Pregenerated sensors for STK38 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024006Ensembl transcript IDs: ENSMUST00000009138.13, ENSMUST00000119274.3, ENSMUST00000141431.8, ENSMUST00000142366.3, ENSMUST00000156732.3, ENSMUST00000232836.2, ENSMUST00000233329.2, ENSMUST00000233510.2, ENSMUST00000233606.2
Found 212 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCCTTGACTCCCAAGGAGGCTGTGGGCACTTGCATGGCAGCACTTaGAGGTATTGCTTGCTGGTAGGCAGTGTGTGCCTCAAGATGATC | + |
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Preference number: 1 (lower is better) Translates to: CLDSQGGCGHLHGST*RYCLLVGSVCLKMI Trigger: GATCATCTTGAGGCACACACTGCCTACCAGCAAGCAATACCTGCAAGTGCTGCCATGCAAGTGCCCACAGCCTCCTTGGGAGTCAAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000156732.3 |
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| 3UTR GCA 90 bp | GTTTCTCATGAGAGAACGCCACAGCAGAGGCGTATCAGCCCAAGCTaGAGGCAACCCTTTTGGGTGGAGGGACAAGAATGCCCCCAAGAA | + |
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Preference number: 1 (lower is better) Translates to: VSHERTPQQRRISPS*RQPFWVEGQECPQE Trigger: TTCTTGGGGGCATTCTTGTCCCTCCACCCAAAAGGGTTGCCTGCAGCTTGGGCTGATACGCCTCTGCTGTGGCGTTCTCTCATGAGAAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000156732.3 |
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| 3UTR CCA 90 bp | ACCATGAGTGAAGGCTGTGGAAAGCCACTTGTGAGGGCCAAGGTATaGGGAGAAACCACCGGCACCTGCGAGACCGAGATTGTTCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: TMSEGCGKPLVRAKV*GETTGTCETEIVPS Trigger: AGAAGGAACAATCTCGGTCTCGCAGGTGCCGGTGGTTTCTCCCCATACCTTGGCCCTCACAAGTGGCTTTCCACAGCCTTCACTCATGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
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| 3UTR CCA 90 bp | CACAAACTGTCTGCCTCCACTAGAATGTCACGCTCCGCACGAATGTaGCCAACCTGCTCCTTCTCGAGCATGTCTGCTTTGCGCAGGATT | + |
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Preference number: 1 (lower is better) Translates to: HKLSASTRMSRSARM*PTCSFSSMSALRRI Trigger: AATCCTGCGCAAAGCAGACATGCTCGAGAAGGAGCAGGTTGGCCACATTCGTGCGGAGCGTGACATTCTAGTGGAGGCAGACAGTTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233329.2 |
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| 3UTR TCA 90 bp | TTGCTTGCTGGTAGGCAGTGTGTGCCTCAAGATGATCTACAGCCGTaGAGGGAAAGTAAGGGTTGTCCACAGGGTCCAGAACTCCTTGGC | + |
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Preference number: 1 (lower is better) Translates to: LLAGRQCVPQDDLQP*RESKGCPQGPELLG Trigger: GCCAAGGAGTTCTGGACCCTGTGGACAACCCTTACTTTCCCTTCACGGCTGTAGATCATCTTGAGGCACACACTGCCTACCAGCAAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000156732.3 ENSMUST00000232836.2 |
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| 3UTR GCA 90 bp | CCGCACGAATGTGGCCAACCTGCTCCTTCTCGAGCATGTCTGCTTTaGGCAGGATTTTCATTGCGTACACATGCCCTGTGTCTTTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: PHECGQPAPSRACLL*AGFSLRTHALCLSS Trigger: AGAAGAAAGACACAGGGCATGTGTACGCAATGAAAATCCTGCGCAAAGCAGACATGCTCGAGAAGGAGCAGGTTGGCCACATTCGTGCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233329.2 |
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| 3UTR GCA 90 bp | TTGCATGGCAGCACTTGCAGGTATTGCTTGCTGGTAGGCAGTGTGTaGCTCAAGATGATCTACAGCCGTGAAGGGAAAGTAAGGGTTGTC | + |
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Preference number: 1 (lower is better) Translates to: LHGSTCRYCLLVGSV*LKMIYSREGKVRVV Trigger: GACAACCCTTACTTTCCCTTCACGGCTGTAGATCATCTTGAGGCACACACTGCCTACCAGCAAGCAATACCTGCAAGTGCTGCCATGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000156732.3 ENSMUST00000232836.2 |
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| 3UTR CCA 90 bp | TTCACAAACTTCGGGACCAGCGGAGGGCCGATCCCAGTTGTAGCTTaGCCAATGACTGCAAGTTACCACACAGGTGCAAATAATGCCTTA | + |
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Preference number: 1 (lower is better) Translates to: FTNFGTSGGPIPVVA*PMTASYHTGANNAL Trigger: TAAGGCATTATTTGCACCTGTGTGGTAACTTGCAGTCATTGGCCAAGCTACAACTGGGATCGGCCCTCCGCTGGTCCCGAAGTTTGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000156732.3 |
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| 3UTR CCA 90 bp | GTCGGAAAGTTTCACATGGCCCTTGCTGTCCAAGAGAAGGTTGTCTaGCTTGATATCTCTGTGGATGAATCCCAGCTGGTGAATGGAGTC | + |
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Preference number: 1 (lower is better) Translates to: VGKFHMALAVQEKVV*LDISVDESQLVNGV Trigger: GACTCCATTCACCAGCTGGGATTCATCCACAGAGATATCAAGCCAGACAACCTTCTCTTGGACAGCAAGGGCCATGTGAAACTTTCCGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233329.2 ENSMUST00000233510.2 ENSMUST00000233606.2 |
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| 3UTR CCA 90 bp | GAATTTTCAGCTATAAGGAGAAAAATACTTGGTGGGCTTGGCAGGTaGCATATCATCACCACAGCACAGGGCGTTGGCTGGTACTCAGTG | + |
|
Preference number: 1 (lower is better) Translates to: EFSAIRRKILGGLGR*HIITTAQGVGWYSV Trigger: CACTGAGTACCAGCCAACGCCCTGTGCTGTGGTGATGATATGCCACCTGCCAAGCCCACCAAGTATTTTTCTCCTTATAGCTGAAAATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
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| 3UTR GCA 90 bp | AGCCTTGTTCTCTTTAATCGAAGAAACTCTGTTTCCTTCCGAGCGTaGGCGGATCTTCTGAGTCGTTTCTCTTCGTCTTTCAGGCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: SLVLFNRRNSVSFRA*ADLLSRFSSSFRPS Trigger: AGAAGGCCTGAAAGACGAAGAGAAACGACTCAGAAGATCCGCGCACGCTCGGAAGGAAACAGAGTTTCTTCGATTAAAGAGAACAAGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233329.2 |
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| 3UTR CCA 90 bp | CCACCGGCACCTGCGAGACCGAGATTGTTCCTTCTGCCACACTGTTaGCTGTTCACACAGACTTTCATTATTGCCTTATTTAACTACAGA | + |
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Preference number: 1 (lower is better) Translates to: PPAPARPRLFLLPHC*LFTQTFIIALFNYR Trigger: TCTGTAGTTAAATAAGGCAATAATGAAAGTCTGTGTGAACAGCCAACAGTGTGGCAGAAGGAACAATCTCGGTCTCGCAGGTGCCGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
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| 3UTR CCA 90 bp | AACTACAGAATTTTCAGCTATAAGGAGAAAAATACTTGGTGGGCTTaGCAGGTGGCATATCATCACCACAGCACAGGGCGTTGGCTGGTA | + |
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Preference number: 1 (lower is better) Translates to: NYRIFSYKEKNTWWA*QVAYHHHSTGRWLV Trigger: TACCAGCCAACGCCCTGTGCTGTGGTGATGATATGCCACCTGCCAAGCCCACCAAGTATTTTTCTCCTTATAGCTGAAAATTCTGTAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
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| 3UTR CCA 90 bp | TTATTTAACTACAGAATTTTCAGCTATAAGGAGAAAAATACTTGGTaGGCTTGGCAGGTGGCATATCATCACCACAGCACAGGGCGTTGG | + |
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Preference number: 1 (lower is better) Translates to: LFNYRIFSYKEKNTW*AWQVAYHHHSTGRW Trigger: CCAACGCCCTGTGCTGTGGTGATGATATGCCACCTGCCAAGCCCACCAAGTATTTTTCTCCTTATAGCTGAAAATTCTGTAGTTAAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
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| 3UTR CAA 90 bp | CCAGCGGGCTGGTCCTGCCTTGACTCCCAAGGAGGCTGTGGGCACTaGCATGGCAGCACTTGCAGGTATTGCTTGCTGGTAGGCAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: PAGWSCLDSQGGCGH*HGSTCRYCLLVGSV Trigger: CACACTGCCTACCAGCAAGCAATACCTGCAAGTGCTGCCATGCAAGTGCCCACAGCCTCCTTGGGAGTCAAGGCAGGACCAGCCCGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000156732.3 |
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| 3UTR-3UTR CCA 90 bp | ACACGGTTGCACCATGGATTGAGGAATGAGCTCAAGGACCCAGCGGGCTGGTCCCTGTGGGCACTTGCATaGCAGCACTTGCAGGTATTG | + |
|
Preference number: 2 (lower is better) Translates to: TRLHHGLRNELKDPAGWSLWALA*QHLQVL Trigger: CAATACCTGCAAGTGCTGCCATGCAAGTGCCCACAG...GGACCAGCCCGCTGGGTCCTTGAGCTCATTCCTCAATCCATGGTGCAACCGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000156732.3 |
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| 3UTR-3UTR GCA 90 bp | ATTCTCCCATGCTCACCACACACTCCTGCAAACACACGGGGATCGAGCCTCAACGTGGAGGGACAAGAATaGCCCCAAGAAGGCATCTGC | + |
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Preference number: 2 (lower is better) Translates to: ILPCSPHTPANTRGSSLNVEGQE*PQEGIC Trigger: GCAGATGCCTTCTTGGGGGCATTCTTGTCCCTCCAC...GTTGAGGCTCGATCCCCGTGTGTTTGCAGGAGTGTGTGGTGAGCATGGGAGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
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| 3UTR CAA 90 bp | CAAGGAGGCTGTGGGCACTTGCATGGCAGCACTTGCAGGTATTGCTaGCTGGTAGGCAGTGTGTGCCTCAAGATGATCTACAGCCGTGAA | + |
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Preference number: 2 (lower is better) Translates to: QGGCGHLHGSTCRYC*LVGSVCLKMIYSRE Trigger: TTCACGGCTGTAGATCATCTTGAGGCACACACTGCCTACCAGCAAGCAATACCTGCAAGTGCTGCCATGCAAGTGCCCACAGCCTCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000156732.3 |
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| 3UTR-3UTR TCA 90 bp | GTTTCTCATGAGAGAACGCCACAGCAGAGGCGTATCAGCCCAAGCTGCAGGCAAGGTTGCACCATGGATTaGGGAATGAGCTCAAGGACC | + |
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Preference number: 2 (lower is better) Translates to: VSHERTPQQRRISPSCRQGCTMD*GMSSRT Trigger: GGTCCTTGAGCTCATTCCTCAATCCATGGTGCAACC...TTGCCTGCAGCTTGGGCTGATACGCCTCTGCTGTGGCGTTCTCTCATGAGAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000156732.3 |
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| 3UTR-3UTR TCA 90 bp | GGCAAAATGGCTAAAGTTGGGGTAAGGAAATATCAAGACAAACACGGTTGCACCGGGCTGGTCCTGCCTTaGCTCCCAAGGAGGCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: GKMAKVGVRKYQDKHGCTGLVLP*LPRRLW Trigger: CCACAGCCTCCTTGGGAGTCAAGGCAGGACCAGCCC...GGTGCAACCGTGTTTGTCTTGATATTTCCTTACCCCAACTTTAGCCATTTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000156732.3 |
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| 3UTR-3UTR GCA 90 bp | CCACCGGCACCTGCGAGACCGAGATTGTTCCTTCTGCCACACTGTTGGCTGTTCTGGCCGATGGAAAAATaGTTGTCTCTGTCCTATCAG | + |
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Preference number: 2 (lower is better) Translates to: PPAPARPRLFLLPHCWLFWPMEK*LSLSYQ Trigger: CTGATAGGACAGAGACAAGCATTTTTCCATCGGCCA...GAACAGCCAACAGTGTGGCAGAAGGAACAATCTCGGTCTCGCAGGTGCCGGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
