-3UTR CCA 90 bp | AAGTGGGCAGCCATGTTAATGCTGCAAAGCAAACTTCCCAAAATGCCTCTCCACAGTCGTTCCTCTGGCTaGAGAGCAGCACTGTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: KWAAMLMLQSKLPKMPLHSRSSG*RAALSQ Trigger: CTGGGACAGTGCTGCTCTCCAGCCAGAGGAACGACT...GTGGAGAGGCATTTTGGGAAGTTTGCTTTGCAGCATTAACATGGCTGCCCACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR-3UTR TCA 90 bp | TTGAAGTCAGCGTCCTTAAGTTCCTTGGAGCCGGTACAGAAACTGTCTTCATGTGTGAAGCAGGGACACTaGGAGCAACCTCAGGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: LKSASLSSLEPVQKLSSCVKQGH*EQPQAV Trigger: GACAGCCTGAGGTTGCTCTCAGTGTCCCTGCTTCAC...ACATGAAGACAGTTTCTGTACCGGCTCCAAGGAACTTAAGGACGCTGACTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| 3UTR-3UTR CCA 90 bp | CAATGTCCAAACCAACAGGGCAAATGTTCTACTAACAGCAGCTACAGAAGATGGAGTCGTTCCTCTGGCTaGAGAGCAGCACTGTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: QCPNQQGKCSTNSSYRRWSRSSG*RAALSQ Trigger: CTGGGACAGTGCTGCTCTCCAGCCAGAGGAACGACT...CCATCTTCTGTAGCTGCTGTTAGTAGAACATTTGCCCTGTTGGTTTGGACATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| 3UTR CAA 90 bp | AAAGCCGGAGCTCCACTCCCTGCTGACAGCCACTGTTCAGGATCTTaGGTTCATTGGAAAACAATGGCACTAGTGCAATCAAGGGAACAA | + |
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Preference number: 2 (lower is better) Translates to: KAGAPLPADSHCSGS*VHWKTMALVQSREQ Trigger: TTGTTCCCTTGATTGCACTAGTGCCATTGTTTTCCAATGAACCAAAGATCCTGAACAGTGGCTGTCAGCAGGGAGTGGAGCTCCGGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR-3UTR CCA 90 bp | GGAAATTCTAATGTCGTTGAAGTCAGCGTCCTTAAGTTCCTTGGAGCCGGTACACTACCTGAGTTCTCCTaGCTATGGGCGACTGTGATC | + |
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Preference number: 2 (lower is better) Translates to: GNSNVVEVSVLKFLGAGTLPEFS*LWATVI Trigger: GATCACAGTCGCCCATAGCCAGGAGAACTCAGGTAG...TGTACCGGCTCCAAGGAACTTAAGGACGCTGACTTCAACGACATTAGAATTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| 3UTR-3UTR CCA 90 bp | CTTAAAGGACTCACCAAAATAAATCAGGAGCTGATGGCCTTGATGAAAGAGGGGCTACCTGAGTTCTCCTaGCTATGGGCGACTGTGATC | + |
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Preference number: 2 (lower is better) Translates to: LKGLTKINQELMALMKEGLPEFS*LWATVI Trigger: GATCACAGTCGCCCATAGCCAGGAGAACTCAGGTAG...CCCCTCTTTCATCAAGGCCATCAGCTCCTGATTTATTTTGGTGAGTCCTTTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR-3UTR GCA 90 bp | AGCTCATATACCCTGCAGATATTAAGGCAGCTAAAGTCAGGGAGGCTTATCTACAGCGAAGGTGAGAAATaGCCTCACCCTAACAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: SSYTLQILRQLKSGRLIYSEGEK*PHPNRS Trigger: GCTTCTGTTAGGGTGAGGGCATTTCTCACCTTCGCT...GTAGATAAGCCTCCCTGACTTTAGCTGCCTTAATATCTGCAGGGTATATGAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR-3UTR CCA 90 bp | ACAGCCCAGGTTTCATACATCTCCAGACTTAGCTGTGAACAACTGCTTCAACACGGATCTTTGGTTCATTaGAAAACAATGGCACTAGTG | + |
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Preference number: 2 (lower is better) Translates to: TAQVSYISRLSCEQLLQHGSLVH*KTMALV Trigger: CACTAGTGCCATTGTTTTCCAATGAACCAAAGATCC...GTGTTGAAGCAGTTGTTCACAGCTAAGTCTGGAGATGTATGAAACCTGGGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR-3UTR CCA 90 bp | CTTAAAGGACTCACCAAAATAAATCAGGAGCTGATGGCCTTGATGAAAGAGGGGTACAAGCAGCTTTCATaGTCATTTCTGAAACTCAGC | + |
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Preference number: 2 (lower is better) Translates to: LKGLTKINQELMALMKEGYKQLS*SFLKLS Trigger: GCTGAGTTTCAGAAATGACCATGAAAGCTGCTTGTA...CCCCTCTTTCATCAAGGCCATCAGCTCCTGATTTATTTTGGTGAGTCCTTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR CAA 90 bp | GGAAAAAGTCAGTATCAGAGGATCTCTGCAAATTATTTGCACAATTaGCACCATGCCTCGTATTTTTGCTTCAACAGGCAGACAGTCTTT | + |
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Preference number: 2 (lower is better) Translates to: GKSQYQRISANYLHN*HHASYFCFNRQTVF Trigger: AAAGACTGTCTGCCTGTTGAAGCAAAAATACGAGGCATGGTGCAAATTGTGCAAATAATTTGCAGAGATCCTCTGATACTGACTTTTTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR-3UTR GCA 90 bp | CCCTCAAGTAACTTACTTGTAGACTGCCAAAAGATAGGTAGGTGGCTAGCTATCTTAGCTGTGAACAACTaGTTCAACACAAAGGTTTTA | + |
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Preference number: 2 (lower is better) Translates to: PSSNLLVDCQKIGRWLAILAVNN*FNTKVL Trigger: TAAAACCTTTGTGTTGAAGCAGTTGTTCACAGCTAA...GATAGCTAGCCACCTACCTATCTTTTGGCAGTCTACAAGTAAGTTACTTGAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR-3UTR TCA 90 bp | AATGGGAAAAAGTCAGTATCAGAGGATCTCTGCAAATTATTTGCACAATTTGCAACATTAGCCATTCCCTaGGAAGTTACTACAACTACA | + |
