RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STK36 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000033276

Ensembl transcript IDs: ENSMUST00000087183.11, ENSMUST00000087186.11, ENSMUST00000113694.8, ENSMUST00000148456.8, ENSMUST00000189830.2

Found 478 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTGCTGGTTCAGTTATGATGGTGACACGGCCGGCAATAAAGGGGTaGTGTAAGAGGTCTGGCCAGGACAGACGCTGCCGGGGGTCCTTG +
Preference number: 1 (lower is better)
Translates to: PAGSVMMVTRPAIKG*CKRSGQDRRCRGSL
Trigger: CAAGGACCCCCGGCAGCGTCTGTCCTGGCCAGACCTCTTACATCACCCCTTTATTGCCGGCCGTGTCACCATCATAACTGAACCAGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000189830.2
3UTR GCA 90 bp GAGTTTACAGGCCTGGCGCAGGATGCGAGACTGGTTACCCTTGGGTaGGAGCCGATGCGCCTGTTCATCCTTGAGGACCTGAAGTTCTGG +
Preference number: 1 (lower is better)
Translates to: EFTGLAQDARLVTLG*EPMRLFILEDLKFW
Trigger: CCAGAACTTCAGGTCCTCAAGGATGAACAGGCGCATCGGCTCGCACCCAAGGGTAACCAGTCTCGCATCCTGCGCCAGGCCTGTAAACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189830.2
3UTR CCA 90 bp GCTTCTTCAGCCATGAGTTTACAGGCCTGGCGCAGGATGCGAGACTaGTTACCCTTGGGTGCGAGCCGATGCGCCTGTTCATCCTTGAGG +
Preference number: 1 (lower is better)
Translates to: ASSAMSLQAWRRMRD*LPLGASRCACSSLR
Trigger: CCTCAAGGATGAACAGGCGCATCGGCTCGCACCCAAGGGTAACCAGTCTCGCATCCTGCGCCAGGCCTGTAAACTCATGGCTGAAGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189830.2
3UTR TCA 90 bp TTACCCTTGGGTGCGAGCCGATGCGCCTGTTCATCCTTGAGGACCTaGAGTTCTGGGGGTAGGCGACTAGTAAATGGGGTGCCCAAATCG +
Preference number: 1 (lower is better)
Translates to: LPLGASRCACSSLRT*SSGGRRLVNGVPKS
Trigger: CGATTTGGGCACCCCATTTACTAGTCGCCTACCCCCAGAACTTCAGGTCCTCAAGGATGAACAGGCGCATCGGCTCGCACCCAAGGGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000189830.2
3UTR TCA 90 bp GGACTGAACCCGAGCACCCCATACCTAGGAGCAAGCACTGATCGCTaGGCGGTACCAAGAGGAGCCTCTCCTTTTACTGGATGGAGAAAT +
Preference number: 1 (lower is better)
Translates to: GLNPSTPYLGASTDR*AVPRGASPFTGWRN
Trigger: ATTTCTCCATCCAGTAAAAGGAGAGGCTCCTCTTGGTACCGCTCAGCGATCAGTGCTTGCTCCTAGGTATGGGGTGCTCGGGTTCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
3UTR TCA 90 bp GAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTGGCTaGGTTAGTAGCTTGGGTAGGAGAATAAGGAAATCTTGGCAACAG +
Preference number: 1 (lower is better)
Translates to: ELAAQHSFSVSSALG*VSSLGRRIRKSWQQ
Trigger: CTGTTGCCAAGATTTCCTTATTCTCCTACCCAAGCTACTAACTCAGCCAAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
3UTR CCA 90 bp ACCAAGAGGAGCCTCTCCTTTTACTGGATGGAGAAATCGGGGACCTaGAAGCTTATCTCAGTCAAGCTTCCTAATACACATGCAGTTAGA +
Preference number: 1 (lower is better)
Translates to: TKRSLSFYWMEKSGT*KLISVKLPNTHAVR
Trigger: TCTAACTGCATGTGTATTAGGAAGCTTGACTGAGATAAGCTTCCAGGTCCCCGATTTCTCCATCCAGTAAAAGGAGAGGCTCCTCTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
3UTR-3UTR GCA 90 bp AGCCATGAGTTTACAGGCCTGGCGCAGGATGCGAGACTGGTTACCCTTGGGTGCGGCCAGGACAGACGCTaGCGGGGGTCCTTGGTGAGC +
Preference number: 2 (lower is better)
Translates to: SHEFTGLAQDARLVTLGCGQDRR*RGSLVS
Trigger: GCTCACCAAGGACCCCCGGCAGCGTCTGTCCTGGCC...GCACCCAAGGGTAACCAGTCTCGCATCCTGCGCCAGGCCTGTAAACTCATGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000189830.2
3UTR-3UTR CCA 90 bp AGCCATGAGTTTACAGGCCTGGCGCAGGATGCGAGACTGGTTACCCTTGGGTGCGCTGAAAGATGCTGGTaGTGTAGAAGGGAGGCGTGC +
Preference number: 2 (lower is better)
Translates to: SHEFTGLAQDARLVTLGCAERCW*CRREAC
Trigger: GCACGCCTCCCTTCTACACCACCAGCATCTTTCAGC...GCACCCAAGGGTAACCAGTCTCGCATCCTGCGCCAGGCCTGTAAACTCATGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189830.2
3UTR-3UTR TCA 90 bp TCTGGGGGTAGGCGACTAGTAAATGGGGTGCCCAAATCGGAGCCTGCTGGTTCACCGGCAATAAAGGGGTaGTGTAAGAGGTCTGGCCAG +
Preference number: 2 (lower is better)
Translates to: SGGRRLVNGVPKSEPAGSPAIKG*CKRSGQ
Trigger: CTGGCCAGACCTCTTACATCACCCCTTTATTGCCGG...TGAACCAGCAGGCTCCGATTTGGGCACCCCATTTACTAGTCGCCTACCCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000189830.2
3UTR-3UTR GCA 90 bp ATCGGAGCCTGCTGGTTCAGTTATGATGGTGACACGGCCGGCAATAAAGGGGTGTGTAGAAGGGAGGCGTaGCGACAGCCAGCTCATACA +
Preference number: 2 (lower is better)
Translates to: IGACWFSYDGDTAGNKGVCRREA*RQPAHT
Trigger: TGTATGAGCTGGCTGTCGGCACGCCTCCCTTCTACA...CACCCCTTTATTGCCGGCCGTGTCACCATCATAACTGAACCAGCAGGCTCCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189830.2
3UTR-3UTR TCA 90 bp TACTGGATGGAGAAATCGGGGACCTGGAAGCTTATCTCAGTCAAGCTTCCTAATGCATGGTCCTGGGGTTaGGGGCCCATTACTGGAGGA +
Preference number: 2 (lower is better)
Translates to: YWMEKSGTWKLISVKLPNAWSWG*GPITGG
Trigger: TCCTCCAGTAATGGGCCCTCAACCCCAGGACCATGC...ATTAGGAAGCTTGACTGAGATAAGCTTCCAGGTCCCCGATTTCTCCATCCAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
3UTR-3UTR CCA 90 bp TACTGGATGGAGAAATCGGGGACCTGGAAGCTTATCTCAGTCAAGCTTCCTAATTTGAGGGCCCATTACTaGAGGAAAGATCCCTACGTG +
Preference number: 2 (lower is better)
Translates to: YWMEKSGTWKLISVKLPNLRAHY*RKDPYV
Trigger: CACGTAGGGATCTTTCCTCCAGTAATGGGCCCTCAA...ATTAGGAAGCTTGACTGAGATAAGCTTCCAGGTCCCCGATTTCTCCATCCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
3UTR GCA 72 bp GGCCTGGCGCAGGATGCGAGACTGGTTACCCTTGGGTaGGAGCCGATGCGCCTGTTCATCCTTGAGGACCTG +
Preference number: 3 (lower is better)
Translates to: GLAQDARLVTLG*EPMRLFILEDL
Trigger: CAGGTCCTCAAGGATGAACAGGCGCATCGGCTCGCACCCAAGGGTAACCAGTCTCGCATCCTGCGCCAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189830.2
3UTR CCA 72 bp GCCATGAGTTTACAGGCCTGGCGCAGGATGCGAGACTaGTTACCCTTGGGTGCGAGCCGATGCGCCTGTTCA +
Preference number: 3 (lower is better)
Translates to: AMSLQAWRRMRD*LPLGASRCACS
Trigger: TGAACAGGCGCATCGGCTCGCACCCAAGGGTAACCAGTCTCGCATCCTGCGCCAGGCCTGTAAACTCATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189830.2
3UTR GCA 72 bp CCAGCTGAAAGATGCTGGTGGTGTAGAAGGGAGGCGTaGCGACAGCCAGCTCATACAGGATGCAGCCCACAG +
Preference number: 3 (lower is better)
Translates to: PAERCWWCRREA*RQPAHTGCSPQ
Trigger: CTGTGGGCTGCATCCTGTATGAGCTGGCTGTCGGCACGCCTCCCTTCTACACCACCAGCATCTTTCAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189830.2
3UTR TCA 72 bp GGTGCGAGCCGATGCGCCTGTTCATCCTTGAGGACCTaGAGTTCTGGGGGTAGGCGACTAGTAAATGGGGTG +
Preference number: 3 (lower is better)
Translates to: GASRCACSSLRT*SSGGRRLVNGV
Trigger: CACCCCATTTACTAGTCGCCTACCCCCAGAACTTCAGGTCCTCAAGGATGAACAGGCGCATCGGCTCGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000189830.2
3UTR GCA 72 bp GACAGACGCTGCCGGGGGTCCTTGGTGAGCAGCCCCTaGAAGAAGTTCTTGAAGCAGGAACTAATGGTGGAG +
Preference number: 3 (lower is better)
Translates to: DRRCRGSLVSSP*KKFLKQELMVE
Trigger: CTCCACCATTAGTTCCTGCTTCAAGAACTTCTTGCAGGGGCTGCTCACCAAGGACCCCCGGCAGCGTCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000189830.2
3UTR TCA 72 bp CCGAGCACCCCATACCTAGGAGCAAGCACTGATCGCTaGGCGGTACCAAGAGGAGCCTCTCCTTTTACTGGA +
Preference number: 3 (lower is better)
Translates to: PSTPYLGASTDR*AVPRGASPFTG
Trigger: TCCAGTAAAAGGAGAGGCTCCTCTTGGTACCGCTCAGCGATCAGTGCTTGCTCCTAGGTATGGGGTGCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
3UTR TCA 72 bp TCAGTTATGATGGTGACACGGCCGGCAATAAAGGGGTaGTGTAAGAGGTCTGGCCAGGACAGACGCTGCCGG +
Preference number: 3 (lower is better)
Translates to: SVMMVTRPAIKG*CKRSGQDRRCR
Trigger: CCGGCAGCGTCTGTCCTGGCCAGACCTCTTACATCACCCCTTTATTGCCGGCCGTGTCACCATCATAACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189830.2
3UTR-3UTR CAA 90 bp GCGAGACTGGTTACCCTTGGGTGCGAGCCGATGCGCCTGTTCATCCTTGAGGACCCCTGCAAGAAGTTCTaGAAGCAGGAACTAATGGTG +
Preference number: 3 (lower is better)
Translates to: ARLVTLGCEPMRLFILEDPCKKF*KQELMV
Trigger: CACCATTAGTTCCTGCTTCAAGAACTTCTTGCAGGG...GTCCTCAAGGATGAACAGGCGCATCGGCTCGCACCCAAGGGTAACCAGTCTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189830.2
3UTR-3UTR CAA 90 bp GCTGAGCGGTACCAAGAGGAGCCTCTCCTTTTACTGGATGGAGAAATCGGGGACCAGTCTCATCAGCTCTaGGCTGAGTTAGTAGCTTGG +
Preference number: 3 (lower is better)
Translates to: AERYQEEPLLLLDGEIGDQSHQL*AELVAW
Trigger: CCAAGCTACTAACTCAGCCAAGAGCTGATGAGACTG...GTCCCCGATTTCTCCATCCAGTAAAAGGAGAGGCTCCTCTTGGTACCGCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
3UTR-3UTR CAA 90 bp GACTGTATTATCTCAAAGCACCTTGCTTTACCTCTGTTTAGCCCCAGTCGTGTCTCACTTGGAGGGGAGTaGGCAGCTCAGCACTCTTTC +
Preference number: 3 (lower is better)
Translates to: DCIISKHLALPLFSPSRVSLGGE*AAQHSF
Trigger: GAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGA...GACACGACTGGGGCTAAACAGAGGTAAAGCAAGGTGCTTTGAGATAATACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
3UTR CCA 72 bp AGAAAATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTaGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTC +
Preference number: 3 (lower is better)
Translates to: RKSLLVSHLEGS*QLSTLSQSHQL
Trigger: GAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGATTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
3UTR CCA 72 bp AGCCTCTCCTTTTACTGGATGGAGAAATCGGGGACCTaGAAGCTTATCTCAGTCAAGCTTCCTAATACACAT +
Preference number: 3 (lower is better)
Translates to: SLSFYWMEKSGT*KLISVKLPNTH
Trigger: ATGTGTATTAGGAAGCTTGACTGAGATAAGCTTCCAGGTCCCCGATTTCTCCATCCAGTAAAAGGAGAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
3UTR-3UTR CAA 90 bp GGAAGCTTATCTCAGTCAAGCTTCCTAATACACATGCAGTTAGATTCTAATGTGCTTCTAGTTTCTCACTaGGAGGGGAGTTGGCAGCTC +
Preference number: 3 (lower is better)
Translates to: GSLSQSSFLIHMQLDSNVLLVSH*EGSWQL
Trigger: GAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAG...CACATTAGAATCTAACTGCATGTGTATTAGGAAGCTTGACTGAGATAAGCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR TCA 90 bp GGCCTGGCGCAGGATGCGAGACTGGTTACCCTTGGGTGCGAGCCGATGCGCCTGAGAGCGGTGTGCCTTTaGTCGACGTCAGCACCATGG +
Preference number: 4 (lower is better)
Translates to: GLAQDARLVTLGCEPMRLRAVCL*STSAPW
Trigger: CCATGGTGCTGACGTCGATCAAAGGCACACCGCTCT...CAGGCGCATCGGCTCGCACCCAAGGGTAACCAGTCTCGCATCCTGCGCCAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189830.2
CDS-3UTR GCA 90 bp CCTCCCATCAGCTGGGGACTGAACCCGAGCACCCCATACCTAGGAGCAAGCACTAGAAACTCGGGCCCCTaGGGCGCCTGGCTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PPISWGLNPSTPYLGASTRNSGP*GAWLRW
Trigger: CCACCTGAGCCAGGCGCCGCAGGGGCCCGAGTTTCT...AGTGCTTGCTCCTAGGTATGGGGTGCTCGGGTTCAGTCCCCAGCTGATGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp CCTCCCATCAGCTGGGGACTGAACCCGAGCACCCCATACCTAGGAGCAAGCACTCGGCTGGCTCACTTGTaGGGCTCCTGGTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: PPISWGLNPSTPYLGASTRLAHL*GSWWCV
Trigger: CACACACCACCAGGAGCCCCACAAGTGAGCCAGCCG...AGTGCTTGCTCCTAGGTATGGGGTGCTCGGGTTCAGTCCCCAGCTGATGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp CCTCCCATCAGCTGGGGACTGAACCCGAGCACCCCATACCTAGGAGCAAGCACTTGGCATCCCAACAGCTaGGCAGCCCCACAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PPISWGLNPSTPYLGASTWHPNS*AAPQEQ
Trigger: CTGCTCCTGTGGGGCTGCCCAGCTGTTGGGATGCCA...AGTGCTTGCTCCTAGGTATGGGGTGCTCGGGTTCAGTCCCCAGCTGATGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
3UTR CAA 72 bp AAGAGGTCTGGCCAGGACAGACGCTGCCGGGGGTCCTaGGTGAGCAGCCCCTGCAAGAAGTTCTTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: KRSGQDRRCRGS*VSSPCKKFLKQ
Trigger: CTGCTTCAAGAACTTCTTGCAGGGGCTGCTCACCAAGGACCCCCGGCAGCGTCTGTCCTGGCCAGACCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000189830.2
3UTR CAA 72 bp TTACAGGCCTGGCGCAGGATGCGAGACTGGTTACCCTaGGGTGCGAGCCGATGCGCCTGTTCATCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: LQAWRRMRDWLP*GASRCACSSLR
Trigger: CCTCAAGGATGAACAGGCGCATCGGCTCGCACCCAAGGGTAACCAGTCTCGCATCCTGCGCCAGGCCTGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189830.2
CDS-3UTR TCA 90 bp CTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTCCAGTCCCGCGCAGCTaGCTCTGGATGCGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LTWRGVGSSALFLSLISSPVPRS*LWMRWQ
Trigger: CTGCCAGCGCATCCAGAGTCAGCTGCGCGGGACTGG...AGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp TCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTCCGGCCCATCGCCTCTaGCCTCGGCTCTGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SLGGELAAQHSFSVSSALPAHRL*PRLWEA
Trigger: GGCTTCCCAGAGCCGAGGCCAGAGGCGATGGGCCGG...AAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp CCTCCCATCAGCTGGGGACTGAACCCGAGCACCCCATACCTAGGAGCAAGCACTCCATGCTGGGACAGGTaGCTCAGGCATAACTGGGAC +
Preference number: 4 (lower is better)
Translates to: PPISWGLNPSTPYLGASTPCWDR*LRHNWD
Trigger: GTCCCAGTTATGCCTGAGCCACCTGTCCCAGCATGG...AGTGCTTGCTCCTAGGTATGGGGTGCTCGGGTTCAGTCCCCAGCTGATGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp AGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCACCGGCCCATCGCCTCTaGCCTCGGCTCTGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SFSLGGELAAQHSFSVSSPAHRL*PRLWEA
Trigger: GGCTTCCCAGAGCCGAGGCCAGAGGCGATGGGCCGG...TGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp GGTGTCAGAGAAGCTAGAAAAGGGCCCAAGCTTCCCACCCCTTACCTTGGGAGCGCAGCTGGGTCATACTaGGCACTGCAGCTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: GVREARKGPKLPTPYLGSAAGSY*ALQLPR
Trigger: CCTTGGCAGCTGCAGTGCCCAGTATGACCCAGCTGC...GCTCCCAAGGTAAGGGGTGGGAAGCTTGGGCCCTTTTCTAGCTTCTCTGACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR TCA 90 bp TCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGCCAGTCCCGCGCAGCTaGCTCTGGATGCGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SLLVSHLEGSWQLSTLSQPVPRS*LWMRWQ
Trigger: CTGCCAGCGCATCCAGAGTCAGCTGCGCGGGACTGG...CTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp CTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTGGCCAGGACAGACGCTaGCGGGGGTCCTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: LLVSHLEGSWQLSTLSQSGQDRR*RGSLVS
Trigger: GCTCACCAAGGACCCCCGGCAGCGTCTGTCCTGGCC...AGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp CCTCCCATCAGCTGGGGACTGAACCCGAGCACCCCATACCTAGGAGCAAGCACTGGAGACTACTCAGGATaGGGAGTACAGGAAGGAGGT +
Preference number: 4 (lower is better)
Translates to: PPISWGLNPSTPYLGASTGDYSG*GVQEGG
Trigger: ACCTCCTTCCTGTACTCCGCATCCTGAGTAGTCTCC...AGTGCTTGCTCCTAGGTATGGGGTGCTCGGGTTCAGTCCCCAGCTGATGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR GCA 90 bp TCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGAGAAACTCGGGCCCCTaGGGCGCCTGGCTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SLLVSHLEGSWQLSTLSQRNSGP*GAWLRW
Trigger: CCACCTGAGCCAGGCGCCGCAGGGGCCCGAGTTTCT...CTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp CCTCCCATCAGCTGGGGACTGAACCCGAGCACCCCATACCTAGGAGCAAGCACTTGGATAAAGGACAAGTaGCTGGGGGACAGAATCCGG +
Preference number: 4 (lower is better)
Translates to: PPISWGLNPSTPYLGASTWIKDK*LGDRIR
Trigger: CCGGATTCTGTCCCCCAGCCACTTGTCCTTTATCCA...AGTGCTTGCTCCTAGGTATGGGGTGCTCGGGTTCAGTCCCCAGCTGATGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp CACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTGTGCCCACAGCAAAGCTaGCACTGCGTCGCACGGCAG +
Preference number: 4 (lower is better)
Translates to: HLEGSWQLSTLSQSHQLLCPQQS*HCVARQ
Trigger: CTGCCGTGCGACGCAGTGCCAGCTTTGCTGTGGGCA...CAAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp CTGAGCGGTACCAAGAGGAGCCTCTCCTTTTACTGGATGGAGAAATCGGGGACCGCCCCAGTTTGGGGATaGACTTCAAGGCCACCACCT +
Preference number: 4 (lower is better)
Translates to: LSGTKRSLSFYWMEKSGTAPVWG*TSRPPP
Trigger: AGGTGGTGGCCTTGAAGTTCATCCCCAAACTGGGGC...GGTCCCCGATTTCTCCATCCAGTAAAAGGAGAGGCTCCTCTTGGTACCGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR TCA 90 bp ACAGGGTACAGGGCTTCCGGTGTCAGAGAAGCTAGAAAAGGGCCCAAGCTTCCCCCGGCAATAAAGGGGTaGTGTAAGAGGTCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: TGYRASGVREARKGPKLPPAIKG*CKRSGQ
Trigger: CTGGCCAGACCTCTTACATCACCCCTTTATTGCCGG...GGGAAGCTTGGGCCCTTTTCTAGCTTCTCTGACACCGGAAGCCCTGTACCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR TCA 90 bp CACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTGGTCGCAGACCAGAGATaGGGGATGGCCTCAGTTGGC +
Preference number: 4 (lower is better)
Translates to: HLEGSWQLSTLSQSHQLLVADQR*GMASVG
Trigger: GCCAACTGAGGCCATCCCTCATCTCTGGTCTGCGAC...CAAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp GGTGTCAGAGAAGCTAGAAAAGGGCCCAAGCTTCCCACCCCTTACCTTGGGAGCAGGCGTAGAGAACCTTaGGAAGGTGGAGGCACAGGA +
Preference number: 4 (lower is better)
Translates to: GVREARKGPKLPTPYLGSRRREP*EGGGTG
Trigger: TCCTGTGCCTCCACCTTCTCAAGGTTCTCTACGCCT...GCTCCCAAGGTAAGGGGTGGGAAGCTTGGGCCCTTTTCTAGCTTCTCTGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR TCA 90 bp TTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCGCCGGATCCCATCCTaGGCATCTCCAAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: FSLGGELAAQHSFSVSSARRIPS*ASPSSW
Trigger: CCAGCTGCTTGGAGATGCTCAGGATGGGATCCGGCG...AGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp ACAGGGTACAGGGCTTCCGGTGTCAGAGAAGCTAGAAAAGGGCCCAAGCTTCCCCACAGACCAGAGGTCTaGGGTGTGGTCATATGGTCG +
Preference number: 4 (lower is better)
Translates to: TGYRASGVREARKGPKLPHRPEV*GVVIWS
Trigger: CGACCATATGACCACACCGCAGACCTCTGGTCTGTG...GGGAAGCTTGGGCCCTTTTCTAGCTTCTCTGACACCGGAAGCCCTGTACCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR GCA 90 bp CTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTAGTCAGCCGGACCTCTaGAGGGGCAGACAAGGCATG +
Preference number: 4 (lower is better)
Translates to: LTWRGVGSSALFLSLISSSQPDL*RGRQGM
Trigger: CATGCCTTGTCTGCCCCTGCAGAGGTCCGGCTGACT...AGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp TTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCCAGCAAAGCTGGCACTaGGTCGCACGGCAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: FLTWRGVGSSALFLSLISQQSWH*VARQGP
Trigger: AGGACCCTGCCGTGCGACGCAGTGCCAGCTTTGCTG...GCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp CTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTCGCAGGATGCGAGACTaGTTACCCTTGGGTGCGAGC +
Preference number: 4 (lower is better)
Translates to: LTWRGVGSSALFLSLISSRRMRD*LPLGAS
Trigger: GCTCGCACCCAAGGGTAACCAGTCTCGCATCCTGCG...AGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp TTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTTGGCATCCCAACAGCTaGGCAGCCCCACAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: FSLGGELAAQHSFSVSSAWHPNS*AAPQEQ
Trigger: CTGCTCCTGTGGGGCTGCCCAGCTGTTGGGATGCCA...AGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp GGTGTCAGAGAAGCTAGAAAAGGGCCCAAGCTTCCCACCCCTTACCTTGGGAGCAACAACGAAAGGTGGTaGCAGCAGACCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GVREARKGPKLPTPYLGSNNERW*QQTCSR
Trigger: CCTGCTGCAGGTCTGCTGCCACCACCTTTCGTTGTT...GCTCCCAAGGTAAGGGGTGGGAAGCTTGGGCCCTTTTCTAGCTTCTCTGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR TCA 90 bp CTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTCCTCAGCTCTTTCTCTaGGCGCCCCAGTTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: LTWRGVGSSALFLSLISSPQLFL*APQFGD
Trigger: ATCCCCAAACTGGGGCGCTCAGAGAAAGAGCTGAGG...AGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp CTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTGCGCCTGTTCATCCTTaGGGACCTGAAGTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: LTWRGVGSSALFLSLISSAPVHP*GPEVLG
Trigger: CCCCAGAACTTCAGGTCCTCAAGGATGAACAGGCGC...AGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp CACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTGACCAGCCAAGAGGCTTaGCTCCTGAGGAGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: HLEGSWQLSTLSQSHQLLTSQEA*LLRSGL
Trigger: AAGGCCACTCCTCAGGAGTCAAGCCTCTTGGCTGGT...CAAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp CCAAGAGGAGCCTCTCCTTTTACTGGATGGAGAAATCGGGGACCTGGAAGCTTAGCTTCAGGGTCAGCATaGGGACACTGCCATGCTGGG +