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| 3UTR-3UTR GCA 90 bp | CACTTGCATGGCAGCACTTGCAGGTATTGCTTGCTGGTAGGCAGTGTGTGCCTCCTTGGCAGTGCCCAGTaGCTTTATGGGCTTTCTAAG | + |
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Preference number: 2 (lower is better) Translates to: HLHGSTCRYCLLVGSVCLLGSAQ*LYGLSK Trigger: CTTAGAAAGCCCATAAAGGCACTGGGCACTGCCAAG...GAGGCACACACTGCCTACCAGCAAGCAATACCTGCAAGTGCTGCCATGCAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
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| 3UTR CAA 90 bp | TCCGCACGAATGTGGCCAACCTGCTCCTTCTCGAGCATGTCTGCTTaGCGCAGGATTTTCATTGCGTACACATGCCCTGTGTCTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: SARMWPTCSFSSMSA*RRIFIAYTCPVSFF Trigger: GAAGAAAGACACAGGGCATGTGTACGCAATGAAAATCCTGCGCAAAGCAGACATGCTCGAGAAGGAGCAGGTTGGCCACATTCGTGCGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233329.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGTGGGCTTGGCAGGTGGCATATCATCACCACAGCACAGGGCGTTGGCTGGTAAAGAAGCAAGCAGCTaGTTATGGCCGATGGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: LVGLAGGISSPQHRALAGKEASS*LWPMEK Trigger: TTTTTCCATCGGCCATAAGCAGCTGCTTGCTTCTTT...ACCAGCCAACGCCCTGTGCTGTGGTGATGATATGCCACCTGCCAAGCCCACCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
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| 3UTR-3UTR GCA 90 bp | TGCAAAGGCCAAAGTCGGAAAGTTTCACATGGCCCTTGCTGTCCAAGAGAAGGTGTTTCCTTCCGAGCGTaGGCGGATCTTCTGAGTCGT | + |
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Preference number: 2 (lower is better) Translates to: CKGQSRKVSHGPCCPREGVSFRA*ADLLSR Trigger: ACGACTCAGAAGATCCGCGCACGCTCGGAAGGAAAC...ACCTTCTCTTGGACAGCAAGGGCCATGTGAAACTTTCCGACTTTGGCCTTTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233329.2 |
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| 3UTR-3UTR CCA 90 bp | TGCAAAGGCCAAAGTCGGAAAGTTTCACATGGCCCTTGCTGTCCAAGAGAAGGTGGTCTCGGAGCAGAATaGTGGGTAGCCGATGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: CKGQSRKVSHGPCCPREGGLGAE*WVADEH Trigger: ATGCTCATCGGCTACCCACCATTCTGCTCCGAGACC...ACCTTCTCTTGGACAGCAAGGGCCATGTGAAACTTTCCGACTTTGGCCTTTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233606.2 |
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| 3UTR-3UTR GCA 90 bp | CACCGGCACCTGCGAGACCGAGATTGTTCCTTCTGCCACACTGTTGGCTGTTCAAAAGAAGCAAGCAGCTaGTTATGGCCGATGGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: HRHLRDRDCSFCHTVGCSKEASS*LWPMEK Trigger: TTTTTCCATCGGCCATAAGCAGCTGCTTGCTTCTTT...TGAACAGCCAACAGTGTGGCAGAAGGAACAATCTCGGTCTCGCAGGTGCCGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
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| 3UTR CAA 90 bp | GCTTCAAAAGAAGCAAGCAGCTGCTTATGGCCGATGGAAAAATGCTaGTCTCTGTCCTATCAGCTTCCCGGTGCACCGTGGAGGAATATC | + |
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Preference number: 2 (lower is better) Translates to: ASKEASSCLWPMEKC*SLSYQLPGAPWRNI Trigger: GATATTCCTCCACGGTGCACCGGGAAGCTGATAGGACAGAGACAAGCATTTTTCCATCGGCCATAAGCAGCTGCTTGCTTCTTTTGAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGGAGTGCCCACTGTAGAGAAGGCTAGCTGGCGTCTGTTTCTTTTCCAGGTCTCATGTTCTGAAAAGTaGAATCACTGGGCAGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: SGVPTVEKASWRLFLFQVSCSEK*NHWAGC Trigger: ACAGCCTGCCCAGTGATTTCACTTTTCAGAACATGA...GACCTGGAAAAGAAACAGACGCCAGCTAGCCTTCTCTACAGTGGGCACTCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000233329.2 ENSMUST00000233510.2 ENSMUST00000233606.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTGGCTTGATATCTCTGTGGATGAATCCCAGCTGGTGAATGGAGTCTATGGCAGTCATCATGTCCCCTaGTCCTTCTCGAGCATGTCT | + |
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Preference number: 2 (lower is better) Translates to: VWLDISVDESQLVNGVYGSHHVP*SFSSMS Trigger: AGACATGCTCGAGAAGGAGCAGGGGACATGATGACT...GCCATAGACTCCATTCACCAGCTGGGATTCATCCACAGAGATATCAAGCCAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233510.2 |
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| 3UTR-3UTR CCA 90 bp | CATGGCAGCACTTGCAGGTATTGCTTGCTGGTAGGCAGTGTGTGCCTCAAGATGGAGAAAAATACTTGGTaGGCTTGGCAGGTGGCATAT | + |
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Preference number: 2 (lower is better) Translates to: HGSTCRYCLLVGSVCLKMEKNTW*AWQVAY Trigger: ATATGCCACCTGCCAAGCCCACCAAGTATTTTTCTC...CATCTTGAGGCACACACTGCCTACCAGCAAGCAATACCTGCAAGTGCTGCCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
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| 3UTR-3UTR TCA 90 bp | GCTCCTTCTCGAGCATGTCTGCTTTGCGCAGGATTTTCATTGCGTACACATGCCATGAATCCCAGCTGGTaGATGGAGTCTATGGCTAAT | + |
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Preference number: 2 (lower is better) Translates to: APSRACLLCAGFSLRTHAMNPSW*MESMAN Trigger: ATTAGCCATAGACTCCATTCACCAGCTGGGATTCAT...GGCATGTGTACGCAATGAAAATCCTGCGCAAAGCAGACATGCTCGAGAAGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233329.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTCCCATTCACAGCAGAACCTCAGAATCAGGCCCTTGGCTTTCTCGGAGACATCATGTTCTGAAAAGTaGAATCACTGGGCAGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: CSHSQQNLRIRPLAFSETSCSEK*NHWAGC Trigger: ACAGCCTGCCCAGTGATTTCACTTTTCAGAACATGA...TGTCTCCGAGAAAGCCAAGGGCCTGATTCTGAGGTTCTGCTGTGAATGGGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233606.2 |
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| 3UTR-3UTR TCA 90 bp | CAAAGGCCAAAGTCGGAAAGTTTCACATGGCCCTTGCTGTCCAAGAGAAGGTTGCAGGCAGGAACTCCATaGTTAGGTAGAGGTTTAGCT | + |
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Preference number: 2 (lower is better) Translates to: QRPKSESFTWPLLSKRRLQAGTP*LGRGLA Trigger: AGCTAAACCTCTACCTAATCATGGAGTTCCTGCCTG...CAACCTTCTCTTGGACAGCAAGGGCCATGTGAAACTTTCCGACTTTGGCCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233329.2 |
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| 3UTR-3UTR GCA 90 bp | GATCGAGCCTCAACTGTTTTATCAATAGAACACAAAGCCACGCCCAGGCCCTTCCGAGATTGTTCCTTCTaGCACACTGTTGGCTGTTCA | + |
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Preference number: 2 (lower is better) Translates to: DRASTVLSIEHKATPRPFRDCSF*HTVGCS Trigger: TGAACAGCCAACAGTGTGGCAGAAGGAACAATCTCG...GAAGGGCCTGGGCGTGGCTTTGTGTTCTATTGATAAAACAGTTGAGGCTCGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
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| 3UTR-3UTR CCA 90 bp | GCAAAGGCCAAAGTCGGAAAGTTTCACATGGCCCTTGCTGTCCAAGAGAAGGTTCTGCATGAACACCTCTaGAGCAATGTAGTCAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: AKAKVGKFHMALAVQEKVLHEHL*SNVVRS Trigger: ACTCCTGACTACATTGCTCCAGAGGTGTTCATGCAG...AACCTTCTCTTGGACAGCAAGGGCCATGTGAAACTTTCCGACTTTGGCCTTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233329.2 ENSMUST00000233510.2 ENSMUST00000233606.2 |
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| 3UTR-3UTR CCA 90 bp | GCAAAGGCCAAAGTCGGAAAGTTTCACATGGCCCTTGCTGTCCAAGAGAAGGTTATCCCAGCTGGTGAATaGAGTCTATGGCTAATACTG | + |
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Preference number: 2 (lower is better) Translates to: AKAKVGKFHMALAVQEKVIPAGE*SLWLIL Trigger: CAGTATTAGCCATAGACTCCATTCACCAGCTGGGAT...AACCTTCTCTTGGACAGCAAGGGCCATGTGAAACTTTCCGACTTTGGCCTTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233329.2 ENSMUST00000233510.2 ENSMUST00000233606.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGCCAAAGTCGGAAAGTTTCACATGGCCCTTGCTGTCCAAGAGAAGGTTGTCATCCCAGCTGGTGAATaGAGTCTATGGCTAATACTG | + |
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Preference number: 2 (lower is better) Translates to: KAKVGKFHMALAVQEKVVIPAGE*SLWLIL Trigger: CAGTATTAGCCATAGACTCCATTCACCAGCTGGGAT...GACAACCTTCTCTTGGACAGCAAGGGCCATGTGAAACTTTCCGACTTTGGCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233329.2 ENSMUST00000233510.2 ENSMUST00000233606.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCTCCCATGCTCACCACACACTCCTGCAAACACACGGGGATCGAGCCTCAACACCAAAGTCATTATATaGAACCTCCACATTTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: ILPCSPHTPANTRGSSLNTKVII*NLHIFL Trigger: CAGAAAAATGTGGAGGTTCCATATAATGACTTTGGT...GTTGAGGCTCGATCCCCGTGTGTTTGCAGGAGTGTGTGGTGAGCATGGGAGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
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| 3UTR-3UTR TCA 90 bp | TCAACTGTTTTATCAATAGAACACAAAGCCACGCCCAGGCCCTTCTATCTCCTTATTCAGTGTTTCTCATaGGAGAACGCCACAGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: STVLSIEHKATPRPFYLLIQCFS*ENATAE Trigger: CTCTGCTGTGGCGTTCTCTCATGAGAAACACTGAAT...AAGGAGATAGAAGGGCCTGGGCGTGGCTTTGTGTTCTATTGATAAAACAGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000156732.3 |
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| 3UTR-3UTR TCA 90 bp | TGCTCCTTCTCGAGCATGTCTGCTTTGCGCAGGATTTTCATTGCGTACACATGCATGCTCCTCGGCCTATaGCTTTTAAAGACTCAAAAT | + |
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Preference number: 2 (lower is better) Translates to: CSFSSMSALRRIFIAYTCMLLGL*LLKTQN Trigger: ATTTTGAGTCTTTAAAAGTCATAGGCCGAGGAGCAT...GCATGTGTACGCAATGAAAATCCTGCGCAAAGCAGACATGCTCGAGAAGGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233329.2 |
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| 3UTR-3UTR GCA 90 bp | GAACCTCCACATTTTTCTGACACAGCGAAAAATCTTCTAAAGGTGGCAGCAGCCTGGCCGATGGAAAAATaGTTGTCTCTGTCCTATCAG | + |
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Preference number: 2 (lower is better) Translates to: EPPHFSDTAKNLLKVAAAWPMEK*LSLSYQ Trigger: CTGATAGGACAGAGACAAGCATTTTTCCATCGGCCA...GGCTGCTGCCACCTTTAGAAGATTTTTCGCTGTGTCAGAAAAATGTGGAGGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
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| 3UTR-3UTR GCA 90 bp | GAAATATCAAGACAAACACGGTTGCACCATGGATTGAGGAATGAGCTCAAGGACCGAGATTGTTCCTTCTaGCACACTGTTGGCTGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: EISRQTRLHHGLRNELKDRDCSF*HTVGCS Trigger: TGAACAGCCAACAGTGTGGCAGAAGGAACAATCTCG...GTCCTTGAGCTCATTCCTCAATCCATGGTGCAACCGTGTTTGTCTTGATATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| 3UTR-3UTR CCA 90 bp | TCAAGACAAACACGGTTGCACCATGGATTGAGGAATGAGCTCAAGGACCCAGCGATTCTACAAACTTCTTaGAAGTTCTTTCAAGAGCGC | + |