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Preference number: 2 (lower is better) Translates to: NGKKSVSEDLCKLFAQFATLAIP*EVTTTT Trigger: TGTAGTTGTAGTAACTTCTCAGGGAATGGCTAATGT...TGCAAATTGTGCAAATAATTTGCAGAGATCCTCTGATACTGACTTTTTCCCATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR TCA 72 bp | TCTAGACCCACGGGCTCTGCAGTGAAGCAGGGACACTaGGAGCAACCTCAGGCTGTCATGGTGCCGTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: SRPTGSAVKQGH*EQPQAVMVPSV Trigger: CACTGACGGCACCATGACAGCCTGAGGTTGCTCTCAGTGTCCCTGCTTCACTGCAGAGCCCGTGGGTCTAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| 3UTR TCA 72 bp | GGCTTTTCACTGATTCTAGACCCACGGGCTCTGCAGTaGAGCAGGGACACTGAGAGCAACCTCAGGCTGTCA | + |
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Preference number: 3 (lower is better) Translates to: GFSLILDPRALQ*SRDTESNLRLS Trigger: TGACAGCCTGAGGTTGCTCTCAGTGTCCCTGCTTCACTGCAGAGCCCGTGGGTCTAGAATCAGTGAAAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| 3UTR CCA 72 bp | GCTGTCATGGTGCCGTCAGTGCAATGCAGTTCTGGCTaGATTAGTGTTGCAATCGGAAGCGCAGCACATGGG | + |
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Preference number: 3 (lower is better) Translates to: AVMVPSVQCSSG*ISVAIGSAAHG Trigger: CCCATGTGCTGCGCTTCCGATTGCAACACTAATCCAGCCAGAACTGCATTGCACTGACGGCACCATGACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| 3UTR GCA 72 bp | ACTGAGAGCAACCTCAGGCTGTCATGGTGCCGTCAGTaGAATGCAGTTCTGGCTGGATTAGTGTTGCAATCG | + |
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Preference number: 3 (lower is better) Translates to: TESNLRLSWCRQ*NAVLAGLVLQS Trigger: CGATTGCAACACTAATCCAGCCAGAACTGCATTGCACTGACGGCACCATGACAGCCTGAGGTTGCTCTCAGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| 3UTR CCA 72 bp | GCACTAGTGCAATCAAGGGAACAAAGGGTCACCAGCTaGACAAGTACCACCTCTGCAGAAAGCCACAGTGAG | + |
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Preference number: 3 (lower is better) Translates to: ALVQSREQRVTS*TSTTSAESHSE Trigger: CTCACTGTGGCTTTCTGCAGAGGTGGTACTTGTCCAGCTGGTGACCCTTTGTTCCCTTGATTGCACTAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR TCA 72 bp | GCTCATCTTCCCTATCACAGGGTCTGCGTGAGAGCCTaGCAGGAAATTCTAATGTCGTTGAAGTCAGCGTCC | + |
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Preference number: 3 (lower is better) Translates to: AHLPYHRVCVRA*QEILMSLKSAS Trigger: GGACGCTGACTTCAACGACATTAGAATTTCCTGTCAGGCTCTCACGCAGACCCTGTGATAGGGAAGATGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| 3UTR GCA 72 bp | GCCTTGATGAAAGAGGGGTCACAAGGCATTGCTCAGTaGCCTCAGGAGAAGCATTCCTCCCATAAAGTCTCA | + |
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Preference number: 3 (lower is better) Translates to: ALMKEGSQGIAQ*PQEKHSSHKVS Trigger: TGAGACTTTATGGGAGGAATGCTTCTCCTGAGGGCACTGAGCAATGCCTTGTGACCCCTCTTTCATCAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR TCA 72 bp | TTTGTAAACGTGGCTTTATTCTCGTTGTGCCGTGAATaGAGAGGCCCTCAATGCCCCTGCCCAACAGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: FVNVALFSLCRE*RGPQCPCPTVF Trigger: GAAGACTGTTGGGCAGGGGCATTGAGGGCCTCTTCATTCACGGCACAACGAGAATAAAGCCACGTTTACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR CCA 72 bp | CAGGGCAAATGTTCTACTAACAGCAGCTACAGAAGATaGCTTTTCACTGATTCTAGACCCACGGGCTCTGCA | + |
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Preference number: 3 (lower is better) Translates to: QGKCSTNSSYRR*LFTDSRPTGSA Trigger: TGCAGAGCCCGTGGGTCTAGAATCAGTGAAAAGCCATCTTCTGTAGCTGCTGTTAGTAGAACATTTGCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| 3UTR TCA 72 bp | CAACAGTCTTCGAAACGCTGGATGGGCTCAGAAGCCTaGTGGTTCTGGACAACTGCTGGATTATATTGCTTA | + |
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Preference number: 3 (lower is better) Translates to: QQSSKRWMGSEA*WFWTTAGLYCL Trigger: TAAGCAATATAATCCAGCAGTTGTCCAGAACCATCAGGCTTCTGAGCCCATCCAGCGTTTCGAAGACTGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR GCA 72 bp | AAACTTCCCAAAATGCCTCTCCACCACCAGGAAACCTaGCTCTCACAGCTTTTACAACCACAACAGAGAGAT | + |
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Preference number: 3 (lower is better) Translates to: KLPKMPLHHQET*LSQLLQPQQRD Trigger: ATCTCTCTGTTGTGGTTGTAAAAGCTGTGAGAGGCAGGTTTCCTGGTGGTGGAGAGGCATTTTGGGAAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR CCA 72 bp | ACAGCTGATCGGTGGTTAAGTGGTCACAACTTACTTTaGACAGCCCAGGTTTCATACATCTCCAGACTTAGC | + |
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Preference number: 3 (lower is better) Translates to: TADRWLSGHNLL*TAQVSYISRLS Trigger: GCTAAGTCTGGAGATGTATGAAACCTGGGCTGTCCAAAGTAAGTTGTGACCACTTAACCACCGATCAGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR-3UTR CAA 90 bp | CCCTCAAGTAACTTACTTGTAGACTGCCAAAAGATAGGTAGGTGGCTAGCTATCCCTGAGCTAGAGAATTaGGCAAGGTCTCCTATCCAA | + |
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Preference number: 3 (lower is better) Translates to: PSSNLLVDCQKIGRWLAIPELEN*ARSPIQ Trigger: TTGGATAGGAGACCTTGCCAAATTCTCTAGCTCAGG...GATAGCTAGCCACCTACCTATCTTTTGGCAGTCTACAAGTAAGTTACTTGAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR CCA 72 bp | CCTGCTGACAGCCACTGTTCAGGATCTTTGGTTCATTaGAAAACAATGGCACTAGTGCAATCAAGGGAACAA | + |