Preference number: 4 (lower is better)
Translates to: PRGASPFTGWRNRGPGSLASGSA*GHCHAG
Trigger: CCCAGCATGGCAGTGTCCTCATGCTGACCCTGAAGC...TAAGCTTCCAGGTCCCCGATTTCTCCATCCAGTAAAAGGAGAGGCTCCTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR TCA 90 bp TTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCCACTTCCGAGGCCCTaGGGTCAGCCAAGACACCTA +
Preference number: 4 (lower is better)
Translates to: FSLGGELAAQHSFSVSSAPLPRP*GQPRHL
Trigger: TAGGTGTCTTGGCTGACCTCAGGGCCTCGGAAGTGG...AGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp CACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTGGGAGGTCAGAGATCATaGGGGGCTGGTCACTCAGGA +
Preference number: 4 (lower is better)
Translates to: HLEGSWQLSTLSQSHQLLGGQRS*GAGHSG
Trigger: TCCTGAGTGACCAGCCCCTCATGATCTCTGACCTCC...CAAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp CTGAGCGGTACCAAGAGGAGCCTCTCCTTTTACTGGATGGAGAAATCGGGGACCTGTAGAAGGGAGGCGTaGCGACAGCCAGCTCATACA +
Preference number: 4 (lower is better)
Translates to: LSGTKRSLSFYWMEKSGTCRREA*RQPAHT
Trigger: TGTATGAGCTGGCTGTCGGCACGCCTCCCTTCTACA...GGTCCCCGATTTCTCCATCCAGTAAAAGGAGAGGCTCCTCTTGGTACCGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR GCA 90 bp AAATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTGGCCAGGACAGACGCTaGCGGGGGTCCTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: KSLLVSHLEGSWQLSTLSGQDRR*RGSLVS
Trigger: GCTCACCAAGGACCCCCGGCAGCGTCTGTCCTGGCC...AGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp TTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTAGTCAGCCGGACCTCTaGAGGGGCAGACAAGGCATG +
Preference number: 4 (lower is better)
Translates to: FSLGGELAAQHSFSVSSASQPDL*RGRQGM
Trigger: CATGCCTTGTCTGCCCCTGCAGAGGTCCGGCTGACT...AGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp TCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGCAGCAAAGCTGGCACTaGGTCGCACGGCAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: SLLVSHLEGSWQLSTLSQQQSWH*VARQGP
Trigger: AGGACCCTGCCGTGCGACGCAGTGCCAGCTTTGCTG...CTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp GTACTTAAGGCAAAAGTAGCCGGGCAGATTACAGGAGAGCCAGTAAGGCAGAGGACTGGGCACTGCAGCTaGCAAGGCAGGTCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: VLKAKVAGQITGEPVRQRTGHCS*QGRSQR
Trigger: CCTTTGGGACCTGCCTTGGCAGCTGCAGTGCCCAGT...CCTCTGCCTTACTGGCTCTCCTGTAATCTGCCCGGCTACTTTTGCCTTAAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR GCA 90 bp TTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCACTGGGCACTGCAGCTaGCAAGGCAGGTCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: FLTWRGVGSSALFLSLISTGHCS*QGRSQR
Trigger: CCTTTGGGACCTGCCTTGGCAGCTGCAGTGCCCAGT...GCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp CTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTGAGCTGATGCAGCATTaGGCCGGATCCCATCCTGAG +
Preference number: 4 (lower is better)
Translates to: LTWRGVGSSALFLSLISSELMQH*AGSHPE
Trigger: CTCAGGATGGGATCCGGCGCAATGCTGCATCAGCTC...AGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp CTGAAAGATGCTGGTGGTGTAGAAGGGAGGCGTGCCGACAGCCAGCTCATACAGGCATATGCACAATGTTaGGATGCCACAGACCCCGCA +
Preference number: 4 (lower is better)
Translates to: LKDAGGVEGRRADSQLIQAYAQC*DATDPA
Trigger: TGCGGGGTCTGTGGCATCCCAACATTGTGCATATGC...CTGTATGAGCTGGCTGTCGGCACGCCTCCCTTCTACACCACCAGCATCTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189830.2
CDS-3UTR CCA 90 bp CACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTGCCAACTGGGCAGCGATaGCCTGAACCTGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: HLEGSWQLSTLSQSHQLLPTGQR*PEPGLQ
Trigger: CTGAAGACCAGGTTCAGGCCATCGCTGCCCAGTTGG...CAAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp GCTGAGCGGTACCAAGAGGAGCCTCTCCTTTTACTGGATGGAGAAATCGGGGACGCTGAAAGATGCTGGTaGTGTAGAAGGGAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: AERYQEEPLLLLDGEIGDAERCW*CRREAC
Trigger: GCACGCCTCCCTTCTACACCACCAGCATCTTTCAGC...GTCCCCGATTTCTCCATCCAGTAAAAGGAGAGGCTCCTCTTGGTACCGCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp CTGAGCGGTACCAAGAGGAGCCTCTCCTTTTACTGGATGGAGAAATCGGGGACCGTGGAAAGGAAGCTGTaGGACTGTCAGGCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: LSGTKRSLSFYWMEKSGTVERKL*DCQAVK
Trigger: CTTCACGGCCTGACAGTCCCACAGCTTCCTTTCCAC...GGTCCCCGATTTCTCCATCCAGTAAAAGGAGAGGCTCCTCTTGGTACCGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp AGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCACGGCTGGCTCACTTGTaGGGCTCCTGGTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SFSLGGELAAQHSFSVSSRLAHL*GSWWCV
Trigger: CACACACCACCAGGAGCCCCACAAGTGAGCCAGCCG...TGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp GCTGAGCGGTACCAAGAGGAGCCTCTCCTTTTACTGGATGGAGAAATCGGGGACTGGAGGCACAGGACATaGTGTCGCAGACCAGAGATG +
Preference number: 4 (lower is better)
Translates to: AERYQEEPLLLLDGEIGDWRHRT*CRRPEM
Trigger: CATCTCTGGTCTGCGACACCATGTCCTGTGCCTCCA...GTCCCCGATTTCTCCATCCAGTAAAAGGAGAGGCTCCTCTTGGTACCGCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp CACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTGATCCATTCCCGGGGCTaGAGGTCAAAGGTCACCCCT +
Preference number: 4 (lower is better)
Translates to: HLEGSWQLSTLSQSHQLLIHSRG*RSKVTP
Trigger: AGGGGTGACCTTTGACCTCCAGCCCCGGGAATGGAT...CAAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp TCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTAGAGCGGTGTGCCTTTaGTCGACGTCAGCACCATGG +
Preference number: 4 (lower is better)
Translates to: SLGGELAAQHSFSVSSALRAVCL*STSAPW
Trigger: CCATGGTGCTGACGTCGATCAAAGGCACACCGCTCT...AAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp TCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTACCAGCCAAGAGGCTTaGCTCCTGAGGAGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: SLGGELAAQHSFSVSSALTSQEA*LLRSGL
Trigger: AAGGCCACTCCTCAGGAGTCAAGCCTCTTGGCTGGT...AAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp AGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTTCAGGGTCAGCATaGGGACACTGCCATGCTGGG +
Preference number: 4 (lower is better)
Translates to: SFSLGGELAAQHSFSVSSASGSA*GHCHAG
Trigger: CCCAGCATGGCAGTGTCCTCATGCTGACCCTGAAGC...TGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp CACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTGGTGCAAGAAGCTGGGTaGAAGCAGGTGCTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: HLEGSWQLSTLSQSHQLLVQEAG*KQVLQG
Trigger: ACCCTGAAGCACCTGCTTTCACCCAGCTTCTTGCAC...CAAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp TTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTGGAGGTCAGAGATCATaGGGGGCTGGTCACTCAGGA +
Preference number: 4 (lower is better)
Translates to: FSLGGELAAQHSFSVSSAGGQRS*GAGHSG
Trigger: TCCTGAGTGACCAGCCCCTCATGATCTCTGACCTCC...AGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp GGAGGAAAGATCCCTACGTGTAGAGAGGAAGGGATTTTCTCTGGCACCAACAGTAGGCCTGGCGCAGGATaGGAGACTGGTTACCCTTGG +
Preference number: 4 (lower is better)
Translates to: GGKIPTCREEGIFSGTNSRPGAG*ETGYPW
Trigger: CCAAGGGTAACCAGTCTCGCATCCTGCGCCAGGCCT...ACTGTTGGTGCCAGAGAAAATCCCTTCCTCTCTACACGTAGGGATCTTTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR GCA 90 bp AGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAACTACATCAGTGCTCTaGCGGCCCATCGCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SFSLGGELAAQHSFSVSSTTSVL*RPIASG
Trigger: GCCAGAGGCGATGGGCCGGCAGAGCACTGATGTAGT...TGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp TTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTGATCCACTACATCAGTaGTCTGCCGGCCCATCGCCT +
Preference number: 4 (lower is better)
Translates to: FSLGGELAAQHSFSVSSADPLHQ*SAGPSP
Trigger: AGGCGATGGGCCGGCAGAGCACTGATGTAGTGGATC...AGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp GAGGAGCCTCTCCTTTTACTGGATGGAGAAATCGGGGACCTGGAAGCTTATCTCGCAGCTGACTCTGGATaGGCTGGCAGAAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: EEPLLLLDGEIGDLEAYLAADSG*AGRSQG
Trigger: ACCCTGACTTCTGCCAGCGCATCCAGAGTCAGCTGC...GAGATAAGCTTCCAGGTCCCCGATTTCTCCATCCAGTAAAAGGAGAGGCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR GCA 90 bp CTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTGTTGCTGCTGGATGCTaGTACTCTCCTGGCTGTACC +
Preference number: 4 (lower is better)
Translates to: LTWRGVGSSALFLSLISSVAAGC*YSPGCT
Trigger: GGTACAGCCAGGAGAGTAGCAGCATCCAGCAGCAAC...AGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR GCA 90 bp CTGAGCGGTACCAAGAGGAGCCTCTCCTTTTACTGGATGGAGAAATCGGGGACCAGCTGGTTGGCCAAATaGCAAGAGACCTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LSGTKRSLSFYWMEKSGTSWLAK*QETCSL
Trigger: CAAGGAGCAGGTCTCTTGGCATTTGGCCAACCAGCT...GGTCCCCGATTTCTCCATCCAGTAAAAGGAGAGGCTCCTCTTGGTACCGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR GCA 90 bp TTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCATGAGGACACTGCCATaGTGGGACAGGTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: FLTWRGVGSSALFLSLISMRTLP*WDRWLR
Trigger: CCTGAGCCACCTGTCCCAGCATGGCAGTGTCCTCAT...GCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp TCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTGCCTGGCTCAGGTGGTaGAAGAAGCTGGGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: SLGGELAAQHSFSVSSALAWLRW*KKLGES
Trigger: GCTTTCACCCAGCTTCTTGCACCACCTGAGCCAGGC...AAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp TCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTTCCCAGGAGCCCATATaGACGGACCCGCACAGTGTT +
Preference number: 4 (lower is better)
Translates to: SLGGELAAQHSFSVSSALSQEPI*TDPHSV
Trigger: AACACTGTGCGGGTCCGTGCATATGGGCTCCTGGGA...AAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp GTACTTAAGGCAAAAGTAGCCGGGCAGATTACAGGAGAGCCAGTAAGGCAGAGGCCTGGTAGGCTGCATTaGCCACAGCAAAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: VLKAKVAGQITGEPVRQRPGRLH*PQQSWH
Trigger: GTGCCAGCTTTGCTGTGGGCAATGCAGCCTACCAGG...CCTCTGCCTTACTGGCTCTCCTGTAATCTGCCCGGCTACTTTTGCCTTAAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR GCA 90 bp AGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGGTCATACTGGGCACTaGAGCTGCCAAGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SFSLGGELAAQHSFSVSSGHTGH*SCQGRS
Trigger: GGACCTGCCTTGGCAGCTGCAGTGCCCAGTATGACC...TGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp TTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCCAGAGGTCTGCGGTGTaGTCATATGGTCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FLTWRGVGSSALFLSLISQRSAV*SYGRSS
Trigger: GGAGGAGCGACCATATGACCACACCGCAGACCTCTG...GCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp GTACTTAAGGCAAAAGTAGCCGGGCAGATTACAGGAGAGCCAGTAAGGCAGAGGCTCTGGCCTCGGCTCTaGGAAGCCTTGTTCACACTC +
Preference number: 4 (lower is better)
Translates to: VLKAKVAGQITGEPVRQRLWPRL*EALFTL
Trigger: GAGTGTGAACAAGGCTTCCCAGAGCCGAGGCCAGAG...CCTCTGCCTTACTGGCTCTCCTGTAATCTGCCCGGCTACTTTTGCCTTAAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp GGTGTCAGAGAAGCTAGAAAAGGGCCCAAGCTTCCCACCCCTTACCTTGGGAGCAGAACCTTGAGAAGGTaGAGGCACAGGACATGGTGT +
Preference number: 4 (lower is better)
Translates to: GVREARKGPKLPTPYLGSRTLRR*RHRTWC
Trigger: ACACCATGTCCTGTGCCTCCACCTTCTCAAGGTTCT...GCTCCCAAGGTAAGGGGTGGGAAGCTTGGGCCCTTTTCTAGCTTCTCTGACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp TTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCATCCATTCCCGGGGCTaGAGGTCAAAGGTCACCCCT +
Preference number: 4 (lower is better)
Translates to: FLTWRGVGSSALFLSLISIHSRG*RSKVTP
Trigger: AGGGGTGACCTTTGACCTCCAGCCCCGGGAATGGAT...GCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp TCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGGGCGCCTGGCTCAGGTaGTGCAAGAAGCTGGGTGAA +
Preference number: 4 (lower is better)
Translates to: SLLVSHLEGSWQLSTLSQGAWLR*CKKLGE
Trigger: TTCACCCAGCTTCTTGCACCACCTGAGCCAGGCGCC...CTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp AGCACTCTTTCTCAGTCTCATCAGCTCTTGGCTGAGTTAGTAGCTTGGGTAGGATGCCCACAGCAAAGCTaGCACTGCGTCGCACGGCAG +
Preference number: 4 (lower is better)
Translates to: STLSQSHQLLAELVAWVGCPQQS*HCVARQ
Trigger: CTGCCGTGCGACGCAGTGCCAGCTTTGCTGTGGGCA...TCCTACCCAAGCTACTAACTCAGCCAAGAGCTGATGAGACTGAGAAAGAGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp CACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTGGCATCTCCAAGCAGCTaGGTCATACTGGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: HLEGSWQLSTLSQSHQLLASPSS*VILGTA
Trigger: TGCAGTGCCCAGTATGACCCAGCTGCTTGGAGATGC...CAAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp ACAGGGTACAGGGCTTCCGGTGTCAGAGAAGCTAGAAAAGGGCCCAAGCTTCCCAGCCGCTGGGGTACTTaGCACTTTAATAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: TGYRASGVREARKGPKLPSRWGT*HFNSSL
Trigger: CAAGGAGCTATTAAAGTGCCAAGTACCCCAGCGGCT...GGGAAGCTTGGGCCCTTTTCTAGCTTCTCTGACACCGGAAGCCCTGTACCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp CCTCCCATCAGCTGGGGACTGAACCCGAGCACCCCATACCTAGGAGCAAGCACTATTTCTAGGAGCCGCTaGGGTACTTGGCACTTTAAT +
Preference number: 4 (lower is better)
Translates to: PPISWGLNPSTPYLGASTISRSR*GTWHFN
Trigger: ATTAAAGTGCCAAGTACCCCAGCGGCTCCTAGAAAT...AGTGCTTGCTCCTAGGTATGGGGTGCTCGGGTTCAGTCCCCAGCTGATGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR TCA 90 bp CAATTCTCTAAACCAGGATCTTGTGTGAACAGGGTACAGGGCTTCCGGTGTCAGTGGGCAGCGATGGCCTaGACCTGGTCTTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: QFSKPGSCVNRVQGFRCQWAAMA*TWSSGS
Trigger: ACTTCCTGAAGACCAGGTTCAGGCCATCGCTGCCCA...CTGACACCGGAAGCCCTGTACCCTGTTCACACAAGATCCTGGTTTAGAGAATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR TCA 90 bp TCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTGGGCAGCGATGGCCTaGACCTGGTCTTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: SLLVSHLEGSWQLSTLSQWAAMA*TWSSGS
Trigger: ACTTCCTGAAGACCAGGTTCAGGCCATCGCTGCCCA...CTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp TTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCCCGGCAATAAAGGGGTaGTGTAAGAGGTCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: FLTWRGVGSSALFLSLISPAIKG*CKRSGQ
Trigger: CTGGCCAGACCTCTTACATCACCCCTTTATTGCCGG...GCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp TCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTTGGCTTCTTCAGCCATaGGTTTACAGGCCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: SLGGELAAQHSFSVSSALWLLQP*VYRPGA
Trigger: TGCGCCAGGCCTGTAAACTCATGGCTGAAGAAGCCA...AAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp TTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTGGCTTCTTCAGCCATaGGTTTACAGGCCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: FLTWRGVGSSALFLSLISWLLQP*VYRPGA
Trigger: TGCGCCAGGCCTGTAAACTCATGGCTGAAGAAGCCA...GCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp CTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTGCTGAAGCAGGAGAATaGGGAGGCCATCATAGAAGC +
Preference number: 4 (lower is better)
Translates to: LTWRGVGSSALFLSLISSAEAGE*GGHHRS
Trigger: GCTTCTATGATGGCCTCCTCATTCTCCTGCTTCAGC...AGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp TTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTGCCATGCCTTGGGGTaGAATCAGTGTCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: FLTWRGVGSSALFLSLISCHALG*NQCPVW
Trigger: CCAGACTGGACACTGATTTCACCCCAAGGCATGGCA...GCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp AAAATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCCGCCGGATCCCATCCTaGGCATCTCCAAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KISSSFSLGGELAAQHSFRRIPS*ASPSSW
Trigger: CCAGCTGCTTGGAGATGCTCAGGATGGGATCCGGCG...GAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp GGTGTCAGAGAAGCTAGAAAAGGGCCCAAGCTTCCCACCCCTTACCTTGGGAGCAAGCTGTCGAGCATATaGACAATGTTGGGATGCCAC +
Preference number: 4 (lower is better)
Translates to: GVREARKGPKLPTPYLGSKLSSI*TMLGCH
Trigger: GTGGCATCCCAACATTGTGCATATGCTCGACAGCTT...GCTCCCAAGGTAAGGGGTGGGAAGCTTGGGCCCTTTTCTAGCTTCTCTGACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR GCA 90 bp TTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCACAGACCAGAGGTCTaGGGTGTGGTCATATGGTCG +
Preference number: 4 (lower is better)
Translates to: FSLGGELAAQHSFSVSSAHRPEV*GVVIWS
Trigger: CGACCATATGACCACACCGCAGACCTCTGGTCTGTG...AGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp TCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTTGTAGAAGGGAGGCGTaGCGACAGCCAGCTCATACA +
Preference number: 4 (lower is better)
Translates to: SLGGELAAQHSFSVSSALCRREA*RQPAHT
Trigger: TGTATGAGCTGGCTGTCGGCACGCCTCCCTTCTACA...AAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp AGCACTCTTTCTCAGTCTCATCAGCTCTTGGCTGAGTTAGTAGCTTGGGTAGGAAGGCCTGGCGCAGGATaGGAGACTGGTTACCCTTGG +
Preference number: 4 (lower is better)
Translates to: STLSQSHQLLAELVAWVGRPGAG*ETGYPW
Trigger: CCAAGGGTAACCAGTCTCGCATCCTGCGCCAGGCCT...TCCTACCCAAGCTACTAACTCAGCCAAGAGCTGATGAGACTGAGAAAGAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp TCAAAGCACCTTGCTTTACCTCTGTTTAGCCCCAGTCGTGTCTGTATTAGCTCCACTACATCAGTGCTCTaGCGGCCCATCGCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SKHLALPLFSPSRVCISSTTSVL*RPIASG
Trigger: GCCAGAGGCGATGGGCCGGCAGAGCACTGATGTAGT...GGAGCTAATACAGACACGACTGGGGCTAAACAGAGGTAAAGCAAGGTGCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR GCA 90 bp AGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCAGCTGACTCTGGATaGGCTGGCAGAAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: SFSLGGELAAQHSFSVSSAADSG*AGRSQG
Trigger: ACCCTGACTTCTGCCAGCGCATCCAGAGTCAGCTGC...TGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp CTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTAGCTGGTTGGCCAAATaGCAAGAGACCTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LTWRGVGSSALFLSLISSSWLAK*QETCSL
Trigger: CAAGGAGCAGGTCTCTTGGCATTTGGCCAACCAGCT...AGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp CTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTATGAGGACACTGCCATaGTGGGACAGGTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LLVSHLEGSWQLSTLSQSMRTLP*WDRWLR
Trigger: CCTGAGCCACCTGTCCCAGCATGGCAGTGTCCTCAT...AGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp TCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTGGTGGCAGCAGACCTaGAGCAGGCAGACTACCACT +
Preference number: 4 (lower is better)
Translates to: SLLVSHLEGSWQLSTLSQWWQQT*SRQTTT
Trigger: AGTGGTAGTCTGCCTGCTGCAGGTCTGCTGCCACCA...CTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp CAATTCTCTAAACCAGGATCTTGTGTGAACAGGGTACAGGGCTTCCGGTGTCAGCCCAGCCTGGTAGGCTaGATTGCCCACAGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: QFSKPGSCVNRVQGFRCQPSLVG*IAHSKA
Trigger: AGCTTTGCTGTGGGCAATGCAGCCTACCAGGCTGGG...CTGACACCGGAAGCCCTGTACCCTGTTCACACAAGATCCTGGTTTAGAGAATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR GCA 90 bp CTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCCCAGCCTGGTAGGCTaGATTGCCCACAGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: LLVSHLEGSWQLSTLSQSPSLVG*IAHSKA
Trigger: AGCTTTGCTGTGGGCAATGCAGCCTACCAGGCTGGG...AGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp GGGGTCCTTGGTGAGCAGCCCCTGCAAGAAGTTCTTGAAGCAGGAACTAATGGTCTCCTCCACCAGCTCTaGAGACATATAGAGCGGTGT +
Preference number: 4 (lower is better)
Translates to: GVLGEQPLQEVLEAGTNGLLHQL*RHIERC
Trigger: ACACCGCTCTATATGTCTCCAGAGCTGGTGGAGGAG...ACCATTAGTTCCTGCTTCAAGAACTTCTTGCAGGGGCTGCTCACCAAGGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189830.2
CDS-3UTR CCA 90 bp CTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTTGCGGTGTGGTCATATaGTCGCTCCTCCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: LLVSHLEGSWQLSTLSQSCGVVI*SLLHQL