|
Preference number: 2 (lower is better) Translates to: SRQTRLHHGLRNELKDPAILQTS*KFFQER Trigger: GCGCTCTTGAAAGAACTTCCAAGAAGTTTGTAGAAT...CGCTGGGTCCTTGAGCTCATTCCTCAATCCATGGTGCAACCGTGTTTGTCTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| 3UTR-3UTR CCA 90 bp | GCAGTGCCCAGTGCCTTTATGGGCTTTCTAAGATCAAAAAGGATCACACTAGTAAAGGAGAAAAATACTTaGTGGGCTTGGCAGGTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: AVPSAFMGFLRSKRITLVKEKNT*WAWQVA Trigger: TGCCACCTGCCAAGCCCACCAAGTATTTTTCTCCTT...TACTAGTGTGATCCTTTTTGATCTTAGAAAGCCCATAAAGGCACTGGGCACTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTCTGAAAAGTGAAATCACTGGGCAGGCTGTGGTTCAGGTTCCTATAAAATTCATGAATCCCAGCTGGTaGATGGAGTCTATGGCTAAT | + |
|
Preference number: 2 (lower is better) Translates to: VLKSEITGQAVVQVPIKFMNPSW*MESMAN Trigger: ATTAGCCATAGACTCCATTCACCAGCTGGGATTCAT...GAATTTTATAGGAACCTGAACCACAGCCTGCCCAGTGATTTCACTTTTCAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000233329.2 ENSMUST00000233510.2 ENSMUST00000233606.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTGAATGGAGTCTATGGCTAATACTGTCTCTGCTATATAAAACTGAGTCTCCTGTAGAGAAGGCTAGCTaGCGTCTGTTTCTTTTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: GEWSLWLILSLLYKTESPVEKAS*RLFLFQ Trigger: CTGGAAAAGAAACAGACGCCAGCTAGCCTTCTCTAC...AGGAGACTCAGTTTTATATAGCAGAGACAGTATTAGCCATAGACTCCATTCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000233329.2 ENSMUST00000233510.2 ENSMUST00000233606.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTGAATGGAGTCTATGGCTAATACTGTCTCTGCTATATAAAACTGAGTCTCCTATCCCAGCTGGTGAATaGAGTCTATGGCTAATACTG | + |
|
Preference number: 2 (lower is better) Translates to: GEWSLWLILSLLYKTESPIPAGE*SLWLIL Trigger: CAGTATTAGCCATAGACTCCATTCACCAGCTGGGAT...AGGAGACTCAGTTTTATATAGCAGAGACAGTATTAGCCATAGACTCCATTCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000233329.2 ENSMUST00000233510.2 ENSMUST00000233606.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCATTCTGATCAACTTGGGGAAATCAAATTCTCTTTACAGCACATACCAAACTTGGCCGATGGAAAAATaGTTGTCTCTGTCCTATCAG | + |
|
Preference number: 2 (lower is better) Translates to: FILINLGKSNSLYSTYQTWPMEK*LSLSYQ Trigger: CTGATAGGACAGAGACAAGCATTTTTCCATCGGCCA...AGTTTGGTATGTGCTGTAAAGAGAATTTGATTTCCCCAAGTTGATCAGAATGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGAACGCCACAGCAGAGGCGTATCAGCCCAAGCTGCAGGCAACCCTTTTGGGGAGGCTGTGGGCACTaGCATGGCAGCACTTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: ERTPQQRRISPSCRQPFWGGCGH*HGSTCR Trigger: CCTGCAAGTGCTGCCATGCAAGTGCCCACAGCCTCC...CCAAAAGGGTTGCCTGCAGCTTGGGCTGATACGCCTCTGCTGTGGCGTTCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000156732.3 |
||
| 3UTR CCA 72 bp | CATGGATTGAGGAATGAGCTCAAGGACCCAGCGGGCTaGTCCTGCCTTGACTCCCAAGGAGGCTGTGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: HGLRNELKDPAG*SCLDSQGGCGH Trigger: GTGCCCACAGCCTCCTTGGGAGTCAAGGCAGGACCAGCCCGCTGGGTCCTTGAGCTCATTCCTCAATCCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000156732.3 |
||
| 3UTR GCA 72 bp | TTGAGGAATGAGCTCAAGGACCCAGCGGGCTGGTCCTaGCTTGACTCCCAAGGAGGCTGTGGGCACTTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: LRNELKDPAGWS*LDSQGGCGHLH Trigger: ATGCAAGTGCCCACAGCCTCCTTGGGAGTCAAGGCAGGACCAGCCCGCTGGGTCCTTGAGCTCATTCCTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000156732.3 |
||
| 3UTR GCA 72 bp | GTGAGGGCCAAGGTATGGGGAGAAACCACCGGCACCTaGGAGACCGAGATTGTTCCTTCTGCCACACTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: VRAKVWGETTGT*ETEIVPSATLL Trigger: CAACAGTGTGGCAGAAGGAACAATCTCGGTCTCGCAGGTGCCGGTGGTTTCTCCCCATACCTTGGCCCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| 3UTR GCA 72 bp | TCCCAAGGAGGCTGTGGGCACTTGCATGGCAGCACTTaGAGGTATTGCTTGCTGGTAGGCAGTGTGTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SQGGCGHLHGST*RYCLLVGSVCL Trigger: GAGGCACACACTGCCTACCAGCAAGCAATACCTGCAAGTGCTGCCATGCAAGTGCCCACAGCCTCCTTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000156732.3 |
||
| 3UTR GCA 72 bp | GAGAGAACGCCACAGCAGAGGCGTATCAGCCCAAGCTaGAGGCAACCCTTTTGGGTGGAGGGACAAGAATGC | + |
|
Preference number: 3 (lower is better) Translates to: ERTPQQRRISPS*RQPFWVEGQEC Trigger: GCATTCTTGTCCCTCCACCCAAAAGGGTTGCCTGCAGCTTGGGCTGATACGCCTCTGCTGTGGCGTTCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000156732.3 |
||
| 3UTR-3UTR CAA 90 bp | ATTCTCCCATGCTCACCACACACTCCTGCAAACACACGGGGATCGAGCCTCAACCCACAGCACAGGGCGTaGGCTGGTACTCAGTGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: ILPCSPHTPANTRGSSLNPQHRA*AGTQCV Trigger: TACACACTGAGTACCAGCCAACGCCCTGTGCTGTGG...GTTGAGGCTCGATCCCCGTGTGTTTGCAGGAGTGTGTGGTGAGCATGGGAGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| 3UTR GCA 72 bp | GGCTGTGGGCACTTGCATGGCAGCACTTGCAGGTATTaGTTGCTGGTAGGCAGTGTGTGCCTCAAGATGATC | + |
|
Preference number: 3 (lower is better) Translates to: GCGHLHGSTCRY*LLVGSVCLKMI Trigger: GATCATCTTGAGGCACACACTGCCTACCAGCAAGCAATACCTGCAAGTGCTGCCATGCAAGTGCCCACAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000156732.3 |
||
| 3UTR CCA 72 bp | TTCGGGACCAGCGGAGGGCCGATCCCAGTTGTAGCTTaGCCAATGACTGCAAGTTACCACACAGGTGCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: FGTSGGPIPVVA*PMTASYHTGAN Trigger: ATTTGCACCTGTGTGGTAACTTGCAGTCATTGGCCAAGCTACAACTGGGATCGGCCCTCCGCTGGTCCCGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000156732.3 |
||
| 3UTR CCA 72 bp | TCTGCCTCCACTAGAATGTCACGCTCCGCACGAATGTaGCCAACCTGCTCCTTCTCGAGCATGTCTGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SASTRMSRSARM*PTCSFSSMSAL Trigger: CAAAGCAGACATGCTCGAGAAGGAGCAGGTTGGCCACATTCGTGCGGAGCGTGACATTCTAGTGGAGGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233329.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCGCACGAATGTGGCCAACCTGCTCCTTCTCGAGCATGTCTGCTTTGCGCAGGCTGTCCAAGAGAAGGTaGTCTGGCTTGATATCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SARMWPTCSFSSMSALRRLSKRR*SGLISL Trigger: CAGAGATATCAAGCCAGACAACCTTCTCTTGGACAG...CCTGCGCAAAGCAGACATGCTCGAGAAGGAGCAGGTTGGCCACATTCGTGCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233329.2 |
||
| 3UTR GCA 72 bp | ACTAGAATGTCACGCTCCGCACGAATGTGGCCAACCTaGTCCTTCTCGAGCATGTCTGCTTTGCGCAGGATT | + |
|
Preference number: 3 (lower is better) Translates to: TRMSRSARMWPT*SFSSMSALRRI Trigger: AATCCTGCGCAAAGCAGACATGCTCGAGAAGGAGCAGGTTGGCCACATTCGTGCGGAGCGTGACATTCTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233329.2 |
||
| 3UTR GCA 72 bp | TGTGGCCAACCTGCTCCTTCTCGAGCATGTCTGCTTTaGGCAGGATTTTCATTGCGTACACATGCCCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: CGQPAPSRACLL*AGFSLRTHALC Trigger: ACACAGGGCATGTGTACGCAATGAAAATCCTGCGCAAAGCAGACATGCTCGAGAAGGAGCAGGTTGGCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233329.2 |
||
| 3UTR CCA 72 bp | GCTATAAGGAGAAAAATACTTGGTGGGCTTGGCAGGTaGCATATCATCACCACAGCACAGGGCGTTGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: AIRRKILGGLGR*HIITTAQGVGW Trigger: CCAGCCAACGCCCTGTGCTGTGGTGATGATATGCCACCTGCCAAGCCCACCAAGTATTTTTCTCCTTATAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTCCACAGGGTCCAGAACTCCTTGGCAGTGCCCAGTGCCTTTATGGGCTTTCTAGGAAAACCACAATGTaGTATAGAGACCACTGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: CPQGPELLGSAQCLYGLSRKTTM*YRDHCP Trigger: GGGGCAGTGGTCTCTATACAACATTGTGGTTTTCCT...AGAAAGCCCATAAAGGCACTGGGCACTGCCAAGGAGTTCTGGACCCTGTGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGAGTGCCCACTGTAGAGAAGGCTAGCTGGCGTCTGTTTCTTTTCCAGGTCCTGTCCAAGAGAAGGTaGTCTGGCTTGATATCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SGVPTVEKASWRLFLFQVLSKRR*SGLISL Trigger: CAGAGATATCAAGCCAGACAACCTTCTCTTGGACAG...GACCTGGAAAAGAAACAGACGCCAGCTAGCCTTCTCTACAGTGGGCACTCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000233329.2 ENSMUST00000233510.2 ENSMUST00000233606.2 |
||
| 3UTR TCA 72 bp | AGGAAATATCAAGACAAACACGGTTGCACCATGGATTaGGGAATGAGCTCAAGGACCCAGCGGGCTGGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: RKYQDKHGCTMD*GMSSRTQRAGP Trigger: AGGACCAGCCCGCTGGGTCCTTGAGCTCATTCCTCAATCCATGGTGCAACCGTGTTTGTCTTGATATTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000156732.3 |
||
| 3UTR GCA 72 bp | AAAGAAGCAAGCAGCTGCTTATGGCCGATGGAAAAATaGTTGTCTCTGTCCTATCAGCTTCCCGGTGCACCG | + |
|
Preference number: 3 (lower is better) Translates to: KEASSCLWPMEK*LSLSYQLPGAP Trigger: CGGTGCACCGGGAAGCTGATAGGACAGAGACAAGCATTTTTCCATCGGCCATAAGCAGCTGCTTGCTTCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| 3UTR GCA 72 bp | AACCACCGGCACCTGCGAGACCGAGATTGTTCCTTCTaGCACACTGTTGGCTGTTCACACAGACTTTCATTA | + |
|
Preference number: 3 (lower is better) Translates to: NHRHLRDRDCSF*HTVGCSHRLSL Trigger: TAATGAAAGTCTGTGTGAACAGCCAACAGTGTGGCAGAAGGAACAATCTCGGTCTCGCAGGTGCCGGTGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| 3UTR-3UTR CAA 90 bp | CATCAACAGAAGAGCAGCATGAGTCTTTTGGATGGGAGACAGGTCAGTAGATCACCTGCGAGACCGAGATaGTTCCTTCTGCCACACTGT | + |
|
Preference number: 3 (lower is better) Translates to: HQQKSSMSLLDGRQVSRSPARPR*FLLPHC Trigger: ACAGTGTGGCAGAAGGAACAATCTCGGTCTCGCAGG...TGATCTACTGACCTGTCTCCCATCCAAAAGACTCATGCTGCTCTTCTGTTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| 3UTR TCA 72 bp | GAAACTCTGTTTCCTTCCGAGCGTGCGCGGATCTTCTaGGTCGTTTCTCTTCGTCTTTCAGGCCTTCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: ETLFPSERARIF*VVSLRLSGLLL Trigger: AAGAAGAAGGCCTGAAAGACGAAGAGAAACGACTCAGAAGATCCGCGCACGCTCGGAAGGAAACAGAGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233329.2 |
||
| 3UTR TCA 72 bp | ATTTTCATTGCGTACACATGCCCTGTGTCTTTCTTCTaGACAAGCCGCACCTCACCAAATGCTCCTCGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: IFIAYTCPVSFF*TSRTSPNAPRP Trigger: AGGCCGAGGAGCATTTGGTGAGGTGCGGCTTGTTCAGAAGAAAGACACAGGGCATGTGTACGCAATGAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233329.2 |
||
| 3UTR GCA 72 bp | AGCACTTGCAGGTATTGCTTGCTGGTAGGCAGTGTGTaGCTCAAGATGATCTACAGCCGTGAAGGGAAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: STCRYCLLVGSV*LKMIYSREGKV Trigger: TACTTTCCCTTCACGGCTGTAGATCATCTTGAGGCACACACTGCCTACCAGCAAGCAATACCTGCAAGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000156732.3 ENSMUST00000232836.2 |