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Preference number: 3 (lower is better) Translates to: PADSHCSGSLVH*KTMALVQSREQ Trigger: TTGTTCCCTTGATTGCACTAGTGCCATTGTTTTCCAATGAACCAAAGATCCTGAACAGTGGCTGTCAGCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR-3UTR CAA 90 bp | AAGTGGGCAGCCATGTTAATGCTGCAAAGCAAACTTCCCAAAATGCCTCTCCACAGGATCTTTGGTTCATaGGAAAACAATGGCACTAGT | + |
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Preference number: 3 (lower is better) Translates to: KWAAMLMLQSKLPKMPLHRIFGS*ENNGTS Trigger: ACTAGTGCCATTGTTTTCCAATGAACCAAAGATCCT...GTGGAGAGGCATTTTGGGAAGTTTGCTTTGCAGCATTAACATGGCTGCCCACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| 3UTR-3UTR CAA 90 bp | GTGTATAATGGGAAAAAGTCAGTATCAGAGGATCTCTGCAAATTATTTGCACAAAGGGGTCACAAGGCATaGCTCAGTGCCCTCAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: VYNGKKSVSEDLCKLFAQRGHKA*LSALRR Trigger: TCTCCTGAGGGCACTGAGCAATGCCTTGTGACCCCT...TTGTGCAAATAATTTGCAGAGATCCTCTGATACTGACTTTTTCCCATTATACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
||
| 3UTR TCA 72 bp | TACACTAGCTTAGGGAACGCTTCCACAAGAAATTCCTaGAAAGTGGGCAGCCATGTTAATGCTGCAAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: YTSLGNASTRNS*KVGSHVNAAKQ Trigger: TTGCTTTGCAGCATTAACATGGCTGCCCACTTTTCAGGAATTTCTTGTGGAAGCGTTCCCTAAGCTAGTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
||
| 3UTR CCA 72 bp | CTTAGCAGCCAAAGAACGCATTTAATATTCCATAGCTaGCACTTTCACCACACAGCTGATCGGTGGTTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: LSSQRTHLIFHS*HFHHTADRWLS Trigger: ACTTAACCACCGATCAGCTGTGTGGTGAAAGTGCCAGCTATGGAATATTAAATGCGTTCTTTGGCTGCTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
||
| 3UTR-3UTR CAA 90 bp | AAGTGGGCAGCCATGTTAATGCTGCAAAGCAAACTTCCCAAAATGCCTCTCCACCATGGAAACATAAGTTaGGTAATTCTCCTGTACACT | + |
|
Preference number: 3 (lower is better) Translates to: KWAAMLMLQSKLPKMPLHHGNIS*VILLYT Trigger: AGTGTACAGGAGAATTACCAAACTTATGTTTCCATG...GTGGAGAGGCATTTTGGGAAGTTTGCTTTGCAGCATTAACATGGCTGCCCACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
||
| 3UTR TCA 72 bp | AACAATTCAAAGAGAGGATGTGCCAGGACCCTTTTCTaGCCCTCAAGTAACTTACTTGTAGACTGCCAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: NNSKRGCARTLF*PSSNLLVDCQK Trigger: CTTTTGGCAGTCTACAAGTAAGTTACTTGAGGGTCAGAAAAGGGTCCTGGCACATCCTCTCTTTGAATTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
||
| 3UTR GCA 72 bp | CAGCTAAAGTCAGGGAGGCTTATCTACCATTTTCAGTaGTTTCTCCAAATACTTGGCATAGGATTGATCAGG | + |
|
Preference number: 3 (lower is better) Translates to: QLKSGRLIYHFQ*FLQILGIGLIR Trigger: CCTGATCAATCCTATGCCAAGTATTTGGAGAAAGCACTGAAAATGGTAGATAAGCCTCCCTGACTTTAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
||
| 3UTR CCA 72 bp | GCTTATCTACCATTTTCAGTGCTTTCTCCAAATACTTaGCATAGGATTGATCAGGCTACAGCTGAGCCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: AYLPFSVLSPNT*HRIDQATAEPV Trigger: TACTGGCTCAGCTGTAGCCTGATCAATCCTATGCCAAGTATTTGGAGAAAGCACTGAAAATGGTAGATAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
||
| 3UTR GCA 72 bp | CAGCTTTTACAACCACAACAGAGAGATCAGACAAAGTaGTCTGTCCCTACATCATGGAAACATAAGTTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: QLLQPQQRDQTK*SVPTSWKHKFG Trigger: ACCAAACTTATGTTTCCATGATGTAGGGACAGAGCACTTTGTCTGATCTCTCTGTTGTGGTTGTAAAAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
||
| 3UTR TCA 72 bp | ATACTAGGTTCTACAAGCAGCTTTCATGGTCATTTCTaGAACTCAGCTCACCATCCTCAAACTAAAACAATG | + |
|
Preference number: 3 (lower is better) Translates to: ILGSTSSFHGHF*NSAHHPQTKTM Trigger: CATTGTTTTAGTTTGAGGATGGTGAGCTGAGTTTCAGAAATGACCATGAAAGCTGCTTGTAGAACCTAGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
||
| 3UTR GCA 72 bp | GTGTATAATGGGAAAAAGTCAGTATCAGAGGATCTCTaGAAATTATTTGCACAATTTGCACCATGCCTCGTA | + |
|
Preference number: 3 (lower is better) Translates to: VYNGKKSVSEDL*KLFAQFAPCLV Trigger: TACGAGGCATGGTGCAAATTGTGCAAATAATTTGCAGAGATCCTCTGATACTGACTTTTTCCCATTATACAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
||
| 3UTR GCA 72 bp | GAAAAAGTCAGTATCAGAGGATCTCTGCAAATTATTTaGACAATTTGCACCATGCCTCGTATTTTTGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: EKVSIRGSLQII*TICTMPRIFAS Trigger: TGAAGCAAAAATACGAGGCATGGTGCAAATTGTGCAAATAATTTGCAGAGATCCTCTGATACTGACTTTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
||
| 3UTR GCA 72 bp | AGGTTTCATACATCTCCAGACTTAGCTGTGAACAACTaGTTCAACACAAAGGTTTTAATGAAAAAGTACAAG | + |
|
Preference number: 3 (lower is better) Translates to: RFHTSPDLAVNN*FNTKVLMKKYK Trigger: CTTGTACTTTTTCATTAAAACCTTTGTGTTGAAGCAGTTGTTCACAGCTAAGTCTGGAGATGTATGAAACCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
||
| CDS-3UTR TCA 90 bp | GCTCCTGGTGCTGATGCCGAGCCAGCCTGCGGATGCAGCTACCTGAGTTCTCCTCTTTCTGCTCGGATATaGGCCACCTGCTCTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: APGADAEPACGCSYLSSPLSARI*ATCSFS Trigger: TGAGAAAGAGCAGGTGGCTCATATCCGAGCAGAAAG...AGGAGAACTCAGGTAGCTGCATCCGCAGGCTGGCTCGGCATCAGCACCAGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