Trigger: GAGCTGGTGGAGGAGCGACCATATGACCACACCGCA...AGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp TCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTGCGGTGTGGTCATATaGTCGCTCCTCCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: SLLVSHLEGSWQLSTLSQCGVVI*SLLHQL
Trigger: GAGCTGGTGGAGGAGCGACCATATGACCACACCGCA...CTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp TCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTGCTGAAAGATGCTGGTaGTGTAGAAGGGAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: SLGGELAAQHSFSVSSALAERCW*CRREAC
Trigger: GCACGCCTCCCTTCTACACCACCAGCATCTTTCAGC...AAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp ACAGGGTACAGGGCTTCCGGTGTCAGAGAAGCTAGAAAAGGGCCCAAGCTTCCCGCAGATCCTGCATTTTaGTCTTCCTTCTGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: TGYRASGVREARKGPKLPADPAF*SSFCLA
Trigger: AGCCAAGCAGAAGGAAGACCAAAATGCAGGATCTGC...GGGAAGCTTGGGCCCTTTTCTAGCTTCTCTGACACCGGAAGCCCTGTACCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp TTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTGGAGGCACAGGACATaGTGTCGCAGACCAGAGATG +
Preference number: 4 (lower is better)
Translates to: FLTWRGVGSSALFLSLISWRHRT*CRRPEM
Trigger: CATCTCTGGTCTGCGACACCATGTCCTGTGCCTCCA...GCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp AGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCAGCCTCAGGGCCATaGAAAAGCGGTGCCACAGAA +
Preference number: 4 (lower is better)
Translates to: SFSLGGELAAQHSFSVSSAASGP*KSGATE
Trigger: TTCTGTGGCACCGCTTTTCCATGGCCCTGAGGCTGC...TGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp AGCACTCTTTCTCAGTCTCATCAGCTCTTGGCTGAGTTAGTAGCTTGGGTAGGAGGCGCCTGGCTCAGGTaGTGCAAGAAGCTGGGTGAA +
Preference number: 4 (lower is better)
Translates to: STLSQSHQLLAELVAWVGGAWLR*CKKLGE
Trigger: TTCACCCAGCTTCTTGCACCACCTGAGCCAGGCGCC...TCCTACCCAAGCTACTAACTCAGCCAAGAGCTGATGAGACTGAGAAAGAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp CACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTGTGGATAAAGGACAAGTaGCTGGGGGACAGAATCCGG +
Preference number: 4 (lower is better)
Translates to: HLEGSWQLSTLSQSHQLLWIKDK*LGDRIR
Trigger: CCGGATTCTGTCCCCCAGCCACTTGTCCTTTATCCA...CAAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp ATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGCAGCTGGGTCATACTaGGCACTGCAGCTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: ISSSFSLGGELAAQHSFSAAGSY*ALQLPR
Trigger: CCTTGGCAGCTGCAGTGCCCAGTATGACCCAGCTGC...TGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp CTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTAGCCTCTTTGACAGTTaGCTGAGGGTCTCCACATGC +
Preference number: 4 (lower is better)
Translates to: LTWRGVGSSALFLSLISSSLFDS*LRVSTC
Trigger: GCATGTGGAGACCCTCAGCCAACTGTCAAAGAGGCT...AGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp CACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTGTCATGTGCTGTGGGTTaGCCTCAGGAGTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: HLEGSWQLSTLSQSHQLLSCAVG*PQELDE
Trigger: CTCATCCAACTCCTGAGGCCAACCCACAGCACATGA...CAAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp TCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGCAGGTAGTACAGAGCTaGCACCAACTGGGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: SLLVSHLEGSWQLSTLSQQVVQS*HQLGSD
Trigger: ATCGCTGCCCAGTTGGTGTCAGCTCTGTACTACCTG...CTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp AGCACTCTTTCTCAGTCTCATCAGCTCTTGGCTGAGTTAGTAGCTTGGGTAGGAAGAGCGGTGTGCCTTTaGTCGACGTCAGCACCATGG +
Preference number: 4 (lower is better)
Translates to: STLSQSHQLLAELVAWVGRAVCL*STSAPW
Trigger: CCATGGTGCTGACGTCGATCAAAGGCACACCGCTCT...TCCTACCCAAGCTACTAACTCAGCCAAGAGCTGATGAGACTGAGAAAGAGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp AGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCATCATCCTTGAGGACCTaGAGTTCTGGGGGTAGGCGA +
Preference number: 4 (lower is better)
Translates to: SFSLGGELAAQHSFSVSSSSLRT*SSGGRR
Trigger: TCGCCTACCCCCAGAACTTCAGGTCCTCAAGGATGA...TGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp TACTGGATGGAGAAATCGGGGACCTGGAAGCTTATCTCAGTCAAGCTTCCTAATAGGCTGGCGGCCTCCTaGAACACCTGTAGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: YWMEKSGTWKLISVKLPNRLAAS*NTCRLS
Trigger: TGACAGCCTACAGGTGTTTCAGGAGGCCGCCAGCCT...ATTAGGAAGCTTGACTGAGATAAGCTTCCAGGTCCCCGATTTCTCCATCCAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR TCA 90 bp GACTGTATTATCTCAAAGCACCTTGCTTTACCTCTGTTTAGCCCCAGTCGTGTCGTCGCAGACCAGAGATaGGGGATGGCCTCAGTTGGC +
Preference number: 4 (lower is better)
Translates to: DCIISKHLALPLFSPSRVVADQR*GMASVG
Trigger: GCCAACTGAGGCCATCCCTCATCTCTGGTCTGCGAC...GACACGACTGGGGCTAAACAGAGGTAAAGCAAGGTGCTTTGAGATAATACAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR TCA 90 bp AGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAAGGCGTAGAGAACCTTaGGAAGGTGGAGGCACAGGA +
Preference number: 4 (lower is better)
Translates to: SFSLGGELAAQHSFSVSSRRREP*EGGGTG
Trigger: TCCTGTGCCTCCACCTTCTCAAGGTTCTCTACGCCT...TGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp GACTGTATTATCTCAAAGCACCTTGCTTTACCTCTGTTTAGCCCCAGTCGTGTCCCACTTCCGAGGCCCTaGGGTCAGCCAAGACACCTA +
Preference number: 4 (lower is better)
Translates to: DCIISKHLALPLFSPSRVPLPRP*GQPRHL
Trigger: TAGGTGTCTTGGCTGACCTCAGGGCCTCGGAAGTGG...GACACGACTGGGGCTAAACAGAGGTAAAGCAAGGTGCTTTGAGATAATACAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR GCA 90 bp CTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTTGTCGCGGTGTAGGATaGGGTGGGAATGCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: LLVSHLEGSWQLSTLSQSCRGVG*GGNAGS
Trigger: ACTACCTGCATTCCCACCGCATCCTACACCGCGACA...AGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp TCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTGGCAGACAAGGCATGTaGAGCTGCAGCAATCCATTC +
Preference number: 4 (lower is better)
Translates to: SLGGELAAQHSFSVSSALGRQGM*SCSNPF
Trigger: GAATGGATTGCTGCAGCTGCACATGCCTTGTCTGCC...AAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp AGCACTCTTTCTCAGTCTCATCAGCTCTTGGCTGAGTTAGTAGCTTGGGTAGGACCTGGTAGGCTGCATTaGCCACAGCAAAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: STLSQSHQLLAELVAWVGPGRLH*PQQSWH
Trigger: GTGCCAGCTTTGCTGTGGGCAATGCAGCCTACCAGG...TCCTACCCAAGCTACTAACTCAGCCAAGAGCTGATGAGACTGAGAAAGAGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp GGTGTCAGAGAAGCTAGAAAAGGGCCCAAGCTTCCCACCCCTTACCTTGGGAGCACTTTAATAGCTCCTTaGCCAATCCTTCAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: GVREARKGPKLPTPYLGSTLIAP*PILQVP
Trigger: TGGGACCTGAAGGATTGGGCAAGGAGCTATTAAAGT...GCTCCCAAGGTAAGGGGTGGGAAGCTTGGGCCCTTTTCTAGCTTCTCTGACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp CAGGTAGGCTACGAGCTGAGGAACCCCTCAACAATAGGGGTAATGACATTTATCCCAACTGGGCAGCGATaGCCTGAACCTGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: QVGYELRNPSTIGVMTFIPTGQR*PEPGLQ
Trigger: CTGAAGACCAGGTTCAGGCCATCGCTGCCCAGTTGG...GATAAATGTCATTACCCCTATTGTTGAGGGGTTCCTCAGCTCGTAGCCTACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp TTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCCTCCTCCACCAGCTCTaGAGACATATAGAGCGGTGT +
Preference number: 4 (lower is better)
Translates to: FLTWRGVGSSALFLSLISLLHQL*RHIERC
Trigger: ACACCGCTCTATATGTCTCCAGAGCTGGTGGAGGAG...GCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp ATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCACTCTGGCCTCGGCTCTaGGAAGCCTTGTTCACACTC +
Preference number: 4 (lower is better)
Translates to: ISSSFSLGGELAAQHSFSLWPRL*EALFTL
Trigger: GAGTGTGAACAAGGCTTCCCAGAGCCGAGGCCAGAG...TGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp TCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGGGTCCAAAAAGAGGCTaGCGGCCTCCTGAAACACCT +
Preference number: 4 (lower is better)
Translates to: SLLVSHLEGSWQLSTLSQGPKRG*RPPETP
Trigger: AGGTGTTTCAGGAGGCCGCCAGCCTCTTTTTGGACC...CTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp CTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTTTGTGGGGCTCCTGGTaGTGTGTGGAAAGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LLVSHLEGSWQLSTLSQSLWGSW*CVERKL
Trigger: CAGCTTCCTTTCCACACACCACCAGGAGCCCCACAA...AGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp CTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCACTTGTGGGGCTCCTaGTGGTGTGTGGAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LLVSHLEGSWQLSTLSQSHLWGS*WCVERK
Trigger: CTTCCTTTCCACACACCACCAGGAGCCCCACAAGTG...AGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp TCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGCACTTGTGGGGCTCCTaGTGGTGTGTGGAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: SLLVSHLEGSWQLSTLSQHLWGS*WCVERK
Trigger: CTTCCTTTCCACACACCACCAGGAGCCCCACAAGTG...CTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp TTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCCAGGGCAGAAGAGATaGCTCCAGGTACATCTTCAC +
Preference number: 4 (lower is better)
Translates to: FSLGGELAAQHSFSVSSAPGQKR*LQVHLH
Trigger: GTGAAGATGTACCTGGAGCCATCTCTTCTGCCCTGG...AGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp GGAGGAAAGATCCCTACGTGTAGAGAGGAAGGGATTTTCTCTGGCACCAACAGTAAGAGACCTGCTCCTTaGCATCCCAACAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GGKIPTCREEGIFSGTNSKRPAP*HPNSWA
Trigger: TGCCCAGCTGTTGGGATGCCAAGGAGCAGGTCTCTT...ACTGTTGGTGCCAGAGAAAATCCCTTCCTCTCTACACGTAGGGATCTTTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp GAGGAGCCTCTCCTTTTACTGGATGGAGAAATCGGGGACCTGGAAGCTTATCTCAGGGATGGCCTCAGTTaGCTGCTGTCTTCAGTTAGC +
Preference number: 4 (lower is better)
Translates to: EEPLLLLDGEIGDLEAYLRDGLS*LLSSVS
Trigger: GCTAACTGAAGACAGCAGCCAACTGAGGCCATCCCT...GAGATAAGCTTCCAGGTCCCCGATTTCTCCATCCAGTAAAAGGAGAGGCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp CTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTCCTGAAGGCAGATCTTaGAGCCGAAAGACAAGAAGG +
Preference number: 4 (lower is better)
Translates to: LTWRGVGSSALFLSLISSPEGRS*SRKTRR
Trigger: CCTTCTTGTCTTTCGGCTCCAAGATCTGCCTTCAGG...AGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp TCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTAAGGCTGCCATGCCTTaGGGTGAAATCAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SLGGELAAQHSFSVSSALKAAMP*GEISVQ
Trigger: CTGGACACTGATTTCACCCCAAGGCATGGCAGCCTT...AAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp AGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAAACAACGAAAGGTGGTaGCAGCAGACCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SFSLGGELAAQHSFSVSSNNERW*QQTCSR
Trigger: CCTGCTGCAGGTCTGCTGCCACCACCTTTCGTTGTT...TGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp CAATTCTCTAAACCAGGATCTTGTGTGAACAGGGTACAGGGCTTCCGGTGTCAGGCATCTCCAAGCAGCTaGGTCATACTGGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: QFSKPGSCVNRVQGFRCQASPSS*VILGTA
Trigger: TGCAGTGCCCAGTATGACCCAGCTGCTTGGAGATGC...CTGACACCGGAAGCCCTGTACCCTGTTCACACAAGATCCTGGTTTAGAGAATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR TCA 90 bp AAATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTGCCCCAGTTTGGGGATaGACTTCAAGGCCACCACCT +
Preference number: 4 (lower is better)
Translates to: KSLLVSHLEGSWQLSTLSAPVWG*TSRPPP
Trigger: AGGTGGTGGCCTTGAAGTTCATCCCCAAACTGGGGC...AGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp AAATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCCTCAGCTCTTTCTCTaGGCGCCCCAGTTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: KSLLVSHLEGSWQLSTLSPQLFL*APQFGD
Trigger: ATCCCCAAACTGGGGCGCTCAGAGAAAGAGCTGAGG...AGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp CAATTCTCTAAACCAGGATCTTGTGTGAACAGGGTACAGGGCTTCCGGTGTCAGGCCACAGACCCCGCATaGTTTCAATCTCTCGTTGCA +
Preference number: 4 (lower is better)
Translates to: QFSKPGSCVNRVQGFRCQATDPA*FQSLVA
Trigger: TGCAACGAGAGATTGAAATCATGCGGGGTCTGTGGC...CTGACACCGGAAGCCCTGTACCCTGTTCACACAAGATCCTGGTTTAGAGAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR TCA 90 bp AGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTGAAGCAGGAGAATaGGGAGGCCATCATAGAAGC +
Preference number: 4 (lower is better)
Translates to: SFSLGGELAAQHSFSVSSAEAGE*GGHHRS
Trigger: GCTTCTATGATGGCCTCCTCATTCTCCTGCTTCAGC...TGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp TTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCACCTGCATAAGAAGCTaGAGCAGGAGAATGAGGAGG +
Preference number: 4 (lower is better)
Translates to: FLTWRGVGSSALFLSLISTCIRS*SRRMRR
Trigger: CCTCCTCATTCTCCTGCTTCAGCTTCTTATGCAGGT...GCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp AGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCACTAGCAGCAGAAGGTTaGGCAGTCCTGACTGACTCT +
Preference number: 4 (lower is better)
Translates to: SFSLGGELAAQHSFSVSSLAAEG*AVLTDS
Trigger: AGAGTCAGTCAGGACTGCTCAACCTTCTGCTGCTAG...TGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp TCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGCTAGCAGCAGAAGGTTaGGCAGTCCTGACTGACTCT +
Preference number: 4 (lower is better)
Translates to: SLLVSHLEGSWQLSTLSQLAAEG*AVLTDS
Trigger: AGAGTCAGTCAGGACTGCTCAACCTTCTGCTGCTAG...CTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp CACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTGCTGCTACTTTCACCTTaGCCTGGACTAACATCAGCA +
Preference number: 4 (lower is better)
Translates to: HLEGSWQLSTLSQSHQLLLLLSP*PGLTSA
Trigger: TGCTGATGTTAGTCCAGGGCAAGGTGAAAGTAGCAG...CAAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp TCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGGGCAGACAAGGCATGTaGAGCTGCAGCAATCCATTC +
Preference number: 4 (lower is better)
Translates to: SLLVSHLEGSWQLSTLSQGRQGM*SCSNPF
Trigger: GAATGGATTGCTGCAGCTGCACATGCCTTGTCTGCC...CTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp TACTGGATGGAGAAATCGGGGACCTGGAAGCTTATCTCAGTCAAGCTTCCTAATGCCTGGCTCAGGTGGTaGAAGAAGCTGGGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: YWMEKSGTWKLISVKLPNAWLRW*KKLGES
Trigger: GCTTTCACCCAGCTTCTTGCACCACCTGAGCCAGGC...ATTAGGAAGCTTGACTGAGATAAGCTTCCAGGTCCCCGATTTCTCCATCCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR GCA 90 bp ATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAAGTGGCCTAGGAGGCTaGGCAATGGCCGATAGGATT +
Preference number: 4 (lower is better)
Translates to: ISSSFSLGGELAAQHSFSSGLGG*AMADRI
Trigger: AATCCTATCGGCCATTGCGCAGCCTCCTAGGCCACT...TGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp TACTGGATGGAGAAATCGGGGACCTGGAAGCTTATCTCAGTCAAGCTTCCTAATTCCCAGGAGCCCATATaGACGGACCCGCACAGTGTT +
Preference number: 4 (lower is better)
Translates to: YWMEKSGTWKLISVKLPNSQEPI*TDPHSV
Trigger: AACACTGTGCGGGTCCGTGCATATGGGCTCCTGGGA...ATTAGGAAGCTTGACTGAGATAAGCTTCCAGGTCCCCGATTTCTCCATCCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR GCA 90 bp TCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTCTTCAGGTCCCAGATTaGCTAGAGCTGATGCAGCAT +
Preference number: 4 (lower is better)
Translates to: SLGGELAAQHSFSVSSALLQVPD*LELMQH
Trigger: ATGCTGCATCAGCTCTAGGCAATCTGGGACCTGAAG...AAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp AAATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGAGGTCTGCGGTGTaGTCATATGGTCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KSLLVSHLEGSWQLSTLSQRSAV*SYGRSS
Trigger: GGAGGAGCGACCATATGACCACACCGCAGACCTCTG...AGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp CGTGTAGAGAGGAAGGGATTTTCTCTGGCACCAACAGTGATGAAGTTTACTGATCGCAGGATGCGAGACTaGTTACCCTTGGGTGCGAGC +
Preference number: 4 (lower is better)
Translates to: RVERKGFSLAPTVMKFTDRRMRD*LPLGAS
Trigger: GCTCGCACCCAAGGGTAACCAGTCTCGCATCCTGCG...ATCAGTAAACTTCATCACTGTTGGTGCCAGAGAAAATCCCTTCCTCTCTACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp AGCACTCTTTCTCAGTCTCATCAGCTCTTGGCTGAGTTAGTAGCTTGGGTAGGAGTGGAAAGGAAGCTGTaGGACTGTCAGGCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: STLSQSHQLLAELVAWVGVERKL*DCQAVK
Trigger: CTTCACGGCCTGACAGTCCCACAGCTTCCTTTCCAC...TCCTACCCAAGCTACTAACTCAGCCAAGAGCTGATGAGACTGAGAAAGAGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp ATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGCTCCTGGTGGTGTGTaGAAAGGAAGCTGTGGGACT +
Preference number: 4 (lower is better)
Translates to: ISSSFSLGGELAAQHSFSAPGGV*KGSCGT
Trigger: AGTCCCACAGCTTCCTTTCCACACACCACCAGGAGC...TGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp AGCACTCTTTCTCAGTCTCATCAGCTCTTGGCTGAGTTAGTAGCTTGGGTAGGATTGTGGGGCTCCTGGTaGTGTGTGGAAAGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: STLSQSHQLLAELVAWVGLWGSW*CVERKL
Trigger: CAGCTTCCTTTCCACACACCACCAGGAGCCCCACAA...TCCTACCCAAGCTACTAACTCAGCCAAGAGCTGATGAGACTGAGAAAGAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp TCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGAGCGGTGCCACAGAATaGTCCACACCTCTGAACCAA +
Preference number: 4 (lower is better)
Translates to: SLLVSHLEGSWQLSTLSQSGATE*STPLNQ
Trigger: TTGGTTCAGAGGTGTGGACCATTCTGTGGCACCGCT...CTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp CCAAGAGGAGCCTCTCCTTTTACTGGATGGAGAAATCGGGGACCTGGAAGCTTAAGTCTGGCTCTAGGCTaGAGGGACTTGATAGTAGCA +
Preference number: 4 (lower is better)
Translates to: PRGASPFTGWRNRGPGSLSLALG*RDLIVA
Trigger: TGCTACTATCAAGTCCCTCCAGCCTAGAGCCAGACT...TAAGCTTCCAGGTCCCCGATTTCTCCATCCAGTAAAAGGAGAGGCTCCTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp TCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTAGTCTGGCTCTAGGCTaGAGGGACTTGATAGTAGCA +
Preference number: 4 (lower is better)
Translates to: SLGGELAAQHSFSVSSALSLALG*RDLIVA
Trigger: TGCTACTATCAAGTCCCTCCAGCCTAGAGCCAGACT...AAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp AAAATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCCCATGCTGGGACAGGTaGCTCAGGCATAACTGGGAC +
Preference number: 4 (lower is better)
Translates to: KISSSFSLGGELAAQHSFPCWDR*LRHNWD
Trigger: GTCCCAGTTATGCCTGAGCCACCTGTCCCAGCATGG...GAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp TTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCCAGACAGGAGCTCTTaGATAAAGGACAAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: FSLGGELAAQHSFSVSSAPDRSS*IKDKWL
Trigger: CAGCCACTTGTCCTTTATCCAAGAGCTCCTGTCTGG...AGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp TTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTAGCCGCTGGGGTACTTaGCACTTTAATAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: FSLGGELAAQHSFSVSSASRWGT*HFNSSL
Trigger: CAAGGAGCTATTAAAGTGCCAAGTACCCCAGCGGCT...AGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp CTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTAGCCTCTTTGACAGTTaGCTGAGGGTCTCCACATGC +
Preference number: 4 (lower is better)
Translates to: LLVSHLEGSWQLSTLSQSSLFDS*LRVSTC
Trigger: GCATGTGGAGACCCTCAGCCAACTGTCAAAGAGGCT...AGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp AGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCATCATGTGCTGTGGGTTaGCCTCAGGAGTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: SFSLGGELAAQHSFSVSSSCAVG*PQELDE
Trigger: CTCATCCAACTCCTGAGGCCAACCCACAGCACATGA...TGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp AAATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGGTAGTACAGAGCTaGCACCAACTGGGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: KSLLVSHLEGSWQLSTLSQVVQS*HQLGSD
Trigger: ATCGCTGCCCAGTTGGTGTCAGCTCTGTACTACCTG...AGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp TACTGGATGGAGAAATCGGGGACCTGGAAGCTTATCTCAGTCAAGCTTCCTAATTCATCCTTGAGGACCTaGAGTTCTGGGGGTAGGCGA +
Preference number: 4 (lower is better)
Translates to: YWMEKSGTWKLISVKLPNSSLRT*SSGGRR
