Pregenerated sensors for STK35 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037885Ensembl transcript IDs: ENSMUST00000165413.9, ENSMUST00000166282.3
Found 226 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTCCCTCCGGGCTTCTCCGCCTTCACCACCACTGCAGTTACTACTaGCAGTGCCACAAAGGAGGCCAGGCCCTATCCAGAGTCAGACCT | + |
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Preference number: 1 (lower is better) Translates to: APSGLLRLHHHCSYY*QCHKGGQALSRVRP Trigger: AGGTCTGACTCTGGATAGGGCCTGGCCTCCTTTGTGGCACTGCCAGTAGTAACTGCAGTGGTGGTGAAGGCGGAGAAGCCCGGAGGGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR TCA 90 bp | GAGGAAAAGGATGTCCATCTCCAAGAGGGACAGGGAGCTGGACTCTaGGAAGACTGCAGAGCCCACAGGGGTCCTGACCCACCAGCCACA | + |
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Preference number: 1 (lower is better) Translates to: EEKDVHLQEGQGAGL*EDCRAHRGPDPPAT Trigger: TGTGGCTGGTGGGTCAGGACCCCTGTGGGCTCTGCAGTCTTCTCAGAGTCCAGCTCCCTGTCCCTCTTGGAGATGGACATCCTTTTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR GCA 90 bp | TGTGGGAGGTCCAGCTGTCAGGAGATCACCACCACCTGTACCCTCTaGCATCCTGTCCGAGACACGATGAGACTGTGGGTCCCGAAGGAT | + |
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Preference number: 1 (lower is better) Translates to: CGRSSCQEITTTCTL*HPVRDTMRLWVPKD Trigger: ATCCTTCGGGACCCACAGTCTCATCGTGTCTCGGACAGGATGGCAGAGGGTACAGGTGGTGGTGATCTCCTGACAGCTGGACCTCCCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
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| 3UTR GCA 90 bp | ATGAGCTCGGAATCAGAGAAGGCAGAAGCCTCAGCCTCCAGAGTCTaGTGGCCTGGAGGGCCGAAGCAGCAATCTCAGCCAATTCGGAGG | + |
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Preference number: 1 (lower is better) Translates to: MSSESEKAEASASRV*WPGGPKQQSQPIRR Trigger: CCTCCGAATTGGCTGAGATTGCTGCTTCGGCCCTCCAGGCCAGCAGACTCTGGAGGCTGAGGCTTCTGCCTTCTCTGATTCCGAGCTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR CCA 90 bp | GGAATCAGAGAAGGCAGAAGCCTCAGCCTCCAGAGTCTGCTGGCCTaGAGGGCCGAAGCAGCAATCTCAGCCAATTCGGAGGTAGACTCC | + |
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Preference number: 1 (lower is better) Translates to: GIREGRSLSLQSLLA*RAEAAISANSEVDS Trigger: GGAGTCTACCTCCGAATTGGCTGAGATTGCTGCTTCGGCCCTCCAGGCCAGCAGACTCTGGAGGCTGAGGCTTCTGCCTTCTCTGATTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR CCA 90 bp | AACTTTGGTGCTGAGTTGCCTACCAGAAGGCTGGAAAGAGAAACGTaGACAGCGCTGCTAAGCGGGGCCAGCTGTCAGGGTCAGCTGTGC | + |
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Preference number: 1 (lower is better) Translates to: NFGAELPTRRLERET*TALLSGASCQGQLC Trigger: GCACAGCTGACCCTGACAGCTGGCCCCGCTTAGCAGCGCTGTCCACGTTTCTCTTTCCAGCCTTCTGGTAGGCAACTCAGCACCAAAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR CCA 90 bp | AGCCACAGCACAGCAAGCATGTCCTGGGGCCAGCCTGCAGCTGGCTaGCAGGTGATAGATAGCAGGGACTACAGGGAGGGAAGAATGAAA | + |
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Preference number: 1 (lower is better) Translates to: SHSTASMSWGQPAAG*QVIDSRDYREGRMK Trigger: TTTCATTCTTCCCTCCCTGTAGTCCCTGCTATCTATCACCTGCCAGCCAGCTGCAGGCTGGCCCCAGGACATGCTTGCTGTGCTGTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR CCA 90 bp | CACTGGAGCCAGAGAAAGAGGTGCAATCTCCAGGCCAGAAGCAGCTaGGATTCATGGAAGAGAAGGTGCAGGGAAGCAGGCTACCCCTCA | + |
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Preference number: 1 (lower is better) Translates to: HWSQRKRCNLQARSS*DSWKRRCREAGYPS Trigger: TGAGGGGTAGCCTGCTTCCCTGCACCTTCTCTTCCATGAATCCCAGCTGCTTCTGGCCTGGAGATTGCACCTCTTTCTCTGGCTCCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR TCA 90 bp | AAGGCTCCTTTCCCTCAAAGTCAGGCCTGTGCTGACCTGTGTGCATaGGCTCGGAATCAGAGAAGGCAGAAGCCTCAGCCTCCAGAGTCT | + |
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Preference number: 1 (lower is better) Translates to: KAPFPQSQACADLCA*ARNQRRQKPQPPES Trigger: AGACTCTGGAGGCTGAGGCTTCTGCCTTCTCTGATTCCGAGCTCATGCACACAGGTCAGCACAGGCCTGACTTTGAGGGAAAGGAGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR CCA 90 bp | AGGGACTACAGGGAGGGAAGAATGAAAACAGCAGGAGGAGGCACTTaGGGCTCAAGACATGGCTCTCACTGGAGCCAGAGAAAGAGGTGC | + |
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Preference number: 1 (lower is better) Translates to: RDYREGRMKTAGGGT*GSRHGSHWSQRKRC Trigger: GCACCTCTTTCTCTGGCTCCAGTGAGAGCCATGTCTTGAGCCCCAAGTGCCTCCTCCTGCTGTTTTCATTCTTCCCTCCCTGTAGTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR CCA 90 bp | AGGAAGGGGCACATCAGAGTAAGGCGAGGGCCGTACAGTCCCTCCTaGGAGGACAGCAGTCAAACTCTTGCTCTTCCCACTCTTCAAGAT | + |
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Preference number: 1 (lower is better) Translates to: RKGHIRVRRGPYSPS*EDSSQTLALPTLQD Trigger: ATCTTGAAGAGTGGGAAGAGCAAGAGTTTGACTGCTGTCCTCCCAGGAGGGACTGTACGGCCCTCGCCTTACTCTGATGTGCCCCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR TCA 90 bp | CATGTGTCCAGACAAGGCTCCTTTCCCTCAAAGTCAGGCCTGTGCTaGCCTGTGTGCATGAGCTCGGAATCAGAGAAGGCAGAAGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: HVSRQGSFPSKSGLC*PVCMSSESEKAEAS Trigger: TGAGGCTTCTGCCTTCTCTGATTCCGAGCTCATGCACACAGGTCAGCACAGGCCTGACTTTGAGGGAAAGGAGCCTTGTCTGGACACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR TCA 90 bp | CCCACTTGTTCTGGCACTCTCCCCAATACTAGGGGCCCTAGGCAATaGATGGTAGCAGACTTGGCCCTCAGTAATGGCTGTGGATACCGA | + |
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Preference number: 1 (lower is better) Translates to: PTCSGTLPNTRGPRQ*MVADLALSNGCGYR Trigger: TCGGTATCCACAGCCATTACTGAGGGCCAAGTCTGCTACCATTCATTGCCTAGGGCCCCTAGTATTGGGGAGAGTGCCAGAACAAGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR GCA 90 bp | CTAGCTGCTACATGGGCCTCTATTAGCCACCTGGACACTCCCATCTaGCTCAGACCTCCCTCTTCAAGGCAGGTCCTTTCTCTGCTTATC | + |
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Preference number: 1 (lower is better) Translates to: LAATWASISHLDTPI*LRPPSSRQVLSLLI Trigger: GATAAGCAGAGAAAGGACCTGCCTTGAAGAGGGAGGTCTGAGGCAGATGGGAGTGTCCAGGTGGCTAATAGAGGCCCATGTAGCAGCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR GCA 90 bp | ACTTGGGGCTCAAGACATGGCTCTCACTGGAGCCAGAGAAAGAGGTaGAATCTCCAGGCCAGAAGCAGCTGGGATTCATGGAAGAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: TWGSRHGSHWSQRKR*NLQARSSWDSWKRR Trigger: CCTTCTCTTCCATGAATCCCAGCTGCTTCTGGCCTGGAGATTGCACCTCTTTCTCTGGCTCCAGTGAGAGCCATGTCTTGAGCCCCAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR CCA 90 bp | CAGGGCAAAAGAGGGAAGCAATGCCCACTACAGGGAGTCCTGGTGTaGCCTGGGGCTCTCAAGAACTTAACGAGAACCAAACCCATGGTT | + |
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Preference number: 1 (lower is better) Translates to: QGKRGKQCPLQGVLV*PGALKNLTRTKPMV Trigger: AACCATGGGTTTGGTTCTCGTTAAGTTCTTGAGAGCCCCAGGCCACACCAGGACTCCCTGTAGTGGGCATTGCTTCCCTCTTTTGCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
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| 3UTR GCA 90 bp | GACTTGGCCCTCAGTAATGGCTGTGGATACCGACATCAGCCAAGATaGCAGTACCTACTGGGTTCTCCTTCCAGAGCATGTGTCCAGACA | + |
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Preference number: 1 (lower is better) Translates to: DLALSNGCGYRHQPR*QYLLGSPSRACVQT Trigger: TGTCTGGACACATGCTCTGGAAGGAGAACCCAGTAGGTACTGGCATCTTGGCTGATGTCGGTATCCACAGCCATTACTGAGGGCCAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR CCA 90 bp | ACCACCTGTACCCTCTGCCATCCTGTCCGAGACACGATGAGACTGTaGGTCCCGAAGGATCGACCTAGTTTAAAAACACCCAAGACGTTC | + |
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Preference number: 1 (lower is better) Translates to: TTCTLCHPVRDTMRL*VPKDRPSLKTPKTF Trigger: GAACGTCTTGGGTGTTTTTAAACTAGGTCGATCCTTCGGGACCCACAGTCTCATCGTGTCTCGGACAGGATGGCAGAGGGTACAGGTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
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| 3UTR CCA 90 bp | CAAAAGAGGGAAGCAATGCCCACTACAGGGAGTCCTGGTGTGGCCTaGGGCTCTCAAGAACTTAACGAGAACCAAACCCATGGTTTAGGT | + |
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Preference number: 1 (lower is better) Translates to: QKREAMPTTGSPGVA*GSQELNENQTHGLG Trigger: ACCTAAACCATGGGTTTGGTTCTCGTTAAGTTCTTGAGAGCCCCAGGCCACACCAGGACTCCCTGTAGTGGGCATTGCTTCCCTCTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
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| 3UTR CCA 90 bp | GGTGGCTGGGGGCTCAGGTTTCCTTCTCCTGTGGCTATATACAGGTaGGAGACTGTGAGTATAAGTGACAAAATGAGCCAGAAGACAGCC | + |
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Preference number: 1 (lower is better) Translates to: GGWGLRFPSPVAIYR*ETVSISDKMSQKTA Trigger: GGCTGTCTTCTGGCTCATTTTGTCACTTATACTCACAGTCTCCCACCTGTATATAGCCACAGGAGAAGGAAACCTGAGCCCCCAGCCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR TCA 90 bp | GTGGTGACACTAGGGATCCTGGTACACAGGGCACACCTTTCACTGTaGGGAAATGATGTCAGCAGCCAGTTAAGGGTACTCTGCAAGGAT | + |
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Preference number: 1 (lower is better) Translates to: VVTLGILVHRAHLSL*GNDVSSQLRVLCKD Trigger: ATCCTTGCAGAGTACCCTTAACTGGCTGCTGACATCATTTCCTCACAGTGAAAGGTGTGCCCTGTGTACCAGGATCCCTAGTGTCACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
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| 3UTR GCA 90 bp | GCAGCTGGAGGGAGGAGATCTTCCCTCAGGAGGCTGTCAGAACACTaGAAGGAGGTACAAGTCAAAATGTGTGTCGCAGTGCTTTATATG | + |
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Preference number: 1 (lower is better) Translates to: AAGGRRSSLRRLSEH*KEVQVKMCVAVLYM Trigger: CATATAAAGCACTGCGACACACATTTTGACTTGTACCTCCTTGCAGTGTTCTGACAGCCTCCTGAGGGAAGATCTCCTCCCTCCAGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR TCA 90 bp | ACTAGGGATCCTGGTACACAGGGCACACCTTTCACTGTGAGGAAATaGTGTCAGCAGCCAGTTAAGGGTACTCTGCAAGGATCAAAACTG | + |
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Preference number: 1 (lower is better) Translates to: TRDPGTQGTPFTVRK*CQQPVKGTLQGSKL Trigger: CAGTTTTGATCCTTGCAGAGTACCCTTAACTGGCTGCTGACATCATTTCCTCACAGTGAAAGGTGTGCCCTGTGTACCAGGATCCCTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
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| 3UTR TCA 90 bp | TCCTTCTCCTGTGGCTATATACAGGTGGGAGACTGTGAGTATAAGTaGCAAAATGAGCCAGAAGACAGCCACCTGCTTCTGGCTGAGTCT | + |