||
| CDS-3UTR GCA 90 bp | GCTCCTGGTGCTGATGCCGAGCCAGCCTGCGGATGCAGCTACCTGAGTTCTCCTAGGAAAGGTAGTTGTTaGCCCTGCCGTCATTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: APGADAEPACGCSYLSSPRKGSC*PCRHCH Trigger: ATGGCAATGACGGCAGGGGCAACAACTACCTTTCCT...AGGAGAACTCAGGTAGCTGCATCCGCAGGCTGGCTCGGCATCAGCACCAGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
||
| CDS-3UTR GCA 90 bp | GCCAGCCTGCGGATGCAGCTACCTGAGTTCTCCTGGCTATGGGCGACTGTGATCCACTTCCGGAGGAAATaGCAGAGTCTCCTTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASLRMQLPEFSWLWATVIHFRRK*QSLLPA Trigger: AGCTGGAAGGAGACTCTGGCATTTCCTCCGGAAGTG...GATCACAGTCGCCCATAGCCAGGAGAACTCAGGTAGCTGCATCCGCAGGCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
||
| CDS-3UTR GCA 90 bp | GCCAGCCTGCGGATGCAGCTACCTGAGTTCTCCTGGCTATGGGCGACTGTGATCGGTCTTTCCCTTATGTaGCCCCAGTCTACACCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASLRMQLPEFSWLWATVIGLSLM*PQSTPS Trigger: TGAGGGTGTAGACTGGGGGCACATAAGGGAAAGACC...GATCACAGTCGCCCATAGCCAGGAGAACTCAGGTAGCTGCATCCGCAGGCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
||
| CDS-3UTR GCA 90 bp | GCCAGCCTGCGGATGCAGCTACCTGAGTTCTCCTGGCTATGGGCGACTGTGATCGCCCAGCTGGTGAATTaGATCTATCGCCAAGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASLRMQLPEFSWLWATVIAQLVN*IYRQDS Trigger: ACTGTCTTGGCGATAGATGCAATTCACCAGCTGGGC...GATCACAGTCGCCCATAGCCAGGAGAACTCAGGTAGCTGCATCCGCAGGCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGCCTGCGGATGCAGCTACCTGAGTTCTCCTGGCTATGGGCGACTGTGATCTCCTCAGGATCTTCATaGCATAGATGTGCCCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ASLRMQLPEFSWLWATVISSGSS*HRCAPC Trigger: ACACGGGGCACATCTATGCCATGAAGATCCTGAGGA...GATCACAGTCGCCCATAGCCAGGAGAACTCAGGTAGCTGCATCCGCAGGCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
||
| CDS-3UTR TCA 90 bp | GCTCCTGGTGCTGATGCCGAGCCAGCCTGCGGATGCAGCTACCTGAGTTCTCCTTGTAGCCAGTCTGCATaGATACTTCTGGAGCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: APGADAEPACGCSYLSSPCSQSA*ILLEQC Trigger: ACATTGCTCCAGAAGTATTCATGCAGACTGGCTACA...AGGAGAACTCAGGTAGCTGCATCCGCAGGCTGGCTCGGCATCAGCACCAGGAGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
||
| CDS-3UTR CCA 90 bp | GCTCCTGGTGCTGATGCCGAGCCAGCCTGCGGATGCAGCTACCTGAGTTCTCCTACTCTTTCCCGGGTATaGTTGCTCATAGGAAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: APGADAEPACGCSYLSSPTLSRV*LLIGKV Trigger: TACCTTTCCTATGAGCAACCATACCCGGGAAAGAGT...AGGAGAACTCAGGTAGCTGCATCCGCAGGCTGGCTCGGCATCAGCACCAGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
||
| CDS-3UTR TCA 90 bp | GGGAACAAAGGGTCACCAGCTGGACAAGTACCACCTCTGCAGAAAGCCACAGTGCGCCAAGACAGTCTCTaGGATGTAGAACTGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GNKGSPAGQVPPLQKATVRQDSL*DVELCL Trigger: GAGACACAGTTCTACATCTCAGAGACTGTCTTGGCG...CACTGTGGCTTTCTGCAGAGGTGGTACTTGTCCAGCTGGTGACCCTTTGTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
||
| CDS-3UTR GCA 90 bp | CATAGCCATAGCAGCCTCAGATTCCCAAGCTGTAGTCGTTCCTCTGGCTGGAGAGGTCTTTCCCTTATGTaGCCCCAGTCTACACCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HSHSSLRFPSCSRSSGWRGLSLM*PQSTPS Trigger: TGAGGGTGTAGACTGGGGGCACATAAGGGAAAGACC...TCTCCAGCCAGAGGAACGACTACAGCTTGGGAATCTGAGGCTGCTATGGCTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
||
| CDS-3UTR GCA 90 bp | GCTCCTGGTGCTGATGCCGAGCCAGCCTGCGGATGCAGCTACCTGAGTTCTCCTTTCTATAGGAATAGCTaGTGGTCTTTCCCTTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: APGADAEPACGCSYLSSPFYRNS*WSFPYV Trigger: CACATAAGGGAAAGACCAGCAGCTATTCCTATAGAA...AGGAGAACTCAGGTAGCTGCATCCGCAGGCTGGCTCGGCATCAGCACCAGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
||
| CDS-3UTR TCA 90 bp | GCTGGACAAGTACCACCTCTGCAGAAAGCCACAGTGAGCCACACTCTGCTCTCCAAAAATTCTCCAGTGTaGGCTTGGCCACAGTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: AGQVPPLQKATVSHTLLSKNSPV*AWPQLL Trigger: GAGTAACTGTGGCCAAGCTCACACTGGAGAATTTTT...GGAGAGCAGAGTGTGGCTCACTGTGGCTTTCTGCAGAGGTGGTACTTGTCCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
||
| CDS-3UTR TCA 90 bp | GCTCCTGGTGCTGATGCCGAGCCAGCCTGCGGATGCAGCTACCTGAGTTCTCCTAATCAGTACAAAATCTaGGAATCAAGTCCTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: APGADAEPACGCSYLSSPNQYKI*ESSPWL Trigger: AAGCCAAGGACTTGATTCTCAGATTTTGTACTGATT...AGGAGAACTCAGGTAGCTGCATCCGCAGGCTGGCTCGGCATCAGCACCAGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
||
| CDS-3UTR CCA 90 bp | GCCATAGCAGCCTCAGATTCCCAAGCTGTAGTCGTTCCTCTGGCTGGAGAGCAGACTCTTTCCCGGGTATaGTTGCTCATAGGAAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: AIAASDSQAVVVPLAGEQTLSRV*LLIGKV Trigger: TACCTTTCCTATGAGCAACCATACCCGGGAAAGAGT...CTGCTCTCCAGCCAGAGGAACGACTACAGCTTGGGAATCTGAGGCTGCTATGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