Trigger: TCGCCTACCCCCAGAACTTCAGGTCCTCAAGGATGA...ATTAGGAAGCTTGACTGAGATAAGCTTCCAGGTCCCCGATTTCTCCATCCAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR TCA 90 bp AGCACTCTTTCTCAGTCTCATCAGCTCTTGGCTGAGTTAGTAGCTTGGGTAGGAAAGGTCACCCCTTGCTaGCCAAGCTGTCCTAAGAGA +
Preference number: 4 (lower is better)
Translates to: STLSQSHQLLAELVAWVGKVTPC*PSCPKR
Trigger: TCTCTTAGGACAGCTTGGTCAGCAAGGGGTGACCTT...TCCTACCCAAGCTACTAACTCAGCCAAGAGCTGATGAGACTGAGAAAGAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp GACTGTATTATCTCAAAGCACCTTGCTTTACCTCTGTTTAGCCCCAGTCGTGTCGTGCAAGAAGCTGGGTaGAAGCAGGTGCTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: DCIISKHLALPLFSPSRVVQEAG*KQVLQG
Trigger: ACCCTGAAGCACCTGCTTTCACCCAGCTTCTTGCAC...GACACGACTGGGGCTAAACAGAGGTAAAGCAAGGTGCTTTGAGATAATACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR TCA 90 bp AAATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTTTGAGCAGTCCTGACTaGCTCTGTAGTGCCCCACGT +
Preference number: 4 (lower is better)
Translates to: KSLLVSHLEGSWQLSTLSLSSPD*LCSAPR
Trigger: ACGTGGGGCACTACAGAGTCAGTCAGGACTGCTCAA...AGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp TCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTTTGACAGTTGGCTaGGGGTCTCCACATGCCATT +
Preference number: 4 (lower is better)
Translates to: SLLVSHLEGSWQLSTLSQSLTVG*GSPHAI
Trigger: AATGGCATGTGGAGACCCTCAGCCAACTGTCAAAGA...CTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp AGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCATGCACAATGTTGGGATaGCACAGACCCCGCATGATT +
Preference number: 4 (lower is better)
Translates to: SFSLGGELAAQHSFSVSSCTMLG*HRPRMI
Trigger: AATCATGCGGGGTCTGTGGCATCCCAACATTGTGCA...TGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp AAATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTTGTCGCGGTGTAGGATaGGGTGGGAATGCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: KSLLVSHLEGSWQLSTLSCRGVG*GGNAGS
Trigger: ACTACCTGCATTCCCACCGCATCCTACACCGCGACA...AGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp TTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCGTCTCTAGTAGGCGTTaGCACTCATCATCACTGTCT +
Preference number: 4 (lower is better)
Translates to: FLTWRGVGSSALFLSLISVSSRR*HSSSLS
Trigger: AGACAGTGATGATGAGTGGCAACGCCTACTAGAGAC...GCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp AGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAATGGCCTCAGTTGGCTaGTGTCTTCAGTTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SFSLGGELAAQHSFSVSSMASVG*CLQLAG
Trigger: ACCAGCTAACTGAAGACAGCAGCCAACTGAGGCCAT...TGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp CTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTGGACTCTTCCCAATCTaGTACTTTCACCTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: LLVSHLEGSWQLSTLSQSGLFPI*YFHLAL
Trigger: CAGGGCAAGGTGAAAGTAGCAGATTGGGAAGAGTCC...AGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp CGTGTAGAGAGGAAGGGATTTTCTCTGGCACCAACAGTGATGAAGTTTACTGATGAGCTGATGCAGCATTaGGCCGGATCCCATCCTGAG +
Preference number: 4 (lower is better)
Translates to: RVERKGFSLAPTVMKFTDELMQH*AGSHPE
Trigger: CTCAGGATGGGATCCGGCGCAATGCTGCATCAGCTC...ATCAGTAAACTTCATCACTGTTGGTGCCAGAGAAAATCCCTTCCTCTCTACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR GCA 90 bp CTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTACTTTAATAGCTCCTTaGCCAATCCTTCAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: LTWRGVGSSALFLSLISSTLIAP*PILQVP
Trigger: TGGGACCTGAAGGATTGGGCAAGGAGCTATTAAAGT...AGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp TCAAAGCACCTTGCTTTACCTCTGTTTAGCCCCAGTCGTGTCTGTATTAGCTCCGCATATGCACAATGTTaGGATGCCACAGACCCCGCA +
Preference number: 4 (lower is better)
Translates to: SKHLALPLFSPSRVCISSAYAQC*DATDPA
Trigger: TGCGGGGTCTGTGGCATCCCAACATTGTGCATATGC...GGAGCTAATACAGACACGACTGGGGCTAAACAGAGGTAAAGCAAGGTGCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp AGCACTCTTTCTCAGTCTCATCAGCTCTTGGCTGAGTTAGTAGCTTGGGTAGGAGCATATGCACAATGTTaGGATGCCACAGACCCCGCA +
Preference number: 4 (lower is better)
Translates to: STLSQSHQLLAELVAWVGAYAQC*DATDPA
Trigger: TGCGGGGTCTGTGGCATCCCAACATTGTGCATATGC...TCCTACCCAAGCTACTAACTCAGCCAAGAGCTGATGAGACTGAGAAAGAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp TTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTGCAGATCCTGCATTTTaGTCTTCCTTCTGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: FSLGGELAAQHSFSVSSAADPAF*SSFCLA
Trigger: AGCCAAGCAGAAGGAAGACCAAAATGCAGGATCTGC...AGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp AAATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTGGCAGTCCTGCCTCCTaGCAGAAGGAATACAAGAGC +
Preference number: 4 (lower is better)
Translates to: KSLLVSHLEGSWQLSTLSGSPAS*QKEYKS
Trigger: GCTCTTGTATTCCTTCTGCCAGGAGGCAGGACTGCC...AGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp AAATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTGCTCCTGGTGGTGTGTaGAAAGGAAGCTGTGGGACT +
Preference number: 4 (lower is better)
Translates to: KSLLVSHLEGSWQLSTLSAPGGV*KGSCGT
Trigger: AGTCCCACAGCTTCCTTTCCACACACCACCAGGAGC...AGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp AAATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTAAGAGACCTGCTCCTTaGCATCCCAACAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: KSLLVSHLEGSWQLSTLSKRPAP*HPNSWA
Trigger: TGCCCAGCTGTTGGGATGCCAAGGAGCAGGTCTCTT...AGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp ATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAAGGGATGGCCTCAGTTaGCTGCTGTCTTCAGTTAGC +
Preference number: 4 (lower is better)
Translates to: ISSSFSLGGELAAQHSFSRDGLS*LLSSVS
Trigger: GCTAACTGAAGACAGCAGCCAACTGAGGCCATCCCT...TGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp CTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTAGAACCTTGAGAAGGTaGAGGCACAGGACATGGTGT +
Preference number: 4 (lower is better)
Translates to: LLVSHLEGSWQLSTLSQSRTLRR*RHRTWC
Trigger: ACACCATGTCCTGTGCCTCCACCTTCTCAAGGTTCT...AGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp CTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCCTGAAGGCAGATCTTaGAGCCGAAAGACAAGAAGG +
Preference number: 4 (lower is better)
Translates to: LLVSHLEGSWQLSTLSQSPEGRS*SRKTRR
Trigger: CCTTCTTGTCTTTCGGCTCCAAGATCTGCCTTCAGG...AGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp ATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCATGGCTCAGGCATAACTaGGACTCCTGGGTGAAGATG +
Preference number: 4 (lower is better)
Translates to: ISSSFSLGGELAAQHSFSWLRHN*DSWVKM
Trigger: CATCTTCACCCAGGAGTCCCAGTTATGCCTGAGCCA...TGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp CTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTATTTCTAGGAGCCGCTaGGGTACTTGGCACTTTAAT +
Preference number: 4 (lower is better)
Translates to: LTWRGVGSSALFLSLISSISRSR*GTWHFN
Trigger: ATTAAAGTGCCAAGTACCCCAGCGGCTCCTAGAAAT...AGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp CTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTAAGAGAGACGACATGTaGGTGGGTAAAGAGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LLVSHLEGSWQLSTLSQSKRDDM*VGKESS
Trigger: GCTACTCTCTTTACCCACTCACATGTCGTCTCTCTT...AGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp AAATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTAAGGTCACCCCTTGCTaGCCAAGCTGTCCTAAGAGA +
Preference number: 4 (lower is better)
Translates to: KSLLVSHLEGSWQLSTLSKVTPC*PSCPKR
Trigger: TCTCTTAGGACAGCTTGGTCAGCAAGGGGTGACCTT...AGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp CAGGTAGGCTACGAGCTGAGGAACCCCTCAACAATAGGGGTAATGACATTTATCACCTGCATAAGAAGCTaGAGCAGGAGAATGAGGAGG +
Preference number: 4 (lower is better)
Translates to: QVGYELRNPSTIGVMTFITCIRS*SRRMRR
Trigger: CCTCCTCATTCTCCTGCTTCAGCTTCTTATGCAGGT...GATAAATGTCATTACCCCTATTGTTGAGGGGTTCCTCAGCTCGTAGCCTACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR TCA 90 bp ATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCATCTTTGACAGTTGGCTaGGGGTCTCCACATGCCATT +
Preference number: 4 (lower is better)
Translates to: ISSSFSLGGELAAQHSFSSLTVG*GSPHAI
Trigger: AATGGCATGTGGAGACCCTCAGCCAACTGTCAAAGA...TGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp AGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGTCTCTAGTAGGCGTTaGCACTCATCATCACTGTCT +
Preference number: 4 (lower is better)
Translates to: SFSLGGELAAQHSFSVSSVSSRR*HSSSLS
Trigger: AGACAGTGATGATGAGTGGCAACGCCTACTAGAGAC...TGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp CGTGTAGAGAGGAAGGGATTTTCTCTGGCACCAACAGTGATGAAGTTTACTGATCAGCTCAGGCAGTCCTaGCTCCTGGCAGAAGGAATA +
Preference number: 4 (lower is better)
Translates to: RVERKGFSLAPTVMKFTDQLRQS*LLAEGI
Trigger: TATTCCTTCTGCCAGGAGGCAGGACTGCCTGAGCTG...ATCAGTAAACTTCATCACTGTTGGTGCCAGAGAAAATCCCTTCCTCTCTACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR GCA 90 bp AAAATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCGGACAGGAGGTAAAGTaGCACCTCAGTGGACTCTTC +
Preference number: 4 (lower is better)
Translates to: KISSSFSLGGELAAQHSFGQEVK*HLSGLF
Trigger: GAAGAGTCCACTGAGGTGGCACTTTACCTCCTGTCC...GAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp TTCCTAATACACATGCAGTTAGATTCTAATGTGTCTGCCCAACGACCTTTCAGGTGGTGGCAGCAGACCTaGAGCAGGCAGACTACCACT +
Preference number: 4 (lower is better)
Translates to: FLIHMQLDSNVSAQRPFRWWQQT*SRQTTT
Trigger: AGTGGTAGTCTGCCTGCTGCAGGTCTGCTGCCACCA...CCTGAAAGGTCGTTGGGCAGACACATTAGAATCTAACTGCATGTGTATTAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR GCA 90 bp CGTGTAGAGAGGAAGGGATTTTCTCTGGCACCAACAGTGATGAAGTTTACTGATAGTGGCCTAGGAGGCTaGGCAATGGCCGATAGGATT +
Preference number: 4 (lower is better)
Translates to: RVERKGFSLAPTVMKFTDSGLGG*AMADRI
Trigger: AATCCTATCGGCCATTGCGCAGCCTCCTAGGCCACT...ATCAGTAAACTTCATCACTGTTGGTGCCAGAGAAAATCCCTTCCTCTCTACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR GCA 90 bp ATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCACTTCAGGTCCCAGATTaGCTAGAGCTGATGCAGCAT +
Preference number: 4 (lower is better)
Translates to: ISSSFSLGGELAAQHSFSLQVPD*LELMQH
Trigger: ATGCTGCATCAGCTCTAGGCAATCTGGGACCTGAAG...TGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp AAAATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCCTCCTCCACCAGCTCTaGAGACATATAGAGCGGTGT +
Preference number: 4 (lower is better)
Translates to: KISSSFSLGGELAAQHSFLLHQL*RHIERC
Trigger: ACACCGCTCTATATGTCTCCAGAGCTGGTGGAGGAG...GAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp CAGGTAGGCTACGAGCTGAGGAACCCCTCAACAATAGGGGTAATGACATTTATCGTGTGGTCAACAGGCTaGAGTAGAAGGCTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: QVGYELRNPSTIGVMTFIVWSTG*SRRLWR
Trigger: TCTCCAAAGCCTTCTACTCCAGCCTGTTGACCACAC...GATAAATGTCATTACCCCTATTGTTGAGGGGTTCCTCAGCTCGTAGCCTACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp ATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTGTGGTCAACAGGCTaGAGTAGAAGGCTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: ISSSFSLGGELAAQHSFSVWSTG*SRRLWR
Trigger: TCTCCAAAGCCTTCTACTCCAGCCTGTTGACCACAC...TGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp GACTGTATTATCTCAAAGCACCTTGCTTTACCTCTGTTTAGCCCCAGTCGTGTCCCAGGGCAGAAGAGATaGCTCCAGGTACATCTTCAC +
Preference number: 4 (lower is better)
Translates to: DCIISKHLALPLFSPSRVPGQKR*LQVHLH
Trigger: GTGAAGATGTACCTGGAGCCATCTCTTCTGCCCTGG...GACACGACTGGGGCTAAACAGAGGTAAAGCAAGGTGCTTTGAGATAATACAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp AGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCACTTCAGTTAGCTGGTTaGCCAAATGCCAAGAGACCT +
Preference number: 4 (lower is better)
Translates to: SFSLGGELAAQHSFSVSSLQLAG*PNAKRP
Trigger: AGGTCTCTTGGCATTTGGCCAACCAGCTAACTGAAG...TGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp TCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGCTTCAGTTAGCTGGTTaGCCAAATGCCAAGAGACCT +
Preference number: 4 (lower is better)
Translates to: SLLVSHLEGSWQLSTLSQLQLAG*PNAKRP
Trigger: AGGTCTCTTGGCATTTGGCCAACCAGCTAACTGAAG...CTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp GACTGTATTATCTCAAAGCACCTTGCTTTACCTCTGTTTAGCCCCAGTCGTGTCAGCGGTGCCACAGAATaGTCCACACCTCTGAACCAA +
Preference number: 4 (lower is better)
Translates to: DCIISKHLALPLFSPSRVSGATE*STPLNQ
Trigger: TTGGTTCAGAGGTGTGGACCATTCTGTGGCACCGCT...GACACGACTGGGGCTAAACAGAGGTAAAGCAAGGTGCTTTGAGATAATACAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp AAAATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCGGTGGTGCAAGAAGCTaGGTGAAAGCAGGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: KISSSFSLGGELAAQHSFGGARS*VKAGAS
Trigger: TGAAGCACCTGCTTTCACCCAGCTTCTTGCACCACC...GAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp GACTGTATTATCTCAAAGCACCTTGCTTTACCTCTGTTTAGCCCCAGTCGTGTCGTTGGCCTCAGGAGTTaGATGAGCTTCCTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: DCIISKHLALPLFSPSRVVGLRS*MSFLQC
Trigger: ACACTGCAGGAAGCTCATCCAACTCCTGAGGCCAAC...GACACGACTGGGGCTAAACAGAGGTAAAGCAAGGTGCTTTGAGATAATACAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp AAATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTGTTGGCCTCAGGAGTTaGATGAGCTTCCTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: KSLLVSHLEGSWQLSTLSVGLRS*MSFLQC
Trigger: ACACTGCAGGAAGCTCATCCAACTCCTGAGGCCAAC...AGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp TCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTGTTGTTCTTCATTTCTaGAGCCAGTATACCAGCCAA +
Preference number: 4 (lower is better)
Translates to: SLGGELAAQHSFSVSSALVVLHF*SQYTSQ
Trigger: TTGGCTGGTATACTGGCTTCAGAAATGAAGAACAAC...AAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp CAGGTAGGCTACGAGCTGAGGAACCCCTCAACAATAGGGGTAATGACATTTATCAAGAGAGACGACATGTaGGTGGGTAAAGAGAGTAGC +
Preference number: 4 (lower is better)
Translates to: QVGYELRNPSTIGVMTFIKRDDM*VGKESS
Trigger: GCTACTCTCTTTACCCACTCACATGTCGTCTCTCTT...GATAAATGTCATTACCCCTATTGTTGAGGGGTTCCTCAGCTCGTAGCCTACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR TCA 90 bp TTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCAACAACAGAGAGGAATaGGATGATGGCTCTAGAAGA +
Preference number: 4 (lower is better)
Translates to: FLTWRGVGSSALFLSLISNNREE*DDGSRR
Trigger: TCTTCTAGAGCCATCATCTCATTCCTCTCTGTTGTT...GCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp AAAATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTGCACAATGTTGGGATaGCACAGACCCCGCATGATT +
Preference number: 4 (lower is better)
Translates to: KISSSFSLGGELAAQHSFCTMLG*HRPRMI
Trigger: AATCATGCGGGGTCTGTGGCATCCCAACATTGTGCA...GAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp AAAATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTTGGTGAGCAGCCCCTaGAAGAAGTTCTTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: KISSSFSLGGELAAQHSFLVSSP*KKFLKQ
Trigger: CTGCTTCAAGAACTTCTTGCAGGGGCTGCTCACCAA...GAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp AGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCATTTTGGTCTTCCTTCTaGTTGGCTTCTTCAGCCATG +
Preference number: 4 (lower is better)
Translates to: SFSLGGELAAQHSFSVSSFWSSF*LASSAM
Trigger: CATGGCTGAAGAAGCCAAGCAGAAGGAAGACCAAAA...TGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp TCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTTCAAGGGCAGATCCTaGATTTTGGTCTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SLLVSHLEGSWQLSTLSQFKGRS*ILVFLL
Trigger: CAGAAGGAAGACCAAAATGCAGGATCTGCCCTTGAA...CTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp AGCACTCTTTCTCAGTCTCATCAGCTCTTGGCTGAGTTAGTAGCTTGGGTAGGACTGCTACTTTCACCTTaGCCTGGACTAACATCAGCA +
Preference number: 4 (lower is better)
Translates to: STLSQSHQLLAELVAWVGLLLSP*PGLTSA
Trigger: TGCTGATGTTAGTCCAGGGCAAGGTGAAAGTAGCAG...TCCTACCCAAGCTACTAACTCAGCCAAGAGCTGATGAGACTGAGAAAGAGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp CGTGTAGAGAGGAAGGGATTTTCTCTGGCACCAACAGTGATGAAGTTTACTGATGGACAGGAGGTAAAGTaGCACCTCAGTGGACTCTTC +
Preference number: 4 (lower is better)
Translates to: RVERKGFSLAPTVMKFTDGQEVK*HLSGLF
Trigger: GAAGAGTCCACTGAGGTGGCACTTTACCTCCTGTCC...ATCAGTAAACTTCATCACTGTTGGTGCCAGAGAAAATCCCTTCCTCTCTACACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR GCA 90 bp GGAAGCTTATCTCAGTCAAGCTTCCTAATACACATGCAGTTAGATTCTAATGTGGGTCATACTGGGCACTaGAGCTGCCAAGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GSLSQSSFLIHMQLDSNVGHTGH*SCQGRS
Trigger: GGACCTGCCTTGGCAGCTGCAGTGCCCAGTATGACC...CACATTAGAATCTAACTGCATGTGTATTAGGAAGCTTGACTGAGATAAGCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp TACTGGATGGAGAAATCGGGGACCTGGAAGCTTATCTCAGTCAAGCTTCCTAATATGCTGCTACTCTCCTaGCTGTACCTAAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: YWMEKSGTWKLISVKLPNMLLLS*LYLRRL
Trigger: CAGCCTTCTTAGGTACAGCCAGGAGAGTAGCAGCAT...ATTAGGAAGCTTGACTGAGATAAGCTTCCAGGTCCCCGATTTCTCCATCCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp CGTGTAGAGAGGAAGGGATTTTCTCTGGCACCAACAGTGATGAAGTTTACTGATAGGCTGTCACCTGTCTaGCTCCTCTCCAGATTGAAG +
Preference number: 4 (lower is better)
Translates to: RVERKGFSLAPTVMKFTDRLSPV*LLSRLK
Trigger: CTTCAATCTGGAGAGGAGCCAGACAGGTGACAGCCT...ATCAGTAAACTTCATCACTGTTGGTGCCAGAGAAAATCCCTTCCTCTCTACACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp ATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAAAAGTGCCACCTCAGTaGACTCTTCCCAATCTGCTA +
Preference number: 4 (lower is better)
Translates to: ISSSFSLGGELAAQHSFSKVPPQ*TLPNLL
Trigger: TAGCAGATTGGGAAGAGTCCACTGAGGTGGCACTTT...TGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp AGCACTCTTTCTCAGTCTCATCAGCTCTTGGCTGAGTTAGTAGCTTGGGTAGGAGAGACGACATGTGAGTaGGTAAAGAGAGTAGCAACC +
Preference number: 4 (lower is better)
Translates to: STLSQSHQLLAELVAWVGETTCE*VKRVAT
Trigger: GGTTGCTACTCTCTTTACCCACTCACATGTCGTCTC...TCCTACCCAAGCTACTAACTCAGCCAAGAGCTGATGAGACTGAGAAAGAGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp CGTGTAGAGAGGAAGGGATTTTCTCTGGCACCAACAGTGATGAAGTTTACTGATGGTGGTGCAAGAAGCTaGGTGAAAGCAGGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: RVERKGFSLAPTVMKFTDGGARS*VKAGAS
Trigger: TGAAGCACCTGCTTTCACCCAGCTTCTTGCACCACC...ATCAGTAAACTTCATCACTGTTGGTGCCAGAGAAAATCCCTTCCTCTCTACACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp TACTGGATGGAGAAATCGGGGACCTGGAAGCTTATCTCAGTCAAGCTTCCTAATCCAGACAGGAGCTCTTaGATAAAGGACAAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: YWMEKSGTWKLISVKLPNPDRSS*IKDKWL
Trigger: CAGCCACTTGTCCTTTATCCAAGAGCTCCTGTCTGG...ATTAGGAAGCTTGACTGAGATAAGCTTCCAGGTCCCCGATTTCTCCATCCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR GCA 90 bp TCAAAGCACCTTGCTTTACCTCTGTTTAGCCCCAGTCGTGTCTGTATTAGCTCCTTCAAGGGCAGATCCTaGATTTTGGTCTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SKHLALPLFSPSRVCISSFKGRS*ILVFLL
Trigger: CAGAAGGAAGACCAAAATGCAGGATCTGCCCTTGAA...GGAGCTAATACAGACACGACTGGGGCTAAACAGAGGTAAAGCAAGGTGCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR GCA 90 bp GGAAGCTTATCTCAGTCAAGCTTCCTAATACACATGCAGTTAGATTCTAATGTGGATCCACTACATCAGTaGTCTGCCGGCCCATCGCCT +
Preference number: 4 (lower is better)
Translates to: GSLSQSSFLIHMQLDSNVDPLHQ*SAGPSP
Trigger: AGGCGATGGGCCGGCAGAGCACTGATGTAGTGGATC...CACATTAGAATCTAACTGCATGTGTATTAGGAAGCTTGACTGAGATAAGCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR GCA 90 bp CGTGTAGAGAGGAAGGGATTTTCTCTGGCACCAACAGTGATGAAGTTTACTGATATGGCCTCAGTTGGCTaGTGTCTTCAGTTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: RVERKGFSLAPTVMKFTDMASVG*CLQLAG