||
| 3UTR CCA 72 bp | GGGCTTCAAAAGAAGCAAGCAGCTGCTTATGGCCGATaGAAAAATGCTTGTCTCTGTCCTATCAGCTTCCCG | + |
|
Preference number: 3 (lower is better) Translates to: GLQKKQAAAYGR*KNACLCPISFP Trigger: CGGGAAGCTGATAGGACAGAGACAAGCATTTTTCCATCGGCCATAAGCAGCTGCTTGCTTCTTTTGAAGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| 3UTR CCA 72 bp | TTTCACATGGCCCTTGCTGTCCAAGAGAAGGTTGTCTaGCTTGATATCTCTGTGGATGAATCCCAGCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: FHMALAVQEKVV*LDISVDESQLV Trigger: CACCAGCTGGGATTCATCCACAGAGATATCAAGCCAGACAACCTTCTCTTGGACAGCAAGGGCCATGTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233329.2 ENSMUST00000233510.2 ENSMUST00000233606.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAACTGTTTTATCAATAGAACACAAAGCCACGCCCAGGCCCTTCTATCTCCTTCCTGCGAGACCGAGATaGTTCCTTCTGCCACACTGT | + |
|
Preference number: 3 (lower is better) Translates to: STVLSIEHKATPRPFYLLPARPR*FLLPHC Trigger: ACAGTGTGGCAGAAGGAACAATCTCGGTCTCGCAGG...AAGGAGATAGAAGGGCCTGGGCGTGGCTTTGTGTTCTATTGATAAAACAGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| 3UTR TCA 72 bp | CACACTAGTACCTCTCCCATCAACAGAAGAGCAGCATaGGTCTTTTGGATGGGAGACAGGTCAGTAGATCAG | + |
|
Preference number: 3 (lower is better) Translates to: HTSTSPINRRAA*VFWMGDRSVDQ Trigger: CTGATCTACTGACCTGTCTCCCATCCAAAAGACTCATGCTGCTCTTCTGTTGATGGGAGAGGTACTAGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAAAGGCCAAAGTCGGAAAGTTTCACATGGCCCTTGCTGTCCAAGAGAAGGTTCAGTTCATCACTTTCTaGTATGTCTCTTGTGGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: AKAKVGKFHMALAVQEKVQFITF*YVSCGV Trigger: GACCCCACAAGAGACATACAAGAAAGTGATGAACTG...AACCTTCTCTTGGACAGCAAGGGCCATGTGAAACTTTCCGACTTTGGCCTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233606.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAATATCAAGACAAACACGGTTGCACCATGGATTGAGGAATGAGCTCAAGGACAGCAGCATGAGTCTTTaGGATGGGAGACAGGTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: EISRQTRLHHGLRNELKDSSMSL*DGRQVS Trigger: ACTGACCTGTCTCCCATCCAAAAGACTCATGCTGCT...GTCCTTGAGCTCATTCCTCAATCCATGGTGCAACCGTGTTTGTCTTGATATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| 3UTR GCA 72 bp | CTCTTTAATCGAAGAAACTCTGTTTCCTTCCGAGCGTaGGCGGATCTTCTGAGTCGTTTCTCTTCGTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LFNRRNSVSFRA*ADLLSRFSSSF Trigger: GAAAGACGAAGAGAAACGACTCAGAAGATCCGCGCACGCTCGGAAGGAAACAGAGTTTCTTCGATTAAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233329.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGTGCCCAGTGCCTTTATGGGCTTTCTAAGATCAAAAAGGATCACACTAGTAAGGAAAACCACAATGTaGTATAGAGACCACTGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: AVPSAFMGFLRSKRITLVRKTTM*YRDHCP Trigger: GGGGCAGTGGTCTCTATACAACATTGTGGTTTTCCT...TACTAGTGTGATCCTTTTTGATCTTAGAAAGCCCATAAAGGCACTGGGCACTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| 3UTR CCA 72 bp | TCAAATTCTCTTTACAGCACATACCAAACTGGCTCATaGGGCTTCAAAAGAAGCAAGCAGCTGCTTATGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SNSLYSTYQTGS*GFKRSKQLLMA Trigger: GGCCATAAGCAGCTGCTTGCTTCTTTTGAAGCCCCATGAGCCAGTTTGGTATGTGCTGTAAAGAGAATTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| 3UTR CCA 72 bp | CCTGCGAGACCGAGATTGTTCCTTCTGCCACACTGTTaGCTGTTCACACAGACTTTCATTATTGCCTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: PARPRLFLLPHC*LFTQTFIIALF Trigger: AAATAAGGCAATAATGAAAGTCTGTGTGAACAGCCAACAGTGTGGCAGAAGGAACAATCTCGGTCTCGCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGTTCCTTCTGCCACACTGTTGGCTGTTCACACAGACTTTCATTATTGCCTTAAGGAAAACCACAATGTaGTATAGAGACCACTGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: LFLLPHCWLFTQTFIIALRKTTM*YRDHCP Trigger: GGGGCAGTGGTCTCTATACAACATTGTGGTTTTCCT...TAAGGCAATAATGAAAGTCTGTGTGAACAGCCAACAGTGTGGCAGAAGGAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGCTATAAGGAGAAAAATACTTGGTGGGCTTGGCAGGTGGCATATCATCACCCGATGGAAAAATGCTaGTCTCTGTCCTATCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: FSYKEKNTWWAWQVAYHHPMEKC*SLSYQL Trigger: AAGCTGATAGGACAGAGACAAGCATTTTTCCATCGG...GTGATGATATGCCACCTGCCAAGCCCACCAAGTATTTTTCTCCTTATAGCTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| 3UTR TCA 72 bp | TCTGGCTTGATATCTCTGTGGATGAATCCCAGCTGGTaGATGGAGTCTATGGCTAATACTGTCTCTGCTATA | + |
|
Preference number: 3 (lower is better) Translates to: SGLISLWMNPSW*MESMANTVSAI Trigger: TATAGCAGAGACAGTATTAGCCATAGACTCCATTCACCAGCTGGGATTCATCCACAGAGATATCAAGCCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233329.2 ENSMUST00000233510.2 ENSMUST00000233606.2 |
||
| 3UTR CAA 72 bp | GGAATGAGCTCAAGGACCCAGCGGGCTGGTCCTGCCTaGACTCCCAAGGAGGCTGTGGGCACTTGCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GMSSRTQRAGPA*TPKEAVGTCMA Trigger: TGCCATGCAAGTGCCCACAGCCTCCTTGGGAGTCAAGGCAGGACCAGCCCGCTGGGTCCTTGAGCTCATTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000156732.3 |
||
| CDS-3UTR CCA 90 bp | CCACCGGCACCTGCGAGACCGAGATTGTTCCTTCTGCCACACTGTTGGCTGTTCGGTCTCGGAGCAGAATaGTGGGTAGCCGATGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PPAPARPRLFLLPHCWLFGLGAE*WVADEH Trigger: ATGCTCATCGGCTACCCACCATTCTGCTCCGAGACC...GAACAGCCAACAGTGTGGCAGAAGGAACAATCTCGGTCTCGCAGGTGCCGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| 3UTR CAA 72 bp | CTCCCAAGGAGGCTGTGGGCACTTGCATGGCAGCACTaGCAGGTATTGCTTGCTGGTAGGCAGTGTGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPRRLWALAWQH*QVLLAGRQCVP Trigger: AGGCACACACTGCCTACCAGCAAGCAATACCTGCAAGTGCTGCCATGCAAGTGCCCACAGCCTCCTTGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000156732.3 |
||
| CDS-3UTR GCA 90 bp | CAAACACGGTTGCACCATGGATTGAGGAATGAGCTCAAGGACCCAGCGGGCTGGGTTTCCTTCCGAGCGTaGGCGGATCTTCTGAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: QTRLHHGLRNELKDPAGWVSFRA*ADLLSR Trigger: ACGACTCAGAAGATCCGCGCACGCTCGGAAGGAAAC...CCAGCCCGCTGGGTCCTTGAGCTCATTCCTCAATCCATGGTGCAACCGTGTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| CDS-3UTR GCA 90 bp | AGGGAAAGTAAGGGTTGTCCACAGGGTCCAGAACTCCTTGGCAGTGCCCAGTGCGTTTCCTTCCGAGCGTaGGCGGATCTTCTGAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RESKGCPQGPELLGSAQCVSFRA*ADLLSR Trigger: ACGACTCAGAAGATCCGCGCACGCTCGGAAGGAAAC...GCACTGGGCACTGCCAAGGAGTTCTGGACCCTGTGGACAACCCTTACTTTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| 3UTR CAA 72 bp | TGGTCCTGCCTTGACTCCCAAGGAGGCTGTGGGCACTaGCATGGCAGCACTTGCAGGTATTGCTTGCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: WSCLDSQGGCGH*HGSTCRYCLLV Trigger: TACCAGCAAGCAATACCTGCAAGTGCTGCCATGCAAGTGCCCACAGCCTCCTTGGGAGTCAAGGCAGGACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000156732.3 |
||
| CDS-3UTR TCA 90 bp | ATTCTCCCATGCTCACCACACACTCCTGCAAACACACGGGGATCGAGCCTCAACCAGCTGGTCTCTCCCTaGTGTGTTCCCAGTCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: ILPCSPHTPANTRGSSLNQLVSP*CVPSQH Trigger: GTGTTGACTGGGAACACATCAGGGAGAGACCAGCTG...GTTGAGGCTCGATCCCCGTGTGTTTGCAGGAGTGTGTGGTGAGCATGGGAGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| CDS-3UTR GCA 90 bp | CACTTGCATGGCAGCACTTGCAGGTATTGCTTGCTGGTAGGCAGTGTGTGCCTCGTTTCCTTCCGAGCGTaGGCGGATCTTCTGAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: HLHGSTCRYCLLVGSVCLVSFRA*ADLLSR Trigger: ACGACTCAGAAGATCCGCGCACGCTCGGAAGGAAAC...GAGGCACACACTGCCTACCAGCAAGCAATACCTGCAAGTGCTGCCATGCAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| CDS-3UTR GCA 90 bp | AAGGTATGGGGAGAAACCACCGGCACCTGCGAGACCGAGATTGTTCCTTCTGCCCCGCACCTCACCAAATaGTCCTCGGCCTATGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: KVWGETTGTCETEIVPSAPHLTK*SSAYDF Trigger: AAAGTCATAGGCCGAGGAGCATTTGGTGAGGTGCGG...GGCAGAAGGAACAATCTCGGTCTCGCAGGTGCCGGTGGTTTCTCCCCATACCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR GCA 90 bp | CCACAGCAGAGGCGTATCAGCCCAAGCTGCAGGCAACCCTTTTGGGTGGAGGGACGAGCATGTCTGCTTTaGGCAGGATTTTCATTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PQQRRISPSCRQPFWVEGRACLL*AGFSLR Trigger: ACGCAATGAAAATCCTGCGCAAAGCAGACATGCTCG...TCCCTCCACCCAAAAGGGTTGCCTGCAGCTTGGGCTGATACGCCTCTGCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| CDS-3UTR CCA 90 bp | TTGACTCCCAAGGAGGCTGTGGGCACTTGCATGGCAGCACTTGCAGGTATTGCTGGTCTCGGAGCAGAATaGTGGGTAGCCGATGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LTPKEAVGTCMAALAGIAGLGAE*WVADEH Trigger: ATGCTCATCGGCTACCCACCATTCTGCTCCGAGACC...AGCAATACCTGCAAGTGCTGCCATGCAAGTGCCCACAGCCTCCTTGGGAGTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| CDS-3UTR CCA 90 bp | ACATACCAAACTGGCTCATGGGGCTTCAAAAGAAGCAAGCAGCTGCTTATGGCCCGCTCCGCACGAATGTaGCCAACCTGCTCCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TYQTGSWGFKRSKQLLMARSARM*PTCSFS Trigger: CGAGAAGGAGCAGGTTGGCCACATTCGTGCGGAGCG...GGCCATAAGCAGCTGCTTGCTTCTTTTGAAGCCCCATGAGCCAGTTTGGTATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| 3UTR CAA 72 bp | GAAGCAAGCAGCTGCTTATGGCCGATGGAAAAATGCTaGTCTCTGTCCTATCAGCTTCCCGGTGCACCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EASSCLWPMEKC*SLSYQLPGAPW Trigger: CCACGGTGCACCGGGAAGCTGATAGGACAGAGACAAGCATTTTTCCATCGGCCATAAGCAGCTGCTTGCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| 3UTR CAA 72 bp | AGGCTGTGGGCACTTGCATGGCAGCACTTGCAGGTATaGCTTGCTGGTAGGCAGTGTGTGCCTCAAGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: RLWALAWQHLQV*LAGRQCVPQDD Trigger: ATCATCTTGAGGCACACACTGCCTACCAGCAAGCAATACCTGCAAGTGCTGCCATGCAAGTGCCCACAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000156732.3 |
||