||
| CDS-3UTR GCA 90 bp | GCCAGCCTGCGGATGCAGCTACCTGAGTTCTCCTGGCTATGGGCGACTGTGATCCTTTCTTTAACCCCGTaGACAAACCAAAATCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: ASLRMQLPEFSWLWATVILSLTP*TNQNQI Trigger: TATCTGATTTTGGTTTGTGCACGGGGTTAAAGAAAG...GATCACAGTCGCCCATAGCCAGGAGAACTCAGGTAGCTGCATCCGCAGGCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
||
| CDS-3UTR TCA 90 bp | GGGAACAAAGGGTCACCAGCTGGACAAGTACCACCTCTGCAGAAAGCCACAGTGGAAGTCATCAAAGTTTaGGGTGTCATCTATACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GNKGSPAGQVPPLQKATVEVIKV*GVIYTP Trigger: CGGAGTATAGATGACACCTCAAACTTTGATGACTTC...CACTGTGGCTTTCTGCAGAGGTGGTACTTGTCCAGCTGGTGACCCTTTGTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
||
| CDS-3UTR GCA 90 bp | GTTGAAGTCAGCGTCCTTAAGTTCCTTGGAGCCGGTACAGAAACTGTCTTCATGCACTTCCGGAGGAAATaGCAGAGTCTCCTTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VEVSVLKFLGAGTETVFMHFRRK*QSLLPA Trigger: AGCTGGAAGGAGACTCTGGCATTTCCTCCGGAAGTG...CATGAAGACAGTTTCTGTACCGGCTCCAAGGAACTTAAGGACGCTGACTTCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
||
| CDS-3UTR TCA 90 bp | GCGTCCTTAAGTTCCTTGGAGCCGGTACAGAAACTGTCTTCATGTAGAGCCCACAGAACGGATGACCTTTaGTTTCTTCCACACCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: ASLSSLEPVQKLSSCRAHRTDDL*FLPHHH Trigger: ATGGTGGTGTGGAAGAAATCAAAGGTCATCCGTTCT...GTGGGCTCTACATGAAGACAGTTTCTGTACCGGCTCCAAGGAACTTAAGGACGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
||
| CDS-3UTR GCA 90 bp | GGAAATTCTAATGTCGTTGAAGTCAGCGTCCTTAAGTTCCTTGGAGCCGGTACACACCCAGGCTCCATCTaGTTCCACCAAAATGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GNSNVVEVSVLKFLGAGTHPGSI*FHQNVP Trigger: AGGGACATTTTGGTGGAAGCAGATGGAGCCTGGGTG...TGTACCGGCTCCAAGGAACTTAAGGACGCTGACTTCAACGACATTAGAATTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
||
| CDS-3UTR CCA 90 bp | GTTGAAGTCAGCGTCCTTAAGTTCCTTGGAGCCGGTACAGAAACTGTCTTCATGTCCTCAGGATCTTCATaGCATAGATGTGCCCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VEVSVLKFLGAGTETVFMSSGSS*HRCAPC Trigger: ACACGGGGCACATCTATGCCATGAAGATCCTGAGGA...CATGAAGACAGTTTCTGTACCGGCTCCAAGGAACTTAAGGACGCTGACTTCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
||
| CDS-3UTR CCA 90 bp | GCGTCCTTAAGTTCCTTGGAGCCGGTACAGAAACTGTCTTCATGTAGAGCCCACGAAAAACCCAGTCTTTaGATTTGTAGTCGGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASLSSLEPVQKLSSCRAHEKPSL*ICSRAL Trigger: CAGAGCCCGACTACAAATCCAAAGACTGGGTTTTTC...GTGGGCTCTACATGAAGACAGTTTCTGTACCGGCTCCAAGGAACTTAAGGACGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
||
| 3UTR CAA 72 bp | GCTCCACTCCCTGCTGACAGCCACTGTTCAGGATCTTaGGTTCATTGGAAAACAATGGCACTAGTGCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: APLPADSHCSGS*VHWKTMALVQS Trigger: TGATTGCACTAGTGCCATTGTTTTCCAATGAACCAAAGATCCTGAACAGTGGCTGTCAGCAGGGAGTGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
||
| CDS-3UTR GCA 90 bp | TCATGTAGAGCCCACAATGTCCAAACCAACAGGGCAAATGTTCTACTAACAGCACACCCAGGCTCCATCTaGTTCCACCAAAATGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SCRAHNVQTNRANVLLTAHPGSI*FHQNVP Trigger: AGGGACATTTTGGTGGAAGCAGATGGAGCCTGGGTG...TGCTGTTAGTAGAACATTTGCCCTGTTGGTTTGGACATTGTGGGCTCTACATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
||
| CDS-3UTR TCA 90 bp | CTAATGTCGTTGAAGTCAGCGTCCTTAAGTTCCTTGGAGCCGGTACAGAAACTGTTGGCGGGTTATGTGTaGGGTTTCTGTAGAATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LMSLKSASLSSLEPVQKLLAGYV*GFCRIQ Trigger: CTGAATTCTACAGAAACCTCACACATAACCCGCCAA...CAGTTTCTGTACCGGCTCCAAGGAACTTAAGGACGCTGACTTCAACGACATTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
||
| CDS-3UTR GCA 90 bp | TCATGTAGAGCCCACAATGTCCAAACCAACAGGGCAAATGTTCTACTAACAGCAAGGAAAGGTAGTTGTTaGCCCTGCCGTCATTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SCRAHNVQTNRANVLLTARKGSC*PCRHCH Trigger: ATGGCAATGACGGCAGGGGCAACAACTACCTTTCCT...TGCTGTTAGTAGAACATTTGCCCTGTTGGTTTGGACATTGTGGGCTCTACATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
||
| CDS-3UTR GCA 90 bp | TCATGTAGAGCCCACAATGTCCAAACCAACAGGGCAAATGTTCTACTAACAGCAGCCCAGCTGGTGAATTaGATCTATCGCCAAGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SCRAHNVQTNRANVLLTAAQLVN*IYRQDS Trigger: ACTGTCTTGGCGATAGATGCAATTCACCAGCTGGGC...TGCTGTTAGTAGAACATTTGCCCTGTTGGTTTGGACATTGTGGGCTCTACATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
||
| 3UTR CAA 72 bp | AAAGGACTCACCAAAATAAATCAGGAGCTGATGGCCTaGATGAAAGAGGGGTCACAAGGCATTGCTCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KGLTKINQELMA*MKEGSQGIAQC Trigger: GCACTGAGCAATGCCTTGTGACCCCTCTTTCATCAAGGCCATCAGCTCCTGATTTATTTTGGTGAGTCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
||
| CDS-3UTR TCA 90 bp | CAACAGGGCAAATGTTCTACTAACAGCAGCTACAGAAGATGGCTTTTCACTGATCTTTCTGCTCGGATATaGGCCACCTGCTCTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QQGKCSTNSSYRRWLFTDLSARI*ATCSFS Trigger: TGAGAAAGAGCAGGTGGCTCATATCCGAGCAGAAAG...ATCAGTGAAAAGCCATCTTCTGTAGCTGCTGTTAGTAGAACATTTGCCCTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