Trigger: ACCAGCTAACTGAAGACAGCAGCCAACTGAGGCCAT...ATCAGTAAACTTCATCACTGTTGGTGCCAGAGAAAATCCCTTCCTCTCTACACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp AAAATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCAAAGTGCCACCTCAGTaGACTCTTCCCAATCTGCTA +
Preference number: 4 (lower is better)
Translates to: KISSSFSLGGELAAQHSFKVPPQ*TLPNLL
Trigger: TAGCAGATTGGGAAGAGTCCACTGAGGTGGCACTTT...GAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CCA 90 bp GGAAGCTTATCTCAGTCAAGCTTCCTAATACACATGCAGTTAGATTCTAATGTGGCAGCCTCAGGGCCATaGAAAAGCGGTGCCACAGAA +
Preference number: 4 (lower is better)
Translates to: GSLSQSSFLIHMQLDSNVAASGP*KSGATE
Trigger: TTCTGTGGCACCGCTTTTCCATGGCCCTGAGGCTGC...CACATTAGAATCTAACTGCATGTGTATTAGGAAGCTTGACTGAGATAAGCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR TCA 90 bp ATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTTGTTCTTCATTTCTaGAGCCAGTATACCAGCCAA +
Preference number: 4 (lower is better)
Translates to: ISSSFSLGGELAAQHSFSVVLHF*SQYTSQ
Trigger: TTGGCTGGTATACTGGCTTCAGAAATGAAGAACAAC...TGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp TCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGATTTCAATCTCTCGTTaGAGATTCCTCAGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: SLLVSHLEGSWQLSTLSQISISR*RFLSSF
Trigger: GAAAGAGCTGAGGAATCTGCAACGAGAGATTGAAAT...CTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp CTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTATTTCAATCTCTCGTTaGAGATTCCTCAGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LLVSHLEGSWQLSTLSQSISISR*RFLSSF
Trigger: GAAAGAGCTGAGGAATCTGCAACGAGAGATTGAAAT...AGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp GACTGTATTATCTCAAAGCACCTTGCTTTACCTCTGTTTAGCCCCAGTCGTGTCACTGTGTTCACAAACTaGTTGAGAGAGGCAGAATCC +
Preference number: 4 (lower is better)
Translates to: DCIISKHLALPLFSPSRVTVFTN*LREAES
Trigger: GGATTCTGCCTCTCTCAAGCAGTTTGTGAACACAGT...GACACGACTGGGGCTAAACAGAGGTAAAGCAAGGTGCTTTGAGATAATACAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR GCA 90 bp AAATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTACTGTGTTCACAAACTaGTTGAGAGAGGCAGAATCC +
Preference number: 4 (lower is better)
Translates to: KSLLVSHLEGSWQLSTLSTVFTN*LREAES
Trigger: GGATTCTGCCTCTCTCAAGCAGTTTGTGAACACAGT...AGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR TCA 90 bp AAATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTAACAACAGAGAGGAATaGGATGATGGCTCTAGAAGA +
Preference number: 4 (lower is better)
Translates to: KSLLVSHLEGSWQLSTLSNNREE*DDGSRR
Trigger: TCTTCTAGAGCCATCATCTCATTCCTCTCTGTTGTT...AGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR GCA 90 bp GGAAGCTTATCTCAGTCAAGCTTCCTAATACACATGCAGTTAGATTCTAATGTGTTGGTGAGCAGCCCCTaGAAGAAGTTCTTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: GSLSQSSFLIHMQLDSNVLVSSP*KKFLKQ
Trigger: CTGCTTCAAGAACTTCTTGCAGGGGCTGCTCACCAA...CACATTAGAATCTAACTGCATGTGTATTAGGAAGCTTGACTGAGATAAGCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR GCA 90 bp GGAAGCTTATCTCAGTCAAGCTTCCTAATACACATGCAGTTAGATTCTAATGTGGGACTCTTCCCAATCTaGTACTTTCACCTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: GSLSQSSFLIHMQLDSNVGLFPI*YFHLAL
Trigger: CAGGGCAAGGTGAAAGTAGCAGATTGGGAAGAGTCC...CACATTAGAATCTAACTGCATGTGTATTAGGAAGCTTGACTGAGATAAGCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
3UTR CAA 72 bp CCCAGTCGTGTCTGTATTAGCTCCACTGGCCTTTCCTaGAAAGGTATAAACAATTCTCTAAACCAGGATCTT +
Preference number: 4 (lower is better)
Translates to: PSRVCISSTGLS*KGINNSLNQDL
Trigger: AAGATCCTGGTTTAGAGAATTGTTTATACCTTTCAAGGAAAGGCCAGTGGAGCTAATACAGACACGACTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CCA 90 bp GGAAGCTTATCTCAGTCAAGCTTCCTAATACACATGCAGTTAGATTCTAATGTGGAGACGACATGTGAGTaGGTAAAGAGAGTAGCAACC +
Preference number: 4 (lower is better)
Translates to: GSLSQSSFLIHMQLDSNVETTCE*VKRVAT
Trigger: GGTTGCTACTCTCTTTACCCACTCACATGTCGTCTC...CACATTAGAATCTAACTGCATGTGTATTAGGAAGCTTGACTGAGATAAGCTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR GCA 90 bp GGAAGCTTATCTCAGTCAAGCTTCCTAATACACATGCAGTTAGATTCTAATGTGTTTTGGTCTTCCTTCTaGTTGGCTTCTTCAGCCATG +
Preference number: 4 (lower is better)
Translates to: GSLSQSSFLIHMQLDSNVFWSSF*LASSAM
Trigger: CATGGCTGAAGAAGCCAAGCAGAAGGAAGACCAAAA...CACATTAGAATCTAACTGCATGTGTATTAGGAAGCTTGACTGAGATAAGCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS GCA 90 bp AGCTTGCACACGGAGAGCACCACAACGGGGAGAAACTCGGGCCCCTaGGGCGCCTGGCTCAGGTGGTGCAAGAAGCTGGGTGAAAGCAGG +
Preference number: 5 (lower is better)
Translates to: SLHTESTTTGRNSGP*GAWLRWCKKLGESR
Trigger: CCTGCTTTCACCCAGCTTCTTGCACCACCTGAGCCAGGCGCCGCAGGGGCCCGAGTTTCTCCCCGTTGTGGTGCTCTCCGTGTGCAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS GCA 90 bp CAGCTGCCAAGGCAGGTCCCAAAGGCCCAGCCTGGTAGGCTGCATTaGCCACAGCAAAGCTGGCACTGCGTCGCACGGCAGGGTCCTTGT +
Preference number: 5 (lower is better)
Translates to: QLPRQVPKAQPGRLH*PQQSWHCVARQGPC
Trigger: ACAAGGACCCTGCCGTGCGACGCAGTGCCAGCTTTGCTGTGGGCAATGCAGCCTACCAGGCTGGGCCTTTGGGACCTGCCTTGGCAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS CCA 90 bp ACGGAGAGCACCACAACGGGGAGAAACTCGGGCCCCTGCGGCGCCTaGCTCAGGTGGTGCAAGAAGCTGGGTGAAAGCAGGTGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: TESTTTGRNSGPCGA*LRWCKKLGESRCFR
Trigger: CCTGAAGCACCTGCTTTCACCCAGCTTCTTGCACCACCTGAGCCAGGCGCCGCAGGGGCCCGAGTTTCTCCCCGTTGTGGTGCTCTCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS GCA 90 bp ACAACGGGGAGAAACTCGGGCCCCTGCGGCGCCTGGCTCAGGTGGTaGAAGAAGCTGGGTGAAAGCAGGTGCTTCAGGGTCAGCATGAGG +
Preference number: 5 (lower is better)
Translates to: TTGRNSGPCGAWLRW*KKLGESRCFRVSMR
Trigger: CCTCATGCTGACCCTGAAGCACCTGCTTTCACCCAGCTTCTTGCACCACCTGAGCCAGGCGCCGCAGGGGCCCGAGTTTCTCCCCGTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 90 bp ACCACAACGGGGAGAAACTCGGGCCCCTGCGGCGCCTGGCTCAGGTaGTGCAAGAAGCTGGGTGAAAGCAGGTGCTTCAGGGTCAGCATG +
Preference number: 5 (lower is better)
Translates to: TTTGRNSGPCGAWLR*CKKLGESRCFRVSM
Trigger: CATGCTGACCCTGAAGCACCTGCTTTCACCCAGCTTCTTGCACCACCTGAGCCAGGCGCCGCAGGGGCCCGAGTTTCTCCCCGTTGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 90 bp GTCCCAAAGGCCCAGCCTGGTAGGCTGCATTGCCCACAGCAAAGCTaGCACTGCGTCGCACGGCAGGGTCCTTGTCTCCAAGCCCTAGCA +
Preference number: 5 (lower is better)
Translates to: VPKAQPGRLHCPQQS*HCVARQGPCLQALA
Trigger: TGCTAGGGCTTGGAGACAAGGACCCTGCCGTGCGACGCAGTGCCAGCTTTGCTGTGGGCAATGCAGCCTACCAGGCTGGGCCTTTGGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS CCA 90 bp TGCGCCGGATCCCATCCTGAGCATCTCCAAGCAGCTGGGTCATACTaGGCACTGCAGCTGCCAAGGCAGGTCCCAAAGGCCCAGCCTGGT +
Preference number: 5 (lower is better)
Translates to: CAGSHPEHLQAAGSY*ALQLPRQVPKAQPG
Trigger: ACCAGGCTGGGCCTTTGGGACCTGCCTTGGCAGCTGCAGTGCCCAGTATGACCCAGCTGCTTGGAGATGCTCAGGATGGGATCCGGCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS GCA 90 bp ATGGCTGCCAGGGCAGAAGAGATGGCTCCAGGTACATCTTCACTCTaGTCCCGCAGCGGCTGGCTCACTTGTGGGGCTCCTGGTGGTGTG +
Preference number: 5 (lower is better)
Translates to: MAARAEEMAPGTSSL*SRSGWLTCGAPGGV
Trigger: CACACCACCAGGAGCCCCACAAGTGAGCCAGCCGCTGCGGGAGCAGAGTGAAGATGTACCTGGAGCCATCTCTTCTGCCCTGGCAGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS GCA 90 bp ATACGGCGGAGTCAGCCGGACCTCTGCAGGGGCAGACAAGGCATGTaGAGCTGCAGCAATCCATTCCCGGGGCTGGAGGTCAAAGGTCAC +
Preference number: 5 (lower is better)
Translates to: IRRSQPDLCRGRQGM*SCSNPFPGLEVKGH
Trigger: GTGACCTTTGACCTCCAGCCCCGGGAATGGATTGCTGCAGCTGCACATGCCTTGTCTGCCCCTGCAGAGGTCCGGCTGACTCCGCCGTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS GCA 90 bp TGCGGCGCCTGGCTCAGGTGGTGCAAGAAGCTGGGTGAAAGCAGGTaGTTCAGGGTCAGCATGAGGACACTGCCATGCTGGGACAGGTGG +
Preference number: 5 (lower is better)
Translates to: CGAWLRWCKKLGESR*FRVSMRTLPCWDRW
Trigger: CCACCTGTCCCAGCATGGCAGTGTCCTCATGCTGACCCTGAAGCACCTGCTTTCACCCAGCTTCTTGCACCACCTGAGCCAGGCGCCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS GCA 90 bp AAGGCCCAGCCTGGTAGGCTGCATTGCCCACAGCAAAGCTGGCACTaGGTCGCACGGCAGGGTCCTTGTCTCCAAGCCCTAGCAGCAGAA +
Preference number: 5 (lower is better)
Translates to: KAQPGRLHCPQQSWH*VARQGPCLQALAAE
Trigger: TTCTGCTGCTAGGGCTTGGAGACAAGGACCCTGCCGTGCGACGCAGTGCCAGCTTTGCTGTGGGCAATGCAGCCTACCAGGCTGGGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS GCA 90 bp GATCCCATCCTGAGCATCTCCAAGCAGCTGGGTCATACTGGGCACTaGAGCTGCCAAGGCAGGTCCCAAAGGCCCAGCCTGGTAGGCTGC +
Preference number: 5 (lower is better)
Translates to: DPILSISKQLGHTGH*SCQGRSQRPSLVGC
Trigger: GCAGCCTACCAGGCTGGGCCTTTGGGACCTGCCTTGGCAGCTGCAGTGCCCAGTATGACCCAGCTGCTTGGAGATGCTCAGGATGGGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS CCA 90 bp CTGGCTCACTTGTGGGGCTCCTGGTGGTGTGTGGAAAGGAAGCTGTaGGACTGTCAGGCCGTGAAGGAGGCCATCCAACACAGCGCGCTG +
Preference number: 5 (lower is better)
Translates to: LAHLWGSWWCVERKL*DCQAVKEAIQHSAL
Trigger: CAGCGCGCTGTGTTGGATGGCCTCCTTCACGGCCTGACAGTCCCACAGCTTCCTTTCCACACACCACCAGGAGCCCCACAAGTGAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 90 bp TTCACTCTGCTCCCGCAGCGGCTGGCTCACTTGTGGGGCTCCTGGTaGTGTGTGGAAAGGAAGCTGTGGGACTGTCAGGCCGTGAAGGAG +
Preference number: 5 (lower is better)
Translates to: FTLLPQRLAHLWGSW*CVERKLWDCQAVKE
Trigger: CTCCTTCACGGCCTGACAGTCCCACAGCTTCCTTTCCACACACCACCAGGAGCCCCACAAGTGAGCCAGCCGCTGCGGGAGCAGAGTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 90 bp GCAGCCCCACAGGAGCAGTACACATGGCTGCCAGGGCAGAAGAGATaGCTCCAGGTACATCTTCACTCTGCTCCCGCAGCGGCTGGCTCA +
Preference number: 5 (lower is better)
Translates to: AAPQEQYTWLPGQKR*LQVHLHSAPAAAGS
Trigger: TGAGCCAGCCGCTGCGGGAGCAGAGTGAAGATGTACCTGGAGCCATCTCTTCTGCCCTGGCAGCCATGTGTACTGCTCCTGTGGGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS TCA 90 bp GCTCCTGGTGGTGTGTGGAAAGGAAGCTGTGGGACTGTCAGGCCGTaGAGGAGGCCATCCAACACAGCGCGCTGTGTGGTCAACAGGCTG +
Preference number: 5 (lower is better)
Translates to: APGGVWKGSCGTVRP*RRPSNTARCVVNRL
Trigger: CAGCCTGTTGACCACACAGCGCGCTGTGTTGGATGGCCTCCTTCACGGCCTGACAGTCCCACAGCTTCCTTTCCACACACCACCAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS TCA 90 bp GTCGCACGGCAGGGTCCTTGTCTCCAAGCCCTAGCAGCAGAAGGTTaGGCAGTCCTGACTGACTCTGTAGTGCCCCACGTAGGGCCATGC +
Preference number: 5 (lower is better)
Translates to: VARQGPCLQALAAEG*AVLTDSVVPHVGPC
Trigger: GCATGGCCCTACGTGGGGCACTACAGAGTCAGTCAGGACTGCTCAACCTTCTGCTGCTAGGGCTTGGAGACAAGGACCCTGCCGTGCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS GCA 90 bp GGCTTGACTCCTGAGGAGTGGCCTTTAGTCCAGGCACGGGGGCTGTaGTGGGTGTCACCTTGCAGAGCCCGTCTTCTTGTTCAAGGGCAG +
Preference number: 5 (lower is better)
Translates to: GLTPEEWPLVQARGL*WVSPCRARLLVQGQ
Trigger: CTGCCCTTGAACAAGAAGACGGGCTCTGCAAGGTGACACCCAGCACAGCCCCCGTGCCTGGACTAAAGGCCACTCCTCAGGAGTCAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS GCA 90 bp ATCCTGAGCATCTCCAAGCAGCTGGGTCATACTGGGCACTGCAGCTaGCAAGGCAGGTCCCAAAGGCCCAGCCTGGTAGGCTGCATTGCC +
Preference number: 5 (lower is better)
Translates to: ILSISKQLGHTGHCS*QGRSQRPSLVGCIA
Trigger: GGCAATGCAGCCTACCAGGCTGGGCCTTTGGGACCTGCCTTGGCAGCTGCAGTGCCCAGTATGACCCAGCTGCTTGGAGATGCTCAGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS CCA 90 bp GGACTGTCAGGCCGTGAAGGAGGCCATCCAACACAGCGCGCTGTGTaGTCAACAGGCTGGAGTAGAAGGCTTTGGAGACGGCCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: GLSGREGGHPTQRAV*STGWSRRLWRRPSC
Trigger: ACAGCTGGGCCGTCTCCAAAGCCTTCTACTCCAGCCTGTTGACCACACAGCGCGCTGTGTTGGATGGCCTCCTTCACGGCCTGACAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 90 bp ATCTTCACTCTGCTCCCGCAGCGGCTGGCTCACTTGTGGGGCTCCTaGTGGTGTGTGGAAAGGAAGCTGTGGGACTGTCAGGCCGTGAAG +
Preference number: 5 (lower is better)
Translates to: IFTLLPQRLAHLWGS*WCVERKLWDCQAVK
Trigger: CTTCACGGCCTGACAGTCCCACAGCTTCCTTTCCACACACCACCAGGAGCCCCACAAGTGAGCCAGCCGCTGCGGGAGCAGAGTGAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 90 bp GGTTGGCCAAATGCCAAGAGACCTGCTCCTTGGCATCCCAACAGCTaGGCAGCCCCACAGGAGCAGTACACATGGCTGCCAGGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: GWPNAKRPAPWHPNS*AAPQEQYTWLPGQK
Trigger: CTTCTGCCCTGGCAGCCATGTGTACTGCTCCTGTGGGGCTGCCCAGCTGTTGGGATGCCAAGGAGCAGGTCTCTTGGCATTTGGCCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 90 bp GGTCGTCTTCCTGGGCAGACACCTCCTCGGGCAGCCTCAGGGCCATaGAAAAGCGGTGCCACAGAATGGTCCACACCTCTGAACCAACCA +
Preference number: 5 (lower is better)
Translates to: GRLPGQTPPRAASGP*KSGATEWSTPLNQP
Trigger: TGGTTGGTTCAGAGGTGTGGACCATTCTGTGGCACCGCTTTTCCATGGCCCTGAGGCTGCCCGAGGAGGTGTCTGCCCAGGAAGACGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS TCA 90 bp CCATCCAGAACGCCTTTCAGGATCTGCTCGCCAGTCCCGCGCAGCTaGCTCTGGATGCGCTGGCAGAAGTCAGGGTTACACAACAGGGTG +
Preference number: 5 (lower is better)
Translates to: PSRTPFRICSPVPRS*LWMRWQKSGLHNRV
Trigger: CACCCTGTTGTGTAACCCTGACTTCTGCCAGCGCATCCAGAGTCAGCTGCGCGGGACTGGCGAGCAGATCCTGAAAGGCGTTCTGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000148456.8
CDS TCA 90 bp GGTGGCAGCAGACCTGCAGCAGGCAGACTACCACTTCCGAGGCCCTaGGGTCAGCCAAGACACCTACAAGGAGGTCAGCATCCACATCCA +
Preference number: 5 (lower is better)
Translates to: GGSRPAAGRLPLPRP*GQPRHLQGGQHPHP
Trigger: TGGATGTGGATGCTGACCTCCTTGTAGGTGTCTTGGCTGACCTCAGGGCCTCGGAAGTGGTAGTCTGCCTGCTGCAGGTCTGCTGCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS TCA 90 bp CCCAGATTGCCTAGAGCTGATGCAGCATTGCGCCGGATCCCATCCTaGGCATCTCCAAGCAGCTGGGTCATACTGGGCACTGCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: PRLPRADAALRRIPS*ASPSSWVILGTAAA
Trigger: GGCAGCTGCAGTGCCCAGTATGACCCAGCTGCTTGGAGATGCTCAGGATGGGATCCGGCGCAATGCTGCATCAGCTCTAGGCAATCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS GCA 90 bp TGGTGGTGTAGAAGGGAGGCGTGCCGACAGCCAGCTCATACAGGATaGAGCCCACAGACCAGAGGTCTGCGGTGTGGTCATATGGTCGCT +
Preference number: 5 (lower is better)
Translates to: WWCRREACRQPAHTG*SPQTRGLRCGHMVA
Trigger: AGCGACCATATGACCACACCGCAGACCTCTGGTCTGTGGGCTGCATCCTGTATGAGCTGGCTGTCGGCACGCCTCCCTTCTACACCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 90 bp CGTGAAGGAGGCCATCCAACACAGCGCGCTGTGTGGTCAACAGGCTaGAGTAGAAGGCTTTGGAGACGGCCCAGCTGTTTCCGTCCACAG +
Preference number: 5 (lower is better)
Translates to: REGGHPTQRAVWSTG*SRRLWRRPSCFRPQ
Trigger: CTGTGGACGGAAACAGCTGGGCCGTCTCCAAAGCCTTCTACTCCAGCCTGTTGACCACACAGCGCGCTGTGTTGGATGGCCTCCTTCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS-3UTR CAA 90 bp TTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCGCTGCCGGGGGTCCTaGGTGAGCAGCCCCTGCAAG +
Preference number: 5 (lower is better)
Translates to: FSLGGELAAQHSFSVSSARCRGS*VSSPCK
Trigger: CTTGCAGGGGCTGCTCACCAAGGACCCCCGGCAGCG...AGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS TCA 90 bp CCTCAGGGCCATGGAAAAGCGGTGCCACAGAATGGTCCACACCTCTaGACCAACCACATCCCTGATCAGGCCAGGCTTCCCCTGTACCTG +
Preference number: 5 (lower is better)
Translates to: PQGHGKAVPQNGPHL*TNHIPDQARLPLYL
Trigger: CAGGTACAGGGGAAGCCTGGCCTGATCAGGGATGTGGTTGGTTCAGAGGTGTGGACCATTCTGTGGCACCGCTTTTCCATGGCCCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS TCA 90 bp GGTGGTGCAAGAAGCTGGGTGAAAGCAGGTGCTTCAGGGTCAGCATaGGGACACTGCCATGCTGGGACAGGTGGCTCAGGCATAACTGGG +
Preference number: 5 (lower is better)
Translates to: GGARSWVKAGASGSA*GHCHAGTGGSGITG
Trigger: CCCAGTTATGCCTGAGCCACCTGTCCCAGCATGGCAGTGTCCTCATGCTGACCCTGAAGCACCTGCTTTCACCCAGCTTCTTGCACCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS TCA 90 bp GCTTCACACAAGACAGCAAAGCACTGCTCGCCAGTCCCGCGCAGCTaGCTCTGGATGCGCTGGCAGAAGTCAGGGTTACACAACAGGGTG +
Preference number: 5 (lower is better)
Translates to: ASHKTAKHCSPVPRS*LWMRWQKSGLHNRV
Trigger: CACCCTGTTGTGTAACCCTGACTTCTGCCAGCGCATCCAGAGTCAGCTGCGCGGGACTGGCGAGCAGTGCTTTGCTGTCTTGTGTGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087186.11
CDS GCA 90 bp CTGGGTGAAAGCAGGTGCTTCAGGGTCAGCATGAGGACACTGCCATaGTGGGACAGGTGGCTCAGGCATAACTGGGACTCCTGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: LGESRCFRVSMRTLP*WDRWLRHNWDSWVK
Trigger: CTTCACCCAGGAGTCCCAGTTATGCCTGAGCCACCTGTCCCAGCATGGCAGTGTCCTCATGCTGACCCTGAAGCACCTGCTTTCACCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS GCA 90 bp ATGGGCAGCTCTGCTTGTAACAACGAAAGGTGGTGGCAGCAGACCTaGAGCAGGCAGACTACCACTTCCGAGGCCCTGAGGTCAGCCAAG +
Preference number: 5 (lower is better)
Translates to: MGSSACNNERWWQQT*SRQTTTSEALRSAK
Trigger: CTTGGCTGACCTCAGGGCCTCGGAAGTGGTAGTCTGCCTGCTGCAGGTCTGCTGCCACCACCTTTCGTTGTTACAAGCAGAGCTGCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 90 bp TTGACTCCTGAGGAGTGGCCTTTAGTCCAGGCACGGGGGCTGTGCTaGGTGTCACCTTGCAGAGCCCGTCTTCTTGTTCAAGGGCAGATC +
Preference number: 5 (lower is better)
Translates to: LTPEEWPLVQARGLC*VSPCRARLLVQGQI
Trigger: GATCTGCCCTTGAACAAGAAGACGGGCTCTGCAAGGTGACACCCAGCACAGCCCCCGTGCCTGGACTAAAGGCCACTCCTCAGGAGTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 90 bp CACTACATCAGTGCTCTGCCGGCCCATCGCCTCTGGCCTCGGCTCTaGGAAGCCTTGTTCACACTCCAGGTTGATGTGGTTTTCCCGAGA +
Preference number: 5 (lower is better)
Translates to: HYISALPAHRLWPRL*EALFTLQVDVVFPR
Trigger: TCTCGGGAAAACCACATCAACCTGGAGTGTGAACAAGGCTTCCCAGAGCCGAGGCCAGAGGCGATGGGCCGGCAGAGCACTGATGTAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 90 bp ACAGCCACCAGGTCCCGTAAGAGCGCCCCATACCAAGGTTGCTGCTaGATGCTGCTACTCTCCTGGCTGTACCTAAGAAGGCTGAGAGGC +
Preference number: 5 (lower is better)
Translates to: TATRSRKSAPYQGCC*MLLLSWLYLRRLRG
Trigger: GCCTCTCAGCCTTCTTAGGTACAGCCAGGAGAGTAGCAGCATCCAGCAGCAACCTTGGTATGGGGCGCTCTTACGGGACCTGGTGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000148456.8
CDS CCA 90 bp CATCTGATTGGGCCAGCAGCTTCCCCAACAGGTCCAAAAAGAGGCTaGCGGCCTCCTGAAACACCTGTAGGCTGTCACCTGTCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: HLIGPAASPTGPKRG*RPPETPVGCHLSGS
Trigger: GGAGCCAGACAGGTGACAGCCTACAGGTGTTTCAGGAGGCCGCCAGCCTCTTTTTGGACCTGTTGGGGAAGCTGCTGGCCCAATCAGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000148456.8
CDS CCA 90 bp GAAGAGATGGCTCCAGGTACATCTTCACTCTGCTCCCGCAGCGGCTaGCTCACTTGTGGGGCTCCTGGTGGTGTGTGGAAAGGAAGCTGT +
Preference number: 5 (lower is better)
Translates to: EEMAPGTSSLCSRSG*LTCGAPGGVWKGSC
Trigger: ACAGCTTCCTTTCCACACACCACCAGGAGCCCCACAAGTGAGCCAGCCGCTGCGGGAGCAGAGTGAAGATGTACCTGGAGCCATCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 90 bp CCTTGGCATCCCAACAGCTGGGCAGCCCCACAGGAGCAGTACACATaGCTGCCAGGGCAGAAGAGATGGCTCCAGGTACATCTTCACTCT +
Preference number: 5 (lower is better)
Translates to: PWHPNSWAAPQEQYT*LPGQKRWLQVHLHS
Trigger: AGAGTGAAGATGTACCTGGAGCCATCTCTTCTGCCCTGGCAGCCATGTGTACTGCTCCTGTGGGGCTGCCCAGCTGTTGGGATGCCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 90 bp GTAAGGAGGCCAATGGGCAGCTCTGCTTGTAACAACGAAAGGTGGTaGCAGCAGACCTGCAGCAGGCAGACTACCACTTCCGAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: VRRPMGSSACNNERW*QQTCSRQTTTSEAL
Trigger: CAGGGCCTCGGAAGTGGTAGTCTGCCTGCTGCAGGTCTGCTGCCACCACCTTTCGTTGTTACAAGCAGAGCTGCCCATTGGCCTCCTTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 90 bp CGTGTAAGGAGGCCAATGGGCAGCTCTGCTTGTAACAACGAAAGGTaGTGGCAGCAGACCTGCAGCAGGCAGACTACCACTTCCGAGGCC +
Preference number: 5 (lower is better)
Translates to: RVRRPMGSSACNNER*WQQTCSRQTTTSEA
Trigger: GGCCTCGGAAGTGGTAGTCTGCCTGCTGCAGGTCTGCTGCCACCACCTTTCGTTGTTACAAGCAGAGCTGCCCATTGGCCTCCTTACACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS TCA 90 bp CCTCAGGGCCATGGAAAAGCGGTGCCACAGAATGGTCCACACCTCTaGACCAACCACATCCCTGATCAGGCCAGGCTTCCCCTGCATAAG +
Preference number: 5 (lower is better)
Translates to: PQGHGKAVPQNGPHL*TNHIPDQARLPLHK
Trigger: CTTATGCAGGGGAAGCCTGGCCTGATCAGGGATGTGGTTGGTTCAGAGGTGTGGACCATTCTGTGGCACCGCTTTTCCATGGCCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148456.8
CDS GCA 90 bp TCACTGTCTGGCTCCTCATTTTCAGGATCCACTACATCAGTGCTCTaGCGGCCCATCGCCTCTGGCCTCGGCTCTGGGAAGCCTTGTTCA +