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Preference number: 1 (lower is better) Translates to: SFSCGYIQVGDCEYK*QNEPEDSHLLLAES Trigger: AGACTCAGCCAGAAGCAGGTGGCTGTCTTCTGGCTCATTTTGTCACTTATACTCACAGTCTCCCACCTGTATATAGCCACAGGAGAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR CCA 90 bp | CTTGTAGCACACAGAGAAGACAATCCAGGAGAGGATGAAAGGTACTaGTCTCATAGTAGTGACAAGAGGCCAAGGAAGACCAAGTTTGAC | + |
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Preference number: 1 (lower is better) Translates to: LVAHREDNPGEDERY*SHSSDKRPRKTKFD Trigger: GTCAAACTTGGTCTTCCTTGGCCTCTTGTCACTACTATGAGACCAGTACCTTTCATCCTCTCCTGGATTGTCTTCTCTGTGTGCTACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
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| 3UTR-3UTR CCA 90 bp | GCTGTGAGGGCCACGGAGGCAGGCGAGAGGGGTGTGTGTCTGGCTATAGCCCACAGACATGGCTCTCACTaGAGCCAGAGAAAGAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: AVRATEAGERGVCLAIAHRHGSH*SQRKRC Trigger: GCACCTCTTTCTCTGGCTCCAGTGAGAGCCATGTCT...GTGGGCTATAGCCAGACACACACCCCTCTCGCCTGCCTCCGTGGCCCTCACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR-3UTR TCA 90 bp | CACCTGGACACTCCCATCTGCCTCAGACCTCCCTCTTCAAGGCAGGTCCTTTCTCTGTCCGAGACACGATaGGACTGTGGGTCCCGAAGG | + |
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Preference number: 2 (lower is better) Translates to: HLDTPICLRPPSSRQVLSLSETR*DCGSRR Trigger: CCTTCGGGACCCACAGTCTCATCGTGTCTCGGACAG...AGAAAGGACCTGCCTTGAAGAGGGAGGTCTGAGGCAGATGGGAGTGTCCAGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
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| 3UTR-3UTR TCA 90 bp | AAAATGAGCCAGAAGACAGCCACCTGCTTCTGGCTGAGTCTGGACAGGGGAAGAAGCCCACAGGGGTCCTaGCCCACCAGCCACAGCACA | + |
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Preference number: 2 (lower is better) Translates to: KMSQKTATCFWLSLDRGRSPQGS*PTSHST Trigger: TGTGCTGTGGCTGGTGGGTCAGGACCCCTGTGGGCT...TCTTCCCCTGTCCAGACTCAGCCAGAAGCAGGTGGCTGTCTTCTGGCTCATTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR-3UTR CCA 90 bp | TATGTGGGCAGCAGCATTTGGTCCTGGTCTAAAGCTGCTGTGAGGGCCACGGAGCCTCGGGCCAACCCCTaGTGTTCCTCTTCTGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: YVGSSIWSWSKAAVRATEPRANP*CSSSER Trigger: CCTCTCAGAAGAGGAACACCAGGGGTTGGCCCGAGG...CTCCGTGGCCCTCACAGCAGCTTTAGACCAGGACCAAATGCTGCTGCCCACATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR CAA 90 bp | GAGAAAGAGAAGGGTAGAGTGGGCAGCCCAAGCGTGAGCTTCACATaGTGGGAGGTCCAGCTGTCAGGAGATCACCACCACCTGTACCCT | + |
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Preference number: 2 (lower is better) Translates to: EKEKGRVGSPSVSFT*WEVQLSGDHHHLYP Trigger: AGGGTACAGGTGGTGGTGATCTCCTGACAGCTGGACCTCCCACAATGTGAAGCTCACGCTTGGGCTGCCCACTCTACCCTTCTCTTTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
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| 3UTR CAA 90 bp | CGAACCTTGGTCTCCAGTGACCAGAGGGGGTTAGCTGGTGCCAGTTaGGATGGTGCAGTCAGTGTCGTCCTGGCTAGAGCTAAGAACAGG | + |
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Preference number: 2 (lower is better) Translates to: RTLVSSDQRGLAGAS*DGAVSVVLARAKNR Trigger: CCTGTTCTTAGCTCTAGCCAGGACGACACTGACTGCACCATCCAAACTGGCACCAGCTAACCCCCTCTGGTCACTGGAGACCAAGGTTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR-3UTR GCA 90 bp | GCATATGTGGGCAGCAGCATTTGGTCCTGGTCTAAAGCTGCTGTGAGGGCCACGCTGGACACTCCCATCTaGCTCAGACCTCCCTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: AYVGSSIWSWSKAAVRATLDTPI*LRPPSS Trigger: TGAAGAGGGAGGTCTGAGGCAGATGGGAGTGTCCAG...CGTGGCCCTCACAGCAGCTTTAGACCAGGACCAAATGCTGCTGCCCACATATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR-3UTR CCA 90 bp | AAGAGCCTCTGCTCCCTCCGGGCTTCTCCGCCTTCACCACCACTGCAGTTACTAGGCTTGTGCAAAGAGTaGGGATGGAGTCTCAATCCC | + |
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Preference number: 2 (lower is better) Translates to: KSLCSLRASPPSPPLQLLGLCKE*GWSLNP Trigger: GGGATTGAGACTCCATCCCCACTCTTTGCACAAGCC...TAGTAACTGCAGTGGTGGTGAAGGCGGAGAAGCCCGGAGGGAGCAGAGGCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR-3UTR CCA 90 bp | AAGAGCCTCTGCTCCCTCCGGGCTTCTCCGCCTTCACCACCACTGCAGTTACTACAACACCAGAGAGAATaGTGGGTCCATGAGGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: KSLCSLRASPPSPPLQLLQHQRE*WVHEAA Trigger: AGCTGCCTCATGGACCCACCATTCTCTCTGGTGTTG...TAGTAACTGCAGTGGTGGTGAAGGCGGAGAAGCCCGGAGGGAGCAGAGGCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR-3UTR GCA 90 bp | CCAGAAGCAGCTGGGATTCATGGAAGAGAAGGTGCAGGGAAGCAGGCTACCCCTCCTGAGCTCAGAGACTaGTTTTCCCATCTGCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: PEAAGIHGREGAGKQATPPELRD*FSHLLR Trigger: CCTGAGCAGATGGGAAAAGCAGTCTCTGAGCTCAGG...AGGGGTAGCCTGCTTCCCTGCACCTTCTCTTCCATGAATCCCAGCTGCTTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR-3UTR CCA 90 bp | AAGAGCCTCTGCTCCCTCCGGGCTTCTCCGCCTTCACCACCACTGCAGTTACTATGCAAAGAGTGGGGATaGAGTCTCAATCCCCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: KSLCSLRASPPSPPLQLLCKEWG*SLNPQV Trigger: CACTTGGGGATTGAGACTCCATCCCCACTCTTTGCA...TAGTAACTGCAGTGGTGGTGAAGGCGGAGAAGCCCGGAGGGAGCAGAGGCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR-3UTR CCA 90 bp | AAGAGCCTCTGCTCCCTCCGGGCTTCTCCGCCTTCACCACCACTGCAGTTACTAGTGTCTGTGACAGGCTaGACTTGTAGCACACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: KSLCSLRASPPSPPLQLLVSVTG*TCSTQR Trigger: TCTCTGTGTGCTACAAGTCCAGCCTGTCACAGACAC...TAGTAACTGCAGTGGTGGTGAAGGCGGAGAAGCCCGGAGGGAGCAGAGGCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR-3UTR TCA 90 bp | GCATATGTGGGCAGCAGCATTTGGTCCTGGTCTAAAGCTGCTGTGAGGGCCACGGCACACCTTTCACTGTaGGGAAATGATGTCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: AYVGSSIWSWSKAAVRATAHLSL*GNDVSS Trigger: GCTGCTGACATCATTTCCTCACAGTGAAAGGTGTGC...CGTGGCCCTCACAGCAGCTTTAGACCAGGACCAAATGCTGCTGCCCACATATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR-3UTR CCA 90 bp | TCACCCAGTGGTGACACTAGGGATCCTGGTACACAGGGCACACCTTTCACTGTGGTGAGCTTCACATTGTaGGAGGTCCAGCTGTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: SPSGDTRDPGTQGTPFTVVSFTL*EVQLSG Trigger: TCCTGACAGCTGGACCTCCCACAATGTGAAGCTCAC...CACAGTGAAAGGTGTGCCCTGTGTACCAGGATCCCTAGTGTCACCACTGGGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
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| 3UTR-3UTR CCA 90 bp | TATGTGGGCAGCAGCATTTGGTCCTGGTCTAAAGCTGCTGTGAGGGCCACGGAGTCGCAGTGCTTTATATaGCTAGCTGCTACATGGGCC | + |
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Preference number: 2 (lower is better) Translates to: YVGSSIWSWSKAAVRATESQCFI*LAATWA Trigger: GGCCCATGTAGCAGCTAGCCATATAAAGCACTGCGA...CTCCGTGGCCCTCACAGCAGCTTTAGACCAGGACCAAATGCTGCTGCCCACATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR-3UTR CCA 90 bp | AGGGCAAACCCTACAAGGTGGGACTGGAGTTCTTACTCCCTGCCCCAGTGCCCCAGTCTGGAAAAGTTTTaGAGCAACCAAAGGTGCGTC | + |
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Preference number: 2 (lower is better) Translates to: RANPTRWDWSSYSLPQCPSLEKF*SNQRCV Trigger: GACGCACCTTTGGTTGCTCCAAAACTTTTCCAGACT...GGGGCACTGGGGCAGGGAGTAAGAACTCCAGTCCCACCTTGTAGGGTTTGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR CAA 90 bp | TCCCACATCTGGGGGAGGCAACTCAGAGGCTGCTTCCTTAGCTCTTaGTTCGCATCCCTTTCCAGGAGAAATACCAAACTCTGGGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: SHIWGRQLRGCFLSS*FASLSRRNTKLWGD Trigger: GTCTCCCCAGAGTTTGGTATTTCTCCTGGAAAGGGATGCGAACAAAGAGCTAAGGAAGCAGCCTCTGAGTTGCCTCCCCCAGATGTGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
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| 3UTR CAA 90 bp | GCAGCTGACCTCTGGCCAAGAGGAGAAAGAAACTTTGGTGCTGAGTaGCCTACCAGAAGGCTGGAAAGAGAAACGTGGACAGCGCTGCTA | + |
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Preference number: 2 (lower is better) Translates to: AADLWPRGERNFGAE*PTRRLERETWTALL Trigger: TAGCAGCGCTGTCCACGTTTCTCTTTCCAGCCTTCTGGTAGGCAACTCAGCACCAAAGTTTCTTTCTCCTCTTGGCCAGAGGTCAGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR CAA 90 bp | CTGAGCTCAGAGACTGCTTTTCCCATCTGCTCAGGCACAAAGAGATaGCAGCACCCAAGGGGAGGGAGGGCAGCAGAACAGAAATGGAAT | + |
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Preference number: 2 (lower is better) Translates to: LSSETAFPICSGTKR*QHPRGGRAAEQKWN Trigger: ATTCCATTTCTGTTCTGCTGCCCTCCCTCCCCTTGGGTGCTGCAATCTCTTTGTGCCTGAGCAGATGGGAAAAGCAGTCTCTGAGCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
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| 3UTR-3UTR CCA 90 bp | TCCCCAAGTGATGGGATGACCACTCTTGGTTTCTTTCCTCAGGGACTCAGGGCAAGTCCTGGTGTGGCCTaGGGCTCTCAAGAACTTAAC | + |
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Preference number: 2 (lower is better) Translates to: SPSDGMTTLGFFPQGLRASPGVA*GSQELN Trigger: GTTAAGTTCTTGAGAGCCCCAGGCCACACCAGGACT...TGCCCTGAGTCCCTGAGGAAAGAAACCAAGAGTGGTCATCCCATCACTTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
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| 3UTR-3UTR TCA 90 bp | GGTCTCATAGTAGTGACAAGAGGCCAAGGAAGACCAAGTTTGACAGGGGGTTGGGTCTCAATCCCCAAGTaGTGGGATGACCACTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: GLIVVTRGQGRPSLTGGWVSIPK*WDDHSW Trigger: CCAAGAGTGGTCATCCCATCACTTGGGGATTGAGAC...CCAACCCCCTGTCAAACTTGGTCTTCCTTGGCCTCTTGTCACTACTATGAGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| 3UTR-3UTR TCA 90 bp | AAAATGAGCCAGAAGACAGCCACCTGCTTCTGGCTGAGTCTGGACAGGGGAAGACTGCAGAGGCTACACTaGCACCAAGAAAAGTACGGT | + |
|
Preference number: 2 (lower is better) Translates to: KMSQKTATCFWLSLDRGRLQRLH*HQEKYG Trigger: ACCGTACTTTTCTTGGTGTCAGTGTAGCCTCTGCAG...TCTTCCCCTGTCCAGACTCAGCCAGAAGCAGGTGGCTGTCTTCTGGCTCATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR-3UTR GCA 90 bp | GGCTGCTTCCTTAGCTCTTTGTTCGCATCCCTTTCCAGGAGAAATACCAAACTCACCACCTGTACCCTCTaGCATCCTGTCCGAGACACG | + |
|