| CDS-3UTR TCA 90 bp | CCACCGGCACCTGCGAGACCGAGATTGTTCCTTCTGCCACACTGTTGGCTGTTCTCATGTTCTGAAAAGTaGAATCACTGGGCAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PPAPARPRLFLLPHCWLFSCSEK*NHWAGC Trigger: ACAGCCTGCCCAGTGATTTCACTTTTCAGAACATGA...GAACAGCCAACAGTGTGGCAGAAGGAACAATCTCGGTCTCGCAGGTGCCGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR TCA 90 bp | ATTCTCCCATGCTCACCACACACTCCTGCAAACACACGGGGATCGAGCCTCAACTGTAACCCGTCTGCATaGACACCTCTGGAGCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: ILPCSPHTPANTRGSSLNCNPSA*TPLEQC Trigger: ACATTGCTCCAGAGGTGTTCATGCAGACGGGTTACA...GTTGAGGCTCGATCCCCGTGTGTTTGCAGGAGTGTGTGGTGAGCATGGGAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| CDS-3UTR CCA 90 bp | CAAACACGGTTGCACCATGGATTGAGGAATGAGCTCAAGGACCCAGCGGGCTGGTCTCCAGTGTCACTTTaGTCATTGTCACCCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QTRLHHGLRNELKDPAGWSPVSL*SLSPSP Trigger: AGGAGAGGGTGACAATGACCAAAGTGACACTGGAGA...CCAGCCCGCTGGGTCCTTGAGCTCATTCCTCAATCCATGGTGCAACCGTGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| 3UTR CAA 72 bp | GGGAAAGTAAGGGTTGTCCACAGGGTCCAGAACTCCTaGGCAGTGCCCAGTGCCTTTATGGGCTTTCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GKVRVVHRVQNS*AVPSAFMGFLR Trigger: TCTTAGAAAGCCCATAAAGGCACTGGGCACTGCCAAGGAGTTCTGGACCCTGTGGACAACCCTTACTTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| 3UTR CAA 72 bp | TGTGGGCACTTGCATGGCAGCACTTGCAGGTATTGCTaGCTGGTAGGCAGTGTGTGCCTCAAGATGATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: CGHLHGSTCRYC*LVGSVCLKMIY Trigger: GTAGATCATCTTGAGGCACACACTGCCTACCAGCAAGCAATACCTGCAAGTGCTGCCATGCAAGTGCCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000156732.3 |
||
| 3UTR CAA 72 bp | ATGTGGCCAACCTGCTCCTTCTCGAGCATGTCTGCTTaGCGCAGGATTTTCATTGCGTACACATGCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: MWPTCSFSSMSA*RRIFIAYTCPV Trigger: CACAGGGCATGTGTACGCAATGAAAATCCTGCGCAAAGCAGACATGCTCGAGAAGGAGCAGGTTGGCCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233329.2 |
||
| CDS-3UTR CCA 90 bp | GGAGACAGGTCAGTAGATCAGGGTCTTTGTCCTAGTACCATAAGTAAAGTGCACCGCTCCGCACGAATGTaGCCAACCTGCTCCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GDRSVDQGLCPSTISKVHRSARM*PTCSFS Trigger: CGAGAAGGAGCAGGTTGGCCACATTCGTGCGGAGCG...GTGCACTTTACTTATGGTACTAGGACAAAGACCCTGATCTACTGACCTGTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CCA 90 bp | GGCACCTGCGAGACCGAGATTGTTCCTTCTGCCACACTGTTGGCTGTTCACACACTGCATGAACACCTCTaGAGCAATGTAGTCAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GTCETEIVPSATLLAVHTLHEHL*SNVVRS Trigger: ACTCCTGACTACATTGCTCCAGAGGTGTTCATGCAG...TGTGTGAACAGCCAACAGTGTGGCAGAAGGAACAATCTCGGTCTCGCAGGTGCC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CCA 90 bp | ACATACCAAACTGGCTCATGGGGCTTCAAAAGAAGCAAGCAGCTGCTTATGGCCGGTCTCGGAGCAGAATaGTGGGTAGCCGATGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TYQTGSWGFKRSKQLLMAGLGAE*WVADEH Trigger: ATGCTCATCGGCTACCCACCATTCTGCTCCGAGACC...GGCCATAAGCAGCTGCTTGCTTCTTTTGAAGCCCCATGAGCCAGTTTGGTATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTGACTCCCAAGGAGGCTGTGGGCACTTGCATGGCAGCACTTGCAGGTATTAATAGATATCGCAGCTaGTCTCTCCCTGATGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALTPKEAVGTCMAALAGINRYRS*SLPDVF Trigger: GAACACATCAGGGAGAGACCAGCTGCGATATCTATT...AATACCTGCAAGTGCTGCCATGCAAGTGCCCACAGCCTCCTTGGGAGTCAAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| CDS-3UTR TCA 90 bp | TTGGTGGGCTTGGCAGGTGGCATATCATCACCACAGCACAGGGCGTTGGCTGGTATGCTCCTCGGCCTATaGCTTTTAAAGACTCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LVGLAGGISSPQHRALAGMLLGL*LLKTQN Trigger: ATTTTGAGTCTTTAAAAGTCATAGGCCGAGGAGCAT...ACCAGCCAACGCCCTGTGCTGTGGTGATGATATGCCACCTGCCAAGCCCACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR TCA 90 bp | CATGGCAGCACTTGCAGGTATTGCTTGCTGGTAGGCAGTGTGTGCCTCAAGATGCAGGCAGGAACTCCATaGTTAGGTAGAGGTTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HGSTCRYCLLVGSVCLKMQAGTP*LGRGLA Trigger: AGCTAAACCTCTACCTAATCATGGAGTTCCTGCCTG...CATCTTGAGGCACACACTGCCTACCAGCAAGCAATACCTGCAAGTGCTGCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR TCA 90 bp | TTGACTCCCAAGGAGGCTGTGGGCACTTGCATGGCAGCACTTGCAGGTATTGCTATGAATCCCAGCTGGTaGATGGAGTCTATGGCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LTPKEAVGTCMAALAGIAMNPSW*MESMAN Trigger: ATTAGCCATAGACTCCATTCACCAGCTGGGATTCAT...AGCAATACCTGCAAGTGCTGCCATGCAAGTGCCCACAGCCTCCTTGGGAGTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| CDS-3UTR TCA 90 bp | ATTCTCCCATGCTCACCACACACTCCTGCAAACACACGGGGATCGAGCCTCAACATGAATCCCAGCTGGTaGATGGAGTCTATGGCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: ILPCSPHTPANTRGSSLNMNPSW*MESMAN Trigger: ATTAGCCATAGACTCCATTCACCAGCTGGGATTCAT...GTTGAGGCTCGATCCCCGTGTGTTTGCAGGAGTGTGTGGTGAGCATGGGAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| CDS-3UTR GCA 90 bp | GCATGGCAGCACTTGCAGGTATTGCTTGCTGGTAGGCAGTGTGTGCCTCAAGATCGAGCATGTCTGCTTTaGGCAGGATTTTCATTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: AWQHLQVLLAGRQCVPQDRACLL*AGFSLR Trigger: ACGCAATGAAAATCCTGCGCAAAGCAGACATGCTCG...ATCTTGAGGCACACACTGCCTACCAGCAAGCAATACCTGCAAGTGCTGCCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR GCA 90 bp | GGCACCTGCGAGACCGAGATTGTTCCTTCTGCCACACTGTTGGCTGTTCACACACTTCTCGAGCATGTCTaGTTTGCGCAGGATTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GTCETEIVPSATLLAVHTLLEHV*FAQDFH Trigger: ATGAAAATCCTGCGCAAAGCAGACATGCTCGAGAAG...TGTGTGAACAGCCAACAGTGTGGCAGAAGGAACAATCTCGGTCTCGCAGGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CCA 90 bp | GGCAAAATGGCTAAAGTTGGGGTAAGGAAATATCAAGACAAACACGGTTGCACCCGCTCCGCACGAATGTaGCCAACCTGCTCCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GKMAKVGVRKYQDKHGCTRSARM*PTCSFS Trigger: CGAGAAGGAGCAGGTTGGCCACATTCGTGCGGAGCG...GGTGCAACCGTGTTTGTCTTGATATTTCCTTACCCCAACTTTAGCCATTTTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| CDS-3UTR CCA 90 bp | TGTCCACAGGGTCCAGAACTCCTTGGCAGTGCCCAGTGCCTTTATGGGCTTTCTATCCCAGCTGGTGAATaGAGTCTATGGCTAATACTG | + |
|
Preference number: 4 (lower is better) Translates to: CPQGPELLGSAQCLYGLSIPAGE*SLWLIL Trigger: CAGTATTAGCCATAGACTCCATTCACCAGCTGGGAT...AGAAAGCCCATAAAGGCACTGGGCACTGCCAAGGAGTTCTGGACCCTGTGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CCA 90 bp | CATGGCAGCACTTGCAGGTATTGCTTGCTGGTAGGCAGTGTGTGCCTCAAGATGGTAGAGAAGGCTAGCTaGCGTCTGTTTCTTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HGSTCRYCLLVGSVCLKMVEKAS*RLFLFQ Trigger: CTGGAAAAGAAACAGACGCCAGCTAGCCTTCTCTAC...CATCTTGAGGCACACACTGCCTACCAGCAAGCAATACCTGCAAGTGCTGCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR TCA 90 bp | AGGTATGGGGAGAAACCACCGGCACCTGCGAGACCGAGATTGTTCCTTCTGCCAATGCTCCTCGGCCTATaGCTTTTAAAGACTCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RYGEKPPAPARPRLFLLPMLLGL*LLKTQN Trigger: ATTTTGAGTCTTTAAAAGTCATAGGCCGAGGAGCAT...TGGCAGAAGGAACAATCTCGGTCTCGCAGGTGCCGGTGGTTTCTCCCCATACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR TCA 90 bp | ATCAGCTTCCCGGTGCACCGTGGAGGAATATCCACTTACAATCACATTTCAGAGCCTGTGTCTTTCTTCTaGACAAGCCGCACCTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: ISFPVHRGGISTYNHISEPVSFF*TSRTSP Trigger: TGGTGAGGTGCGGCTTGTTCAGAAGAAAGACACAGG...CTCTGAAATGTGATTGTAAGTGGATATTCCTCCACGGTGCACCGGGAAGCTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR TCA 90 bp | TCAAGACAAACACGGTTGCACCATGGATTGAGGAATGAGCTCAAGGACCCAGCGCAGGCAGGAACTCCATaGTTAGGTAGAGGTTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRQTRLHHGLRNELKDPAQAGTP*LGRGLA Trigger: AGCTAAACCTCTACCTAATCATGGAGTTCCTGCCTG...CGCTGGGTCCTTGAGCTCATTCCTCAATCCATGGTGCAACCGTGTTTGTCTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| CDS-3UTR TCA 90 bp | TACAGCCGTGAAGGGAAAGTAAGGGTTGTCCACAGGGTCCAGAACTCCTTGGCATCATGTTCTGAAAAGTaGAATCACTGGGCAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YSREGKVRVVHRVQNSLASCSEK*NHWAGC Trigger: ACAGCCTGCCCAGTGATTTCACTTTTCAGAACATGA...TGCCAAGGAGTTCTGGACCCTGTGGACAACCCTTACTTTCCCTTCACGGCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR TCA 90 bp | CATCAACAGAAGAGCAGCATGAGTCTTTTGGATGGGAGACAGGTCAGTAGATCACAGCTGGTCTCTCCCTaGTGTGTTCCCAGTCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: HQQKSSMSLLDGRQVSRSQLVSP*CVPSQH Trigger: GTGTTGACTGGGAACACATCAGGGAGAGACCAGCTG...TGATCTACTGACCTGTCTCCCATCCAAAAGACTCATGCTGCTCTTCTGTTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR TCA 90 bp | ACCCAGGACCAGAAGTCCCCCTCGGCATTCTGTTTTGTAAATATCACCCTAAAACAGCTGGTCTCTCCCTaGTGTGTTCCCAGTCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: TQDQKSPSAFCFVNITLKQLVSP*CVPSQH Trigger: GTGTTGACTGGGAACACATCAGGGAGAGACCAGCTG...TTTTAGGGTGATATTTACAAAACAGAATGCCGAGGGGGACTTCTGGTCCTGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000141431.8 |
||
| CDS-3UTR CCA 90 bp | GCATGGCAGCACTTGCAGGTATTGCTTGCTGGTAGGCAGTGTGTGCCTCAAGATATCCCAGCTGGTGAATaGAGTCTATGGCTAATACTG | + |
|
Preference number: 4 (lower is better) Translates to: AWQHLQVLLAGRQCVPQDIPAGE*SLWLIL Trigger: CAGTATTAGCCATAGACTCCATTCACCAGCTGGGAT...ATCTTGAGGCACACACTGCCTACCAGCAAGCAATACCTGCAAGTGCTGCCATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGACAAACACGGTTGCACCATGGATTGAGGAATGAGCTCAAGGACCCAGCGGTAGAGAAGGCTAGCTaGCGTCTGTTTCTTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRQTRLHHGLRNELKDPAVEKAS*RLFLFQ Trigger: CTGGAAAAGAAACAGACGCCAGCTAGCCTTCTCTAC...CGCTGGGTCCTTGAGCTCATTCCTCAATCCATGGTGCAACCGTGTTTGTCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| CDS-3UTR CCA 90 bp | ACCCAGGACCAGAAGTCCCCCTCGGCATTCTGTTTTGTAAATATCACCCTAAAAGGTCTCGGAGCAGAATaGTGGGTAGCCGATGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TQDQKSPSAFCFVNITLKGLGAE*WVADEH Trigger: ATGCTCATCGGCTACCCACCATTCTGCTCCGAGACC...TTTTAGGGTGATATTTACAAAACAGAATGCCGAGGGGGACTTCTGGTCCTGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000141431.8 |
||
| CDS-3UTR TCA 90 bp | GTCTGGCTTGATATCTCTGTGGATGAATCCCAGCTGGTGAATGGAGTCTATGGCCCTGTGTCTTTCTTCTaGACAAGCCGCACCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: VWLDISVDESQLVNGVYGPVSFF*TSRTSF Trigger: AAATGAGGTGCGGCTTGTTCAGAAGAAAGACACAGG...GCCATAGACTCCATTCACCAGCTGGGATTCATCCACAGAGATATCAAGCCAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233510.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGGCCAAAGTCGGAAAGTTTCACATGGCCCTTGCTGTCCAAGAGAAGGTTGCGAGCATGTCTGCTTTaGGCAGGATTTTCATTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: QRPKSESFTWPLLSKRRLRACLL*AGFSLR Trigger: ACGCAATGAAAATCCTGCGCAAAGCAGACATGCTCG...CAACCTTCTCTTGGACAGCAAGGGCCATGTGAAACTTTCCGACTTTGGCCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233606.2 |
||