Preference number: 5 (lower is better)
Translates to: SLSGSSFSGSTTSVL*RPIASGLGSGKPCS
Trigger: TGAACAAGGCTTCCCAGAGCCGAGGCCAGAGGCGATGGGCCGGCAGAGCACTGATGTAGTGGATCCTGAAAATGAGGAGCCAGACAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS GCA 90 bp CATCATCACTGTCTGGCTCCTCATTTTCAGGATCCACTACATCAGTaGTCTGCCGGCCCATCGCCTCTGGCCTCGGCTCTGGGAAGCCTT +
Preference number: 5 (lower is better)
Translates to: HHHCLAPHFQDPLHQ*SAGPSPLASALGSL
Trigger: AAGGCTTCCCAGAGCCGAGGCCAGAGGCGATGGGCCGGCAGAGCACTGATGTAGTGGATCCTGAAAATGAGGAGCCAGACAGTGATGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS GCA 90 bp ACCACAGCCACCAGGTCCCGTAAGAGCGCCCCATACCAAGGTTGCTaGTGGATGCTGCTACTCTCCTGGCTGTACCTAAGAAGGCTGAGA +
Preference number: 5 (lower is better)
Translates to: TTATRSRKSAPYQGC*WMLLLSWLYLRRLR
Trigger: TCTCAGCCTTCTTAGGTACAGCCAGGAGAGTAGCAGCATCCAGCAGCAACCTTGGTATGGGGCGCTCTTACGGGACCTGGTGGCTGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000148456.8
CDS CCA 90 bp TGGTCTTCCTTCTGCTTGGCTTCTTCAGCCATGAGTTTACAGGCCTaGCGCAGGATGCGAGACTGGTTACCCTTGGGTGCGAGCCGATGC +
Preference number: 5 (lower is better)
Translates to: WSSFCLASSAMSLQA*RRMRDWLPLGASRC
Trigger: GCATCGGCTCGCACCCAAGGGTAACCAGTCTCGCATCCTGCGCCAGGCCTGTAAACTCATGGCTGAAGAAGCCAAGCAGAAGGAAGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 90 bp TTTCTGAAGCCAGTATACCAGCCAAGAGGCTTGACTCCTGAGGAGTaGCCTTTAGTCCAGGCACGGGGGCTGTGCTGGGTGTCACCTTGC +
Preference number: 5 (lower is better)
Translates to: FLKPVYQPRGLTPEE*PLVQARGLCWVSPC
Trigger: GCAAGGTGACACCCAGCACAGCCCCCGTGCCTGGACTAAAGGCCACTCCTCAGGAGTCAAGCCTCTTGGCTGGTATACTGGCTTCAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 90 bp GGTGAAAGCAGGTGCTTCAGGGTCAGCATGAGGACACTGCCATGCTaGGACAGGTGGCTCAGGCATAACTGGGACTCCTGGGTGAAGATG +
Preference number: 5 (lower is better)
Translates to: GESRCFRVSMRTLPC*DRWLRHNWDSWVKM
Trigger: CATCTTCACCCAGGAGTCCCAGTTATGCCTGAGCCACCTGTCCCAGCATGGCAGTGTCCTCATGCTGACCCTGAAGCACCTGCTTTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS-3UTR CAA 90 bp GCTGAGCGGTACCAAGAGGAGCCTCTCCTTTTACTGGATGGAGAAATCGGGGACGTCAGCACCATGGTGTaGGTGCTCATAGCTCGGGCG +
Preference number: 5 (lower is better)
Translates to: AERYQEEPLLLLDGEIGDVSTMV*VLIARA
Trigger: CGCCCGAGCTATGAGCACCAACACCATGGTGCTGAC...GTCCCCGATTTCTCCATCCAGTAAAAGGAGAGGCTCCTCTTGGTACCGCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CAA 90 bp AGCACTCTTTCTCAGTCTCATCAGCTCTTGGCTGAGTTAGTAGCTTGGGTAGGACGCTGCCGGGGGTCCTaGGTGAGCAGCCCCTGCAAG +
Preference number: 5 (lower is better)
Translates to: STLSQSHQLLAELVAWVGRCRGS*VSSPCK
Trigger: CTTGCAGGGGCTGCTCACCAAGGACCCCCGGCAGCG...TCCTACCCAAGCTACTAACTCAGCCAAGAGCTGATGAGACTGAGAAAGAGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CAA 90 bp TCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTCAGCGGCTGGCTCACTaGTGGGGCTCCTGGTGGTGT +
Preference number: 5 (lower is better)
Translates to: SLGGELAAQHSFSVSSALQRLAH*WGSWWC
Trigger: ACACCACCAGGAGCCCCACAAGTGAGCCAGCCGCTG...AAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS TCA 90 bp CCTGAAACACCTGTAGGCTGTCACCTGTCTGGCTCCTCTCCAGATTaGAGGTGCACGAAAAGTAGGCCTGAACCACAGCCACCAGGTCCC +
Preference number: 5 (lower is better)
Translates to: PETPVGCHLSGSSPD*RCTKSRPEPQPPGP
Trigger: GGGACCTGGTGGCTGTGGTTCAGGCCTACTTTTCGTGCACCTTCAATCTGGAGAGGAGCCAGACAGGTGACAGCCTACAGGTGTTTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000148456.8
CDS GCA 90 bp CATATGCACGGACCCGCACAGTGTTCTCTGAGTGGCCTAGGAGGCTaGGCAATGGCCGATAGGATTCATCAGAGCCAGACAGGAGCTCTT +
Preference number: 5 (lower is better)
Translates to: HMHGPAQCSLSGLGG*AMADRIHQSQTGAL
Trigger: AAGAGCTCCTGTCTGGCTCTGATGAATCCTATCGGCCATTGCGCAGCCTCCTAGGCCACTCAGAGAACACTGTGCGGGTCCGTGCATATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS GCA 90 bp TGCCCAATCCTTCAGGTCCCAGATTGCCTAGAGCTGATGCAGCATTaGGCCGGATCCCATCCTGAGCATCTCCAAGCAGCTGGGTCATAC +
Preference number: 5 (lower is better)
Translates to: CPILQVPDCLELMQH*AGSHPEHLQAAGSY
Trigger: GTATGACCCAGCTGCTTGGAGATGCTCAGGATGGGATCCGGCGCAATGCTGCATCAGCTCTAGGCAATCTGGGACCTGAAGGATTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS CCA 90 bp CCAGAGGTCTGCGGTGTGGTCATATGGTCGCTCCTCCACCAGCTCTaGAGACATATAGAGCGGTGTGCCTTTGATCGACGTCAGCACCAT +
Preference number: 5 (lower is better)
Translates to: PEVCGVVIWSLLHQL*RHIERCAFDRRQHH
Trigger: ATGGTGCTGACGTCGATCAAAGGCACACCGCTCTATATGTCTCCAGAGCTGGTGGAGGAGCGACCATATGACCACACCGCAGACCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 90 bp ATTTTCAGGATCCACTACATCAGTGCTCTGCCGGCCCATCGCCTCTaGCCTCGGCTCTGGGAAGCCTTGTTCACACTCCAGGTTGATGTG +
Preference number: 5 (lower is better)
Translates to: IFRIHYISALPAHRL*PRLWEALFTLQVDV
Trigger: CACATCAACCTGGAGTGTGAACAAGGCTTCCCAGAGCCGAGGCCAGAGGCGATGGGCCGGCAGAGCACTGATGTAGTGGATCCTGAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 90 bp CAGCTGGATAGGAGACTACTCAGGATGCGGAGTACAGGAAGGAGGTaGGACACACCATCCAGAACGCCTTTCAGGATCTGCTCGCCAGTC +
Preference number: 5 (lower is better)
Translates to: QLDRRLLRMRSTGRR*DTPSRTPFRICSPV
Trigger: GACTGGCGAGCAGATCCTGAAAGGCGTTCTGGATGGTGTGTCCCACCTCCTTCCTGTACTCCGCATCCTGAGTAGTCTCCTATCCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000148456.8
CDS-3UTR CAA 90 bp GCTGAGCGGTACCAAGAGGAGCCTCTCCTTTTACTGGATGGAGAAATCGGGGACTCTGAGCGCCCCAGTTaGGGGATGAACTTCAAGGCC +
Preference number: 5 (lower is better)
Translates to: AERYQEEPLLLLDGEIGDSERPS*GMNFKA
Trigger: GGCCTTGAAGTTCATCCCCAAACTGGGGCGCTCAGA...GTCCCCGATTTCTCCATCCAGTAAAAGGAGAGGCTCCTCTTGGTACCGCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CAA 90 bp TTCTTGAAGCAGGAACTAATGGTGGAGGGCCAGCGCACAGGGTCCTTGAGAATGGTCAGCACCATGGTGTaGGTGCTCATAGCTCGGGCG +
Preference number: 5 (lower is better)
Translates to: FLKQELMVEGQRTGSLRMVSTMV*VLIARA
Trigger: CGCCCGAGCTATGAGCACCAACACCATGGTGCTGAC...CATTCTCAAGGACCCTGTGCGCTGGCCCTCCACCATTAGTTCCTGCTTCAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189830.2
CDS-3UTR CAA 90 bp CTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTCAAGGCCAGGGGCTCTaGCCCCAGAATATGGCACAG +
Preference number: 5 (lower is better)
Translates to: LTWRGVGSSALFLSLISSQGQGL*PQNMAQ
Trigger: CTGTGCCATATTCTGGGGCAAGAGCCCCTGGCCTTG...AGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CAA 90 bp GGAGGAAAGATCCCTACGTGTAGAGAGGAAGGGATTTTCTCTGGCACCAACAGTCGCACGGCAGGGTCCTaGTCTCCAAGCCCTAGCAGC +
Preference number: 5 (lower is better)
Translates to: GGKIPTCREEGIFSGTNSRTAGS*SPSPSS
Trigger: GCTGCTAGGGCTTGGAGACAAGGACCCTGCCGTGCG...ACTGTTGGTGCCAGAGAAAATCCCTTCCTCTCTACACGTAGGGATCTTTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS TCA 90 bp CAGTGTCTGACGGAGGCAGGCCTGTTGCTGCTATTCGGCAGTAACTaGTTCCCCAAAGAGAGCAAGGCTAACTTCTCACTGGCACCCAGC +
Preference number: 5 (lower is better)
Translates to: QCLTEAGLLLLFGSN*FPKESKANFSLAPS
Trigger: GCTGGGTGCCAGTGAGAAGTTAGCCTTGCTCTCTTTGGGGAATCAGTTACTGCCGAATAGCAGCAACAGGCCTGCCTCCGTCAGACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS GCA 90 bp GACTTCAGCTGCACAGGCCCAGGCTCGCTGGTCTCTAGTAGGCGTTaGCACTCATCATCACTGTCTGGCTCCTCATTTTCAGGATCCACT +
Preference number: 5 (lower is better)
Translates to: DFSCTGPGSLVSSRR*HSSSLSGSSFSGST
Trigger: AGTGGATCCTGAAAATGAGGAGCCAGACAGTGATGATGAGTGGCAACGCCTACTAGAGACCAGCGAGCCTGGGCCTGTGCAGCTGAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS GCA 90 bp CTCCTGGCTGTACCTAAGAAGGCTGAGAGGCAGCTCAGGCAGTCCTaGCTCCTGGCAGAAGGAATACAAGAGCACAGAGTCATTGCAGCT +
Preference number: 5 (lower is better)
Translates to: LLAVPKKAERQLRQS*LLAEGIQEHRVIAA
Trigger: AGCTGCAATGACTCTGTGCTCTTGTATTCCTTCTGCCAGGAGGCAGGACTGCCTGAGCTGCCTCTCAGCCTTCTTAGGTACAGCCAGGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000148456.8
CDS CCA 90 bp CCAGAGATGAGGGATGGCCTCAGTTGGCTGCTGTCTTCAGTTAGCTaGTTGGCCAAATGCCAAGAGACCTGCTCCTTGGCATCCCAACAG +
Preference number: 5 (lower is better)
Translates to: PEMRDGLSWLLSSVS*LAKCQETCSLASQQ
Trigger: CTGTTGGGATGCCAAGGAGCAGGTCTCTTGGCATTTGGCCAACCAGCTAACTGAAGACAGCAGCCAACTGAGGCCATCCCTCATCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 90 bp CACAGGACATGGTGTCGCAGACCAGAGATGAGGGATGGCCTCAGTTaGCTGCTGTCTTCAGTTAGCTGGTTGGCCAAATGCCAAGAGACC +
Preference number: 5 (lower is better)
Translates to: HRTWCRRPEMRDGLS*LLSSVSWLAKCQET
Trigger: GGTCTCTTGGCATTTGGCCAACCAGCTAACTGAAGACAGCAGCCAACTGAGGCCATCCCTCATCTCTGGTCTGCGACACCATGTCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS-3UTR CAA 90 bp CACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTGTCTGAGCGCCCCAGTTaGGGGATGAACTTCAAGGCC +
Preference number: 5 (lower is better)
Translates to: HLEGSWQLSTLSQSHQLLSERPS*GMNFKA
Trigger: GGCCTTGAAGTTCATCCCCAAACTGGGGCGCTCAGA...CAAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CAA 90 bp AGCACTCTTTCTCAGTCTCATCAGCTCTTGGCTGAGTTAGTAGCTTGGGTAGGACGCACGGCAGGGTCCTaGTCTCCAAGCCCTAGCAGC +
Preference number: 5 (lower is better)
Translates to: STLSQSHQLLAELVAWVGRTAGS*SPSPSS
Trigger: GCTGCTAGGGCTTGGAGACAAGGACCCTGCCGTGCG...TCCTACCCAAGCTACTAACTCAGCCAAGAGCTGATGAGACTGAGAAAGAGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS CCA 90 bp CTGCCTCCTGGCAGAAGGAATACAAGAGCACAGAGTCATTGCAGCTaGATAGGAGACTACTCAGGATGCGGAGTACAGGAAGGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: LPPGRRNTRAQSHCS*IGDYSGCGVQEGGG
Trigger: CCCACCTCCTTCCTGTACTCCGCATCCTGAGTAGTCTCCTATCCAGCTGCAATGACTCTGTGCTCTTGTATTCCTTCTGCCAGGAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000148456.8
CDS CCA 90 bp CACATAAGGCTATCCCTTCGAAATGTCTGCTCGGAATCATCTGATTaGGCCAGCAGCTTCCCCAACAGGTCCAAAAAGAGGCTGGCGGCC +
Preference number: 5 (lower is better)
Translates to: HIRLSLRNVCSESSD*ASSFPNRSKKRLAA
Trigger: GGCCGCCAGCCTCTTTTTGGACCTGTTGGGGAAGCTGCTGGCCCAATCAGATGATTCCGAGCAGACATTTCGAAGGGATAGCCTTATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000148456.8
CDS-3UTR CAA 90 bp TCTTCAGCCATGAGTTTACAGGCCTGGCGCAGGATGCGAGACTGGTTACCCTTGACCACCACCACCTCTTaGTCAGTCTCAAAGCTGTCG +
Preference number: 5 (lower is better)
Translates to: SSAMSLQAWRRMRDWLPLTTTTS*SVSKLS
Trigger: CGACAGCTTTGAGACTGACAAAGAGGTGGTGGTGGT...CAAGGGTAACCAGTCTCGCATCCTGCGCCAGGCCTGTAAACTCATGGCTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189830.2
CDS-3UTR CAA 90 bp GGTGTCAGAGAAGCTAGAAAAGGGCCCAAGCTTCCCACCCCTTACCTTGGGAGCTTAATGCCACCACCCTaGGCGAGAAGAATGTTCTGC +
Preference number: 5 (lower is better)
Translates to: GVREARKGPKLPTPYLGSLMPPP*ARRMFC
Trigger: GCAGAACATTCTTCTCGCCAAGGGTGGTGGCATTAA...GCTCCCAAGGTAAGGGGTGGGAAGCTTGGGCCCTTTTCTAGCTTCTCTGACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CAA 90 bp AAATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGCGGCTGGCTCACTaGTGGGGCTCCTGGTGGTGT +
Preference number: 5 (lower is better)
Translates to: KSLLVSHLEGSWQLSTLSQRLAH*WGSWWC
Trigger: ACACCACCAGGAGCCCCACAAGTGAGCCAGCCGCTG...AGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CAA 90 bp TCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGGGGAAGCAGAGCAGCTaGCACACGGAGAGCACCACA +
Preference number: 5 (lower is better)
Translates to: SLLVSHLEGSWQLSTLSQGKQSS*HTESTT
Trigger: TGTGGTGCTCTCCGTGTGCAAGCTGCTCTGCTTCCC...CTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CAA 90 bp TTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTACGGAGGCAGGCCTGTaGCTGCTATTCGGCAGTAAC +
Preference number: 5 (lower is better)
Translates to: FSLGGELAAQHSFSVSSATEAGL*LLFGSN
Trigger: GTTACTGCCGAATAGCAGCAACAGGCCTGCCTCCGT...AGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CAA 90 bp TCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTACGGAGGCAGGCCTGTaGCTGCTATTCGGCAGTAAC +
Preference number: 5 (lower is better)
Translates to: SLGGELAAQHSFSVSSALTEAGL*LLFGSN
Trigger: GTTACTGCCGAATAGCAGCAACAGGCCTGCCTCCGT...AAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS TCA 90 bp CCGCATGATTTCAATCTCTCGTTGCAGATTCCTCAGCTCTTTCTCTaGGCGCCCCAGTTTGGGGATGAACTTCAAGGCCACCACCTGAGC +
Preference number: 5 (lower is better)
Translates to: PHDFNLSLQIPQLFL*APQFGDELQGHHLS
Trigger: GCTCAGGTGGTGGCCTTGAAGTTCATCCCCAAACTGGGGCGCTCAGAGAAAGAGCTGAGGAATCTGCAACGAGAGATTGAAATCATGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000113694.8
ENSMUST00000148456.8
CDS TCA 90 bp CAGATCCTGCATTTTGGTCTTCCTTCTGCTTGGCTTCTTCAGCCATaGGTTTACAGGCCTGGCGCAGGATGCGAGACTGGTTACCCTTGG +
Preference number: 5 (lower is better)
Translates to: QILHFGLPSAWLLQP*VYRPGAGCETGYPW
Trigger: CCAAGGGTAACCAGTCTCGCATCCTGCGCCAGGCCTGTAAACTCATGGCTGAAGAAGCCAAGCAGAAGGAAGACCAAAATGCAGGATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS TCA 90 bp TCCTTGTCTCCAAGCCCTAGCAGCAGAAGGTTGAGCAGTCCTGACTaGCTCTGTAGTGCCCCACGTAGGGCCATGCTGTGCTGTAATAAA +
Preference number: 5 (lower is better)
Translates to: SLSPSPSSRRLSSPD*LCSAPRRAMLCCNK
Trigger: TTTATTACAGCACAGCATGGCCCTACGTGGGGCACTACAGAGTCAGTCAGGACTGCTCAACCTTCTGCTGCTAGGGCTTGGAGACAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS GCA 90 bp GCAGTCCTGCCTCCTGGCAGAAGGAATACAAGAGCACAGAGTCATTaGAGCTGGATAGGAGACTACTCAGGATGCGGAGTACAGGAAGGA +
Preference number: 5 (lower is better)
Translates to: AVLPPGRRNTRAQSH*SWIGDYSGCGVQEG
Trigger: TCCTTCCTGTACTCCGCATCCTGAGTAGTCTCCTATCCAGCTGCAATGACTCTGTGCTCTTGTATTCCTTCTGCCAGGAGGCAGGACTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000148456.8
CDS GCA 90 bp CTTGGCACTTTAATAGCTCCTTGCCCAATCCTTCAGGTCCCAGATTaGCTAGAGCTGATGCAGCATTGCGCCGGATCCCATCCTGAGCAT +
Preference number: 5 (lower is better)
Translates to: LGTLIAPCPILQVPD*LELMQHCAGSHPEH
Trigger: ATGCTCAGGATGGGATCCGGCGCAATGCTGCATCAGCTCTAGGCAATCTGGGACCTGAAGGATTGGGCAAGGAGCTATTAAAGTGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS CCA 90 bp CCTAAGAGACAGGCTGCCGCATTCACAAGAGAGACGACATGTGAGTaGGTAAAGAGAGTAGCAACCTCACTGCCCAGCTTCTCCATCCCT +
Preference number: 5 (lower is better)
Translates to: PKRQAAAFTRETTCE*VKRVATSLPSFSIP
Trigger: AGGGATGGAGAAGCTGGGCAGTGAGGTTGCTACTCTCTTTACCCACTCACATGTCGTCTCTCTTGTGAATGCGGCAGCCTGTCTCTTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS-3UTR CAA 90 bp ATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCAGCACCATGGTGTaGGTGCTCATAGCTCGGGCG +
Preference number: 5 (lower is better)
Translates to: ISSSFSLGGELAAQHSFSVSTMV*VLIARA
Trigger: CGCCCGAGCTATGAGCACCAACACCATGGTGCTGAC...TGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CAA 90 bp AGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCACAGCGCACAGGGTCCTaGAGAATGAGGCTAACCAGC +
Preference number: 5 (lower is better)
Translates to: SFSLGGELAAQHSFSVSSQRTGS*RMRLTS
Trigger: GCTGGTTAGCCTCATTCTCAAGGACCCTGTGCGCTG...TGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CAA 90 bp CACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTGGGCAGATCCTGCATTTaGGTCTTCCTTCTGCTTGGC +
Preference number: 5 (lower is better)
Translates to: HLEGSWQLSTLSQSHQLLGRSCI*VFLLLG
Trigger: GCCAAGCAGAAGGAAGACCAAAATGCAGGATCTGCC...CAAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CAA 90 bp CTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTGGCAGATCCTGCATTTaGGTCTTCCTTCTGCTTGGC +
Preference number: 5 (lower is better)
Translates to: LTWRGVGSSALFLSLISSGRSCI*VFLLLG
Trigger: GCCAAGCAGAAGGAAGACCAAAATGCAGGATCTGCC...AGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CAA 90 bp CAATTCTCTAAACCAGGATCTTGTGTGAACAGGGTACAGGGCTTCCGGTGTCAGCGCCCCATACCAAGGTaGCTGCTGGATGCTGCTACT +
Preference number: 5 (lower is better)
Translates to: QFSKPGSCVNRVQGFRCQRPIPR*LLDAAT
Trigger: AGTAGCAGCATCCAGCAGCAACCTTGGTATGGGGCG...CTGACACCGGAAGCCCTGTACCCTGTTCACACAAGATCCTGGTTTAGAGAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS GCA 90 bp CCGTCTTCTTGTTCAAGGGCAGATCCTGCATTTTGGTCTTCCTTCTaGTTGGCTTCTTCAGCCATGAGTTTACAGGCCTGGCGCAGGATG +
Preference number: 5 (lower is better)
Translates to: PSSCSRADPAFWSSF*LASSAMSLQAWRRM
Trigger: CATCCTGCGCCAGGCCTGTAAACTCATGGCTGAAGAAGCCAAGCAGAAGGAAGACCAAAATGCAGGATCTGCCCTTGAACAAGAAGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS GCA 90 bp AGGCAGATCTTGGAGCCGAAAGACAAGAAGGGACAGGAGGTAAAGTaGCACCTCAGTGGACTCTTCCCAATCTGCTACTTTCACCTTGCC +
Preference number: 5 (lower is better)
Translates to: RQILEPKDKKGQEVK*HLSGLFPICYFHLA
Trigger: GGCAAGGTGAAAGTAGCAGATTGGGAAGAGTCCACTGAGGTGGCACTTTACCTCCTGTCCCTTCTTGTCTTTCGGCTCCAAGATCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS GCA 90 bp CCATTTCTAGGAGCCGCTGGGGTACTTGGCACTTTAATAGCTCCTTaGCCAATCCTTCAGGTCCCAGATTGCCTAGAGCTGATGCAGCAT +
Preference number: 5 (lower is better)
Translates to: PFLGAAGVLGTLIAP*PILQVPDCLELMQH
Trigger: ATGCTGCATCAGCTCTAGGCAATCTGGGACCTGAAGGATTGGGCAAGGAGCTATTAAAGTGCCAAGTACCCCAGCGGCTCCTAGAAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS CCA 90 bp TCGGCAGTAACTGATTCCCCAAAGAGAGCAAGGCTAACTTCTCACTaGCACCCAGCGACACCAGCACCTGATGAATACAGGACTCCTGTT +
Preference number: 5 (lower is better)
Translates to: SAVTDSPKRARLTSH*HPATPAPDEYRTPV
Trigger: AACAGGAGTCCTGTATTCATCAGGTGCTGGTGTCGCTGGGTGCCAGTGAGAAGTTAGCCTTGCTCTCTTTGGGGAATCAGTTACTGCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CAA 90 bp GGAGGAAAGATCCCTACGTGTAGAGAGGAAGGGATTTTCTCTGGCACCAACAGTAGCATATGCACAATGTaGGGATGCCACAGACCCCGC +
Preference number: 5 (lower is better)
Translates to: GGKIPTCREEGIFSGTNSSICTM*GCHRPR
Trigger: GCGGGGTCTGTGGCATCCCAACATTGTGCATATGCT...ACTGTTGGTGCCAGAGAAAATCCCTTCCTCTCTACACGTAGGGATCTTTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CAA 90 bp TTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCACCACCACCACCTCTTaGTCAGTCTCAAAGCTGTCG +
Preference number: 5 (lower is better)
Translates to: FLTWRGVGSSALFLSLISTTTTS*SVSKLS
Trigger: CGACAGCTTTGAGACTGACAAAGAGGTGGTGGTGGT...GCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CAA 90 bp TTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTACCACCACCACCTCTTaGTCAGTCTCAAAGCTGTCG +
Preference number: 5 (lower is better)
Translates to: FSLGGELAAQHSFSVSSATTTTS*SVSKLS
Trigger: CGACAGCTTTGAGACTGACAAAGAGGTGGTGGTGGT...AGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CAA 90 bp GCTGAGCGGTACCAAGAGGAGCCTCTCCTTTTACTGGATGGAGAAATCGGGGACCCCTGCAAGAAGTTCTaGAAGCAGGAACTAATGGTG +
Preference number: 5 (lower is better)
Translates to: AERYQEEPLLLLDGEIGDPCKKF*KQELMV
Trigger: CACCATTAGTTCCTGCTTCAAGAACTTCTTGCAGGG...GTCCCCGATTTCTCCATCCAGTAAAAGGAGAGGCTCCTCTTGGTACCGCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CAA 90 bp CACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTGTGGTCTTCCTTCTGCTaGGCTTCTTCAGCCATGAGT +
Preference number: 5 (lower is better)
Translates to: HLEGSWQLSTLSQSHQLLWSSFC*ASSAMS
Trigger: ACTCATGGCTGAAGAAGCCAAGCAGAAGGAAGACCA...CAAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CAA 90 bp AAAATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCCAAGGCCAGGGGCTCTaGCCCCAGAATATGGCACAG +
Preference number: 5 (lower is better)
Translates to: KISSSFSLGGELAAQHSFQGQGL*PQNMAQ
Trigger: CTGTGCCATATTCTGGGGCAAGAGCCCCTGGCCTTG...GAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CAA 90 bp CACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCTTGCACTTTAATAGCTCCTaGCCCAATCCTTCAGGTCCC +
Preference number: 5 (lower is better)
Translates to: HLEGSWQLSTLSQSHQLLHFNSS*PNPSGP
Trigger: GGGACCTGAAGGATTGGGCAAGGAGCTATTAAAGTG...CAAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CAA 90 bp CAGGTAGGCTACGAGCTGAGGAACCCCTCAACAATAGGGGTAATGACATTTATCGGTTGGCCTCAGGAGTaGGATGAGCTTCCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: QVGYELRNPSTIGVMTFIGWPQE*DELPAV