Preference number: 2 (lower is better) Translates to: GCFLSSLFASLSRRNTKLTTCTL*HPVRDT Trigger: CGTGTCTCGGACAGGATGGCAGAGGGTACAGGTGGT...GAGTTTGGTATTTCTCCTGGAAAGGGATGCGAACAAAGAGCTAAGGAAGCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| 3UTR-3UTR CCA 90 bp | AAGAGCCTCTGCTCCCTCCGGGCTTCTCCGCCTTCACCACCACTGCAGTTACTAAGAAATACCAAACTCTaGGGAGACAGAATTCTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: KSLCSLRASPPSPPLQLLRNTKL*GDRILW Trigger: CCACAGAATTCTGTCTCCCCAGAGTTTGGTATTTCT...TAGTAACTGCAGTGGTGGTGAAGGCGGAGAAGCCCGGAGGGAGCAGAGGCTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR-3UTR TCA 90 bp | TGCCTCAGACCTCCCTCTTCAAGGCAGGTCCTTTCTCTGCTTATCAGACAACAGCCCCAAGTGATGGGATaGCCACTCTTGGTTTCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: CLRPPSSRQVLSLLIRQQPQVMG*PLLVSF Trigger: GAAAGAAACCAAGAGTGGTCATCCCATCACTTGGGG...CTGTTGTCTGATAAGCAGAGAAAGGACCTGCCTTGAAGAGGGAGGTCTGAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| 3UTR-3UTR TCA 90 bp | CCTGGGAGGACAGCAGTCAAACTCTTGCTCTTCCCACTCTTCAAGATACCTAAAAAGAGAGATGGCGCTTaGCAGTGTCACCCAGTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: PGRTAVKLLLFPLFKIPKKRDGA*QCHPVV Trigger: CACCACTGGGTGACACTGTCAAGCGCCATCTCTCTT...TTTAGGTATCTTGAAGAGTGGGAAGAGCAAGAGTTTGACTGCTGTCCTCCCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR-3UTR CCA 90 bp | TCACCCAGTGGTGACACTAGGGATCCTGGTACACAGGGCACACCTTTCACTGTGAGTTTGACAGGGGGTTaGCACAACAGTCCTAATAGA | + |
|
Preference number: 2 (lower is better) Translates to: SPSGDTRDPGTQGTPFTVSLTGG*HNSPNR Trigger: TCTATTAGGACTGTTGTGCCAACCCCCTGTCAAACT...CACAGTGAAAGGTGTGCCCTGTGTACCAGGATCCCTAGTGTCACCACTGGGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| 3UTR-3UTR CCA 90 bp | CACTGGAGCCAGAGAAAGAGGTGCAATCTCCAGGCCAGAAGCAGCTGGGATTCAAGTTTGACAGGGGGTTaGCACAACAGTCCTAATAGA | + |
|
Preference number: 2 (lower is better) Translates to: HWSQRKRCNLQARSSWDSSLTGG*HNSPNR Trigger: TCTATTAGGACTGTTGTGCCAACCCCCTGTCAAACT...TGAATCCCAGCTGCTTCTGGCCTGGAGATTGCACCTCTTTCTCTGGCTCCAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR-3UTR TCA 90 bp | CACCTGGACACTCCCATCTGCCTCAGACCTCCCTCTTCAAGGCAGGTCCTTTCTGTGCTAAAGCAGAACTaGGATGTGTGTAAAGAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: HLDTPICLRPPSSRQVLSVLKQN*DVCKER Trigger: TCTTTCTTTACACACATCTCAGTTCTGCTTTAGCAC...AGAAAGGACCTGCCTTGAAGAGGGAGGTCTGAGGCAGATGGGAGTGTCCAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| 3UTR-3UTR GCA 90 bp | CCTGGGAGGACAGCAGTCAAACTCTTGCTCTTCCCACTCTTCAAGATACCTAAATTCTACTGGCAAGTCTaGACCCCAGACAGAGGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: PGRTAVKLLLFPLFKIPKFYWQV*TPDRGR Trigger: TCTGCCTCTGTCTGGGGTGCAGACTTGCCAGTAGAA...TTTAGGTATCTTGAAGAGTGGGAAGAGCAAGAGTTTGACTGCTGTCCTCCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR-3UTR TCA 90 bp | CAAACTGCAGAGGCTACACTGACACCAAGAAAAGTACGGTGGGAAAGCACTATAGAGGTTCTTCATCTCTaGTCCTGTCTGAGGCCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: QTAEATLTPRKVRWESTIEVLHL*SCLRPG Trigger: TCCTGGCCTCAGACAGGATCAGAGATGAAGAACCTC...TATAGTGCTTTCCCACCGTACTTTTCTTGGTGTCAGTGTAGCCTCTGCAGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR-3UTR CCA 90 bp | TCCCCAAGTGATGGGATGACCACTCTTGGTTTCTTTCCTCAGGGACTCAGGGCAAGAAATACCAAACTCTaGGGAGACAGAATTCTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: SPSDGMTTLGFFPQGLRARNTKL*GDRILW Trigger: CCACAGAATTCTGTCTCCCCAGAGTTTGGTATTTCT...TGCCCTGAGTCCCTGAGGAAAGAAACCAAGAGTGGTCATCCCATCACTTGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| 3UTR-3UTR TCA 90 bp | AAAATGAGCCAGAAGACAGCCACCTGCTTCTGGCTGAGTCTGGACAGGGGAAGAGTGCTAAAGCAGAACTaGGATGTGTGTAAAGAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: KMSQKTATCFWLSLDRGRVLKQN*DVCKER Trigger: TCTTTCTTTACACACATCTCAGTTCTGCTTTAGCAC...TCTTCCCCTGTCCAGACTCAGCCAGAAGCAGGTGGCTGTCTTCTGGCTCATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR-3UTR CCA 90 bp | AGAAACTTTGGTGCTGAGTTGCCTACCAGAAGGCTGGAAAGAGAAACGTGGACATGGGATGACCACTCTTaGTTTCTTTCCTCAGGGACT | + |
|
Preference number: 2 (lower is better) Translates to: RNFGAELPTRRLERETWTWDDHS*FLSSGT Trigger: AGTCCCTGAGGAAAGAAACCAAGAGTGGTCATCCCA...TGTCCACGTTTCTCTTTCCAGCCTTCTGGTAGGCAACTCAGCACCAAAGTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR-3UTR TCA 90 bp | AAGACAGCCACCTGCTTCTGGCTGAGTCTGGACAGGGGAAGACAATGGAATAAGAAGGCCAGAACAAGGTaGAAAGTCTGGAAAAGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: KTATCFWLSLDRGRQWNKKARTR*KVWKSF Trigger: AAAACTTTTCCAGACTTTTCACCTTGTTCTGGCCTT...CTTATTCCATTGTCTTCCCCTGTCCAGACTCAGCCAGAAGCAGGTGGCTGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR CAA 90 bp | AGTTTAGGAAGTATAAACAAGAATGAACACAGATACCTTCTTTCCTaGTCCAGAGACCCCATCCCACAAGGCCAGAACAAGGTGAAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: SLGSINKNEHRYLLS*SRDPIPQGQNKVKS Trigger: ACTTTTCACCTTGTTCTGGCCTTGTGGGATGGGGTCTCTGGACAAGGAAAGAAGGTATCTGTGTTCATTCTTGTTTATACTTCCTAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR GCA 72 bp | GCTGTCAGGGTCAGCTGTGCTGGCCTTCCCCCACGCTaGAGGAACAAGGGACCCCTGCTTGAGGGAAAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: AVRVSCAGLPPR*RNKGPLLEGKL Trigger: GAGCTTTCCCTCAAGCAGGGGTCCCTTGTTCCTGCAGCGTGGGGGAAGGCCAGCACAGCTGACCCTGACAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR TCA 72 bp | TGGGCAGCAGCATTTGGTCCTGGTCTAAAGCTGCTGTaGGGGCCACGGAGGCAGGCGAGAGGGGTGTGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: WAAAFGPGLKLL*GPRRQARGVCV Trigger: GACACACACCCCTCTCGCCTGCCTCCGTGGCCCTCACAGCAGCTTTAGACCAGGACCAAATGCTGCTGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR GCA 72 bp | TCTGCTCCCTCCGGGCTTCTCCGCCTTCACCACCACTaGAGTTACTACTGGCAGTGCCACAAAGGAGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SAPSGLLRLHHH*SYYWQCHKGGQ Trigger: CTGGCCTCCTTTGTGGCACTGCCAGTAGTAACTGCAGTGGTGGTGAAGGCGGAGAAGCCCGGAGGGAGCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR CCA 72 bp | CATCCCTCAGGCAGCCAAAGGGCAAACCCTACAAGGTaGGACTGGAGTTCTTACTCCCTGCCCCAGTGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: HPSGSQRANPTR*DWSSYSLPQCP Trigger: GGGGCACTGGGGCAGGGAGTAAGAACTCCAGTCCCACCTTGTAGGGTTTGCCCTTTGGCTGCCTGAGGGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR CCA 72 bp | GAAGGCAGAAGCCTCAGCCTCCAGAGTCTGCTGGCCTaGAGGGCCGAAGCAGCAATCTCAGCCAATTCGGAG | + |
|
Preference number: 3 (lower is better) Translates to: EGRSLSLQSLLA*RAEAAISANSE Trigger: CTCCGAATTGGCTGAGATTGCTGCTTCGGCCCTCCAGGCCAGCAGACTCTGGAGGCTGAGGCTTCTGCCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR GCA 72 bp | CTTTCCTCAGGGACTCAGGGCAAAAGAGGGAAGCAATaGCCACTACAGGGAGTCCTGGTGTGGCCTGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LSSGTQGKRGKQ*PLQGVLVWPGA Trigger: AGCCCCAGGCCACACCAGGACTCCCTGTAGTGGGCATTGCTTCCCTCTTTTGCCCTGAGTCCCTGAGGAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| 3UTR GCA 72 bp | GAATCAGAGAAGGCAGAAGCCTCAGCCTCCAGAGTCTaGTGGCCTGGAGGGCCGAAGCAGCAATCTCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: ESEKAEASASRV*WPGGPKQQSQP Trigger: TGGCTGAGATTGCTGCTTCGGCCCTCCAGGCCAGCAGACTCTGGAGGCTGAGGCTTCTGCCTTCTCTGATTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR CCA 72 bp | GGTAGAGTGGGCAGCCCAAGCGTGAGCTTCACATTGTaGGAGGTCCAGCTGTCAGGAGATCACCACCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: GRVGSPSVSFTL*EVQLSGDHHHL Trigger: CAGGTGGTGGTGATCTCCTGACAGCTGGACCTCCCACAATGTGAAGCTCACGCTTGGGCTGCCCACTCTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| 3UTR CCA 72 bp | AACCAGCCCTTCCCAGGAGTCAGCAGCTCCCACATCTaGGGGAGGCAACTCAGAGGCTGCTTCCTTAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: NQPFPGVSSSHI*GRQLRGCFLSS Trigger: AGAGCTAAGGAAGCAGCCTCTGAGTTGCCTCCCCCAGATGTGGGAGCTGCTGACTCCTGGGAAGGGCTGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| 3UTR CCA 72 bp | GCTGAGTTGCCTACCAGAAGGCTGGAAAGAGAAACGTaGACAGCGCTGCTAAGCGGGGCCAGCTGTCAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: AELPTRRLERET*TALLSGASCQG Trigger: ACCCTGACAGCTGGCCCCGCTTAGCAGCGCTGTCCACGTTTCTCTTTCCAGCCTTCTGGTAGGCAACTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR CCA 72 bp | GGAGGCACCCAAGATCAGATGCCCCAGAGCTTCTACTaGCAAGTCTGCACCCCAGACAGAGGCAGAAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: GGTQDQMPQSFY*QVCTPDRGRRG Trigger: CCCTCTTCTGCCTCTGTCTGGGGTGCAGACTTGCCAGTAGAAGCTCTGGGGCATCTGATCTTGGGTGCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR CCA 72 bp | GAGAGGGGTGTGTGTCTGGCTATAGCCCACAGGAGGTaGCTGGGGGCTCAGGTTTCCTTCTCCTGTGGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: ERGVCLAIAHRR*LGAQVSFSCGY Trigger: ATAGCCACAGGAGAAGGAAACCTGAGCCCCCAGCCACCTCCTGTGGGCTATAGCCAGACACACACCCCTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR CCA 72 bp | AGGCAGTGTGCATATGTGGGCAGCAGCATTTGGTCCTaGTCTAAAGCTGCTGTGAGGGCCACGGAGGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: RQCAYVGSSIWS*SKAAVRATEAG Trigger: GCCTGCCTCCGTGGCCCTCACAGCAGCTTTAGACCAGGACCAAATGCTGCTGCCCACATATGCACACTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR TCA 72 bp | CCCAGAGCAGGACTAGAGCAGGAAGAGTCGGGGTCCTaGGCTCAGAGACTGCTTTTCCCATCTGCTCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: PRAGLEQEESGS*AQRLLFPSAQA Trigger: TGCCTGAGCAGATGGGAAAAGCAGTCTCTGAGCTCAGGACCCCGACTCTTCCTGCTCTAGTCCTGCTCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR GCA 72 bp | TCCAGCTGTCAGGAGATCACCACCACCTGTACCCTCTaGCATCCTGTCCGAGACACGATGAGACTGTGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: SSCQEITTTCTL*HPVRDTMRLWV Trigger: GACCCACAGTCTCATCGTGTCTCGGACAGGATGGCAGAGGGTACAGGTGGTGGTGATCTCCTGACAGCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| 3UTR GCA 72 bp | CTCCGCCTTCACCACCACTGCAGTTACTACTGGCAGTaGCACAAAGGAGGCCAGGCCCTATCCAGAGTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LRLHHHCSYYWQ*HKGGQALSRVR Trigger: TCTGACTCTGGATAGGGCCTGGCCTCCTTTGTGGCACTGCCAGTAGTAACTGCAGTGGTGGTGAAGGCGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR CCA 72 bp | GGAGGAGGCACTTGGGGCTCAAGACATGGCTCTCACTaGAGCCAGAGAAAGAGGTGCAATCTCCAGGCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: GGGTWGSRHGSH*SQRKRCNLQAR Trigger: TCTGGCCTGGAGATTGCACCTCTTTCTCTGGCTCCAGTGAGAGCCATGTCTTGAGCCCCAAGTGCCTCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR CCA 72 bp | TCAGGCAGCCAAAGGGCAAACCCTACAAGGTGGGACTaGAGTTCTTACTCCCTGCCCCAGTGCCCCATAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SGSQRANPTRWD*SSYSLPQCPIS Trigger: GCTTATGGGGCACTGGGGCAGGGAGTAAGAACTCCAGTCCCACCTTGTAGGGTTTGCCCTTTGGCTGCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR-3UTR CAA 90 bp | TCACTGGAGCCAGAGAAAGAGGTGCAATCTCCAGGCCAGAAGCAGCTGGGATTCTCAGGCACAAAGAGATaGCAGCACCCAAGGGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SLEPEKEVQSPGQKQLGFSGTKR*QHPRGG Trigger: CCCTCCCCTTGGGTGCTGCAATCTCTTTGTGCCTGA...GAATCCCAGCTGCTTCTGGCCTGGAGATTGCACCTCTTTCTCTGGCTCCAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR TCA 72 bp | AGGAGAAAGAGAAGGGTAGAGTGGGCAGCCCAAGCGTaGGCTTCACATTGTGGGAGGTCCAGCTGTCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: RRKRRVEWAAQA*ASHCGRSSCQE Trigger: CTCCTGACAGCTGGACCTCCCACAATGTGAAGCTCACGCTTGGGCTGCCCACTCTACCCTTCTCTTTCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| 3UTR CCA 72 bp | CACATCAGAGTAAGGCGAGGGCCGTACAGTCCCTCCTaGGAGGACAGCAGTCAAACTCTTGCTCTTCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: HIRVRRGPYSPS*EDSSQTLALPT Trigger: AGTGGGAAGAGCAAGAGTTTGACTGCTGTCCTCCCAGGAGGGACTGTACGGCCCTCGCCTTACTCTGATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR TCA 72 bp | TCCTCTTCTGAGAGGTTCTTCATCTCTGATCCTGTCTaGGGCCAGGACCAACCAGCCCTTCCCAGGAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SSSERFFISDPV*GQDQPALPRSQ Trigger: CTGACTCCTGGGAAGGGCTGGTTGGTCCTGGCCTCAGACAGGATCAGAGATGAAGAACCTCTCAGAAGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| 3UTR TCA 72 bp | TTCCCTCAAAGTCAGGCCTGTGCTGACCTGTGTGCATaGGCTCGGAATCAGAGAAGGCAGAAGCCTCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: FPQSQACADLCA*ARNQRRQKPQP Trigger: AGGCTGAGGCTTCTGCCTTCTCTGATTCCGAGCTCATGCACACAGGTCAGCACAGGCCTGACTTTGAGGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR CCA 72 bp | AAGGTGCGTCTAAGTAGAGGGCAACACCAGAGAGAATaGTGGGTCCATGAGGCAGCTGGAGGGAGGAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: KVRLSRGQHQRE*WVHEAAGGRRS Trigger: AGATCTCCTCCCTCCAGCTGCCTCATGGACCCACCATTCTCTCTGGTGTTGCCCTCTACTTAGACGCACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR CCA 72 bp | AGGGAGGGAAGAATGAAAACAGCAGGAGGAGGCACTTaGGGCTCAAGACATGGCTCTCACTGGAGCCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: REGRMKTAGGGT*GSRHGSHWSQR Trigger: TCTCTGGCTCCAGTGAGAGCCATGTCTTGAGCCCCAAGTGCCTCCTCCTGCTGTTTTCATTCTTCCCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR CCA 72 bp | GAACAAAGGCAGTGTGCATATGTGGGCAGCAGCATTTaGTCCTGGTCTAAAGCTGCTGTGAGGGCCACGGAG | + |
|
Preference number: 3 (lower is better) Translates to: EQRQCAYVGSSI*SWSKAAVRATE Trigger: CTCCGTGGCCCTCACAGCAGCTTTAGACCAGGACCAAATGCTGCTGCCCACATATGCACACTGCCTTTGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR-3UTR CAA 90 bp | TATGTGGGCAGCAGCATTTGGTCCTGGTCTAAAGCTGCTGTGAGGGCCACGGAGTGCTTCCTTAGCTCTTaGTTCGCATCCCTTTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: YVGSSIWSWSKAAVRATECFLSS*FASLSR Trigger: CCTGGAAAGGGATGCGAACAAAGAGCTAAGGAAGCA...CTCCGTGGCCCTCACAGCAGCTTTAGACCAGGACCAAATGCTGCTGCCCACATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR TCA 72 bp | TCCCACCTGCAGTCATGTACCCACAGGAACAGCAGCTaGCCTCTGGCCAAGAGGAGAAAGAAACTTTGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: SHLQSCTHRNSS*PLAKRRKKLWC Trigger: GCACCAAAGTTTCTTTCTCCTCTTGGCCAGAGGTCAGCTGCTGTTCCTGTGGGTACATGACTGCAGGTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR TCA 72 bp | AGACAAGGCTCCTTTCCCTCAAAGTCAGGCCTGTGCTaGCCTGTGTGCATGAGCTCGGAATCAGAGAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: RQGSFPSKSGLC*PVCMSSESEKA Trigger: TGCCTTCTCTGATTCCGAGCTCATGCACACAGGTCAGCACAGGCCTGACTTTGAGGGAAAGGAGCCTTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR TCA 72 bp | TCTGGCACTCTCCCCAATACTAGGGGCCCTAGGCAATaGATGGTAGCAGACTTGGCCCTCAGTAATGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SGTLPNTRGPRQ*MVADLALSNGC Trigger: ACAGCCATTACTGAGGGCCAAGTCTGCTACCATTCATTGCCTAGGGCCCCTAGTATTGGGGAGAGTGCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR GCA 72 bp | TCAAGACATGGCTCTCACTGGAGCCAGAGAAAGAGGTaGAATCTCCAGGCCAGAAGCAGCTGGGATTCATGG | + |
|
Preference number: 3 (lower is better) Translates to: SRHGSHWSQRKR*NLQARSSWDSW Trigger: CCATGAATCCCAGCTGCTTCTGGCCTGGAGATTGCACCTCTTTCTCTGGCTCCAGTGAGAGCCATGTCTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR CCA 72 bp | AGAGGGAAGCAATGCCCACTACAGGGAGTCCTGGTGTaGCCTGGGGCTCTCAAGAACTTAACGAGAACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: RGKQCPLQGVLV*PGALKNLTRTK Trigger: TTTGGTTCTCGTTAAGTTCTTGAGAGCCCCAGGCCACACCAGGACTCCCTGTAGTGGGCATTGCTTCCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| 3UTR TCA 72 bp | GCCAGGCCCTATCCAGAGTCAGACCTTCACCTAGTGTaGGCGTGTTTCTCCTCCAGCTGTAAACAGGGTATT | + |
|
Preference number: 3 (lower is better) Translates to: ARPYPESDLHLV*ACFSSSCKQGI Trigger: AATACCCTGTTTACAGCTGGAGGAGAAACACGCTCACACTAGGTGAAGGTCTGACTCTGGATAGGGCCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR GCA 72 bp | GGGAGGAGATCTTCCCTCAGGAGGCTGTCAGAACACTaGAAGGAGGTACAAGTCAAAATGTGTGTCGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: GRRSSLRRLSEH*KEVQVKMCVAV Trigger: CACTGCGACACACATTTTGACTTGTACCTCCTTGCAGTGTTCTGACAGCCTCCTGAGGGAAGATCTCCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR TCA 72 bp | TGTGCAAAGAGTGGGGATGGAGTCTCAATCCCCAAGTaGTGGGATGACCACTCTTGGTTTCTTTCCTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: CAKSGDGVSIPK*WDDHSWFLSSG Trigger: CCCTGAGGAAAGAAACCAAGAGTGGTCATCCCATCACTTGGGGATTGAGACTCCATCCCCACTCTTTGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| 3UTR TCA 72 bp | CTAGGGATCCTGGTACACAGGGCACACCTTTCACTGTaGGGAAATGATGTCAGCAGCCAGTTAAGGGTACTC | + |
|
Preference number: 3 (lower is better) Translates to: LGILVHRAHLSL*GNDVSSQLRVL Trigger: GAGTACCCTTAACTGGCTGCTGACATCATTTCCTCACAGTGAAAGGTGTGCCCTGTGTACCAGGATCCCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| 3UTR CCA 72 bp | TGCAGTCATGTACCCACAGGAACAGCAGCTGACCTCTaGCCAAGAGGAGAAAGAAACTTTGGTGCTGAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: CSHVPTGTAADL*PRGERNFGAEL Trigger: CAACTCAGCACCAAAGTTTCTTTCTCCTCTTGGCCAGAGGTCAGCTGCTGTTCCTGTGGGTACATGACTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR CCA 72 bp | CTAAGAACAGGGAGGAACAAAGGCAGTGTGCATATGTaGGCAGCAGCATTTGGTCCTGGTCTAAAGCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LRTGRNKGSVHM*AAAFGPGLKLL Trigger: CAGCAGCTTTAGACCAGGACCAAATGCTGCTGCCCACATATGCACACTGCCTTTGTTCCTCCCTGTTCTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR-3UTR CAA 90 bp | AAAATGAGCCAGAAGACAGCCACCTGCTTCTGGCTGAGTCTGGACAGGGGAAGAAAGTCTGGAAAAGTTTaGGAGCAACCAAAGGTGCGT | + |
|
Preference number: 3 (lower is better) Translates to: KMSQKTATCFWLSLDRGRKSGKV*EQPKVR Trigger: ACGCACCTTTGGTTGCTCCAAAACTTTTCCAGACTT...TCTTCCCCTGTCCAGACTCAGCCAGAAGCAGGTGGCTGTCTTCTGGCTCATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR GCA 72 bp | TCTGGCCAAGAGGAGAAAGAAACTTTGGTGCTGAGTTaGCTACCAGAAGGCTGGAAAGAGAAACGTGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: SGQEEKETLVLS*LPEGWKEKRGQ Trigger: CTGTCCACGTTTCTCTTTCCAGCCTTCTGGTAGGCAACTCAGCACCAAAGTTTCTTTCTCCTCTTGGCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR GCA 72 bp | AGTATAAGTGACAAAATGAGCCAGAAGACAGCCACCTaGTTCTGGCTGAGTCTGGACAGGGGAAGACAATGG | + |
|
Preference number: 3 (lower is better) Translates to: SISDKMSQKTAT*FWLSLDRGRQW Trigger: CCATTGTCTTCCCCTGTCCAGACTCAGCCAGAAGCAGGTGGCTGTCTTCTGGCTCATTTTGTCACTTATACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR CCA 72 bp | TTAGGTCTTCTTTCTAGAGTCCCTCGGGCCAACCCCTaGTGTTCCTCTTCTGAGAGGTTCTTCATCTCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: LGLLSRVPRANP*CSSSERFFISD Trigger: ATCAGAGATGAAGAACCTCTCAGAAGAGGAACACCAGGGGTTGGCCCGAGGGACTCTAGAAAGAAGACCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| 3UTR CCA 72 bp | ACTGCAGAGGCTACACTGACACCAAGAAAAGTACGGTaGGAAAGCACTATAACCCAGGCCTTGTTAGAGACG | + |
|
Preference number: 3 (lower is better) Translates to: TAEATLTPRKVR*ESTITQALLET Trigger: CGTCTCTAACAAGGCCTGGGTTATAGTGCTTTCCCACCGTACTTTTCTTGGTGTCAGTGTAGCCTCTGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR CCA 72 bp | CACAGAGAAGACAATCCAGGAGAGGATGAAAGGTACTaGTCTCATAGTAGTGACAAGAGGCCAAGGAAGACC | + |
|
Preference number: 3 (lower is better) Translates to: HREDNPGEDERY*SHSSDKRPRKT Trigger: GGTCTTCCTTGGCCTCTTGTCACTACTATGAGACCAGTACCTTTCATCCTCTCCTGGATTGTCTTCTCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| 3UTR CCA 72 bp | GGGCTCAGGTTTCCTTCTCCTGTGGCTATATACAGGTaGGAGACTGTGAGTATAAGTGACAAAATGAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GLRFPSPVAIYR*ETVSISDKMSQ Trigger: CTGGCTCATTTTGTCACTTATACTCACAGTCTCCCACCTGTATATAGCCACAGGAGAAGGAAACCTGAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR TCA 72 bp | TGTGGCTATATACAGGTGGGAGACTGTGAGTATAAGTaGCAAAATGAGCCAGAAGACAGCCACCTGCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: CGYIQVGDCEYK*QNEPEDSHLLL Trigger: CAGAAGCAGGTGGCTGTCTTCTGGCTCATTTTGTCACTTATACTCACAGTCTCCCACCTGTATATAGCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR GCA 72 bp | GTACAGTCCCTCCTGGGAGGACAGCAGTCAAACTCTTaGTCTTCCCACTCTTCAAGATACCTAAAGGTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: VQSLLGGQQSNS*SSHSSRYLKVK Trigger: TTTAACCTTTAGGTATCTTGAAGAGTGGGAAGAGCAAGAGTTTGACTGCTGTCCTCCCAGGAGGGACTGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| CDS-3UTR TCA 90 bp | GGCTGCTTCCTTAGCTCTTTGTTCGCATCCCTTTCCAGGAGAAATACCAAACTCGGCGGGGAGCCTGGCTaGGCGTGTAGCGCGTCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GCFLSSLFASLSRRNTKLGGEPG*ACSASR Trigger: CCGCGACGCGCTACACGCTCAGCCAGGCTCCCCGCC...GAGTTTGGTATTTCTCCTGGAAAGGGATGCGAACAAAGAGCTAAGGAAGCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS-3UTR TCA 90 bp | AGGATGAAAGGTACTGGTCTCATAGTAGTGACAAGAGGCCAAGGAAGACCAAGTGGCGGGGAGCCTGGCTaGGCGTGTAGCGCGTCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RMKGTGLIVVTRGQGRPSGGEPG*ACSASR Trigger: CCGCGACGCGCTACACGCTCAGCCAGGCTCCCCGCC...ACTTGGTCTTCCTTGGCCTCTTGTCACTACTATGAGACCAGTACCTTTCATCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS-3UTR TCA 90 bp | TATGTGGGCAGCAGCATTTGGTCCTGGTCTAAAGCTGCTGTGAGGGCCACGGAGCGAAGGATCGACCTTTaGGCGAGGTCTCCACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YVGSSIWSWSKAAVRATERRIDL*ARSPPG Trigger: GCCTGGTGGAGACCTCGCTCAAAGGTCGATCCTTCG...CTCCGTGGCCCTCACAGCAGCTTTAGACCAGGACCAAATGCTGCTGCCCACATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR CAA 72 bp | AAGGGTAGAGTGGGCAGCCCAAGCGTGAGCTTCACATaGTGGGAGGTCCAGCTGTCAGGAGATCACCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: KGRVGSPSVSFT*WEVQLSGDHHH Trigger: GTGGTGGTGATCTCCTGACAGCTGGACCTCCCACAATGTGAAGCTCACGCTTGGGCTGCCCACTCTACCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| CDS-3UTR GCA 90 bp | TCACCCAGTGGTGACACTAGGGATCCTGGTACACAGGGCACACCTTTCACTGTGCCTCTTTATGTAAGCTaGACCTCCCGCCGCCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPSGDTRDPGTQGTPFTVPLYVS*TSRRRS Trigger: AGAGCGGCGGCGGGAGGTGCAGCTTACATAAAGAGG...CACAGTGAAAGGTGTGCCCTGTGTACCAGGATCCCTAGTGTCACCACTGGGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS-3UTR GCA 90 bp | TACTGGTCTCATAGTAGTGACAAGAGGCCAAGGAAGACCAAGTTTGACAGGGGGAAACCACGCCGTAGCTaGCGCGCCCGATCTCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YWSHSSDKRPRKTKFDRGKPRRS*RARSPP Trigger: TGGCGGAGATCGGGCGCGGCAGCTACGGCGTGGTTT...CCCCCTGTCAAACTTGGTCTTCCTTGGCCTCTTGTCACTACTATGAGACCAGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS-3UTR CCA 90 bp | CGTGAGCTTCACATTGTGGGAGGTCCAGCTGTCAGGAGATCACCACCACCTGTATCTAGCCCCGAGATGTaGAGGAGCGGGACCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RELHIVGGPAVRRSPPPVSSPEM*RSGTLD Trigger: ATCCAAGGTCCCGCTCCTCCACATCTCGGGGCTAGA...TACAGGTGGTGGTGATCTCCTGACAGCTGGACCTCCCACAATGTGAAGCTCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| CDS-3UTR CCA 90 bp | CACTGGAGCCAGAGAAAGAGGTGCAATCTCCAGGCCAGAAGCAGCTGGGATTCATCTAGCCCCGAGATGTaGAGGAGCGGGACCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HWSQRKRCNLQARSSWDSSSPEM*RSGTLD Trigger: ATCCAAGGTCCCGCTCCTCCACATCTCGGGGCTAGA...TGAATCCCAGCTGCTTCTGGCCTGGAGATTGCACCTCTTTCTCTGGCTCCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| CDS-3UTR CCA 90 bp | AACTCAGAGGCTGCTTCCTTAGCTCTTTGTTCGCATCCCTTTCCAGGAGAAATAGCCGGATCCATGGCCTaGGCCGCCGGCCTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NSEAASLALCSHPFPGEIAGSMA*AAGLSF Trigger: GAAGCTGAGGCCGGCGGCCCAGGCCATGGATCCGGC...TATTTCTCCTGGAAAGGGATGCGAACAAAGAGCTAAGGAAGCAGCCTCTGAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS-3UTR CCA 90 bp | AGGATGAAAGGTACTGGTCTCATAGTAGTGACAAGAGGCCAAGGAAGACCAAGTGCCGGATCCATGGCCTaGGCCGCCGGCCTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RMKGTGLIVVTRGQGRPSAGSMA*AAGLSF Trigger: GAAGCTGAGGCCGGCGGCCCAGGCCATGGATCCGGC...ACTTGGTCTTCCTTGGCCTCTTGTCACTACTATGAGACCAGTACCTTTCATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS-3UTR CCA 90 bp | GCTGTCAGGAGATCACCACCACCTGTACCCTCTGCCATCCTGTCCGAGACACGACAAAGATGTCCGCCTTaGCTGTATAGTGTCCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AVRRSPPPVPSAILSETRQRCPP*LYSVPP Trigger: GGGAGGGACACTATACAGCCAAGGCGGACATCTTTG...TCGTGTCTCGGACAGGATGGCAGAGGGTACAGGTGGTGGTGATCTCCTGACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| 3UTR CAA 72 bp | GAGACTGCTTTTCCCATCTGCTCAGGCACAAAGAGATaGCAGCACCCAAGGGGAGGGAGGGCAGCAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: ETAFPICSGTKR*QHPRGGRAAEQ Trigger: CTGTTCTGCTGCCCTCCCTCCCCTTGGGTGCTGCAATCTCTTTGTGCCTGAGCAGATGGGAAAAGCAGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR CAA 72 bp | CAGGGAGGGAAGAATGAAAACAGCAGGAGGAGGCACTaGGGGCTCAAGACATGGCTCTCACTGGAGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QGGKNENSRRRH*GLKTWLSLEPE Trigger: CTCTGGCTCCAGTGAGAGCCATGTCTTGAGCCCCAAGTGCCTCCTCCTGCTGTTTTCATTCTTCCCTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| CDS-3UTR GCA 90 bp | CCAGAAGCAGCTGGGATTCATGGAAGAGAAGGTGCAGGGAAGCAGGCTACCCCTACGCACTCCTCAAACTaGACGATATTCTGGTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PEAAGIHGREGAGKQATPTHSSN*TIFWCR Trigger: GCGGCACCAGAATATCGTGCAGTTTGAGGAGTGCGT...AGGGGTAGCCTGCTTCCCTGCACCTTCTCTTCCATGAATCCCAGCTGCTTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| CDS-3UTR GCA 90 bp | TACTGGTCTCATAGTAGTGACAAGAGGCCAAGGAAGACCAAGTTTGACAGGGGGTCGGGGTGCCAGCCCTaGACAGACCTTGCTCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YWSHSSDKRPRKTKFDRGSGCQP*TDLAQS Trigger: GGACTGAGCAAGGTCTGTGCAGGGCTGGCACCCCGA...CCCCCTGTCAAACTTGGTCTTCCTTGGCCTCTTGTCACTACTATGAGACCAGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| CDS-3UTR GCA 90 bp | CGTGAGCTTCACATTGTGGGAGGTCCAGCTGTCAGGAGATCACCACCACCTGTAACGCACTCCTCAAACTaGACGATATTCTGGTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RELHIVGGPAVRRSPPPVTHSSN*TIFWCR Trigger: GCGGCACCAGAATATCGTGCAGTTTGAGGAGTGCGT...TACAGGTGGTGGTGATCTCCTGACAGCTGGACCTCCCACAATGTGAAGCTCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| CDS-3UTR GCA 90 bp | GGTCTCATAGTAGTGACAAGAGGCCAAGGAAGACCAAGTTTGACAGGGGGTTGGTGTTGCCGTGACTCATaGGCTGGGCTAACCCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLIVVTRGQGRPSLTGGWCCRDS*AGLTRC Trigger: GCAACGGGTTAGCCCAGCGCATGAGTCACGGCAACA...CCAACCCCCTGTCAAACTTGGTCTTCCTTGGCCTCTTGTCACTACTATGAGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS-3UTR GCA 90 bp | GGCAAAAAGGCTATGAGGAAAACAGGGAGTGGTCTCAGCACCACAGGGTTAGGATGTTGCCGTGACTCATaGGCTGGGCTAACCCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GKKAMRKTGSGLSTTGLGCCRDS*AGLTRC Trigger: GCAACGGGTTAGCCCAGCGCATGAGTCACGGCAACA...TCCTAACCCTGTGGTGCTGAGACCACTCCCTGTTTTCCTCATAGCCTTTTTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| CDS-3UTR CCA 90 bp | TGCCTCAGACCTCCCTCTTCAAGGCAGGTCCTTTCTCTGCTTATCAGACAACAGCCTTGGATGGTGATCTaGCCGGCGCTGTTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLRPPSSRQVLSLLIRQQPWMVI*PALFLF Trigger: GAAGAGGAACAGCGCCGGCCAGATCACCATCCAAGG...CTGTTGTCTGATAAGCAGAGAAAGGACCTGCCTTGAAGAGGGAGGTCTGAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS-3UTR TCA 90 bp | TCCTTAGCTCTTTGTTCGCATCCCTTTCCAGGAGAAATACCAAACTCTGGGGAGCTGTCCGAGACACGATaGGACTGTGGGTCCCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLALCSHPFPGEIPNSGELSETR*DCGSRR Trigger: CCTTCGGGACCCACAGTCTCATCGTGTCTCGGACAG...CTCCCCAGAGTTTGGTATTTCTCCTGGAAAGGGATGCGAACAAAGAGCTAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| CDS-3UTR GCA 90 bp | TACTGGTCTCATAGTAGTGACAAGAGGCCAAGGAAGACCAAGTTTGACAGGGGGCCTCTTTATGTAAGCTaGACCTCCCGCCGCCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YWSHSSDKRPRKTKFDRGPLYVS*TSRRRS Trigger: AGAGCGGCGGCGGGAGGTGCAGCTTACATAAAGAGG...CCCCCTGTCAAACTTGGTCTTCCTTGGCCTCTTGTCACTACTATGAGACCAGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS-3UTR CCA 90 bp | TCCCCAAGTGATGGGATGACCACTCTTGGTTTCTTTCCTCAGGGACTCAGGGCAAACTGCACGATATTCTaGTGCCGCCGCTTGAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: SPSDGMTTLGFFPQGLRANCTIF*CRRLRL Trigger: CAGTCTCAAGCGGCGGCACCAGAATATCGTGCAGTT...TGCCCTGAGTCCCTGAGGAAAGAAACCAAGAGTGGTCATCCCATCACTTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS-3UTR CCA 90 bp | CACCTGGACACTCCCATCTGCCTCAGACCTCCCTCTTCAAGGCAGGTCCTTTCTGAAGTCCTACGTTTCTaGGGGATATGCAACTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: HLDTPICLRPPSSRQVLSEVLRF*GICNSI Trigger: GATGGAGTTGCATATCCCCCAGAAACGTAGGACTTC...AGAAAGGACCTGCCTTGAAGAGGGAGGTCTGAGGCAGATGGGAGTGTCCAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| CDS-3UTR TCA 90 bp | TGCCTCAGACCTCCCTCTTCAAGGCAGGTCCTTTCTCTGCTTATCAGACAACAGGCGCAGGTAAAGCTGTaGGTTCTTGTTGCCGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: CLRPPSSRQVLSLLIRQQAQVKL*VLVAVT Trigger: AGTCACGGCAACAAGAACTCACAGCTTTACCTGCGC...CTGTTGTCTGATAAGCAGAGAAAGGACCTGCCTTGAAGAGGGAGGTCTGAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS-3UTR TCA 90 bp | AAGACAGCCACCTGCTTCTGGCTGAGTCTGGACAGGGGAAGACAATGGAATAAGGCGCAGGTAAAGCTGTaGGTTCTTGTTGCCGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: KTATCFWLSLDRGRQWNKAQVKL*VLVAVT Trigger: AGTCACGGCAACAAGAACTCACAGCTTTACCTGCGC...CTTATTCCATTGTCTTCCCCTGTCCAGACTCAGCCAGAAGCAGGTGGCTGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| CDS-3UTR GCA 90 bp | ACGATGAGACTGTGGGTCCCGAAGGATCGACCTAGTTTAAAAACACCCAAGACGGCTCAGTCCAAAGTCTaGCACCTTGAGGATGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TMRLWVPKDRPSLKTPKTAQSKV*HLEDGG Trigger: ACCCCCATCCTCAAGGTGGCAGACTTTGGACTGAGC...CGTCTTGGGTGTTTTTAAACTAGGTCGATCCTTCGGGACCCACAGTCTCATCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| CDS-3UTR GCA 90 bp | TACTGGTCTCATAGTAGTGACAAGAGGCCAAGGAAGACCAAGTTTGACAGGGGGGCCCTGCACAGACCTTaGTCAGTCCAAAGTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YWSHSSDKRPRKTKFDRGALHRP*SVQSLP Trigger: TGGCAGACTTTGGACTGAGCAAGGTCTGTGCAGGGC...CCCCCTGTCAAACTTGGTCTTCCTTGGCCTCTTGTCACTACTATGAGACCAGTA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| CDS-3UTR GCA 90 bp | AGAAACTTTGGTGCTGAGTTGCCTACCAGAAGGCTGGAAAGAGAAACGTGGACAACCACCTGTACCCTCTaGCATCCTGTCCGAGACACG | + |
|
Preference number: 4 (lower is better) Translates to: RNFGAELPTRRLERETWTTTCTL*HPVRDT Trigger: CGTGTCTCGGACAGGATGGCAGAGGGTACAGGTGGT...TGTCCACGTTTCTCTTTCCAGCCTTCTGGTAGGCAACTCAGCACCAAAGTTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| CDS-3UTR CCA 90 bp | GGCTGCTTCCTTAGCTCTTTGTTCGCATCCCTTTCCAGGAGAAATACCAAACTCCCTTGGATGGTGATCTaGCCGGCGCTGTTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GCFLSSLFASLSRRNTKLPWMVI*PALFLF Trigger: GAAGAGGAACAGCGCCGGCCAGATCACCATCCAAGG...GAGTTTGGTATTTCTCCTGGAAAGGGATGCGAACAAAGAGCTAAGGAAGCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS-3UTR CCA 90 bp | AACTCAGAGGCTGCTTCCTTAGCTCTTTGTTCGCATCCCTTTCCAGGAGAAATACAGTACCCGCTGGACTaGGCTTCGCCTTTTCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NSEAASLALCSHPFPGEIQYPLD*ASPFPL Trigger: GAGCGGAAAAGGCGAAGCCCAGTCCAGCGGGTACTG...TATTTCTCCTGGAAAGGGATGCGAACAAAGAGCTAAGGAAGCAGCCTCTGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS-3UTR CCA 90 bp | GGTCTCATAGTAGTGACAAGAGGCCAAGGAAGACCAAGTTTGACAGGGGGTTGGAACTGCACGATATTCTaGTGCCGCCGCTTGAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: GLIVVTRGQGRPSLTGGWNCTIF*CRRLRL Trigger: CAGTCTCAAGCGGCGGCACCAGAATATCGTGCAGTT...CCAACCCCCTGTCAAACTTGGTCTTCCTTGGCCTCTTGTCACTACTATGAGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS-3UTR TCA 90 bp | ACAATCCAGGAGAGGATGAAAGGTACTGGTCTCATAGTAGTGACAAGAGGCCAAGGATCCTTTCTCCTTTaGGCGAGGTCTCCACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TIQERMKGTGLIVVTRGQGSFLL*ARSPPG Trigger: GCCTGGTGGAGACCTCGCTCAAAGGAGAAAGGATCC...TTGGCCTCTTGTCACTACTATGAGACCAGTACCTTTCATCCTCTCCTGGATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| CDS-3UTR GCA 90 bp | TGTCCAGAGTGTAGCCTTCTGCTCTTCAGAAGTCTTGATGGTTTAATGTTTAGAAAACCACGCCGTAGCTaGCGCGCCCGATCTCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CPECSLLLFRSLDGLMFRKPRRS*RARSPP Trigger: TGGCGGAGATCGGGCGCGGCAGCTACGGCGTGGTTT...TCTAAACATTAAACCATCAAGACTTCTGAAGAGCAGAAGGCTACACTCTGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS-3UTR GCA 90 bp | TCCTTAGCTCTTTGTTCGCATCCCTTTCCAGGAGAAATACCAAACTCTGGGGAGTGCACGATATTCTGGTaGCGCCGCTTGAGACTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLALCSHPFPGEIPNSGECTIFW*RRLRLV Trigger: CACCAGTCTCAAGCGGCGGCACCAGAATATCGTGCA...CTCCCCAGAGTTTGGTATTTCTCCTGGAAAGGGATGCGAACAAAGAGCTAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS-3UTR GCA 90 bp | TCTTTGTTCGCATCCCTTTCCAGGAGAAATACCAAACTCTGGGGAGACAGAATTGCTGGGCTAACCCGTTaGGCTGTAGGACGCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLFASLSRRNTKLWGDRIAGLTR*AVGRTP Trigger: AGGAGTGCGTCCTACAGCGCAACGGGTTAGCCCAGC...AATTCTGTCTCCCCAGAGTTTGGTATTTCTCCTGGAAAGGGATGCGAACAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS-3UTR GCA 90 bp | GAGAAGACAATCCAGGAGAGGATGAAAGGTACTGGTCTCATAGTAGTGACAAGAGCTGGGCTAACCCGTTaGGCTGTAGGACGCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EKTIQERMKGTGLIVVTRAGLTR*AVGRTP Trigger: AGGAGTGCGTCCTACAGCGCAACGGGTTAGCCCAGC...TCTTGTCACTACTATGAGACCAGTACCTTTCATCCTCTCCTGGATTGTCTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS-3UTR GCA 90 bp | GAGAAGACAATCCAGGAGAGGATGAAAGGTACTGGTCTCATAGTAGTGACAAGACTTGATTGCCCTCTTTaGCTCGGGGTGCCAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EKTIQERMKGTGLIVVTRLDCPL*LGVPAL Trigger: CAGGGCTGGCACCCCGAGGCAAAGAGGGCAATCAAG...TCTTGTCACTACTATGAGACCAGTACCTTTCATCCTCTCCTGGATTGTCTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| CDS-3UTR GCA 90 bp | TCACCCAGTGGTGACACTAGGGATCCTGGTACACAGGGCACACCTTTCACTGTGCGTTTCTGGGGGATATaGAACTCCATCTTTGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPSGDTRDPGTQGTPFTVRFWGI*NSIFGF Trigger: AAACCCAAAGATGGAGTTGCATATCCCCCAGAAACG...CACAGTGAAAGGTGTGCCCTGTGTACCAGGATCCCTAGTGTCACCACTGGGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| 3UTR CAA 72 bp | TGGGGGAGGCAACTCAGAGGCTGCTTCCTTAGCTCTTaGTTCGCATCCCTTTCCAGGAGAAATACCAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: WGRQLRGCFLSS*FASLSRRNTKL Trigger: GAGTTTGGTATTTCTCCTGGAAAGGGATGCGAACAAAGAGCTAAGGAAGCAGCCTCTGAGTTGCCTCCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS-3UTR TCA 90 bp | GGTCTCATAGTAGTGACAAGAGGCCAAGGAAGACCAAGTTTGACAGGGGGTTGGACAGGACATACTGATTaGGGTCTCCACCTTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLIVVTRGQGRPSLTGGWTGHTD*GLHLHS Trigger: ACTGTGAAGGTGGAGACCTCAATCAGTATGTCCTGT...CCAACCCCCTGTCAAACTTGGTCTTCCTTGGCCTCTTGTCACTACTATGAGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| CDS-3UTR GCA 90 bp | GGTCTCATAGTAGTGACAAGAGGCCAAGGAAGACCAAGTTTGACAGGGGGTTGGGGCTTTAGGTCCCTGTaGACGATGTGGTTTTTATGC | + |
|
Preference number: 4 (lower is better) Translates to: GLIVVTRGQGRPSLTGGWGFRSL*TMWFLC Trigger: GCATAAAAACCACATCGTGCACAGGGACCTAAAGCC...CCAACCCCCTGTCAAACTTGGTCTTCCTTGGCCTCTTGTCACTACTATGAGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| CDS-3UTR CCA 90 bp | GGTCTCATAGTAGTGACAAGAGGCCAAGGAAGACCAAGTTTGACAGGGGGTTGGTCCCTGTGCACGATGTaGTTTTTATGCAGGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLIVVTRGQGRPSLTGGWSLCTM*FLCRKA Trigger: TGCCTTCCTGCATAAAAACCACATCGTGCACAGGGA...CCAACCCCCTGTCAAACTTGGTCTTCCTTGGCCTCTTGTCACTACTATGAGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| CDS-3UTR TCA 90 bp | TGTCCAGAGTGTAGCCTTCTGCTCTTCAGAAGTCTTGATGGTTTAATGTTTAGACAAAGTCTGCCACCTTaGGGATGGGGGTGCCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: CPECSLLLFRSLDGLMFRQSLPP*GWGCQT Trigger: GGTCTGGCACCCCCATCCTCAAGGTGGCAGACTTTG...TCTAAACATTAAACCATCAAGACTTCTGAAGAGCAGAAGGCTACACTCTGGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| CDS-3UTR CCA 90 bp | GAGAAGACAATCCAGGAGAGGATGAAAGGTACTGGTCTCATAGTAGTGACAAGAACTTTTGTTGGTGGCTaGGTCAGGTCTCCGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: EKTIQERMKGTGLIVVTRTFVGG*VRSPGQ Trigger: CTGTCCCGGAGACCTGACCCAGCCACCAACAAAAGT...TCTTGTCACTACTATGAGACCAGTACCTTTCATCCTCTCCTGGATTGTCTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| CDS-3UTR CCA 90 bp | GGCTGCTTCCTTAGCTCTTTGTTCGCATCCCTTTCCAGGAGAAATACCAAACTCGCAGCACATGTGACCTaGTCCATTCGGGTTTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GCFLSSLFASLSRRNTKLAAHVT*SIRVSS Trigger: ACTTGAAACCCGAATGGACCAGGTCACATGTGCTGC...GAGTTTGGTATTTCTCCTGGAAAGGGATGCGAACAAAGAGCTAAGGAAGCAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| CDS-3UTR TCA 90 bp | GAGAAGACAATCCAGGAGAGGATGAAAGGTACTGGTCTCATAGTAGTGACAAGACTTTCAAGAGCTGCTTaGCCCCCTCAGACATGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EKTIQERMKGTGLIVVTRLSRAA*PPQTWK Trigger: CTTCCATGTCTGAGGGGGTCAAGCAGCTCTTGAAAG...TCTTGTCACTACTATGAGACCAGTACCTTTCATCCTCTCCTGGATTGTCTTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| CDS-3UTR GCA 90 bp | TACTGGTCTCATAGTAGTGACAAGAGGCCAAGGAAGACCAAGTTTGACAGGGGGACGATGTGGTTTTTATaGAGGAAGGCAATGGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: YWSHSSDKRPRKTKFDRGTMWFL*RKAMAL Trigger: AAGCGCCATTGCCTTCCTGCATAAAAACCACATCGT...CCCCCTGTCAAACTTGGTCTTCCTTGGCCTCTTGTCACTACTATGAGACCAGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| CDS-3UTR TCA 90 bp | TGTCCAGAGTGTAGCCTTCTGCTCTTCAGAAGTCTTGATGGTTTAATGTTTAGATGCCAGACCGCTCTGTaGTCAGGATGTTGTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CPECSLLLFRSLDGLMFRCQTAL*SGCCLA Trigger: AGCCAGACAACATCCTGATCACAGAGCGGTCTGGCA...TCTAAACATTAAACCATCAAGACTTCTGAAGAGCAGAAGGCTACACTCTGGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| CDS-3UTR GCA 90 bp | ACAATCCAGGAGAGGATGAAAGGTACTGGTCTCATAGTAGTGACAAGAGGCCAAATGTCTTTCAAGAGCTaGTTGACCCCCTCAGACATG | + |
|
Preference number: 4 (lower is better) Translates to: TIQERMKGTGLIVVTRGQMSFKS*LTPSDM Trigger: CATGTCTGAGGGGGTCAAGCAGCTCTTGAAAGACAT...TTGGCCTCTTGTCACTACTATGAGACCAGTACCTTTCATCCTCTCCTGGATTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| 3UTR CAA 72 bp | CTCATAGTAGTGACAAGAGGCCAAGGAAGACCAAGTTaGACAGGGGGTTGGCACAACAGTCCTAATAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LIVVTRGQGRPS*TGGWHNSPNRR Trigger: TCTTCTATTAGGACTGTTGTGCCAACCCCCTGTCAAACTTGGTCTTCCTTGGCCTCTTGTCACTACTATGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS-3UTR TCA 90 bp | TCTTTGTTCGCATCCCTTTCCAGGAGAAATACCAAACTCTGGGGAGACAGAATTCTTCACAGTACTCCATaGCAAACCAGAGATAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLFASLSRRNTKLWGDRILHSTP*QTRDSR Trigger: CCTGCTATCTCTGGTTTGTCATGGAGTACTGTGAAG...AATTCTGTCTCCCCAGAGTTTGGTATTTCTCCTGGAAAGGGATGCGAACAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| CDS-3UTR TCA 90 bp | TGTCCAGAGTGTAGCCTTCTGCTCTTCAGAAGTCTTGATGGTTTAATGTTTAGACGGGACAGGACATACTaGTTGAGGTCTCCACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CPECSLLLFRSLDGLMFRRDRTY*LRSPPS Trigger: TGAAGGTGGAGACCTCAATCAGTATGTCCTGTCCCG...TCTAAACATTAAACCATCAAGACTTCTGAAGAGCAGAAGGCTACACTCTGGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| 3UTR CAA 72 bp | ACAAGGCCAGAACAAGGTGAAAAGTCTGGAAAAGTTTaGGAGCAACCAAAGGTGCGTCTAAGTAGAGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TRPEQGEKSGKV*EQPKVRLSRGQ Trigger: TTGCCCTCTACTTAGACGCACCTTTGGTTGCTCCAAAACTTTTCCAGACTTTTCACCTTGTTCTGGCCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| 3UTR CAA 72 bp | AGTATAAACAAGAATGAACACAGATACCTTCTTTCCTaGTCCAGAGACCCCATCCCACAAGGCCAGAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SINKNEHRYLLS*SRDPIPQGQNK Trigger: CTTGTTCTGGCCTTGTGGGATGGGGTCTCTGGACAAGGAAAGAAGGTATCTGTGTTCATTCTTGTTTATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| CDS CCA 90 bp | GGGCCAGGAAGGCCTCGCCCGGGACCTCGGCCCCAGCCGGATCCATaGCCTGGGCCGCCGGCCTCAGCTTCTCGCACAGTACCCGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GPGRPRPGPRPQPDP*PGPPASASRTVPAG Trigger: TCCAGCGGGTACTGTGCGAGAAGCTGAGGCCGGCGGCCCAGGCCATGGATCCGGCTGGGGCCGAGGTCCCGGGCGAGGCCTTCCTGGCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS CCA 90 bp | AGGAAGGCCTCGCCCGGGACCTCGGCCCCAGCCGGATCCATGGCCTaGGCCGCCGGCCTCAGCTTCTCGCACAGTACCCGCTGGACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RKASPGTSAPAGSMA*AAGLSFSHSTRWTG Trigger: CCCAGTCCAGCGGGTACTGTGCGAGAAGCTGAGGCCGGCGGCCCAGGCCATGGATCCGGCTGGGGCCGAGGTCCCGGGCGAGGCCTTCCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS GCA 90 bp | TGGCCCCACTGCGCCCAGCCACAGCCTCATAAACCACGCCGTAGCTaGCGCGCCCGATCTCCGCCAAGAGGCTGTAGCGCGGCCGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: WPHCAQPQPHKPRRS*RARSPPRGCSAAVQ Trigger: CTGCACGGCCGCGCTACAGCCTCTTGGCGGAGATCGGGCGCGGCAGCTACGGCGTGGTTTATGAGGCTGTGGCTGGGCGCAGTGGGGCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS TCA 90 bp | GGCTTGTCTGCAGAGCCGGGTAGGGCGCGAGGCGGGGAGCCTGGCTaGGCGTGTAGCGCGTCGCGGCGCTGCTCTTGTGATGACAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: GLSAEPGRARGGEPG*ACSASRRCSCDDSN Trigger: GTTGCTGTCATCACAAGAGCAGCGCCGCGACGCGCTACACGCTCAGCCAGGCTCCCCGCCTCGCGCCCTACCCGGCTCTGCAGACAAGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS CCA 90 bp | GGCCTGGGCCGCCGGCCTCAGCTTCTCGCACAGTACCCGCTGGACTaGGCTTCGCCTTTTCCGCTCCGGGCTTTTTGTCCCTCTGCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GLGRRPQLLAQYPLD*ASPFPLRAFCPSAG Trigger: GCCCGCAGAGGGACAAAAAGCCCGGAGCGGAAAAGGCGAAGCCCAGTCCAGCGGGTACTGTGCGAGAAGCTGAGGCCGGCGGCCCAGGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS-3UTR CAA 90 bp | GCTGTGAGGGCCACGGAGGCAGGCGAGAGGGGTGTGTGTCTGGCTATAGCCCACCGAACCGGTTCCCCCTaGGAGCCCGCGCCGGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: AVRATEAGERGVCLAIAHRTGSP*EPAPED Trigger: ATCCTCCGGCGCGGGCTCCAAGGGGGAACCGGTTCG...GTGGGCTATAGCCAGACACACACCCCTCTCGCCTGCCTCCGTGGCCCTCACAGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| CDS CCA 90 bp | GCCTCATCCCTCCGTCTAGCCCCGAGATGTGGAGGAGCGGGACCTTaGATGGTGATCTGGCCGGCGCTGTTCCTCTTCCGGGCGAACCGG | + |
|
Preference number: 5 (lower is better) Translates to: ASSLRLAPRCGGAGP*MVIWPALFLFRANR Trigger: CCGGTTCGCCCGGAAGAGGAACAGCGCCGGCCAGATCACCATCCAAGGTCCCGCTCCTCCACATCTCGGGGCTAGACGGAGGGATGAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS CCA 90 bp | CGTCTAGCCCCGAGATGTGGAGGAGCGGGACCTTGGATGGTGATCTaGCCGGCGCTGTTCCTCTTCCGGGCGAACCGGTTCCCCCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RLAPRCGGAGPWMVI*PALFLFRANRFPLG Trigger: TCCAAGGGGGAACCGGTTCGCCCGGAAGAGGAACAGCGCCGGCCAGATCACCATCCAAGGTCCCGCTCCTCCACATCTCGGGGCTAGACG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS CCA 90 bp | ATGACAGCAACGCTCCCGGGGGAGGCCTCGGCTTCCAGGTTCCCGTaGCCGTCCCCGAGTTCACGCCAGCTGAGCACTTTACGTAACCTC | + |