| CDS-3UTR GCA 90 bp | TGTTCCCATTCACAGCAGAACCTCAGAATCAGGCCCTTGGCTTTCTCGGAGACACTTCTCGAGCATGTCTaGTTTGCGCAGGATTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CSHSQQNLRIRPLAFSETLLEHV*FAQDFH Trigger: ATGAAAATCCTGCGCAAAGCAGACATGCTCGAGAAG...TGTCTCCGAGAAAGCCAAGGGCCTGATTCTGAGGTTCTGCTGTGAATGGGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233606.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCAGGCCTGTGCAAAGGCCAAAGTCGGAAAGTTTCACATGGCCCTTGCTGTTCTCCAGTGTCACTTTaGTCATTGTCACCCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSGLCKGQSRKVSHGPCCSPVSL*SLSPSP Trigger: AGGAGAGGGTGACAATGACCAAAGTGACACTGGAGA...ACAGCAAGGGCCATGTGAAACTTTCCGACTTTGGCCTTTGCACAGGCCTGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000233329.2 ENSMUST00000233510.2 ENSMUST00000233606.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCCAAAGTCGGAAAGTTTCACATGGCCCTTGCTGTCCAAGAGAAGGTTGTCTCTCCAGTGTCACTTTaGTCATTGTCACCCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KAKVGKFHMALAVQEKVVSPVSL*SLSPSP Trigger: AGGAGAGGGTGACAATGACCAAAGTGACACTGGAGA...GACAACCTTCTCTTGGACAGCAAGGGCCATGTGAAACTTTCCGACTTTGGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233329.2 ENSMUST00000233510.2 ENSMUST00000233606.2 |
||
| CDS-3UTR CCA 90 bp | GTCTGGCTTGATATCTCTGTGGATGAATCCCAGCTGGTGAATGGAGTCTATGGCTCTCCAGTGTCACTTTaGTCATTGTCACCCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VWLDISVDESQLVNGVYGSPVSL*SLSPSP Trigger: AGGAGAGGGTGACAATGACCAAAGTGACACTGGAGA...GCCATAGACTCCATTCACCAGCTGGGATTCATCCACAGAGATATCAAGCCAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233329.2 ENSMUST00000233510.2 ENSMUST00000233606.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGACAAACACGGTTGCACCATGGATTGAGGAATGAGCTCAAGGACCCAGCGAATAGATATCGCAGCTaGTCTCTCCCTGATGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRQTRLHHGLRNELKDPANRYRS*SLPDVF Trigger: GAACACATCAGGGAGAGACCAGCTGCGATATCTATT...CGCTGGGTCCTTGAGCTCATTCCTCAATCCATGGTGCAACCGTGTTTGTCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| 3UTR CAA 72 bp | TACCTCTCCCATCAACAGAAGAGCAGCATGAGTCTTTaGGATGGGAGACAGGTCAGTAGATCAGGGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: YLSHQQKSSMSL*DGRQVSRSGSL Trigger: CAAAGACCCTGATCTACTGACCTGTCTCCCATCCAAAAGACTCATGCTGCTCTTCTGTTGATGGGAGAGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| 3UTR CAA 72 bp | GAAAGTTTCACATGGCCCTTGCTGTCCAAGAGAAGGTaGTCTGGCTTGATATCTCTGTGGATGAATCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ESFTWPLLSKRR*SGLISLWMNPS Trigger: GCTGGGATTCATCCACAGAGATATCAAGCCAGACAACCTTCTCTTGGACAGCAAGGGCCATGTGAAACTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233329.2 ENSMUST00000233510.2 ENSMUST00000233606.2 |
||
| CDS-3UTR TCA 90 bp | GAACCTCCACATTTTTCTGACACAGCGAAAAATCTTCTAAAGGTGGCAGCAGCCTGTAACCCGTCTGCATaGACACCTCTGGAGCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: EPPHFSDTAKNLLKVAAACNPSA*TPLEQC Trigger: ACATTGCTCCAGAGGTGTTCATGCAGACGGGTTACA...GGCTGCTGCCACCTTTAGAAGATTTTTCGCTGTGTCAGAAAAATGTGGAGGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| CDS-3UTR TCA 90 bp | ACCCAGGACCAGAAGTCCCCCTCGGCATTCTGTTTTGTAAATATCACCCTAAAATGTAACCCGTCTGCATaGACACCTCTGGAGCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: TQDQKSPSAFCFVNITLKCNPSA*TPLEQC Trigger: ACATTGCTCCAGAGGTGTTCATGCAGACGGGTTACA...TTTTAGGGTGATATTTACAAAACAGAATGCCGAGGGGGACTTCTGGTCCTGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000141431.8 |
||
| CDS-3UTR TCA 90 bp | ATTCTCCCATGCTCACCACACACTCCTGCAAACACACGGGGATCGAGCCTCAACAAATTCATCGAAGTTTaGGGTATCATCGATGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILPCSPHTPANTRGSSLNKFIEV*GIIDAL Trigger: AAGAGCATCGATGATACCTCAAACTTCGATGAATTT...GTTGAGGCTCGATCCCCGTGTGTTTGCAGGAGTGTGTGGTGAGCATGGGAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| CDS-3UTR GCA 90 bp | GTTCTGAAAAGTGAAATCACTGGGCAGGCTGTGGTTCAGGTTCCTATAAAATTCGTTTCCTTCCGAGCGTaGGCGGATCTTCTGAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: VLKSEITGQAVVQVPIKFVSFRA*ADLLSR Trigger: ACGACTCAGAAGATCCGCGCACGCTCGGAAGGAAAC...GAATTTTATAGGAACCTGAACCACAGCCTGCCCAGTGATTTCACTTTTCAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233606.2 |
||
| CDS-3UTR CCA 90 bp | CAGCACATACCAAACTGGCTCATGGGGCTTCAAAAGAAGCAAGCAGCTGCTTATCTGCATGAACACCTCTaGAGCAATGTAGTCAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QHIPNWLMGLQKKQAAAYLHEHL*SNVVRS Trigger: ACTCCTGACTACATTGCTCCAGAGGTGTTCATGCAG...ATAAGCAGCTGCTTGCTTCTTTTGAAGCCCCATGAGCCAGTTTGGTATGTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CCA 90 bp | GAACCTCCACATTTTTCTGACACAGCGAAAAATCTTCTAAAGGTGGCAGCAGCCCTTGTATGTCTCTTGTaGGGTCTCGGAGCAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: EPPHFSDTAKNLLKVAAALVCLL*GLGAEW Trigger: CCATTCTGCTCCGAGACCCCACAAGAGACATACAAG...GGCTGCTGCCACCTTTAGAAGATTTTTCGCTGTGTCAGAAAAATGTGGAGGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| CDS-3UTR CCA 90 bp | ACCCAGGACCAGAAGTCCCCCTCGGCATTCTGTTTTGTAAATATCACCCTAAAACTTGTATGTCTCTTGTaGGGTCTCGGAGCAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: TQDQKSPSAFCFVNITLKLVCLL*GLGAEW Trigger: CCATTCTGCTCCGAGACCCCACAAGAGACATACAAG...TTTTAGGGTGATATTTACAAAACAGAATGCCGAGGGGGACTTCTGGTCCTGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000141431.8 |
||
| CDS-3UTR CCA 90 bp | AGCGCAAGAGGAAAACCACAATGTTGTATAGAGACCACTGCCCCATTTAGGGTTCTTGTATGTCTCTTGTaGGGTCTCGGAGCAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SARGKPQCCIETTAPFRVLVCLL*GLGAEW Trigger: CCATTCTGCTCCGAGACCCCACAAGAGACATACAAG...AACCCTAAATGGGGCAGTGGTCTCTATACAACATTGTGGTTTTCCTCTTGCGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTTGGAAGTTCTTTCAAGAGCGCAAGAGGAAAACCACAATGTTGTATAGAGCAGCTGGTCTCTCCCTaGTGTGTTCCCAGTCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: LLGSSFKSARGKPQCCIEQLVSP*CVPSQH Trigger: GTGTTGACTGGGAACACATCAGGGAGAGACCAGCTG...CTCTATACAACATTGTGGTTTTCCTCTTGCGCTCTTGAAAGAACTTCCAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CCA 90 bp | GGAGACAGGTCAGTAGATCAGGGTCTTTGTCCTAGTACCATAAGTAAAGTGCACTCTCCAGTGTCACTTTaGTCATTGTCACCCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GDRSVDQGLCPSTISKVHSPVSL*SLSPSP Trigger: AGGAGAGGGTGACAATGACCAAAGTGACACTGGAGA...GTGCACTTTACTTATGGTACTAGGACAAAGACCCTGATCTACTGACCTGTCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CCA 90 bp | AGCGCAAGAGGAAAACCACAATGTTGTATAGAGACCACTGCCCCATTTAGGGTTTCTCCAGTGTCACTTTaGTCATTGTCACCCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SARGKPQCCIETTAPFRVSPVSL*SLSPSP Trigger: AGGAGAGGGTGACAATGACCAAAGTGACACTGGAGA...AACCCTAAATGGGGCAGTGGTCTCTATACAACATTGTGGTTTTCCTCTTGCGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CCA 90 bp | GGAGACAGGTCAGTAGATCAGGGTCTTTGTCCTAGTACCATAAGTAAAGTGCACGTAGAGAAGGCTAGCTaGCGTCTGTTTCTTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GDRSVDQGLCPSTISKVHVEKAS*RLFLFQ Trigger: CTGGAAAAGAAACAGACGCCAGCTAGCCTTCTCTAC...GTGCACTTTACTTATGGTACTAGGACAAAGACCCTGATCTACTGACCTGTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CCA 90 bp | ACCCAGGACCAGAAGTCCCCCTCGGCATTCTGTTTTGTAAATATCACCCTAAAAGTAGAGAAGGCTAGCTaGCGTCTGTTTCTTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TQDQKSPSAFCFVNITLKVEKAS*RLFLFQ Trigger: CTGGAAAAGAAACAGACGCCAGCTAGCCTTCTCTAC...TTTTAGGGTGATATTTACAAAACAGAATGCCGAGGGGGACTTCTGGTCCTGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000141431.8 |
||
| CDS-3UTR CCA 90 bp | CATCAACAGAAGAGCAGCATGAGTCTTTTGGATGGGAGACAGGTCAGTAGATCACTGCATGAACACCTCTaGAGCAATGTAGTCAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HQQKSSMSLLDGRQVSRSLHEHL*SNVVRS Trigger: ACTCCTGACTACATTGCTCCAGAGGTGTTCATGCAG...TGATCTACTGACCTGTCTCCCATCCAAAAGACTCATGCTGCTCTTCTGTTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CCA 90 bp | ACCCAGGACCAGAAGTCCCCCTCGGCATTCTGTTTTGTAAATATCACCCTAAAACTGCATGAACACCTCTaGAGCAATGTAGTCAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TQDQKSPSAFCFVNITLKLHEHL*SNVVRS Trigger: ACTCCTGACTACATTGCTCCAGAGGTGTTCATGCAG...TTTTAGGGTGATATTTACAAAACAGAATGCCGAGGGGGACTTCTGGTCCTGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000141431.8 |
||
| CDS-3UTR CCA 90 bp | GAAATATCAAGACAAACACGGTTGCACCATGGATTGAGGAATGAGCTCAAGGACCTTGTATGTCTCTTGTaGGGTCTCGGAGCAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: EISRQTRLHHGLRNELKDLVCLL*GLGAEW Trigger: CCATTCTGCTCCGAGACCCCACAAGAGACATACAAG...GTCCTTGAGCTCATTCCTCAATCCATGGTGCAACCGTGTTTGTCTTGATATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| CDS-3UTR TCA 90 bp | CAAAGGCCAAAGTCGGAAAGTTTCACATGGCCCTTGCTGTCCAAGAGAAGGTTGATGCTCCTCGGCCTATaGCTTTTAAAGACTCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QRPKSESFTWPLLSKRRLMLLGL*LLKTQN Trigger: ATTTTGAGTCTTTAAAAGTCATAGGCCGAGGAGCAT...CAACCTTCTCTTGGACAGCAAGGGCCATGTGAAACTTTCCGACTTTGGCCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233606.2 |
||
| CDS-3UTR TCA 90 bp | TTTTCTGACACAGCGAAAAATCTTCTAAAGGTGGCAGCAGCCATGACAGAGAAGCAGGCAGGAACTCCATaGTTAGGTAGAGGTTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSDTAKNLLKVAAAMTEKQAGTP*LGRGLA Trigger: AGCTAAACCTCTACCTAATCATGGAGTTCCTGCCTG...CTTCTCTGTCATGGCTGCTGCCACCTTTAGAAGATTTTTCGCTGTGTCAGAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| CDS-3UTR TCA 90 bp | ACCCAGGACCAGAAGTCCCCCTCGGCATTCTGTTTTGTAAATATCACCCTAAAAATGAATCCCAGCTGGTaGATGGAGTCTATGGCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: TQDQKSPSAFCFVNITLKMNPSW*MESMAN Trigger: ATTAGCCATAGACTCCATTCACCAGCTGGGATTCAT...TTTTAGGGTGATATTTACAAAACAGAATGCCGAGGGGGACTTCTGGTCCTGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000141431.8 |
||
| CDS-3UTR TCA 90 bp | GAACCTCCACATTTTTCTGACACAGCGAAAAATCTTCTAAAGGTGGCAGCAGCCTCATGTTCTGAAAAGTaGAATCACTGGGCAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EPPHFSDTAKNLLKVAAASCSEK*NHWAGC Trigger: ACAGCCTGCCCAGTGATTTCACTTTTCAGAACATGA...GGCTGCTGCCACCTTTAGAAGATTTTTCGCTGTGTCAGAAAAATGTGGAGGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| CDS-3UTR TCA 90 bp | ACCCAGGACCAGAAGTCCCCCTCGGCATTCTGTTTTGTAAATATCACCCTAAAATCATGTTCTGAAAAGTaGAATCACTGGGCAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TQDQKSPSAFCFVNITLKSCSEK*NHWAGC Trigger: ACAGCCTGCCCAGTGATTTCACTTTTCAGAACATGA...TTTTAGGGTGATATTTACAAAACAGAATGCCGAGGGGGACTTCTGGTCCTGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000141431.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGGCTTGATATCTCTGTGGATGAATCCCAGCTGGTGAATGGAGTCTATGGCTCGTATGATTACTCATaGATGAGCAAGGTGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: VWLDISVDESQLVNGVYGSYDYS*MSKVLI Trigger: GATCAACACCTTGCTCATCCATGAGTAATCATACGA...GCCATAGACTCCATTCACCAGCTGGGATTCATCCACAGAGATATCAAGCCAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233329.2 ENSMUST00000233510.2 ENSMUST00000233606.2 |