Trigger: CACTGCAGGAAGCTCATCCAACTCCTGAGGCCAACC...GATAAATGTCATTACCCCTATTGTTGAGGGGTTCCTCAGCTCGTAGCCTACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS TCA 90 bp AAAGCACATAAGGCTATCCCTTCGAAATGTCTGCTCGGAATCATCTaGTTGGGCCAGCAGCTTCCCCAACAGGTCCAAAAAGAGGCTGGC +
Preference number: 5 (lower is better)
Translates to: KAHKAIPSKCLLGII*LGQQLPQQVQKEAG
Trigger: GCCAGCCTCTTTTTGGACCTGTTGGGGAAGCTGCTGGCCCAATCAGATGATTCCGAGCAGACATTTCGAAGGGATAGCCTTATGTGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000148456.8
CDS GCA 90 bp TCACACAAGACAGCAAAGCACATAAGGCTATCCCTTCGAAATGTCTaGTCGGAATCATCTGATTGGGCCAGCAGCTTCCCCAACAGGTCC +
Preference number: 5 (lower is better)
Translates to: SHKTAKHIRLSLRNV*SESSDWASSFPNRS
Trigger: GGACCTGTTGGGGAAGCTGCTGGCCCAATCAGATGATTCCGAGCAGACATTTCGAAGGGATAGCCTTATGTGCTTTGCTGTCTTGTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000148456.8
CDS CCA 90 bp ACCTTGCAGAGCCCGTCTTCTTGTTCAAGGGCAGATCCTGCATTTTaGTCTTCCTTCTGCTTGGCTTCTTCAGCCATGAGTTTACAGGCC +
Preference number: 5 (lower is better)
Translates to: TLQSPSSCSRADPAF*SSFCLASSAMSLQA
Trigger: GGCCTGTAAACTCATGGCTGAAGAAGCCAAGCAGAAGGAAGACCAAAATGCAGGATCTGCCCTTGAACAAGAAGACGGGCTCTGCAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS-3UTR CAA 90 bp CCAAGAGGAGCCTCTCCTTTTACTGGATGGAGAAATCGGGGACCTGGAAGCTTATGGTCTTCCTTCTGCTaGGCTTCTTCAGCCATGAGT +
Preference number: 5 (lower is better)
Translates to: PRGASPFTGWRNRGPGSLWSSFC*ASSAMS
Trigger: ACTCATGGCTGAAGAAGCCAAGCAGAAGGAAGACCA...TAAGCTTCCAGGTCCCCGATTTCTCCATCCAGTAAAAGGAGAGGCTCCTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CAA 90 bp TTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTTCTGCTACTTTCACCTaGCCCTGGACTAACATCAGC +
Preference number: 5 (lower is better)
Translates to: FSLGGELAAQHSFSVSSASATFT*PWTNIS
Trigger: GCTGATGTTAGTCCAGGGCAAGGTGAAAGTAGCAGA...AGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CAA 90 bp ATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCACCTTCAGGTCCCAGATaGCCTAGAGCTGATGCAGCA +
Preference number: 5 (lower is better)
Translates to: ISSSFSLGGELAAQHSFSPSGPR*PRADAA
Trigger: TGCTGCATCAGCTCTAGGCAATCTGGGACCTGAAGG...TGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CAA 90 bp AAATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTGGTTGGCCTCAGGAGTaGGATGAGCTTCCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: KSLLVSHLEGSWQLSTLSGWPQE*DELPAV
Trigger: CACTGCAGGAAGCTCATCCAACTCCTGAGGCCAACC...AGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS TCA 90 bp AGCTGTCGAGCATATGCACAATGTTGGGATGCCACAGACCCCGCATaGTTTCAATCTCTCGTTGCAGATTCCTCAGCTCTTTCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: SCRAYAQCWDATDPA*FQSLVADSSALSLS
Trigger: GCTCAGAGAAAGAGCTGAGGAATCTGCAACGAGAGATTGAAATCATGCGGGGTCTGTGGCATCCCAACATTGTGCATATGCTCGACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000113694.8
ENSMUST00000148456.8
CDS-3UTR CAA 90 bp CGTGTAGAGAGGAAGGGATTTTCTCTGGCACCAACAGTGATGAAGTTTACTGATCAGCGCACAGGGTCCTaGAGAATGAGGCTAACCAGC +
Preference number: 5 (lower is better)
Translates to: RVERKGFSLAPTVMKFTDQRTGS*RMRLTS
Trigger: GCTGGTTAGCCTCATTCTCAAGGACCCTGTGCGCTG...ATCAGTAAACTTCATCACTGTTGGTGCCAGAGAAAATCCCTTCCTCTCTACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CAA 90 bp TTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTCATCAGCTCCCTGCAAGAAGTTCTaGAAGCAGGAACTAATGGTG +
Preference number: 5 (lower is better)
Translates to: FSLGGELAAQHSFSVSSAPCKKF*KQELMV
Trigger: CACCATTAGTTCCTGCTTCAAGAACTTCTTGCAGGG...AGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CAA 90 bp CAATTCTCTAAACCAGGATCTTGTGTGAACAGGGTACAGGGCTTCCGGTGTCAGTCTGCTACTTTCACCTaGCCCTGGACTAACATCAGC +
Preference number: 5 (lower is better)
Translates to: QFSKPGSCVNRVQGFRCQSATFT*PWTNIS
Trigger: GCTGATGTTAGTCCAGGGCAAGGTGAAAGTAGCAGA...CTGACACCGGAAGCCCTGTACCCTGTTCACACAAGATCCTGGTTTAGAGAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CAA 90 bp CTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTCTGTGTTCACAAACTGCTaGAGAGAGGCAGAATCCGTG +
Preference number: 5 (lower is better)
Translates to: LLVSHLEGSWQLSTLSQSVFTNC*REAESV
Trigger: CACGGATTCTGCCTCTCTCAAGCAGTTTGTGAACAC...AGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CAA 90 bp TCAAAGCACCTTGCTTTACCTCTGTTTAGCCCCAGTCGTGTCTGTATTAGCTCCGCCAGACAGGAGCTCTaGGATAAAGGACAAGTGGCT +
Preference number: 5 (lower is better)
Translates to: SKHLALPLFSPSRVCISSARQEL*DKGQVA
Trigger: AGCCACTTGTCCTTTATCCAAGAGCTCCTGTCTGGC...GGAGCTAATACAGACACGACTGGGGCTAAACAGAGGTAAAGCAAGGTGCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CAA 90 bp TACTGGATGGAGAAATCGGGGACCTGGAAGCTTATCTCAGTCAAGCTTCCTAATCCTTCAGGTCCCAGATaGCCTAGAGCTGATGCAGCA +
Preference number: 5 (lower is better)
Translates to: YWMEKSGTWKLISVKLPNPSGPR*PRADAA
Trigger: TGCTGCATCAGCTCTAGGCAATCTGGGACCTGAAGG...ATTAGGAAGCTTGACTGAGATAAGCTTCCAGGTCCCCGATTTCTCCATCCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CAA 90 bp ATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCATTAATGCCACCACCCTaGGCGAGAAGAATGTTCTGC +
Preference number: 5 (lower is better)
Translates to: ISSSFSLGGELAAQHSFSLMPPP*ARRMFC
Trigger: GCAGAACATTCTTCTCGCCAAGGGTGGTGGCATTAA...TGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CAA 90 bp ATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCAGTGTTCACAAACTGCTaGAGAGAGGCAGAATCCGTG +
Preference number: 5 (lower is better)
Translates to: ISSSFSLGGELAAQHSFSVFTNC*REAESV
Trigger: CACGGATTCTGCCTCTCTCAAGCAGTTTGTGAACAC...TGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CAA 90 bp AAAATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCGCCAGACAGGAGCTCTaGGATAAAGGACAAGTGGCT +
Preference number: 5 (lower is better)
Translates to: KISSSFSLGGELAAQHSFARQEL*DKGQVA
Trigger: AGCCACTTGTCCTTTATCCAAGAGCTCCTGTCTGGC...GAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS-3UTR CAA 90 bp ATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTCACACTTTAATAGCTCCTaGCCCAATCCTTCAGGTCCC +
Preference number: 5 (lower is better)
Translates to: ISSSFSLGGELAAQHSFSHFNSS*PNPSGP
Trigger: GGGACCTGAAGGATTGGGCAAGGAGCTATTAAAGTG...TGAGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS GCA 90 bp TCTTTGTCAGTCTCAAAGCTGTCGAGCATATGCACAATGTTGGGATaGCACAGACCCCGCATGATTTCAATCTCTCGTTGCAGATTCCTC +
Preference number: 5 (lower is better)
Translates to: SLSVSKLSSICTMLG*HRPRMISISRCRFL
Trigger: GAGGAATCTGCAACGAGAGATTGAAATCATGCGGGGTCTGTGGCATCCCAACATTGTGCATATGCTCGACAGCTTTGAGACTGACAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000113694.8
ENSMUST00000148456.8
CDS-3UTR CAA 90 bp CCAAGAGGAGCCTCTCCTTTTACTGGATGGAGAAATCGGGGACCTGGAAGCTTAGATTTCAATCTCTCGTaGCAGATTCCTCAGCTCTTT +
Preference number: 5 (lower is better)
Translates to: PRGASPFTGWRNRGPGSLDFNLS*QIPQLF
Trigger: AAAGAGCTGAGGAATCTGCAACGAGAGATTGAAATC...TAAGCTTCCAGGTCCCCGATTTCTCCATCCAGTAAAAGGAGAGGCTCCTCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087183.11
CDS-3UTR CAA 90 bp AAATCTCTTCTAGTTTCTCACTTGGAGGGGAGTTGGCAGCTCAGCACTCTTTCTGATTTCAATCTCTCGTaGCAGATTCCTCAGCTCTTT +
Preference number: 5 (lower is better)
Translates to: KSLLVSHLEGSWQLSTLSDFNLS*QIPQLF
Trigger: AAAGAGCTGAGGAATCTGCAACGAGAGATTGAAATC...AGAAAGAGTGCTGAGCTGCCAACTCCCCTCCAAGTGAGAAACTAGAAGAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS GCA 72 bp ACGGAGAGCACCACAACGGGGAGAAACTCGGGCCCCTaGGGCGCCTGGCTCAGGTGGTGCAAGAAGCTGGGT +
Preference number: 6 (lower is better)
Translates to: TESTTTGRNSGP*GAWLRWCKKLG
Trigger: ACCCAGCTTCTTGCACCACCTGAGCCAGGCGCCGCAGGGGCCCGAGTTTCTCCCCGTTGTGGTGCTCTCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS GCA 72 bp AGGCAGGTCCCAAAGGCCCAGCCTGGTAGGCTGCATTaGCCACAGCAAAGCTGGCACTGCGTCGCACGGCAG +
Preference number: 6 (lower is better)
Translates to: RQVPKAQPGRLH*PQQSWHCVARQ
Trigger: CTGCCGTGCGACGCAGTGCCAGCTTTGCTGTGGGCAATGCAGCCTACCAGGCTGGGCCTTTGGGACCTGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS CCA 72 bp GGGAGAAACTCGGGCCCCTGCGGCGCCTGGCTCAGGTaGTGCAAGAAGCTGGGTGAAAGCAGGTGCTTCAGG +
Preference number: 6 (lower is better)
Translates to: GRNSGPCGAWLR*CKKLGESRCFR
Trigger: CCTGAAGCACCTGCTTTCACCCAGCTTCTTGCACCACCTGAGCCAGGCGCCGCAGGGGCCCGAGTTTCTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 72 bp ACCACAACGGGGAGAAACTCGGGCCCCTGCGGCGCCTaGCTCAGGTGGTGCAAGAAGCTGGGTGAAAGCAGG +
Preference number: 6 (lower is better)
Translates to: TTTGRNSGPCGA*LRWCKKLGESR
Trigger: CCTGCTTTCACCCAGCTTCTTGCACCACCTGAGCCAGGCGCCGCAGGGGCCCGAGTTTCTCCCCGTTGTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS GCA 72 bp AGTCAGCCGGACCTCTGCAGGGGCAGACAAGGCATGTaGAGCTGCAGCAATCCATTCCCGGGGCTGGAGGTC +
Preference number: 6 (lower is better)
Translates to: SQPDLCRGRQGM*SCSNPFPGLEV
Trigger: GACCTCCAGCCCCGGGAATGGATTGCTGCAGCTGCACATGCCTTGTCTGCCCCTGCAGAGGTCCGGCTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 72 bp CTGCTCCCGCAGCGGCTGGCTCACTTGTGGGGCTCCTaGTGGTGTGTGGAAAGGAAGCTGTGGGACTGTCAG +
Preference number: 6 (lower is better)
Translates to: LLPQRLAHLWGS*WCVERKLWDCQ
Trigger: CTGACAGTCCCACAGCTTCCTTTCCACACACCACCAGGAGCCCCACAAGTGAGCCAGCCGCTGCGGGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CAA 90 bp AGTGCTCTGCCGGCCCATCGCCTCTGGCCTCGGCTCTGGGAAGCCTaGTTCACACTCCAGGTTGATGTGGTTTTCCCGAGAGGTACGGGG +
Preference number: 6 (lower is better)
Translates to: SALPAHRLWPRLWEA*FTLQVDVVFPRGTG
Trigger: CCCCGTACCTCTCGGGAAAACCACATCAACCTGGAGTGTGAACAAGGCTTCCCAGAGCCGAGGCCAGAGGCGATGGGCCGGCAGAGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS GCA 72 bp CCGGACCTCTGCAGGGGCAGACAAGGCATGTGCAGCTaGAGCAATCCATTCCCGGGGCTGGAGGTCAAAGGT +
Preference number: 6 (lower is better)
Translates to: PDLCRGRQGMCS*SNPFPGLEVKG
Trigger: ACCTTTGACCTCCAGCCCCGGGAATGGATTGCTGCAGCTGCACATGCCTTGTCTGCCCCTGCAGAGGTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS GCA 72 bp CCTGGTAGGCTGCATTGCCCACAGCAAAGCTGGCACTaGGTCGCACGGCAGGGTCCTTGTCTCCAAGCCCTA +
Preference number: 6 (lower is better)
Translates to: PGRLHCPQQSWH*VARQGPCLQAL
Trigger: TAGGGCTTGGAGACAAGGACCCTGCCGTGCGACGCAGTGCCAGCTTTGCTGTGGGCAATGCAGCCTACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS GCA 72 bp ATCTCCAAGCAGCTGGGTCATACTGGGCACTGCAGCTaGCAAGGCAGGTCCCAAAGGCCCAGCCTGGTAGGC +
Preference number: 6 (lower is better)
Translates to: ISKQLGHTGHCS*QGRSQRPSLVG
Trigger: GCCTACCAGGCTGGGCCTTTGGGACCTGCCTTGGCAGCTGCAGTGCCCAGTATGACCCAGCTGCTTGGAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS GCA 72 bp CTGAGCATCTCCAAGCAGCTGGGTCATACTGGGCACTaGAGCTGCCAAGGCAGGTCCCAAAGGCCCAGCCTG +
Preference number: 6 (lower is better)
Translates to: LSISKQLGHTGH*SCQGRSQRPSL
Trigger: CAGGCTGGGCCTTTGGGACCTGCCTTGGCAGCTGCAGTGCCCAGTATGACCCAGCTGCTTGGAGATGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS CCA 72 bp AGGCTGGAGGGACTTGATAGTAGCAGGTCGTCTTCCTaGGCAGACACCTCCTCGGGCAGCCTCAGGGCCATG +
Preference number: 6 (lower is better)
Translates to: RLEGLDSSRSSS*ADTSSGSLRAM
Trigger: CATGGCCCTGAGGCTGCCCGAGGAGGTGTCTGCCCAGGAAGACGACCTGCTACTATCAAGTCCCTCCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CAA 90 bp ATCGCCTCTGGCCTCGGCTCTGGGAAGCCTTGTTCACACTCCAGGTaGATGTGGTTTTCCCGAGAGGTACGGGGTGCTTCTCCAGCCCCC +
Preference number: 6 (lower is better)
Translates to: IASGLGSGKPCSHSR*MWFSREVRGASPAP
Trigger: GGGGGCTGGAGAAGCACCCCGTACCTCTCGGGAAAACCACATCAACCTGGAGTGTGAACAAGGCTTCCCAGAGCCGAGGCCAGAGGCGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CAA 90 bp GGCTCCAGGTACATCTTCACTCTGCTCCCGCAGCGGCTGGCTCACTaGTGGGGCTCCTGGTGGTGTGTGGAAAGGAAGCTGTGGGACTGT +
Preference number: 6 (lower is better)
Translates to: GSRYIFTLLPQRLAH*WGSWWCVERKLWDC
Trigger: ACAGTCCCACAGCTTCCTTTCCACACACCACCAGGAGCCCCACAAGTGAGCCAGCCGCTGCGGGAGCAGAGTGAAGATGTACCTGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS TCA 72 bp ACGCCTTTCAGGATCTGCTCGCCAGTCCCGCGCAGCTaGCTCTGGATGCGCTGGCAGAAGTCAGGGTTACAC +
Preference number: 6 (lower is better)
Translates to: TPFRICSPVPRS*LWMRWQKSGLH
Trigger: GTGTAACCCTGACTTCTGCCAGCGCATCCAGAGTCAGCTGCGCGGGACTGGCGAGCAGATCCTGAAAGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000148456.8
CDS TCA 72 bp GGTGTGTGGAAAGGAAGCTGTGGGACTGTCAGGCCGTaGAGGAGGCCATCCAACACAGCGCGCTGTGTGGTC +
Preference number: 6 (lower is better)
Translates to: GVWKGSCGTVRP*RRPSNTARCVV
Trigger: GACCACACAGCGCGCTGTGTTGGATGGCCTCCTTCACGGCCTGACAGTCCCACAGCTTCCTTTCCACACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS GCA 72 bp GGCTCCTCATTTTCAGGATCCACTACATCAGTGCTCTaGCGGCCCATCGCCTCTGGCCTCGGCTCTGGGAAG +
Preference number: 6 (lower is better)
Translates to: GSSFSGSTTSVL*RPIASGLGSGK
Trigger: CTTCCCAGAGCCGAGGCCAGAGGCGATGGGCCGGCAGAGCACTGATGTAGTGGATCCTGAAAATGAGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS GCA 72 bp AGGGCAGAAGAGATGGCTCCAGGTACATCTTCACTCTaGTCCCGCAGCGGCTGGCTCACTTGTGGGGCTCCT +
Preference number: 6 (lower is better)
Translates to: RAEEMAPGTSSL*SRSGWLTCGAP
Trigger: AGGAGCCCCACAAGTGAGCCAGCCGCTGCGGGAGCAGAGTGAAGATGTACCTGGAGCCATCTCTTCTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 72 bp CCAGTATACCAGCCAAGAGGCTTGACTCCTGAGGAGTaGCCTTTAGTCCAGGCACGGGGGCTGTGCTGGGTG +
Preference number: 6 (lower is better)
Translates to: PVYQPRGLTPEE*PLVQARGLCWV
Trigger: CACCCAGCACAGCCCCCGTGCCTGGACTAAAGGCCACTCCTCAGGAGTCAAGCCTCTTGGCTGGTATACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 72 bp AGTGCTCTGCCGGCCCATCGCCTCTGGCCTCGGCTCTaGGAAGCCTTGTTCACACTCCAGGTTGATGTGGTT +
Preference number: 6 (lower is better)
Translates to: SALPAHRLWPRL*EALFTLQVDVV
Trigger: AACCACATCAACCTGGAGTGTGAACAAGGCTTCCCAGAGCCGAGGCCAGAGGCGATGGGCCGGCAGAGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 72 bp ATCCACTACATCAGTGCTCTGCCGGCCCATCGCCTCTaGCCTCGGCTCTGGGAAGCCTTGTTCACACTCCAG +
Preference number: 6 (lower is better)
Translates to: IHYISALPAHRL*PRLWEALFTLQ
Trigger: CTGGAGTGTGAACAAGGCTTCCCAGAGCCGAGGCCAGAGGCGATGGGCCGGCAGAGCACTGATGTAGTGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 72 bp GGGCCAGCAGCTTCCCCAACAGGTCCAAAAAGAGGCTaGCGGCCTCCTGAAACACCTGTAGGCTGTCACCTG +
Preference number: 6 (lower is better)
Translates to: GPAASPTGPKRG*RPPETPVGCHL
Trigger: CAGGTGACAGCCTACAGGTGTTTCAGGAGGCCGCCAGCCTCTTTTTGGACCTGTTGGGGAAGCTGCTGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000148456.8
CDS CCA 72 bp GGCCGTGAAGGAGGCCATCCAACACAGCGCGCTGTGTaGTCAACAGGCTGGAGTAGAAGGCTTTGGAGACGG +
Preference number: 6 (lower is better)
Translates to: GREGGHPTQRAV*STGWSRRLWRR
Trigger: CCGTCTCCAAAGCCTTCTACTCCAGCCTGTTGACCACACAGCGCGCTGTGTTGGATGGCCTCCTTCACGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 72 bp ATCTTCACTCTGCTCCCGCAGCGGCTGGCTCACTTGTaGGGCTCCTGGTGGTGTGTGGAAAGGAAGCTGTGG +
Preference number: 6 (lower is better)
Translates to: IFTLLPQRLAHL*GSWWCVERKLW
Trigger: CCACAGCTTCCTTTCCACACACCACCAGGAGCCCCACAAGTGAGCCAGCCGCTGCGGGAGCAGAGTGAAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 72 bp GCTCCAGGTACATCTTCACTCTGCTCCCGCAGCGGCTaGCTCACTTGTGGGGCTCCTGGTGGTGTGTGGAAA +
Preference number: 6 (lower is better)
Translates to: APGTSSLCSRSG*LTCGAPGGVWK
Trigger: TTTCCACACACCACCAGGAGCCCCACAAGTGAGCCAGCCGCTGCGGGAGCAGAGTGAAGATGTACCTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 72 bp TCCCATCCTGAGCATCTCCAAGCAGCTGGGTCATACTaGGCACTGCAGCTGCCAAGGCAGGTCCCAAAGGCC +
Preference number: 6 (lower is better)
Translates to: SHPEHLQAAGSY*ALQLPRQVPKA
Trigger: GGCCTTTGGGACCTGCCTTGGCAGCTGCAGTGCCCAGTATGACCCAGCTGCTTGGAGATGCTCAGGATGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS CAA 72 bp CCGGCCCATCGCCTCTGGCCTCGGCTCTGGGAAGCCTaGTTCACACTCCAGGTTGATGTGGTTTTCCCGAGA +
Preference number: 6 (lower is better)
Translates to: PAHRLWPRLWEA*FTLQVDVVFPR
Trigger: TCTCGGGAAAACCACATCAACCTGGAGTGTGAACAAGGCTTCCCAGAGCCGAGGCCAGAGGCGATGGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS TCA 72 bp CCAAGCCCTAGCAGCAGAAGGTTGAGCAGTCCTGACTaGCTCTGTAGTGCCCCACGTAGGGCCATGCTGTGC +
Preference number: 6 (lower is better)
Translates to: PSPSSRRLSSPD*LCSAPRRAMLC
Trigger: GCACAGCATGGCCCTACGTGGGGCACTACAGAGTCAGTCAGGACTGCTCAACCTTCTGCTGCTAGGGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS TCA 72 bp AAGACAGCAAAGCACTGCTCGCCAGTCCCGCGCAGCTaGCTCTGGATGCGCTGGCAGAAGTCAGGGTTACAC +
Preference number: 6 (lower is better)
Translates to: KTAKHCSPVPRS*LWMRWQKSGLH
Trigger: GTGTAACCCTGACTTCTGCCAGCGCATCCAGAGTCAGCTGCGCGGGACTGGCGAGCAGTGCTTTGCTGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087186.11
CDS GCA 72 bp TGTCTGGCTCCTCATTTTCAGGATCCACTACATCAGTaGTCTGCCGGCCCATCGCCTCTGGCCTCGGCTCTG +
Preference number: 6 (lower is better)
Translates to: CLAPHFQDPLHQ*SAGPSPLASAL
Trigger: CAGAGCCGAGGCCAGAGGCGATGGGCCGGCAGAGCACTGATGTAGTGGATCCTGAAAATGAGGAGCCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS GCA 72 bp GCCACCAGGTCCCGTAAGAGCGCCCCATACCAAGGTTaGTGCTGGATGCTGCTACTCTCCTGGCTGTACCTA +
Preference number: 6 (lower is better)
Translates to: ATRSRKSAPYQG*CWMLLLSWLYL
Trigger: TAGGTACAGCCAGGAGAGTAGCAGCATCCAGCAGCAACCTTGGTATGGGGCGCTCTTACGGGACCTGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000148456.8
CDS GCA 72 bp ACCTCCTCGGGCAGCCTCAGGGCCATGGAAAAGCGGTaGCACAGAATGGTCCACACCTCTGAACCAACCACA +
Preference number: 6 (lower is better)
Translates to: TSSGSLRAMEKR*HRMVHTSEPTT
Trigger: TGTGGTTGGTTCAGAGGTGTGGACCATTCTGTGGCACCGCTTTTCCATGGCCCTGAGGCTGCCCGAGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS GCA 72 bp AGCAGGTGCTTCAGGGTCAGCATGAGGACACTGCCATaGTGGGACAGGTGGCTCAGGCATAACTGGGACTCC +
Preference number: 6 (lower is better)
Translates to: SRCFRVSMRTLP*WDRWLRHNWDS
Trigger: GGAGTCCCAGTTATGCCTGAGCCACCTGTCCCAGCATGGCAGTGTCCTCATGCTGACCCTGAAGCACCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 72 bp GAGGAGTGGCCTTTAGTCCAGGCACGGGGGCTGTGCTaGGTGTCACCTTGCAGAGCCCGTCTTCTTGTTCAA +
Preference number: 6 (lower is better)
Translates to: EEWPLVQARGLC*VSPCRARLLVQ
Trigger: TTGAACAAGAAGACGGGCTCTGCAAGGTGACACCCAGCACAGCCCCCGTGCCTGGACTAAAGGCCACTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 72 bp GGCCATCCAACACAGCGCGCTGTGTGGTCAACAGGCTaGAGTAGAAGGCTTTGGAGACGGCCCAGCTGTTTC +
Preference number: 6 (lower is better)
Translates to: GHPTQRAVWSTG*SRRLWRRPSCF
Trigger: GAAACAGCTGGGCCGTCTCCAAAGCCTTCTACTCCAGCCTGTTGACCACACAGCGCGCTGTGTTGGATGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 72 bp TTGTGGGGCTCCTGGTGGTGTGTGGAAAGGAAGCTGTaGGACTGTCAGGCCGTGAAGGAGGCCATCCAACAC +
Preference number: 6 (lower is better)
Translates to: LWGSWWCVERKL*DCQAVKEAIQH
Trigger: GTGTTGGATGGCCTCCTTCACGGCCTGACAGTCCCACAGCTTCCTTTCCACACACCACCAGGAGCCCCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 72 bp AATGCCAAGAGACCTGCTCCTTGGCATCCCAACAGCTaGGCAGCCCCACAGGAGCAGTACACATGGCTGCCA +
Preference number: 6 (lower is better)
Translates to: NAKRPAPWHPNS*AAPQEQYTWLP
Trigger: TGGCAGCCATGTGTACTGCTCCTGTGGGGCTGCCCAGCTGTTGGGATGCCAAGGAGCAGGTCTCTTGGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 72 bp AGGTGCTTCAGGGTCAGCATGAGGACACTGCCATGCTaGGACAGGTGGCTCAGGCATAACTGGGACTCCTGG +
Preference number: 6 (lower is better)
Translates to: RCFRVSMRTLPC*DRWLRHNWDSW
Trigger: CCAGGAGTCCCAGTTATGCCTGAGCCACCTGTCCCAGCATGGCAGTGTCCTCATGCTGACCCTGAAGCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CAA 72 bp TACATCTTCACTCTGCTCCCGCAGCGGCTGGCTCACTaGTGGGGCTCCTGGTGGTGTGTGGAAAGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: YIFTLLPQRLAH*WGSWWCVERKL
Trigger: CAGCTTCCTTTCCACACACCACCAGGAGCCCCACAAGTGAGCCAGCCGCTGCGGGAGCAGAGTGAAGATGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CAA 90 bp AGGCACGGGGGCTGTGCTGGGTGTCACCTTGCAGAGCCCGTCTTCTaGTTCAAGGGCAGATCCTGCATTTTGGTCTTCCTTCTGCTTGGC +