|
Preference number: 5 (lower is better) Translates to: MTATLPGEASASRFP*PSPSSRQLSTLRNL Trigger: GAGGTTACGTAAAGTGCTCAGCTGGCGTGAACTCGGGGACGGCCACGGGAACCTGGAAGCCGAGGCCTCCCCCGGGAGCGTTGCTGTCAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS GCA 90 bp | GCCTCGGGGTGCCAGCCCTGCACAGACCTTGCTCAGTCCAAAGTCTaGCACCTTGAGGATGGGGGTGCCAGACCGCTCTGTGATCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ASGCQPCTDLAQSKV*HLEDGGARPLCDQD Trigger: ATCCTGATCACAGAGCGGTCTGGCACCCCCATCCTCAAGGTGGCAGACTTTGGACTGAGCAAGGTCTGTGCAGGGCTGGCACCCCGAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| CDS TCA 90 bp | CCTCGGCTTCCAGGTTCCCGTGGCCGTCCCCGAGTTCACGCCAGCTaGGCACTTTACGTAACCTCTTTATGTAAGCTGCACCTCCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PRLPGSRGRPRVHAS*ALYVTSLCKLHLPP Trigger: CGGCGGGAGGTGCAGCTTACATAAAGAGGTTACGTAAAGTGCTCAGCTGGCGTGAACTCGGGGACGGCCACGGGAACCTGGAAGCCGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS GCA 90 bp | ATGCGCTGGGCTAACCCGTTGCGCTGTAGGACGCACTCCTCAAACTaGACGATATTCTGGTGCCGCCGCTTGAGACTGGTGAGGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: MRWANPLRCRTHSSN*TIFWCRRLRLVRAQ Trigger: CTGGGCCCTCACCAGTCTCAAGCGGCGGCACCAGAATATCGTGCAGTTTGAGGAGTGCGTCCTACAGCGCAACGGGTTAGCCCAGCGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS-3UTR CAA 90 bp | CACCTGGACACTCCCATCTGCCTCAGACCTCCCTCTTCAAGGCAGGTCCTTTCTTCCGCTCCGGGCTTTTaGTCCCTCTGCGGGCTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: HLDTPICLRPPSSRQVLSSAPGF*SLCGLR Trigger: ACGGAGCCCGCAGAGGGACAAAAAGCCCGGAGCGGA...AGAAAGGACCTGCCTTGAAGAGGGAGGTCTGAGGCAGATGGGAGTGTCCAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS-3UTR CAA 90 bp | CACCTGGACACTCCCATCTGCCTCAGACCTCCCTCTTCAAGGCAGGTCCTTTCTTCGCAGCGGATCTTCTaGACTGCCACCCTGGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HLDTPICLRPPSSRQVLSSQRIF*TATLAP Trigger: TGGGGCCAGGGTGGCAGTCAAGAAGATCCGCTGCGA...AGAAAGGACCTGCCTTGAAGAGGGAGGTCTGAGGCAGATGGGAGTGTCCAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS-3UTR CAA 90 bp | TCACCCAGTGGTGACACTAGGGATCCTGGTACACAGGGCACACCTTTCACTGTGCGCTGGGCTAACCCGTaGCGCTGTAGGACGCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: SPSGDTRDPGTQGTPFTVRWANP*RCRTHS Trigger: GGAGTGCGTCCTACAGCGCAACGGGTTAGCCCAGCG...CACAGTGAAAGGTGTGCCCTGTGTACCAGGATCCCTAGTGTCACCACTGGGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS GCA 90 bp | CCGTTGCGCTGTAGGACGCACTCCTCAAACTGCACGATATTCTGGTaGCGCCGCTTGAGACTGGTGAGGGCCCAGAATTCTGCTAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PLRCRTHSSNCTIFW*RRLRLVRAQNSASA Trigger: GGCACTAGCAGAATTCTGGGCCCTCACCAGTCTCAAGCGGCGGCACCAGAATATCGTGCAGTTTGAGGAGTGCGTCCTACAGCGCAACGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS-3UTR CAA 90 bp | ACGATGAGACTGTGGGTCCCGAAGGATCGACCTAGTTTAAAAACACCCAAGACGCGAACCGGTTCCCCCTaGGAGCCCGCGCCGGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TMRLWVPKDRPSLKTPKTRTGSP*EPAPED Trigger: ATCCTCCGGCGCGGGCTCCAAGGGGGAACCGGTTCG...CGTCTTGGGTGTTTTTAAACTAGGTCGATCCTTCGGGACCCACAGTCTCATCGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| CDS-3UTR CAA 90 bp | AAAATGAGCCAGAAGACAGCCACCTGCTTCTGGCTGAGTCTGGACAGGGGAAGACGCTGGGCTAACCCGTaGCGCTGTAGGACGCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: KMSQKTATCFWLSLDRGRRWANP*RCRTHS Trigger: GGAGTGCGTCCTACAGCGCAACGGGTTAGCCCAGCG...TCTTCCCCTGTCCAGACTCAGCCAGAAGCAGGTGGCTGTCTTCTGGCTCATTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| CDS-3UTR CAA 90 bp | GCATATGTGGGCAGCAGCATTTGGTCCTGGTCTAAAGCTGCTGTGAGGGCCACGCCGAAGGATCGACCTTaGAGCGAGGTCTCCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AYVGSSIWSWSKAAVRATPKDRP*SEVSTR Trigger: CCTGGTGGAGACCTCGCTCAAAGGTCGATCCTTCGG...CGTGGCCCTCACAGCAGCTTTAGACCAGGACCAAATGCTGCTGCCCACATATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166282.3 |
||
| CDS GCA 90 bp | CCACCAGGCGCAGGTAAAGCTGTGAGTTCTTGTTGCCGTGACTCATaGGCTGGGCTAACCCGTTGCGCTGTAGGACGCACTCCTCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: PPGAGKAVSSCCRDS*AGLTRCAVGRTPQT Trigger: AGTTTGAGGAGTGCGTCCTACAGCGCAACGGGTTAGCCCAGCGCATGAGTCACGGCAACAAGAACTCACAGCTTTACCTGCGCCTGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS-3UTR CAA 90 bp | CGTGAGCTTCACATTGTGGGAGGTCCAGCTGTCAGGAGATCACCACCACCTGTACCAAAGTCTGCCACCTaGAGGATGGGGGTGCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RELHIVGGPAVRRSPPPVPKSAT*RMGVPD Trigger: GTCTGGCACCCCCATCCTCAAGGTGGCAGACTTTGG...TACAGGTGGTGGTGATCTCCTGACAGCTGGACCTCCCACAATGTGAAGCTCACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
||
| CDS GCA 90 bp | GCTGTGAGTTCTTGTTGCCGTGACTCATGCGCTGGGCTAACCCGTTaGGCTGTAGGACGCACTCCTCAAACTGCACGATATTCTGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: AVSSCCRDSCAGLTR*AVGRTPQTARYSGA Trigger: GGCACCAGAATATCGTGCAGTTTGAGGAGTGCGTCCTACAGCGCAACGGGTTAGCCCAGCGCATGAGTCACGGCAACAAGAACTCACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS CCA 90 bp | AACCCGTTGCGCTGTAGGACGCACTCCTCAAACTGCACGATATTCTaGTGCCGCCGCTTGAGACTGGTGAGGGCCCAGAATTCTGCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: NPLRCRTHSSNCTIF*CRRLRLVRAQNSAS Trigger: ACTAGCAGAATTCTGGGCCCTCACCAGTCTCAAGCGGCGGCACCAGAATATCGTGCAGTTTGAGGAGTGCGTCCTACAGCGCAACGGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
||
| CDS-3UTR CAA 90 bp | ACAATCCAGGAGAGGATGAAAGGTACTGGTCTCATAGTAGTGACAAGAGGCCAATCCGCTCCGGGCTTTTaGTCCCTCTGCGGGCTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: TIQERMKGTGLIVVTRGQSAPGF*SLCGLR Trigger: ACGGAGCCCGCAGAGGGACAAAAAGCCCGGAGCGGA...TTGGCCTCTTGTCACTACTATGAGACCAGTACCTTTCATCCTCTCCTGGATTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
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| CDS-3UTR CAA 90 bp | CACCTGGACACTCCCATCTGCCTCAGACCTCCCTCTTCAAGGCAGGTCCTTTCTAGCATGAAACTTTTGTaGGTGGCTGGGTCAGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: HLDTPICLRPPSSRQVLSSMKLL*VAGSGL Trigger: GAGACCTGACCCAGCCACCAACAAAAGTTTCATGCT...AGAAAGGACCTGCCTTGAAGAGGGAGGTCTGAGGCAGATGGGAGTGTCCAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
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| CDS GCA 90 bp | ATTTTTGTTATCTTGATTGCCCTCTTTGCCTCGGGGTGCCAGCCCTaGACAGACCTTGCTCAGTCCAAAGTCTGCCACCTTGAGGATGGG | + |
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Preference number: 5 (lower is better) Translates to: IFVILIALFASGCQP*TDLAQSKVCHLEDG Trigger: CCCATCCTCAAGGTGGCAGACTTTGGACTGAGCAAGGTCTGTGCAGGGCTGGCACCCCGAGGCAAAGAGGGCAATCAAGATAACAAAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
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| CDS GCA 90 bp | TCAGGTCGGTCCTGTGGGTTAGCAGCTAACATGTCTTTCAAGAGCTaGTTGACCCCCTCAGACATGGAAGTCCTACGTTTCTGGGGGATA | + |
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Preference number: 5 (lower is better) Translates to: SGRSCGLAANMSFKS*LTPSDMEVLRFWGI Trigger: TATCCCCCAGAAACGTAGGACTTCCATGTCTGAGGGGGTCAAGCAGCTCTTGAAAGACATGTTAGCTGCTAACCCACAGGACCGACCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
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| CDS-3UTR CAA 90 bp | AGGATGAAAGGTACTGGTCTCATAGTAGTGACAAGAGGCCAAGGAAGACCAAGTAGCCCTGCACAGACCTaGCTCAGTCCAAAGTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: RMKGTGLIVVTRGQGRPSSPAQT*LSPKSA Trigger: GGCAGACTTTGGACTGAGCAAGGTCTGTGCAGGGCT...ACTTGGTCTTCCTTGGCCTCTTGTCACTACTATGAGACCAGTACCTTTCATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
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| CDS-3UTR CAA 90 bp | TCCCCAAGTGATGGGATGACCACTCTTGGTTTCTTTCCTCAGGGACTCAGGGCACCCAGGAGCTCCTTCTaGGTTTCAGAGTCAATAAAG | + |
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Preference number: 5 (lower is better) Translates to: SPSDGMTTLGFFPQGLRAPRSSF*VSESIK Trigger: CTTTATTGACTCTGAAACCAAGAAGGAGCTCCTGGG...TGCCCTGAGTCCCTGAGGAAAGAAACCAAGAGTGGTCATCCCATCACTTGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
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| CDS-3UTR CAA 90 bp | GGTCTCATAGTAGTGACAAGAGGCCAAGGAAGACCAAGTTTGACAGGGGGTTGGTCTTTCAAGAGCTGCTaGACCCCCTCAGACATGGAA | + |
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Preference number: 5 (lower is better) Translates to: GLIVVTRGQGRPSLTGGWSFKSC*TPSDME Trigger: TTCCATGTCTGAGGGGGTCAAGCAGCTCTTGAAAGA...CCAACCCCCTGTCAAACTTGGTCTTCCTTGGCCTCTTGTCACTACTATGAGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
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| CDS-3UTR CAA 90 bp | TCTTTGTTCGCATCCCTTTCCAGGAGAAATACCAAACTCTGGGGAGACAGAATTAGGATCCTTTCTCCTTaGAGCGAGGTCTCCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLFASLSRRNTKLWGDRIRILSP*SEVSTR Trigger: CCTGGTGGAGACCTCGCTCAAAGGAGAAAGGATCCT...AATTCTGTCTCCCCAGAGTTTGGTATTTCTCCTGGAAAGGGATGCGAACAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
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| CDS-3UTR CAA 90 bp | ACGATGAGACTGTGGGTCCCGAAGGATCGACCTAGTTTAAAAACACCCAAGACGTGTAGCATGAAACTTTaGTTGGTGGCTGGGTCAGGT | + |
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Preference number: 5 (lower is better) Translates to: TMRLWVPKDRPSLKTPKTCSMKL*LVAGSG Trigger: ACCTGACCCAGCCACCAACAAAAGTTTCATGCTACA...CGTCTTGGGTGTTTTTAAACTAGGTCGATCCTTCGGGACCCACAGTCTCATCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
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| CDS-3UTR CAA 90 bp | ACAATCCAGGAGAGGATGAAAGGTACTGGTCTCATAGTAGTGACAAGAGGCCAAGACGATCTCAGTCCCTaGCTTAATGTAGGTCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TIQERMKGTGLIVVTRGQDDLSP*LNVGPQ Trigger: CTGGGGACCTACATTAAGCAAGGGACTGAGATCGTC...TTGGCCTCTTGTCACTACTATGAGACCAGTACCTTTCATCCTCTCCTGGATTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
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| CDS-3UTR CAA 90 bp | TACTGGTCTCATAGTAGTGACAAGAGGCCAAGGAAGACCAAGTTTGACAGGGGGTATGCAACTCCATCTTaGGGTTTTCTAGCAGCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: YWSHSSDKRPRKTKFDRGYATPS*GFLAAP Trigger: AGGCGCTGCTAGAAAACCCAAAGATGGAGTTGCATA...CCCCCTGTCAAACTTGGTCTTCCTTGGCCTCTTGTCACTACTATGAGACCAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