||
| CDS-3UTR TCA 90 bp | GGAAATTCTAATGTCGTTGAAGTCAGCGTCCTTAAGTTCCTTGGAGCCGGTACATGTAGCCAGTCTGCATaGATACTTCTGGAGCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: GNSNVVEVSVLKFLGAGTCSQSA*ILLEQC Trigger: ACATTGCTCCAGAAGTATTCATGCAGACTGGCTACA...TGTACCGGCTCCAAGGAACTTAAGGACGCTGACTTCAACGACATTAGAATTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
||
| CDS-3UTR GCA 90 bp | GTTGAAGTCAGCGTCCTTAAGTTCCTTGGAGCCGGTACAGAAACTGTCTTCATGGTTTCTTTACGAGCATaGTGCGATCGACGTAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: VEVSVLKFLGAGTETVFMVSLRA*CDRRNF Trigger: AAAGTTACGTCGATCGCAGCATGCTCGTAAAGAAAC...CATGAAGACAGTTTCTGTACCGGCTCCAAGGAACTTAAGGACGCTGACTTCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
||
| CDS-3UTR GCA 90 bp | GCGTCCTTAAGTTCCTTGGAGCCGGTACAGAAACTGTCTTCATGTAGAGCCCACCTTTCTTTAACCCCGTaGACAAACCAAAATCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: ASLSSLEPVQKLSSCRAHLSLTP*TNQNQI Trigger: TATCTGATTTTGGTTTGTGCACGGGGTTAAAGAAAG...GTGGGCTCTACATGAAGACAGTTTCTGTACCGGCTCCAAGGAACTTAAGGACGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
||
| CDS-3UTR CCA 90 bp | GGAAATTCTAATGTCGTTGAAGTCAGCGTCCTTAAGTTCCTTGGAGCCGGTACAGAAAAACCCAGTCTTTaGATTTGTAGTCGGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GNSNVVEVSVLKFLGAGTEKPSL*ICSRAL Trigger: CAGAGCCCGACTACAAATCCAAAGACTGGGTTTTTC...TGTACCGGCTCCAAGGAACTTAAGGACGCTGACTTCAACGACATTAGAATTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
||
| CDS-3UTR TCA 90 bp | TCATGTAGAGCCCACAATGTCCAAACCAACAGGGCAAATGTTCTACTAACAGCAAAAAATTCTCCAGTGTaGGCTTGGCCACAGTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: SCRAHNVQTNRANVLLTAKNSPV*AWPQLL Trigger: GAGTAACTGTGGCCAAGCTCACACTGGAGAATTTTT...TGCTGTTAGTAGAACATTTGCCCTGTTGGTTTGGACATTGTGGGCTCTACATGA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
||
| CDS-3UTR TCA 90 bp | AGCTCATATACCCTGCAGATATTAAGGCAGCTAAAGTCAGGGAGGCTTATCTACAGAACGGATGACCTTTaGTTTCTTCCACACCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSYTLQILRQLKSGRLIYRTDDL*FLPHHH Trigger: ATGGTGGTGTGGAAGAAATCAAAGGTCATCCGTTCT...GTAGATAAGCCTCCCTGACTTTAGCTGCCTTAATATCTGCAGGGTATATGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
||
| CDS-3UTR GCA 90 bp | TTGAAGTCAGCGTCCTTAAGTTCCTTGGAGCCGGTACAGAAACTGTCTTCATGTTCTTTACGAGCATGCTaGGATCGACGTAACTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKSASLSSLEPVQKLSSCSLRAC*DRRNFF Trigger: GAAAAAGTTACGTCGATCGCAGCATGCTCGTAAAGA...ACATGAAGACAGTTTCTGTACCGGCTCCAAGGAACTTAAGGACGCTGACTTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| CDS-3UTR GCA 90 bp | GTTGAAGTCAGCGTCCTTAAGTTCCTTGGAGCCGGTACAGAAACTGTCTTCATGTTCTATAGGAATAGCTaGTGGTCTTTCCCTTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: VEVSVLKFLGAGTETVFMFYRNS*WSFPYV Trigger: CACATAAGGGAAAGACCAGCAGCTATTCCTATAGAA...CATGAAGACAGTTTCTGTACCGGCTCCAAGGAACTTAAGGACGCTGACTTCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| CDS-3UTR CCA 90 bp | CAACAGGGCAAATGTTCTACTAACAGCAGCTACAGAAGATGGCTTTTCACTGATTGTAGTCGGGCTCTGTaGTATTCGGCACTAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QQGKCSTNSSYRRWLFTDCSRAL*YSALER Trigger: TCTTTCTAGTGCCGAATACCACAGAGCCCGACTACA...ATCAGTGAAAAGCCATCTTCTGTAGCTGCTGTTAGTAGAACATTTGCCCTGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111644.2 |
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| CDS-3UTR TCA 90 bp | TTGAAGTCAGCGTCCTTAAGTTCCTTGGAGCCGGTACAGAAACTGTCTTCATGTTTTGAATTCATGTTCTaGAATGAGAAGTCGCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LKSASLSSLEPVQKLSSCFEFMF*NEKSLG Trigger: GCCAAGCGACTTCTCATTTCAGAACATGAATTCAAA...ACATGAAGACAGTTTCTGTACCGGCTCCAAGGAACTTAAGGACGCTGACTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| CDS-3UTR TCA 90 bp | TCATGTAGAGCCCACAATGTCCAAACCAACAGGGCAAATGTTCTACTAACAGCAGAAGTCATCAAAGTTTaGGGTGTCATCTATACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SCRAHNVQTNRANVLLTAEVIKV*GVIYTP Trigger: CGGAGTATAGATGACACCTCAAACTTTGATGACTTC...TGCTGTTAGTAGAACATTTGCCCTGTTGGTTTGGACATTGTGGGCTCTACATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| CDS-3UTR GCA 90 bp | AAGTGGGCAGCCATGTTAATGCTGCAAAGCAAACTTCCCAAAATGCCTCTCCACGTTTCTCTCTCTTCATaGTGTAAAATTAGGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KWAAMLMLQSKLPKMPLHVSLSS*CKIRLL Trigger: CAGCAACCTAATTTTACAGCATGAAGAGAGAGAAAC...GTGGAGAGGCATTTTGGGAAGTTTGCTTTGCAGCATTAACATGGCTGCCCACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| CDS-3UTR GCA 90 bp | CTAATGTCGTTGAAGTCAGCGTCCTTAAGTTCCTTGGAGCCGGTACAGAAACTGGTTTCTCTCTCTTCATaGTGTAAAATTAGGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LMSLKSASLSSLEPVQKLVSLSS*CKIRLL Trigger: CAGCAACCTAATTTTACAGCATGAAGAGAGAGAAAC...CAGTTTCTGTACCGGCTCCAAGGAACTTAAGGACGCTGACTTCAACGACATTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| CDS-3UTR GCA 90 bp | TCATGTAGAGCCCACAATGTCCAAACCAACAGGGCAAATGTTCTACTAACAGCAGTTTCTTTACGAGCATaGTGCGATCGACGTAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: SCRAHNVQTNRANVLLTAVSLRA*CDRRNF Trigger: AAAGTTACGTCGATCGCAGCATGCTCGTAAAGAAAC...TGCTGTTAGTAGAACATTTGCCCTGTTGGTTTGGACATTGTGGGCTCTACATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| CDS-3UTR TCA 90 bp | TCATGTAGAGCCCACAATGTCCAAACCAACAGGGCAAATGTTCTACTAACAGCATTTGAATTCATGTTCTaGAATGAGAAGTCGCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SCRAHNVQTNRANVLLTAFEFMF*NEKSLG Trigger: GCCAAGCGACTTCTCATTTCAGAACATGAATTCAAA...TGCTGTTAGTAGAACATTTGCCCTGTTGGTTTGGACATTGTGGGCTCTACATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| CDS-3UTR TCA 90 bp | TTGAAGTCAGCGTCCTTAAGTTCCTTGGAGCCGGTACAGAAACTGTCTTCATGTAATCAGTACAAAATCTaGGAATCAAGTCCTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LKSASLSSLEPVQKLSSCNQYKI*ESSPWL Trigger: AAGCCAAGGACTTGATTCTCAGATTTTGTACTGATT...ACATGAAGACAGTTTCTGTACCGGCTCCAAGGAACTTAAGGACGCTGACTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| CDS-3UTR CCA 90 bp | CTTAAAGGACTCACCAAAATAAATCAGGAGCTGATGGCCTTGATGAAAGAGGGGTCTGTATGTTTCTTGTaGTGTTTCAGAGCAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKGLTKINQELMALMKEGSVCFL*CFRAER Trigger: CCTTTCTGCTCTGAAACACCACAAGAAACATACAGA...CCCCTCTTTCATCAAGGCCATCAGCTCCTGATTTATTTTGGTGAGTCCTTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| CDS-3UTR TCA 90 bp | AACTGTCTTCATGTAGAGCCCACAATGTCCAAACCAACAGGGCAAATGTTCTACTTTTGTAGGTGTAATTaGGAAAAACCCAGTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NCLHVEPTMSKPTGQMFYFCRCN*EKPSLW Trigger: CCAAAGACTGGGTTTTTCTCAATTACACCTACAAAA...GTAGAACATTTGCCCTGTTGGTTTGGACATTGTGGGCTCTACATGAAGACAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| CDS-3UTR TCA 90 bp | TCATGTAGAGCCCACAATGTCCAAACCAACAGGGCAAATGTTCTACTAACAGCATTTTGTAGGTGTAATTaGGAAAAACCCAGTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SCRAHNVQTNRANVLLTAFCRCN*EKPSLW Trigger: CCAAAGACTGGGTTTTTCTCAATTACACCTACAAAA...TGCTGTTAGTAGAACATTTGCCCTGTTGGTTTGGACATTGTGGGCTCTACATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| CDS-3UTR TCA 90 bp | GTGTATAATGGGAAAAAGTCAGTATCAGAGGATCTCTGCAAATTATTTGCACAATTGGCGGGTTATGTGTaGGGTTTCTGTAGAATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VYNGKKSVSEDLCKLFAQLAGYV*GFCRIQ Trigger: CTGAATTCTACAGAAACCTCACACATAACCCGCCAA...TTGTGCAAATAATTTGCAGAGATCCTCTGATACTGACTTTTTCCCATTATACAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| CDS-3UTR CAA 90 bp | GCCATAGCAGCCTCAGATTCCCAAGCTGTAGTCGTTCCTCTGGCTGGAGAGCAGCTTTCCCGGGTATGGTaGCTCATAGGAAAGGTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: AIAASDSQAVVVPLAGEQLSRVW*LIGKVV Trigger: AACTACCTTTCCTATGAGCAACCATACCCGGGAAAG...CTGCTCTCCAGCCAGAGGAACGACTACAGCTTGGGAATCTGAGGCTGCTATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| CDS-3UTR CAA 90 bp | GCCATAGCAGCCTCAGATTCCCAAGCTGTAGTCGTTCCTCTGGCTGGAGAGCAGGGAAGTCATCAAAGTTaGAGGTGTCATCTATACTCC | + |
|
Preference number: 5 (lower is better) Translates to: AIAASDSQAVVVPLAGEQGSHQS*RCHLYS Trigger: GGAGTATAGATGACACCTCAAACTTTGATGACTTCC...CTGCTCTCCAGCCAGAGGAACGACTACAGCTTGGGAATCTGAGGCTGCTATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| CDS-3UTR CAA 90 bp | GCTCAGTGCCCTCAGGAGAAGCATTCCTCCCATAAAGTCTCACTATATCAATCAAGCCCAGCTGGTGAATaGCATCTATCGCCAAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: AQCPQEKHSSHKVSLYQSSPAGE*HLSPRQ Trigger: CTGTCTTGGCGATAGATGCAATTCACCAGCTGGGCT...TGATTGATATAGTGAGACTTTATGGGAGGAATGCTTCTCCTGAGGGCACTGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| CDS-3UTR CAA 90 bp | CAATGTCCAAACCAACAGGGCAAATGTTCTACTAACAGCAGCTACAGAAGATGGAGCCCAGCTGGTGAATaGCATCTATCGCCAAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: QCPNQQGKCSTNSSYRRWSPAGE*HLSPRQ Trigger: CTGTCTTGGCGATAGATGCAATTCACCAGCTGGGCT...CCATCTTCTGTAGCTGCTGTTAGTAGAACATTTGCCCTGTTGGTTTGGACATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| CDS TCA 90 bp | CCCTTATGTGCCCCCAGTCTACACCCTCAAAGAACGGATGACCTTTaGTTTCTTCCACACCACCATTCCCAATTCTGTTTTCAGAATCAG | + |
|