Preference number: 6 (lower is better)
Translates to: RHGGCAGCHLAEPVF*FKGRSCILVFLLLG
Trigger: GCCAAGCAGAAGGAAGACCAAAATGCAGGATCTGCCCTTGAACAAGAAGACGGGCTCTGCAAGGTGACACCCAGCACAGCCCCCGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS TCA 72 bp GCCTCGGCTCTGGGAAGCCTTGTTCACACTCCAGGTTaGTGTGGTTTTCCCGAGAGGTACGGGGTGCTTCTC +
Preference number: 6 (lower is better)
Translates to: ASALGSLVHTPG*CGFPERYGVLL
Trigger: GAGAAGCACCCCGTACCTCTCGGGAAAACCACATCAACCTGGAGTGTGAACAAGGCTTCCCAGAGCCGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS TCA 72 bp TTCCCCAACAGGTCCAAAAAGAGGCTGGCGGCCTCCTaGAACACCTGTAGGCTGTCACCTGTCTGGCTCCTC +
Preference number: 6 (lower is better)
Translates to: FPNRSKKRLAAS*NTCRLSPVWLL
Trigger: GAGGAGCCAGACAGGTGACAGCCTACAGGTGTTTCAGGAGGCCGCCAGCCTCTTTTTGGACCTGTTGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000148456.8
CDS TCA 72 bp AGACCTGCAGCAGGCAGACTACCACTTCCGAGGCCCTaGGGTCAGCCAAGACACCTACAAGGAGGTCAGCAT +
Preference number: 6 (lower is better)
Translates to: RPAAGRLPLPRP*GQPRHLQGGQH
Trigger: ATGCTGACCTCCTTGTAGGTGTCTTGGCTGACCTCAGGGCCTCGGAAGTGGTAGTCTGCCTGCTGCAGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS TCA 72 bp CCTAGAGCTGATGCAGCATTGCGCCGGATCCCATCCTaGGCATCTCCAAGCAGCTGGGTCATACTGGGCACT +
Preference number: 6 (lower is better)
Translates to: PRADAALRRIPS*ASPSSWVILGT
Trigger: AGTGCCCAGTATGACCCAGCTGCTTGGAGATGCTCAGGATGGGATCCGGCGCAATGCTGCATCAGCTCTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS GCA 72 bp TGGCTCAGGTGGTGCAAGAAGCTGGGTGAAAGCAGGTaGTTCAGGGTCAGCATGAGGACACTGCCATGCTGG +
Preference number: 6 (lower is better)
Translates to: WLRWCKKLGESR*FRVSMRTLPCW
Trigger: CCAGCATGGCAGTGTCCTCATGCTGACCCTGAAGCACCTGCTTTCACCCAGCTTCTTGCACCACCTGAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS GCA 72 bp TCTGCTTGTAACAACGAAAGGTGGTGGCAGCAGACCTaGAGCAGGCAGACTACCACTTCCGAGGCCCTGAGG +
Preference number: 6 (lower is better)
Translates to: SACNNERWWQQT*SRQTTTSEALR
Trigger: CCTCAGGGCCTCGGAAGTGGTAGTCTGCCTGCTGCAGGTCTGCTGCCACCACCTTTCGTTGTTACAAGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS GCA 72 bp GGACCCGCACAGTGTTCTCTGAGTGGCCTAGGAGGCTaGGCAATGGCCGATAGGATTCATCAGAGCCAGACA +
Preference number: 6 (lower is better)
Translates to: GPAQCSLSGLGG*AMADRIHQSQT
Trigger: TGTCTGGCTCTGATGAATCCTATCGGCCATTGCGCAGCCTCCTAGGCCACTCAGAGAACACTGTGCGGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS CCA 72 bp GCAGCCCACAGACCAGAGGTCTGCGGTGTGGTCATATaGTCGCTCCTCCACCAGCTCTGGAGACATATAGAG +
Preference number: 6 (lower is better)
Translates to: AAHRPEVCGVVI*SLLHQLWRHIE
Trigger: CTCTATATGTCTCCAGAGCTGGTGGAGGAGCGACCATATGACCACACCGCAGACCTCTGGTCTGTGGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 72 bp GGCTCTGGGAAGCCTTGTTCACACTCCAGGTTGATGTaGTTTTCCCGAGAGGTACGGGGTGCTTCTCCAGCC +
Preference number: 6 (lower is better)
Translates to: GSGKPCSHSRLM*FSREVRGASPA
Trigger: GGCTGGAGAAGCACCCCGTACCTCTCGGGAAAACCACATCAACCTGGAGTGTGAACAAGGCTTCCCAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 72 bp AGGGTCAGCATGAGGACACTGCCATGCTGGGACAGGTaGCTCAGGCATAACTGGGACTCCTGGGTGAAGATG +
Preference number: 6 (lower is better)
Translates to: RVSMRTLPCWDR*LRHNWDSWVKM
Trigger: CATCTTCACCCAGGAGTCCCAGTTATGCCTGAGCCACCTGTCCCAGCATGGCAGTGTCCTCATGCTGACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CAA 72 bp GGCCTCGGCTCTGGGAAGCCTTGTTCACACTCCAGGTaGATGTGGTTTTCCCGAGAGGTACGGGGTGCTTCT +
Preference number: 6 (lower is better)
Translates to: GLGSGKPCSHSR*MWFSREVRGAS
Trigger: AGAAGCACCCCGTACCTCTCGGGAAAACCACATCAACCTGGAGTGTGAACAAGGCTTCCCAGAGCCGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CAA 90 bp GCTGCGCAATGGCCGATAGGATTCATCAGAGCCAGACAGGAGCTCTaGGATAAAGGACAAGTGGCTGGGGGACAGAATCCGGGCTGTGTG +
Preference number: 6 (lower is better)
Translates to: AAQWPIGFIRARQEL*DKGQVAGGQNPGCV
Trigger: CACACAGCCCGGATTCTGTCCCCCAGCCACTTGTCCTTTATCCAAGAGCTCCTGTCTGGCTCTGATGAATCCTATCGGCCATTGCGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS TCA 72 bp GGTGGAGGCACAGGACATGGTGTCGCAGACCAGAGATaGGGGATGGCCTCAGTTGGCTGCTGTCTTCAGTTA +
Preference number: 6 (lower is better)
Translates to: GGGTGHGVADQR*GMASVGCCLQL
Trigger: TAACTGAAGACAGCAGCCAACTGAGGCCATCCCTCATCTCTGGTCTGCGACACCATGTCCTGTGCCTCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS TCA 72 bp CATGGAAAAGCGGTGCCACAGAATGGTCCACACCTCTaGACCAACCACATCCCTGATCAGGCCAGGCTTCCC +
Preference number: 6 (lower is better)
Translates to: HGKAVPQNGPHL*TNHIPDQARLP
Trigger: GGGAAGCCTGGCCTGATCAGGGATGTGGTTGGTTCAGAGGTGTGGACCATTCTGTGGCACCGCTTTTCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS TCA 72 bp CAGGGTCCTTGTCTCCAAGCCCTAGCAGCAGAAGGTTaGGCAGTCCTGACTGACTCTGTAGTGCCCCACGTA +
Preference number: 6 (lower is better)
Translates to: QGPCLQALAAEG*AVLTDSVVPHV
Trigger: TACGTGGGGCACTACAGAGTCAGTCAGGACTGCTCAACCTTCTGCTGCTAGGGCTTGGAGACAAGGACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS GCA 72 bp ACCAGGTCCCGTAAGAGCGCCCCATACCAAGGTTGCTaGTGGATGCTGCTACTCTCCTGGCTGTACCTAAGA +
Preference number: 6 (lower is better)
Translates to: TRSRKSAPYQGC*WMLLLSWLYLR
Trigger: TCTTAGGTACAGCCAGGAGAGTAGCAGCATCCAGCAGCAACCTTGGTATGGGGCGCTCTTACGGGACCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000148456.8
CDS CCA 72 bp TTCTGCTTGGCTTCTTCAGCCATGAGTTTACAGGCCTaGCGCAGGATGCGAGACTGGTTACCCTTGGGTGCG +
Preference number: 6 (lower is better)
Translates to: FCLASSAMSLQA*RRMRDWLPLGA
Trigger: CGCACCCAAGGGTAACCAGTCTCGCATCCTGCGCCAGGCCTGTAAACTCATGGCTGAAGAAGCCAAGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 72 bp CCATACCAAGGTTGCTGCTGGATGCTGCTACTCTCCTaGCTGTACCTAAGAAGGCTGAGAGGCAGCTCAGGC +
Preference number: 6 (lower is better)
Translates to: PYQGCCWMLLLS*LYLRRLRGSSG
Trigger: GCCTGAGCTGCCTCTCAGCCTTCTTAGGTACAGCCAGGAGAGTAGCAGCATCCAGCAGCAACCTTGGTATGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000148456.8
CDS CCA 72 bp CCAATGGGCAGCTCTGCTTGTAACAACGAAAGGTGGTaGCAGCAGACCTGCAGCAGGCAGACTACCACTTCC +
Preference number: 6 (lower is better)
Translates to: PMGSSACNNERW*QQTCSRQTTTS
Trigger: GGAAGTGGTAGTCTGCCTGCTGCAGGTCTGCTGCCACCACCTTTCGTTGTTACAAGCAGAGCTGCCCATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 72 bp AGGCCAATGGGCAGCTCTGCTTGTAACAACGAAAGGTaGTGGCAGCAGACCTGCAGCAGGCAGACTACCACT +
Preference number: 6 (lower is better)
Translates to: RPMGSSACNNER*WQQTCSRQTTT
Trigger: AGTGGTAGTCTGCCTGCTGCAGGTCTGCTGCCACCACCTTTCGTTGTTACAAGCAGAGCTGCCCATTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 72 bp TCAGAGCCAGACAGGAGCTCTTGGATAAAGGACAAGTaGCTGGGGGACAGAATCCGGGCTGTGTGTGTCAGC +
Preference number: 6 (lower is better)
Translates to: SEPDRSSWIKDK*LGDRIRAVCVS
Trigger: GCTGACACACACAGCCCGGATTCTGTCCCCCAGCCACTTGTCCTTTATCCAAGAGCTCCTGTCTGGCTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS CAA 72 bp AGCGGTGTGCCTTTGATCGACGTCAGCACCATGGTGTaGGTGCTCATAGCTCGGGCGAATCTGGTCTTCAGG +
Preference number: 6 (lower is better)
Translates to: SGVPLIDVSTMV*VLIARANLVFR
Trigger: CCTGAAGACCAGATTCGCCCGAGCTATGAGCACCAACACCATGGTGCTGACGTCGATCAAAGGCACACCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189830.2
CDS TCA 72 bp CTGTGTGTGTCAGCAGGGACAGGAGGTCAGAGATCATaGGGGGCTGGTCACTCAGGAGAACAACAGAGAGGA +
Preference number: 6 (lower is better)
Translates to: LCVSAGTGGQRS*GAGHSGEQQRG
Trigger: TCCTCTCTGTTGTTCTCCTGAGTGACCAGCCCCTCATGATCTCTGACCTCCTGTCCCTGCTGACACACACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS GCA 72 bp TGCACAGGCCCAGGCTCGCTGGTCTCTAGTAGGCGTTaGCACTCATCATCACTGTCTGGCTCCTCATTTTCA +
Preference number: 6 (lower is better)
Translates to: CTGPGSLVSSRR*HSSSLSGSSFS
Trigger: TGAAAATGAGGAGCCAGACAGTGATGATGAGTGGCAACGCCTACTAGAGACCAGCGAGCCTGGGCCTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS GCA 72 bp ATGGCTCTAGAAGAGGTGGCCACTGTGTTCACAAACTaGTTGAGAGAGGCAGAATCCGTGAGGGCCAGGCGT +
Preference number: 6 (lower is better)
Translates to: MALEEVATVFTN*LREAESVRARR
Trigger: ACGCCTGGCCCTCACGGATTCTGCCTCTCTCAAGCAGTTTGTGAACACAGTGGCCACCTCTTCTAGAGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS GCA 72 bp GGAGCCGCTGGGGTACTTGGCACTTTAATAGCTCCTTaGCCAATCCTTCAGGTCCCAGATTGCCTAGAGCTG +
Preference number: 6 (lower is better)
Translates to: GAAGVLGTLIAP*PILQVPDCLEL
Trigger: CAGCTCTAGGCAATCTGGGACCTGAAGGATTGGGCAAGGAGCTATTAAAGTGCCAAGTACCCCAGCGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS CCA 72 bp TGCGGTGTGGTCATATGGTCGCTCCTCCACCAGCTCTaGAGACATATAGAGCGGTGTGCCTTTGATCGACGT +
Preference number: 6 (lower is better)
Translates to: CGVVIWSLLHQL*RHIERCAFDRR
Trigger: ACGTCGATCAAAGGCACACCGCTCTATATGTCTCCAGAGCTGGTGGAGGAGCGACCATATGACCACACCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 72 bp AGGAGACTACTCAGGATGCGGAGTACAGGAAGGAGGTaGGACACACCATCCAGAACGCCTTTCAGGATCTGC +
Preference number: 6 (lower is better)
Translates to: RRLLRMRSTGRR*DTPSRTPFRIC
Trigger: GCAGATCCTGAAAGGCGTTCTGGATGGTGTGTCCCACCTCCTTCCTGTACTCCGCATCCTGAGTAGTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000148456.8
CDS CCA 72 bp AGAAGGCTGAGAGGCAGCTCAGGCAGTCCTGCCTCCTaGCAGAAGGAATACAAGAGCACAGAGTCATTGCAG +
Preference number: 6 (lower is better)
Translates to: RRLRGSSGSPAS*QKEYKSTESLQ
Trigger: CTGCAATGACTCTGTGCTCTTGTATTCCTTCTGCCAGGAGGCAGGACTGCCTGAGCTGCCTCTCAGCCTTCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000148456.8
CDS CCA 72 bp AGGGATGGCCTCAGTTGGCTGCTGTCTTCAGTTAGCTaGTTGGCCAAATGCCAAGAGACCTGCTCCTTGGCA +
Preference number: 6 (lower is better)
Translates to: RDGLSWLLSSVS*LAKCQETCSLA
Trigger: TGCCAAGGAGCAGGTCTCTTGGCATTTGGCCAACCAGCTAACTGAAGACAGCAGCCAACTGAGGCCATCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 72 bp TGGTGTCGCAGACCAGAGATGAGGGATGGCCTCAGTTaGCTGCTGTCTTCAGTTAGCTGGTTGGCCAAATGC +
Preference number: 6 (lower is better)
Translates to: WCRRPEMRDGLS*LLSSVSWLAKC
Trigger: GCATTTGGCCAACCAGCTAACTGAAGACAGCAGCCAACTGAGGCCATCCCTCATCTCTGGTCTGCGACACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CAA 72 bp CAGCGACACCAGCACCTGATGAATACAGGACTCCTGTaGGAGGCTTCGAAGGGCAATGAGGGCAGCCTCTTT +
Preference number: 6 (lower is better)
Translates to: QRHQHLMNTGLL*EASKGNEGSLF
Trigger: AAAGAGGCTGCCCTCATTGCCCTTCGAAGCCTCCAACAGGAGTCCTGTATTCATCAGGTGCTGGTGTCGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS CAA 90 bp GGCAGTCCTGCCTCCTGGCAGAAGGAATACAAGAGCACAGAGTCATaGCAGCTGGATAGGAGACTACTCAGGATGCGGAGTACAGGAAGG +
Preference number: 6 (lower is better)
Translates to: GSPASWQKEYKSTES*QLDRRLLRMRSTGR
Trigger: CCTTCCTGTACTCCGCATCCTGAGTAGTCTCCTATCCAGCTGCAATGACTCTGTGCTCTTGTATTCCTTCTGCCAGGAGGCAGGACTGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000148456.8
CDS TCA 72 bp GAGACAGGCTGCCGCATTCACAAGAGAGACGACATGTaGGTGGGTAAAGAGAGTAGCAACCTCACTGCCCAG +
Preference number: 6 (lower is better)
Translates to: ETGCRIHKRDDM*VGKESSNLTAQ
Trigger: CTGGGCAGTGAGGTTGCTACTCTCTTTACCCACTCACATGTCGTCTCTCTTGTGAATGCGGCAGCCTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS GCA 72 bp GGATGCCACAGACCCCGCATGATTTCAATCTCTCGTTaGAGATTCCTCAGCTCTTTCTCTGAGCGCCCCAGT +
Preference number: 6 (lower is better)
Translates to: GCHRPRMISISR*RFLSSFSERPS
Trigger: ACTGGGGCGCTCAGAGAAAGAGCTGAGGAATCTGCAACGAGAGATTGAAATCATGCGGGGTCTGTGGCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000113694.8
ENSMUST00000148456.8
CDS GCA 72 bp AGTTGGCTGCTGTCTTCAGTTAGCTGGTTGGCCAAATaGCAAGAGACCTGCTCCTTGGCATCCCAACAGCTG +
Preference number: 6 (lower is better)
Translates to: SWLLSSVSWLAK*QETCSLASQQL
Trigger: CAGCTGTTGGGATGCCAAGGAGCAGGTCTCTTGGCATTTGGCCAACCAGCTAACTGAAGACAGCAGCCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS GCA 72 bp CCTCAGTGGACTCTTCCCAATCTGCTACTTTCACCTTaGCCTGGACTAACATCAGCAGCGACTCCAAGGCCA +
Preference number: 6 (lower is better)
Translates to: PQWTLPNLLLSP*PGLTSAATPRP
Trigger: TGGCCTTGGAGTCGCTGCTGATGTTAGTCCAGGGCAAGGTGAAAGTAGCAGATTGGGAAGAGTCCACTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS GCA 72 bp GTCCTGACTGACTCTGTAGTGCCCCACGTAGGGCCATaGTGTGCTGTAATAAATGTCCCAGGAGCCCATATG +
Preference number: 6 (lower is better)
Translates to: VLTDSVVPHVGP*CAVINVPGAHM
Trigger: CATATGGGCTCCTGGGACATTTATTACAGCACAGCATGGCCCTACGTGGGGCACTACAGAGTCAGTCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS CCA 72 bp CAGGCTGCCGCATTCACAAGAGAGACGACATGTGAGTaGGTAAAGAGAGTAGCAACCTCACTGCCCAGCTTC +
Preference number: 6 (lower is better)
Translates to: QAAAFTRETTCE*VKRVATSLPSF
Trigger: GAAGCTGGGCAGTGAGGTTGCTACTCTCTTTACCCACTCACATGTCGTCTCTCTTGTGAATGCGGCAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CAA 72 bp AGCGGTGTGCCTTTGATCGACGTCAGCACCATGGTGTaGGTGCTCATAGCTCGGGCGAATCCAAAGTCACAA +
Preference number: 6 (lower is better)
Translates to: SGVPLIDVSTMV*VLIARANPKSQ
Trigger: TTGTGACTTTGGATTCGCCCGAGCTATGAGCACCAACACCATGGTGCTGACGTCGATCAAAGGCACACCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CAA 72 bp GGCTGTGCTGGGTGTCACCTTGCAGAGCCCGTCTTCTaGTTCAAGGGCAGATCCTGCATTTTGGTCTTCCTT +
Preference number: 6 (lower is better)
Translates to: GCAGCHLAEPVF*FKGRSCILVFL
Trigger: AAGGAAGACCAAAATGCAGGATCTGCCCTTGAACAAGAAGACGGGCTCTGCAAGGTGACACCCAGCACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CAA 72 bp ACCTCAGTGGACTCTTCCCAATCTGCTACTTTCACCTaGCCCTGGACTAACATCAGCAGCGACTCCAAGGCC +
Preference number: 6 (lower is better)
Translates to: TSVDSSQSATFT*PWTNISSDSKA
Trigger: GGCCTTGGAGTCGCTGCTGATGTTAGTCCAGGGCAAGGTGAAAGTAGCAGATTGGGAAGAGTCCACTGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CAA 72 bp TGGCCGATAGGATTCATCAGAGCCAGACAGGAGCTCTaGGATAAAGGACAAGTGGCTGGGGGACAGAATCCG +
Preference number: 6 (lower is better)
Translates to: WPIGFIRARQEL*DKGQVAGGQNP
Trigger: CGGATTCTGTCCCCCAGCCACTTGTCCTTTATCCAAGAGCTCCTGTCTGGCTCTGATGAATCCTATCGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS CAA 90 bp GCCATTTCTAGGAGCCGCTGGGGTACTTGGCACTTTAATAGCTCCTaGCCCAATCCTTCAGGTCCCAGATTGCCTAGAGCTGATGCAGCA +
Preference number: 6 (lower is better)
Translates to: AISRSRWGTWHFNSS*PNPSGPRLPRADAA
Trigger: TGCTGCATCAGCTCTAGGCAATCTGGGACCTGAAGGATTGGGCAAGGAGCTATTAAAGTGCCAAGTACCCCAGCGGCTCCTAGAAATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS GCA 72 bp AGTTTAATGCCACCACCCTTGGCGAGAAGAATGTTCTaGGGTTTCATGTCGCGGTGTAGGATGCGGTGGGAA +
Preference number: 6 (lower is better)
Translates to: SLMPPPLARRMF*GFMSRCRMRWE
Trigger: TTCCCACCGCATCCTACACCGCGACATGAAACCGCAGAACATTCTTCTCGCCAAGGGTGGTGGCATTAAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000113694.8
ENSMUST00000148456.8
CDS GCA 72 bp TTAATAGCTCCTTGCCCAATCCTTCAGGTCCCAGATTaGCTAGAGCTGATGCAGCATTGCGCCGGATCCCAT +
Preference number: 6 (lower is better)
Translates to: LIAPCPILQVPD*LELMQHCAGSH
Trigger: ATGGGATCCGGCGCAATGCTGCATCAGCTCTAGGCAATCTGGGACCTGAAGGATTGGGCAAGGAGCTATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS CCA 72 bp ACTGATTCCCCAAAGAGAGCAAGGCTAACTTCTCACTaGCACCCAGCGACACCAGCACCTGATGAATACAGG +
Preference number: 6 (lower is better)
Translates to: TDSPKRARLTSH*HPATPAPDEYR
Trigger: CCTGTATTCATCAGGTGCTGGTGTCGCTGGGTGCCAGTGAGAAGTTAGCCTTGCTCTCTTTGGGGAATCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS CAA 72 bp TTTAATAGCTCCTTGCCCAATCCTTCAGGTCCCAGATaGCCTAGAGCTGATGCAGCATTGCGCCGGATCCCA +
Preference number: 6 (lower is better)
Translates to: FNSSLPNPSGPR*PRADAALRRIP
Trigger: TGGGATCCGGCGCAATGCTGCATCAGCTCTAGGCAATCTGGGACCTGAAGGATTGGGCAAGGAGCTATTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS TCA 72 bp TTCAATCTCTCGTTGCAGATTCCTCAGCTCTTTCTCTaGGCGCCCCAGTTTGGGGATGAACTTCAAGGCCAC +
Preference number: 6 (lower is better)
Translates to: FNLSLQIPQLFL*APQFGDELQGH
Trigger: GTGGCCTTGAAGTTCATCCCCAAACTGGGGCGCTCAGAGAAAGAGCTGAGGAATCTGCAACGAGAGATTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000113694.8
ENSMUST00000148456.8
CDS GCA 72 bp CTTGCAGAGCCCGTCTTCTTGTTCAAGGGCAGATCCTaGATTTTGGTCTTCCTTCTGCTTGGCTTCTTCAGC +
Preference number: 6 (lower is better)
Translates to: LAEPVFLFKGRS*ILVFLLLGFFS
Trigger: GCTGAAGAAGCCAAGCAGAAGGAAGACCAAAATGCAGGATCTGCCCTTGAACAAGAAGACGGGCTCTGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS GCA 72 bp ACAGCAAAGCACATAAGGCTATCCCTTCGAAATGTCTaGTCGGAATCATCTGATTGGGCCAGCAGCTTCCCC +
Preference number: 6 (lower is better)
Translates to: TAKHIRLSLRNV*SESSDWASSFP
Trigger: GGGGAAGCTGCTGGCCCAATCAGATGATTCCGAGCAGACATTTCGAAGGGATAGCCTTATGTGCTTTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000148456.8
CDS CCA 72 bp CTATCCCTTCGAAATGTCTGCTCGGAATCATCTGATTaGGCCAGCAGCTTCCCCAACAGGTCCAAAAAGAGG +
Preference number: 6 (lower is better)
Translates to: LSLRNVCSESSD*ASSFPNRSKKR
Trigger: CCTCTTTTTGGACCTGTTGGGGAAGCTGCTGGCCCAATCAGATGATTCCGAGCAGACATTTCGAAGGGATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000148456.8
CDS CCA 72 bp TCTCCACATGCCATTTCTAGGAGCCGCTGGGGTACTTaGCACTTTAATAGCTCCTTGCCCAATCCTTCAGGT +
Preference number: 6 (lower is better)
Translates to: SPHAISRSRWGT*HFNSSLPNPSG
Trigger: ACCTGAAGGATTGGGCAAGGAGCTATTAAAGTGCCAAGTACCCCAGCGGCTCCTAGAAATGGCATGTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
CDS GCA 72 bp GTCTCAAAGCTGTCGAGCATATGCACAATGTTGGGATaGCACAGACCCCGCATGATTTCAATCTCTCGTTGC +
Preference number: 6 (lower is better)
Translates to: VSKLSSICTMLG*HRPRMISISRC
Trigger: GCAACGAGAGATTGAAATCATGCGGGGTCTGTGGCATCCCAACATTGTGCATATGCTCGACAGCTTTGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000113694.8
ENSMUST00000148456.8
CDS GCA 72 bp TGTTCAAGGGCAGATCCTGCATTTTGGTCTTCCTTCTaGTTGGCTTCTTCAGCCATGAGTTTACAGGCCTGG +
Preference number: 6 (lower is better)
Translates to: CSRADPAFWSSF*LASSAMSLQAW
Trigger: CCAGGCCTGTAAACTCATGGCTGAAGAAGCCAAGCAGAAGGAAGACCAAAATGCAGGATCTGCCCTTGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS GCA 72 bp TTGGAGCCGAAAGACAAGAAGGGACAGGAGGTAAAGTaGCACCTCAGTGGACTCTTCCCAATCTGCTACTTT +
Preference number: 6 (lower is better)
Translates to: LEPKDKKGQEVK*HLSGLFPICYF
Trigger: AAAGTAGCAGATTGGGAAGAGTCCACTGAGGTGGCACTTTACCTCCTGTCCCTTCTTGTCTTTCGGCTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000148456.8
CDS CCA 72 bp GGCAGAAGGAATACAAGAGCACAGAGTCATTGCAGCTaGATAGGAGACTACTCAGGATGCGGAGTACAGGAA +
Preference number: 6 (lower is better)
Translates to: GRRNTRAQSHCS*IGDYSGCGVQE
Trigger: TTCCTGTACTCCGCATCCTGAGTAGTCTCCTATCCAGCTGCAATGACTCTGTGCTCTTGTATTCCTTCTGCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087183.11
ENSMUST00000148456.8
CDS CAA 90 bp ACCACCTCTTTGTCAGTCTCAAAGCTGTCGAGCATATGCACAATGTaGGGATGCCACAGACCCCGCATGATTTCAATCTCTCGTTGCAGA +
Preference number: 6 (lower is better)
Translates to: TTSLSVSKLSSICTM*GCHRPRMISISRCR
Trigger: TCTGCAACGAGAGATTGAAATCATGCGGGGTCTGTGGCATCCCAACATTGTGCATATGCTCGACAGCTTTGAGACTGACAAAGAGGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000113694.8
ENSMUST00000148456.8
CDS TCA 72 bp GCATATGCACAATGTTGGGATGCCACAGACCCCGCATaGTTTCAATCTCTCGTTGCAGATTCCTCAGCTCTT +
Preference number: 6 (lower is better)
Translates to: AYAQCWDATDPA*FQSLVADSSAL
Trigger: AAGAGCTGAGGAATCTGCAACGAGAGATTGAAATCATGCGGGGTCTGTGGCATCCCAACATTGTGCATATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000113694.8
ENSMUST00000148456.8
CDS CAA 72 bp TTGTCAGTCTCAAAGCTGTCGAGCATATGCACAATGTaGGGATGCCACAGACCCCGCATGATTTCAATCTCT +
Preference number: 6 (lower is better)
Translates to: LSVSKLSSICTM*GCHRPRMISIS
Trigger: AGAGATTGAAATCATGCGGGGTCTGTGGCATCCCAACATTGTGCATATGCTCGACAGCTTTGAGACTGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087183.11
ENSMUST00000087186.11
ENSMUST00000113694.8
ENSMUST00000148456.8