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| CDS-3UTR CCA 90 bp | ACCCAGGACCAGAAGTCCCCCTCGGCATTCTGTTTTGTAAATATCACCCTAAAAATCCCAGCTGGTGAATaGAGTCTATGGCTAATACTG | + |
|
Preference number: 4 (lower is better) Translates to: TQDQKSPSAFCFVNITLKIPAGE*SLWLIL Trigger: CAGTATTAGCCATAGACTCCATTCACCAGCTGGGAT...TTTTAGGGTGATATTTACAAAACAGAATGCCGAGGGGGACTTCTGGTCCTGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000141431.8 |
||
| CDS-3UTR CCA 90 bp | ACCCAGGACCAGAAGTCCCCCTCGGCATTCTGTTTTGTAAATATCACCCTAAAAAATAGATATCGCAGCTaGTCTCTCCCTGATGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TQDQKSPSAFCFVNITLKNRYRS*SLPDVF Trigger: GAACACATCAGGGAGAGACCAGCTGCGATATCTATT...TTTTAGGGTGATATTTACAAAACAGAATGCCGAGGGGGACTTCTGGTCCTGGGT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000141431.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTTGGAAGTTCTTTCAAGAGCGCAAGAGGAAAACCACAATGTTGTATAGAGTGTAACCCGTCTGCATaGACACCTCTGGAGCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LLGSSFKSARGKPQCCIECNPSA*TPLEQC Trigger: ACATTGCTCCAGAGGTGTTCATGCAGACGGGTTACA...CTCTATACAACATTGTGGTTTTCCTCTTGCGCTCTTGAAAGAACTTCCAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR TCA 90 bp | ACATACCAAACTGGCTCATGGGGCTTCAAAAGAAGCAAGCAGCTGCTTATGGCCAAATTCATCGAAGTTTaGGGTATCATCGATGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TYQTGSWGFKRSKQLLMAKFIEV*GIIDAL Trigger: AAGAGCATCGATGATACCTCAAACTTCGATGAATTT...GGCCATAAGCAGCTGCTTGCTTCTTTTGAAGCCCCATGAGCCAGTTTGGTATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CCA 90 bp | TTTCAAGAGCGCAAGAGGAAAACCACAATGTTGTATAGAGACCACTGCCCCATTATCCCAGCTGGTGAATaGAGTCTATGGCTAATACTG | + |
|
Preference number: 4 (lower is better) Translates to: FQERKRKTTMLYRDHCPIIPAGE*SLWLIL Trigger: CAGTATTAGCCATAGACTCCATTCACCAGCTGGGAT...AATGGGGCAGTGGTCTCTATACAACATTGTGGTTTTCCTCTTGCGCTCTTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CCA 90 bp | AGCGCAAGAGGAAAACCACAATGTTGTATAGAGACCACTGCCCCATTTAGGGTTTCGTATGATTACTCATaGATGAGCAAGGTGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: SARGKPQCCIETTAPFRVSYDYS*MSKVLI Trigger: GATCAACACCTTGCTCATCCATGAGTAATCATACGA...AACCCTAAATGGGGCAGTGGTCTCTATACAACATTGTGGTTTTCCTCTTGCGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTTTGTCTGAAAGTTAAAAGTGTTCACTGTCATAGCCGAGGACCAGTTCAGTCTCCAGTGTCACTTTaGTCATTGTCACCCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FFCLKVKSVHCHSRGPVQSPVSL*SLSPSP Trigger: AGGAGAGGGTGACAATGACCAAAGTGACACTGGAGA...CTGAACTGGTCCTCGGCTATGACAGTGAACACTTTTAACTTTCAGACAAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142366.3 ENSMUST00000233329.2 |
||
| CDS-3UTR TCA 90 bp | ACCCAGGACCAGAAGTCCCCCTCGGCATTCTGTTTTGTAAATATCACCCTAAAAAAATTCATCGAAGTTTaGGGTATCATCGATGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TQDQKSPSAFCFVNITLKKFIEV*GIIDAL Trigger: AAGAGCATCGATGATACCTCAAACTTCGATGAATTT...TTTTAGGGTGATATTTACAAAACAGAATGCCGAGGGGGACTTCTGGTCCTGGGT 42% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000141431.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTTGGAAGTTCTTTCAAGAGCGCAAGAGGAAAACCACAATGTTGTATAGAGCTTCTCGAGCATGTCTaGTTTGCGCAGGATTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLGSSFKSARGKPQCCIELLEHV*FAQDFH Trigger: ATGAAAATCCTGCGCAAAGCAGACATGCTCGAGAAG...CTCTATACAACATTGTGGTTTTCCTCTTGCGCTCTTGAAAGAACTTCCAAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CCA 90 bp | TTTCAAGAGCGCAAGAGGAAAACCACAATGTTGTATAGAGACCACTGCCCCATTTCGTATGATTACTCATaGATGAGCAAGGTGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: FQERKRKTTMLYRDHCPISYDYS*MSKVLI Trigger: GATCAACACCTTGCTCATCCATGAGTAATCATACGA...AATGGGGCAGTGGTCTCTATACAACATTGTGGTTTTCCTCTTGCGCTCTTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CCA 90 bp | GCAGTGCCCAGTGCCTTTATGGGCTTTCTAAGATCAAAAAGGATCACACTAGTATCGTATGATTACTCATaGATGAGCAAGGTGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: AVPSAFMGFLRSKRITLVSYDYS*MSKVLI Trigger: GATCAACACCTTGCTCATCCATGAGTAATCATACGA...TACTAGTGTGATCCTTTTTGATCTTAGAAAGCCCATAAAGGCACTGGGCACTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR TCA 90 bp | CATTCTGATCAACTTGGGGAAATCAAATTCTCTTTACAGCACATACCAAACTGGATGAATCCCAGCTGGTaGATGGAGTCTATGGCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: HSDQLGEIKFSLQHIPNWMNPSW*MESMAN Trigger: ATTAGCCATAGACTCCATTCACCAGCTGGGATTCAT...CCAGTTTGGTATGTGCTGTAAAGAGAATTTGATTTCCCCAAGTTGATCAGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CCA 90 bp | CATTCTGATCAACTTGGGGAAATCAAATTCTCTTTACAGCACATACCAAACTGGAATAGATATCGCAGCTaGTCTCTCCCTGATGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HSDQLGEIKFSLQHIPNWNRYRS*SLPDVF Trigger: GAACACATCAGGGAGAGACCAGCTGCGATATCTATT...CCAGTTTGGTATGTGCTGTAAAGAGAATTTGATTTCCCCAAGTTGATCAGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR GCA 90 bp | TTCATTCTGATCAACTTGGGGAAATCAAATTCTCTTTACAGCACATACCAAACTCGAGCATGTCTGCTTTaGGCAGGATTTTCATTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: FILINLGKSNSLYSTYQTRACLL*AGFSLR Trigger: ACGCAATGAAAATCCTGCGCAAAGCAGACATGCTCG...AGTTTGGTATGTGCTGTAAAGAGAATTTGATTTCCCCAAGTTGATCAGAATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR TCA 90 bp | CATTCTGATCAACTTGGGGAAATCAAATTCTCTTTACAGCACATACCAAACTGGATGCTCCTCGGCCTATaGCTTTTAAAGACTCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HSDQLGEIKFSLQHIPNWMLLGL*LLKTQN Trigger: ATTTTGAGTCTTTAAAAGTCATAGGCCGAGGAGCAT...CCAGTTTGGTATGTGCTGTAAAGAGAATTTGATTTCCCCAAGTTGATCAGAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR GCA 90 bp | GGCTGTTCACACAGACTTTCATTATTGCCTTATTTAACTACAGAATTTTCAGCTCTTCTCGAGCATGTCTaGTTTGCGCAGGATTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GCSHRLSLLPYLTTEFSALLEHV*FAQDFH Trigger: ATGAAAATCCTGCGCAAAGCAGACATGCTCGAGAAG...AGCTGAAAATTCTGTAGTTAAATAAGGCAATAATGAAAGTCTGTGTGAACAGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CCA 90 bp | AACTTCTTTTGTCTGAAAGTTAAAAGTGTTCACTGTCATAGCCGAGGACCAGTTTCGTATGATTACTCATaGATGAGCAAGGTGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: NFFCLKVKSVHCHSRGPVSYDYS*MSKVLI Trigger: GATCAACACCTTGCTCATCCATGAGTAATCATACGA...AACTGGTCCTCGGCTATGACAGTGAACACTTTTAACTTTCAGACAAAAGAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142366.3 ENSMUST00000233329.2 |
||
| CDS-3UTR TCA 90 bp | CATTCTGATCAACTTGGGGAAATCAAATTCTCTTTACAGCACATACCAAACTGGAAATTCATCGAAGTTTaGGGTATCATCGATGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HSDQLGEIKFSLQHIPNWKFIEV*GIIDAL Trigger: AAGAGCATCGATGATACCTCAAACTTCGATGAATTT...CCAGTTTGGTATGTGCTGTAAAGAGAATTTGATTTCCCCAAGTTGATCAGAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| 3UTR CAA 72 bp | TGCCACACTGTTGGCTGTTCACACAGACTTTCATTATaGCCTTATTTAACTACAGAATTTTCAGCTATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CHTVGCSHRLSL*PYLTTEFSAIR Trigger: CCTTATAGCTGAAAATTCTGTAGTTAAATAAGGCAATAATGAAAGTCTGTGTGAACAGCCAACAGTGTGGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CAA 90 bp | CGCTCCGCACGAATGTGGCCAACCTGCTCCTTCTCGAGCATGTCTGCTTTGCGCTTCTCCAGTGTCACTTaGGTCATTGTCACCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RSARMWPTCSFSSMSALRFSSVT*VIVTLS Trigger: GGAGAGGGTGACAATGACCAAAGTGACACTGGAGAA...GCGCAAAGCAGACATGCTCGAGAAGGAGCAGGTTGGCCACATTCGTGCGGAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233329.2 |
||
| CDS-3UTR CAA 90 bp | CCACCGGCACCTGCGAGACCGAGATTGTTCCTTCTGCCACACTGTTGGCTGTTCTTCTCCAGTGTCACTTaGGTCATTGTCACCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PPAPARPRLFLLPHCWLFFSSVT*VIVTLS Trigger: GGAGAGGGTGACAATGACCAAAGTGACACTGGAGAA...GAACAGCCAACAGTGTGGCAGAAGGAACAATCTCGGTCTCGCAGGTGCCGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CAA 90 bp | TTGGTGGGCTTGGCAGGTGGCATATCATCACCACAGCACAGGGCGTTGGCTGGTCAGTTCATCACTTTCTaGTATGTCTCTTGTGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LVGLAGGISSPQHRALAGQFITF*YVSCGV Trigger: GACCCCACAAGAGACATACAAGAAAGTGATGAACTG...ACCAGCCAACGCCCTGTGCTGTGGTGATGATATGCCACCTGCCAAGCCCACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CAA 90 bp | TACAGCCGTGAAGGGAAAGTAAGGGTTGTCCACAGGGTCCAGAACTCCTTGGCATCGAGCATGTCTGCTTaGCGCAGGATTTTCATTGCG | + |
|
Preference number: 5 (lower is better) Translates to: YSREGKVRVVHRVQNSLASSMSA*RRIFIA Trigger: CGCAATGAAAATCCTGCGCAAAGCAGACATGCTCGA...TGCCAAGGAGTTCTGGACCCTGTGGACAACCCTTACTTTCCCTTCACGGCTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CAA 90 bp | CAAACACGGTTGCACCATGGATTGAGGAATGAGCTCAAGGACCCAGCGGGCTGGCAGTTCATCACTTTCTaGTATGTCTCTTGTGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QTRLHHGLRNELKDPAGWQFITF*YVSCGV Trigger: GACCCCACAAGAGACATACAAGAAAGTGATGAACTG...CCAGCCCGCTGGGTCCTTGAGCTCATTCCTCAATCCATGGTGCAACCGTGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| CDS-3UTR CAA 90 bp | TGTTCCCATTCACAGCAGAACCTCAGAATCAGGCCCTTGGCTTTCTCGGAGACATCGAGCATGTCTGCTTaGCGCAGGATTTTCATTGCG | + |
|
Preference number: 5 (lower is better) Translates to: CSHSQQNLRIRPLAFSETSSMSA*RRIFIA Trigger: CGCAATGAAAATCCTGCGCAAAGCAGACATGCTCGA...TGTCTCCGAGAAAGCCAAGGGCCTGATTCTGAGGTTCTGCTGTGAATGGGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233606.2 |
||
| CDS-3UTR CAA 90 bp | TGCAGGTATTGCTTGCTGGTAGGCAGTGTGTGCCTCAAGATGATCTACAGCCGTCTGTCCAAGAGAAGGTaGTCTGGCTTGATATCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CRYCLLVGSVCLKMIYSRLSKRR*SGLISL Trigger: CAGAGATATCAAGCCAGACAACCTTCTCTTGGACAG...ACGGCTGTAGATCATCTTGAGGCACACACTGCCTACCAGCAAGCAATACCTGCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CAA 90 bp | ACACGGTTGCACCATGGATTGAGGAATGAGCTCAAGGACCCAGCGGGCTGGTCCGTATCATCGATGCTCTaGATTTCAATAGATATCGCA | + |
|