Preference number: 5 (lower is better) Translates to: PLCAPSLHPQRTDDL*FLPHHHSQFCFQNQ Trigger: CTGATTCTGAAAACAGAATTGGGAATGGTGGTGTGGAAGAAATCAAAGGTCATCCGTTCTTTGAGGGTGTAGACTGGGGGCACATAAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| CDS TCA 90 bp | GGTCTTTCCCTTATGTGCCCCCAGTCTACACCCTCAAAGAACGGATaGCCTTTGATTTCTTCCACACCACCATTCCCAATTCTGTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GLSLMCPQSTPSKNG*PLISSTPPFPILFS Trigger: TGAAAACAGAATTGGGAATGGTGGTGTGGAAGAAATCAAAGGTCATCCGTTCTTTGAGGGTGTAGACTGGGGGCACATAAGGGAAAGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| CDS GCA 90 bp | CTGGTCCTCTTAAGGCGTAAGAACTCTGTTTCTTTACGAGCATGCTaGGATCGACGTAACTTTTTCTCCTCATCTGCCAATCCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LVLLRRKNSVSLRAC*DRRNFFSSSANPSS Trigger: AGAAGAAGGATTGGCAGATGAGGAGAAAAAGTTACGTCGATCGCAGCATGCTCGTAAAGAAACAGAGTTCTTACGCCTTAAGAGGACCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| CDS-3UTR CAA 90 bp | TCATGTAGAGCCCACAATGTCCAAACCAACAGGGCAAATGTTCTACTAACAGCACTTTCCCGGGTATGGTaGCTCATAGGAAAGGTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SCRAHNVQTNRANVLLTALSRVW*LIGKVV Trigger: AACTACCTTTCCTATGAGCAACCATACCCGGGAAAG...TGCTGTTAGTAGAACATTTGCCCTGTTGGTTTGGACATTGTGGGCTCTACATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| CDS TCA 90 bp | TTGAATTCATGTTCTGAAATGAGAAGTCGCTTGGCGGGTTATGTGTaGGGTTTCTGTAGAATTCAGTCCTGTGAGCTTTCTTTAACCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LNSCSEMRSRLAGYV*GFCRIQSCELSLTP Trigger: CGGGGTTAAAGAAAGCTCACAGGACTGAATTCTACAGAAACCTCACACATAACCCGCCAAGCGACTTCTCATTTCAGAACATGAATTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| CDS-3UTR CAA 90 bp | CAATGTCCAAACCAACAGGGCAAATGTTCTACTAACAGCAGCTACAGAAGATGGGGAAGTCATCAAAGTTaGAGGTGTCATCTATACTCC | + |
|
Preference number: 5 (lower is better) Translates to: QCPNQQGKCSTNSSYRRWGSHQS*RCHLYS Trigger: GGAGTATAGATGACACCTCAAACTTTGATGACTTCC...CCATCTTCTGTAGCTGCTGTTAGTAGAACATTTGCCCTGTTGGTTTGGACATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| CDS-3UTR CAA 90 bp | GTGTATAATGGGAAAAAGTCAGTATCAGAGGATCTCTGCAAATTATTTGCACAAGCATCCAGTAAAAGGTaGTCTGGTTTGACGTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: VYNGKKSVSEDLCKLFAQASSKR*SGLTSR Trigger: CCGGGACGTCAAACCAGACAACCTTTTACTGGATGC...TTGTGCAAATAATTTGCAGAGATCCTCTGATACTGACTTTTTCCCATTATACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001675.14 |
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| CDS CCA 72 bp | AGTGTGAGCTTGGCCACAGTTACTCTTTCCCGGGTATaGTTGCTCATAGGAAAGGTAGTTGTTGCCCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SVSLATVTLSRV*LLIGKVVVAPA Trigger: GGCAGGGGCAACAACTACCTTTCCTATGAGCAACCATACCCGGGAAAGAGTAACTGTGGCCAAGCTCACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 ENSMUST00000203318.2 |
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| CDS GCA 72 bp | CCAGGCTCCATCTGCTTCCACCAAAATGTCCCTTTCTaGTCGGATATGAGCCACCTGCTCTTTCTCAAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: PGSICFHQNVPF*SDMSHLLFLKH Trigger: ATGCTTGAGAAAGAGCAGGTGGCTCATATCCGAGCAGAAAGGGACATTTTGGTGGAAGCAGATGGAGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| CDS GCA 72 bp | GGTGTCATCTATACTCCGGATTTCTATAGGAATAGCTaGTGGTCTTTCCCTTATGTGCCCCCAGTCTACACC | + |
|
Preference number: 6 (lower is better) Translates to: GVIYTPDFYRNS*WSFPYVPPVYT Trigger: GGTGTAGACTGGGGGCACATAAGGGAAAGACCAGCAGCTATTCCTATAGAAATCCGGAGTATAGATGACACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| CDS CCA 72 bp | GTCATCTATACTCCGGATTTCTATAGGAATAGCTGCTaGTCTTTCCCTTATGTGCCCCCAGTCTACACCCTC | + |
|
Preference number: 6 (lower is better) Translates to: VIYTPDFYRNSC*SFPYVPPVYTL Trigger: GAGGGTGTAGACTGGGGGCACATAAGGGAAAGACCAGCAGCTATTCCTATAGAAATCCGGAGTATAGATGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| CDS TCA 72 bp | CTTATGTGCCCCCAGTCTACACCCTCAAAGAACGGATaGCCTTTGATTTCTTCCACACCACCATTCCCAATT | + |
|
Preference number: 6 (lower is better) Translates to: LMCPQSTPSKNG*PLISSTPPFPI Trigger: AATTGGGAATGGTGGTGTGGAAGAAATCAAAGGTCATCCGTTCTTTGAGGGTGTAGACTGGGGGCACATAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| CDS GCA 72 bp | AAAACTGTAGAACATCTTCACCACCCAGGCTCCATCTaGTTCCACCAAAATGTCCCTTTCTGCTCGGATATG | + |
|
Preference number: 6 (lower is better) Translates to: KTVEHLHHPGSI*FHQNVPFCSDM Trigger: CATATCCGAGCAGAAAGGGACATTTTGGTGGAAGCAGATGGAGCCTGGGTGGTGAAGATGTTCTACAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| CDS GCA 72 bp | CTCTTAAGGCGTAAGAACTCTGTTTCTTTACGAGCATaGTGCGATCGACGTAACTTTTTCTCCTCATCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LLRRKNSVSLRA*CDRRNFFSSSA Trigger: GGCAGATGAGGAGAAAAAGTTACGTCGATCGCAGCATGCTCGTAAAGAAACAGAGTTCTTACGCCTTAAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| CDS TCA 72 bp | TGTTCTGAAATGAGAAGTCGCTTGGCGGGTTATGTGTaGGGTTTCTGTAGAATTCAGTCCTGTGAGCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CSEMRSRLAGYV*GFCRIQSCELS Trigger: AGAAAGCTCACAGGACTGAATTCTACAGAAACCTCACACATAACCCGCCAAGCGACTTCTCATTTCAGAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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| CDS GCA 72 bp | TTAAGGCGTAAGAACTCTGTTTCTTTACGAGCATGCTaGGATCGACGTAACTTTTTCTCCTCATCTGCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: LRRKNSVSLRAC*DRRNFFSSSAN Trigger: ATTGGCAGATGAGGAGAAAAAGTTACGTCGATCGCAGCATGCTCGTAAAGAAACAGAGTTCTTACGCCTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001675.14 ENSMUST00000111644.2 |
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