Preference number: 5 (lower is better) Translates to: TRLHHGLRNELKDPAGWSVSSML*ISIDIA Trigger: TGCGATATCTATTGAAATCAAGAGCATCGATGATAC...GGACCAGCCCGCTGGGTCCTTGAGCTCATTCCTCAATCCATGGTGCAACCGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| CDS-3UTR CAA 90 bp | CAGCACATACCAAACTGGCTCATGGGGCTTCAAAAGAAGCAAGCAGCTGCTTATTTCTCCAGTGTCACTTaGGTCATTGTCACCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QHIPNWLMGLQKKQAAAYFSSVT*VIVTLS Trigger: GGAGAGGGTGACAATGACCAAAGTGACACTGGAGAA...ATAAGCAGCTGCTTGCTTCTTTTGAAGCCCCATGAGCCAGTTTGGTATGTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CAA 90 bp | ATCAGCTTCCCGGTGCACCGTGGAGGAATATCCACTTACAATCACATTTCAGAGTCGAGCATGTCTGCTTaGCGCAGGATTTTCATTGCG | + |
|
Preference number: 5 (lower is better) Translates to: ISFPVHRGGISTYNHISESSMSA*RRIFIA Trigger: CGCAATGAAAATCCTGCGCAAAGCAGACATGCTCGA...CTCTGAAATGTGATTGTAAGTGGATATTCCTCCACGGTGCACCGGGAAGCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CAA 90 bp | TGGGCACTTGCATGGCAGCACTTGCAGGTATTGCTTGCTGGTAGGCAGTGTGTGGAAATTCATCGAAGTTaGAGGTATCATCGATGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: WALAWQHLQVLLAGRQCVEIHRS*RYHRCS Trigger: AGAGCATCGATGATACCTCAAACTTCGATGAATTTC...CACACACTGCCTACCAGCAAGCAATACCTGCAAGTGCTGCCATGCAAGTGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| CDS-3UTR CAA 90 bp | AGTGTGTGCCTCAAGATGATCTACAGCCGTGAAGGGAAAGTAAGGGTTGTCCACCAGTTCATCACTTTCTaGTATGTCTCTTGTGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SVCLKMIYSREGKVRVVHQFITF*YVSCGV Trigger: GACCCCACAAGAGACATACAAGAAAGTGATGAACTG...GTGGACAACCCTTACTTTCCCTTCACGGCTGTAGATCATCTTGAGGCACACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CAA 90 bp | CATGGCAGCACTTGCAGGTATTGCTTGCTGGTAGGCAGTGTGTGCCTCAAGATGGAAATTCATCGAAGTTaGAGGTATCATCGATGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HGSTCRYCLLVGSVCLKMEIHRS*RYHRCS Trigger: AGAGCATCGATGATACCTCAAACTTCGATGAATTTC...CATCTTGAGGCACACACTGCCTACCAGCAAGCAATACCTGCAAGTGCTGCCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CAA 90 bp | AGCGCAAGAGGAAAACCACAATGTTGTATAGAGACCACTGCCCCATTTAGGGTTCTGTCCAAGAGAAGGTaGTCTGGCTTGATATCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SARGKPQCCIETTAPFRVLSKRR*SGLISL Trigger: CAGAGATATCAAGCCAGACAACCTTCTCTTGGACAG...AACCCTAAATGGGGCAGTGGTCTCTATACAACATTGTGGTTTTCCTCTTGCGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CAA 90 bp | ACCCAGGACCAGAAGTCCCCCTCGGCATTCTGTTTTGTAAATATCACCCTAAAACTGTCCAAGAGAAGGTaGTCTGGCTTGATATCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TQDQKSPSAFCFVNITLKLSKRR*SGLISL Trigger: CAGAGATATCAAGCCAGACAACCTTCTCTTGGACAG...TTTTAGGGTGATATTTACAAAACAGAATGCCGAGGGGGACTTCTGGTCCTGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000141431.8 |
||
| CDS-3UTR CAA 90 bp | TGCAGGTATTGCTTGCTGGTAGGCAGTGTGTGCCTCAAGATGATCTACAGCCGTGAAATTCATCGAAGTTaGAGGTATCATCGATGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CRYCLLVGSVCLKMIYSREIHRS*RYHRCS Trigger: AGAGCATCGATGATACCTCAAACTTCGATGAATTTC...ACGGCTGTAGATCATCTTGAGGCACACACTGCCTACCAGCAAGCAATACCTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CAA 90 bp | GCAAAGGCCAAAGTCGGAAAGTTTCACATGGCCCTTGCTGTCCAAGAGAAGGTTTTCTCGTTCTTCATGTaGAGCGATAAGGTTGCTATA | + |
|
Preference number: 5 (lower is better) Translates to: AKAKVGKFHMALAVQEKVFSFFM*SDKVAI Trigger: TATAGCAACCTTATCGCTCAACATGAAGAACGAGAA...AACCTTCTCTTGGACAGCAAGGGCCATGTGAAACTTTCCGACTTTGGCCTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000233329.2 ENSMUST00000233510.2 ENSMUST00000233606.2 |
||
| CDS-3UTR CAA 90 bp | ACCCAGGACCAGAAGTCCCCCTCGGCATTCTGTTTTGTAAATATCACCCTAAAACAGTTCATCACTTTCTaGTATGTCTCTTGTGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TQDQKSPSAFCFVNITLKQFITF*YVSCGV Trigger: GACCCCACAAGAGACATACAAGAAAGTGATGAACTG...TTTTAGGGTGATATTTACAAAACAGAATGCCGAGGGGGACTTCTGGTCCTGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000141431.8 |
||
| CDS-3UTR CAA 90 bp | TCAAGACAAACACGGTTGCACCATGGATTGAGGAATGAGCTCAAGGACCCAGCGGTATCATCGATGCTCTaGATTTCAATAGATATCGCA | + |
|
Preference number: 5 (lower is better) Translates to: SRQTRLHHGLRNELKDPAVSSML*ISIDIA Trigger: TGCGATATCTATTGAAATCAAGAGCATCGATGATAC...CGCTGGGTCCTTGAGCTCATTCCTCAATCCATGGTGCAACCGTGTTTGTCTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| CDS-3UTR CAA 90 bp | TTCTTTTGTCTGAAAGTTAAAAGTGTTCACTGTCATAGCCGAGGACCAGTTCAGTTCTCCAGTGTCACTTaGGTCATTGTCACCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FFCLKVKSVHCHSRGPVQFSSVT*VIVTLS Trigger: GGAGAGGGTGACAATGACCAAAGTGACACTGGAGAA...CTGAACTGGTCCTCGGCTATGACAGTGAACACTTTTAACTTTCAGACAAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142366.3 ENSMUST00000233329.2 |
||
| CDS-3UTR CAA 90 bp | TTTAATCGAAGAAACTCTGTTTCCTTCCGAGCGTGCGCGGATCTTCTGAGTCGTTTCTCGTTCTTCATGTaGAGCGATAAGGTTGCTATA | + |
|
Preference number: 5 (lower is better) Translates to: FNRRNSVSFRACADLLSRFSFFM*SDKVAI Trigger: TATAGCAACCTTATCGCTCAACATGAAGAACGAGAA...ACGACTCAGAAGATCCGCGCACGCTCGGAAGGAAACAGAGTTTCTTCGATTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233329.2 |
||
| CDS-3UTR CAA 90 bp | CTTCTTGGAAGTTCTTTCAAGAGCGCAAGAGGAAAACCACAATGTTGTATAGAGCTGTCCAAGAGAAGGTaGTCTGGCTTGATATCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLGSSFKSARGKPQCCIELSKRR*SGLISL Trigger: CAGAGATATCAAGCCAGACAACCTTCTCTTGGACAG...CTCTATACAACATTGTGGTTTTCCTCTTGCGCTCTTGAAAGAACTTCCAAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CAA 90 bp | ACCCAGGACCAGAAGTCCCCCTCGGCATTCTGTTTTGTAAATATCACCCTAAAAGAAATTCATCGAAGTTaGAGGTATCATCGATGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TQDQKSPSAFCFVNITLKEIHRS*RYHRCS Trigger: AGAGCATCGATGATACCTCAAACTTCGATGAATTTC...TTTTAGGGTGATATTTACAAAACAGAATGCCGAGGGGGACTTCTGGTCCTGGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000141431.8 |
||
| CDS-3UTR CAA 90 bp | AGGTCAGTAGATCAGGGTCTTTGTCCTAGTACCATAAGTAAAGTGCACCATGAGTTCTCGTTCTTCATGTaGAGCGATAAGGTTGCTATA | + |
|
Preference number: 5 (lower is better) Translates to: RSVDQGLCPSTISKVHHEFSFFM*SDKVAI Trigger: TATAGCAACCTTATCGCTCAACATGAAGAACGAGAA...CTCATGGTGCACTTTACTTATGGTACTAGGACAAAGACCCTGATCTACTGACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CAA 90 bp | TTTTCTGACACAGCGAAAAATCTTCTAAAGGTGGCAGCAGCCATGACAGAGAAGTTCTCGTTCTTCATGTaGAGCGATAAGGTTGCTATA | + |
|
Preference number: 5 (lower is better) Translates to: FSDTAKNLLKVAAAMTEKFSFFM*SDKVAI Trigger: TATAGCAACCTTATCGCTCAACATGAAGAACGAGAA...CTTCTCTGTCATGGCTGCTGCCACCTTTAGAAGATTTTTCGCTGTGTCAGAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 |
||
| CDS-3UTR CAA 90 bp | GCAGTGCCCAGTGCCTTTATGGGCTTTCTAAGATCAAAAAGGATCACACTAGTATTCTCGTTCTTCATGTaGAGCGATAAGGTTGCTATA | + |
|
Preference number: 5 (lower is better) Translates to: AVPSAFMGFLRSKRITLVFSFFM*SDKVAI Trigger: TATAGCAACCTTATCGCTCAACATGAAGAACGAGAA...TACTAGTGTGATCCTTTTTGATCTTAGAAAGCCCATAAAGGCACTGGGCACTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CAA 90 bp | ACCCAGGACCAGAAGTCCCCCTCGGCATTCTGTTTTGTAAATATCACCCTAAAAGTATCATCGATGCTCTaGATTTCAATAGATATCGCA | + |
|
Preference number: 5 (lower is better) Translates to: TQDQKSPSAFCFVNITLKVSSML*ISIDIA Trigger: TGCGATATCTATTGAAATCAAGAGCATCGATGATAC...TTTTAGGGTGATATTTACAAAACAGAATGCCGAGGGGGACTTCTGGTCCTGGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000141431.8 |
||
| CDS TCA 90 bp | CACTGTGGGCTTAAGAATATCAGACTCTGGAAATTCATCGAAGTTTaGGGTATCATCGATGCTCTTGATTTCAATAGATATCGCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HCGLKNIRLWKFIEV*GIIDALDFNRYRSW Trigger: CCAGCTGCGATATCTATTGAAATCAAGAGCATCGATGATACCTCAAACTTCGATGAATTTCCAGAGTCTGATATTCTTAAGCCCACAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS TCA 90 bp | ACCTGTGGGCTTAAGAATATCAGACTCTGGAAATTCATCGAAGTTTaGGGTATCATCGATGCTCTTGATTTCAATAGATATCGCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TCGLKNIRLWKFIEV*GIIDALDFNRYRSW Trigger: CCAGCTGCGATATCTATTGAAATCAAGAGCATCGATGATACCTCAAACTTCGATGAATTTCCAGAGTCTGATATTCTTAAGCCCACAGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141431.8 |
||
| CDS-3UTR CAA 90 bp | TTCATTCTGATCAACTTGGGGAAATCAAATTCTCTTTACAGCACATACCAAACTTTCTCCAGTGTCACTTaGGTCATTGTCACCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FILINLGKSNSLYSTYQTFSSVT*VIVTLS Trigger: GGAGAGGGTGACAATGACCAAAGTGACACTGGAGAA...AGTTTGGTATGTGCTGTAAAGAGAATTTGATTTCCCCAAGTTGATCAGAATGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CAA 90 bp | GGATGTATTAATGAATTCTACAAACTTCTTGGAAGTTCTTTCAAGAGCGCAAGATCGAGCATGTCTGCTTaGCGCAGGATTTTCATTGCG | + |
|
Preference number: 5 (lower is better) Translates to: GCINEFYKLLGSSFKSARSSMSA*RRIFIA Trigger: CGCAATGAAAATCCTGCGCAAAGCAGACATGCTCGA...TCTTGCGCTCTTGAAAGAACTTCCAAGAAGTTTGTAGAATTCATTAATACATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CAA 90 bp | GCAGTGCCCAGTGCCTTTATGGGCTTTCTAAGATCAAAAAGGATCACACTAGTAGTATCATCGATGCTCTaGATTTCAATAGATATCGCA | + |
|
Preference number: 5 (lower is better) Translates to: AVPSAFMGFLRSKRITLVVSSML*ISIDIA Trigger: TGCGATATCTATTGAAATCAAGAGCATCGATGATAC...TACTAGTGTGATCCTTTTTGATCTTAGAAAGCCCATAAAGGCACTGGGCACTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000232836.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTTTGTCTGAAAGTTAAAAGTGTTCACTGTCATAGCCGAGGACCAGTTCAGTTCTCGTTCTTCATGTaGAGCGATAAGGTTGCTATA | + |
|
Preference number: 5 (lower is better) Translates to: FFCLKVKSVHCHSRGPVQFSFFM*SDKVAI Trigger: TATAGCAACCTTATCGCTCAACATGAAGAACGAGAA...CTGAACTGGTCCTCGGCTATGACAGTGAACACTTTTAACTTTCAGACAAAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142366.3 ENSMUST00000233329.2 |
||
| CDS CAA 90 bp | TCAGACTCTGGAAATTCATCGAAGTTTGAGGTATCATCGATGCTCTaGATTTCAATAGATATCGCAGCTGGTCTCTCCCTGATGTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SDSGNSSKFEVSSML*ISIDIAAGLSLMCS Trigger: GGAACACATCAGGGAGAGACCAGCTGCGATATCTATTGAAATCAAGAGCATCGATGATACCTCAAACTTCGATGAATTTCCAGAGTCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000141431.8 ENSMUST00000232836.2 |
||
| CDS CAA 72 bp | GGAAATTCATCGAAGTTTGAGGTATCATCGATGCTCTaGATTTCAATAGATATCGCAGCTGGTCTCTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GNSSKFEVSSML*ISIDIAAGLSL Trigger: CAGGGAGAGACCAGCTGCGATATCTATTGAAATCAAGAGCATCGATGATACCTCAAACTTCGATGAATTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009138.13 ENSMUST00000119274.3 ENSMUST00000141431.8 ENSMUST00000232836.2 |
||