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| CDS-3UTR CAA 90 bp | AACTCAGAGGCTGCTTCCTTAGCTCTTTGTTCGCATCCCTTTCCAGGAGAAATATCTGTGATCAGGATGTaGTCTGGCTTTAGGTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: NSEAASLALCSHPFPGEISVIRM*SGFRSL Trigger: CAGGGACCTAAAGCCAGACAACATCCTGATCACAGA...TATTTCTCCTGGAAAGGGATGCGAACAAAGAGCTAAGGAAGCAGCCTCTGAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
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| CDS-3UTR CAA 90 bp | AGGATGAAAGGTACTGGTCTCATAGTAGTGACAAGAGGCCAAGGAAGACCAAGTCACATTTTTGTTATCTaGATTGCCCTCTTTGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RMKGTGLIVVTRGQGRPSHIFVI*IALFAS Trigger: CGAGGCAAAGAGGGCAATCAAGATAACAAAAATGTG...ACTTGGTCTTCCTTGGCCTCTTGTCACTACTATGAGACCAGTACCTTTCATCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
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| CDS CCA 72 bp | AGGCCTCGCCCGGGACCTCGGCCCCAGCCGGATCCATaGCCTGGGCCGCCGGCCTCAGCTTCTCGCACAGTA | + |
|
Preference number: 6 (lower is better) Translates to: RPRPGPRPQPDP*PGPPASASRTV Trigger: TACTGTGCGAGAAGCTGAGGCCGGCGGCCCAGGCCATGGATCCGGCTGGGGCCGAGGTCCCGGGCGAGGCCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
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| CDS TCA 72 bp | GCAGAGCCGGGTAGGGCGCGAGGCGGGGAGCCTGGCTaGGCGTGTAGCGCGTCGCGGCGCTGCTCTTGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: AEPGRARGGEPG*ACSASRRCSCD Trigger: ATCACAAGAGCAGCGCCGCGACGCGCTACACGCTCAGCCAGGCTCCCCGCCTCGCGCCCTACCCGGCTCTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
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| CDS GCA 72 bp | TGCGCCCAGCCACAGCCTCATAAACCACGCCGTAGCTaGCGCGCCCGATCTCCGCCAAGAGGCTGTAGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: CAQPQPHKPRRS*RARSPPRGCSA Trigger: CGCGCTACAGCCTCTTGGCGGAGATCGGGCGCGGCAGCTACGGCGTGGTTTATGAGGCTGTGGCTGGGCGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
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| CDS CCA 72 bp | ACGCTCCCGGGGGAGGCCTCGGCTTCCAGGTTCCCGTaGCCGTCCCCGAGTTCACGCCAGCTGAGCACTTTA | + |
|
Preference number: 6 (lower is better) Translates to: TLPGEASASRFP*PSPSSRQLSTL Trigger: TAAAGTGCTCAGCTGGCGTGAACTCGGGGACGGCCACGGGAACCTGGAAGCCGAGGCCTCCCCCGGGAGCGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
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| CDS CCA 72 bp | CCCCCTTGCCTCATCCCTCCGTCTAGCCCCGAGATGTaGAGGAGCGGGACCTTGGATGGTGATCTGGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: PPCLIPPSSPEM*RSGTLDGDLAG Trigger: GCCGGCCAGATCACCATCCAAGGTCCCGCTCCTCCACATCTCGGGGCTAGACGGAGGGATGAGGCAAGGGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
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| CDS CAA 90 bp | TGCCTCATCCCTCCGTCTAGCCCCGAGATGTGGAGGAGCGGGACCTaGGATGGTGATCTGGCCGGCGCTGTTCCTCTTCCGGGCGAACCG | + |
|
Preference number: 6 (lower is better) Translates to: CLIPPSSPEMWRSGT*DGDLAGAVPLPGEP Trigger: CGGTTCGCCCGGAAGAGGAACAGCGCCGGCCAGATCACCATCCAAGGTCCCGCTCCTCCACATCTCGGGGCTAGACGGAGGGATGAGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
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| CDS CCA 72 bp | CCGAGATGTGGAGGAGCGGGACCTTGGATGGTGATCTaGCCGGCGCTGTTCCTCTTCCGGGCGAACCGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: PRCGGAGPWMVI*PALFLFRANRF Trigger: GAACCGGTTCGCCCGGAAGAGGAACAGCGCCGGCCAGATCACCATCCAAGGTCCCGCTCCTCCACATCTCGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
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| CDS CCA 72 bp | CGCCGGCCTCAGCTTCTCGCACAGTACCCGCTGGACTaGGCTTCGCCTTTTCCGCTCCGGGCTTTTTGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RRPQLLAQYPLD*ASPFPLRAFCP Trigger: GGGACAAAAAGCCCGGAGCGGAAAAGGCGAAGCCCAGTCCAGCGGGTACTGTGCGAGAAGCTGAGGCCGGCG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
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| CDS CCA 72 bp | TGGGCCGCCGGCCTCAGCTTCTCGCACAGTACCCGCTaGACTGGGCTTCGCCTTTTCCGCTCCGGGCTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: WAAGLSFSHSTR*TGLRLFRSGLF Trigger: AAAAAGCCCGGAGCGGAAAAGGCGAAGCCCAGTCCAGCGGGTACTGTGCGAGAAGCTGAGGCCGGCGGCCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
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| CDS GCA 72 bp | TGCCAGCCCTGCACAGACCTTGCTCAGTCCAAAGTCTaGCACCTTGAGGATGGGGGTGCCAGACCGCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: CQPCTDLAQSKV*HLEDGGARPLC Trigger: ACAGAGCGGTCTGGCACCCCCATCCTCAAGGTGGCAGACTTTGGACTGAGCAAGGTCTGTGCAGGGCTGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
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| CDS CAA 90 bp | GGTGCCAGCCCTGCACAGACCTTGCTCAGTCCAAAGTCTGCCACCTaGAGGATGGGGGTGCCAGACCGCTCTGTGATCAGGATGTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GASPAQTLLSPKSAT*RMGVPDRSVIRMLS Trigger: AGACAACATCCTGATCACAGAGCGGTCTGGCACCCCCATCCTCAAGGTGGCAGACTTTGGACTGAGCAAGGTCTGTGCAGGGCTGGCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
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| CDS GCA 72 bp | GCTAACCCGTTGCGCTGTAGGACGCACTCCTCAAACTaGACGATATTCTGGTGCCGCCGCTTGAGACTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ANPLRCRTHSSN*TIFWCRRLRLV Trigger: CACCAGTCTCAAGCGGCGGCACCAGAATATCGTGCAGTTTGAGGAGTGCGTCCTACAGCGCAACGGGTTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
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| CDS CCA 72 bp | CGCTGTAGGACGCACTCCTCAAACTGCACGATATTCTaGTGCCGCCGCTTGAGACTGGTGAGGGCCCAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: RCRTHSSNCTIF*CRRLRLVRAQN Trigger: ATTCTGGGCCCTCACCAGTCTCAAGCGGCGGCACCAGAATATCGTGCAGTTTGAGGAGTGCGTCCTACAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
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| CDS CAA 90 bp | TGTAGGACGCACTCCTCAAACTGCACGATATTCTGGTGCCGCCGCTaGAGACTGGTGAGGGCCCAGAATTCTGCTAGTGCCAACTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: CRTHSSNCTIFWCRR*RLVRAQNSASANST Trigger: CGTGGAGTTGGCACTAGCAGAATTCTGGGCCCTCACCAGTCTCAAGCGGCGGCACCAGAATATCGTGCAGTTTGAGGAGTGCGTCCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
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| CDS TCA 72 bp | CCAGGTTCCCGTGGCCGTCCCCGAGTTCACGCCAGCTaGGCACTTTACGTAACCTCTTTATGTAAGCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PGSRGRPRVHAS*ALYVTSLCKLH Trigger: GTGCAGCTTACATAAAGAGGTTACGTAAAGTGCTCAGCTGGCGTGAACTCGGGGACGGCCACGGGAACCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
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| CDS GCA 72 bp | GCAGGTAAAGCTGTGAGTTCTTGTTGCCGTGACTCATaGGCTGGGCTAACCCGTTGCGCTGTAGGACGCACT | + |
|
Preference number: 6 (lower is better) Translates to: AGKAVSSCCRDS*AGLTRCAVGRT Trigger: AGTGCGTCCTACAGCGCAACGGGTTAGCCCAGCGCATGAGTCACGGCAACAAGAACTCACAGCTTTACCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
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| CDS GCA 72 bp | ATCTTGATTGCCCTCTTTGCCTCGGGGTGCCAGCCCTaGACAGACCTTGCTCAGTCCAAAGTCTGCCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: ILIALFASGCQP*TDLAQSKVCHL Trigger: AAGGTGGCAGACTTTGGACTGAGCAAGGTCTGTGCAGGGCTGGCACCCCGAGGCAAAGAGGGCAATCAAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
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| CDS CAA 72 bp | CACTCCTCAAACTGCACGATATTCTGGTGCCGCCGCTaGAGACTGGTGAGGGCCCAGAATTCTGCTAGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: HSSNCTIFWCRR*RLVRAQNSASA Trigger: GGCACTAGCAGAATTCTGGGCCCTCACCAGTCTCAAGCGGCGGCACCAGAATATCGTGCAGTTTGAGGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
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| CDS GCA 72 bp | TGTAGGACGCACTCCTCAAACTGCACGATATTCTGGTaGCGCCGCTTGAGACTGGTGAGGGCCCAGAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: CRTHSSNCTIFW*RRLRLVRAQNS Trigger: AGAATTCTGGGCCCTCACCAGTCTCAAGCGGCGGCACCAGAATATCGTGCAGTTTGAGGAGTGCGTCCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
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| CDS GCA 72 bp | TCTTGTTGCCGTGACTCATGCGCTGGGCTAACCCGTTaGGCTGTAGGACGCACTCCTCAAACTGCACGATAT | + |
|
Preference number: 6 (lower is better) Translates to: SCCRDSCAGLTR*AVGRTPQTARY Trigger: ATATCGTGCAGTTTGAGGAGTGCGTCCTACAGCGCAACGGGTTAGCCCAGCGCATGAGTCACGGCAACAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165413.9 ENSMUST00000166282.3 |
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| CDS TCA 72 bp | TTGGTGGCTGGGTCAGGTCTCCGGGACAGGACATACTaGTTGAGGTCTCCACCTTCACAGTACTCCATGACA | + |
|
Preference number: 6 (lower is better) Translates to: LVAGSGLRDRTY*LRSPPSQYSMT Trigger: TGTCATGGAGTACTGTGAAGGTGGAGACCTCAATCAGTATGTCCTGTCCCGGAGACCTGACCCAGCCACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
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| CDS CAA 90 bp | GGTCGGTCCTGTGGGTTAGCAGCTAACATGTCTTTCAAGAGCTGCTaGACCCCCTCAGACATGGAAGTCCTACGTTTCTGGGGGATATGC | + |
|
Preference number: 6 (lower is better) Translates to: GRSCGLAANMSFKSC*TPSDMEVLRFWGIC Trigger: GCATATCCCCCAGAAACGTAGGACTTCCATGTCTGAGGGGGTCAAGCAGCTCTTGAAAGACATGTTAGCTGCTAACCCACAGGACCGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
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| CDS CAA 72 bp | AAGGCAATGGCGCTTGTAAGCTGTAGCATGAAACTTTaGTTGGTGGCTGGGTCAGGTCTCCGGGACAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: KAMALVSCSMKL*LVAGSGLRDRT Trigger: TGTCCTGTCCCGGAGACCTGACCCAGCCACCAACAAAAGTTTCATGCTACAGCTTACAAGCGCCATTGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
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| CDS CAA 90 bp | CAGACATGGAAGTCCTACGTTTCTGGGGGATATGCAACTCCATCTTaGGGTTTTCTAGCAGCGCCTCACCAACAGGGACGATCTCAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: QTWKSYVSGGYATPS*GFLAAPHQQGRSQS Trigger: GGACTGAGATCGTCCCTGTTGGTGAGGCGCTGCTAGAAAACCCAAAGATGGAGTTGCATATCCCCCAGAAACGTAGGACTTCCATGTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
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| CDS GCA 72 bp | CCCTCAGACATGGAAGTCCTACGTTTCTGGGGGATATaGAACTCCATCTTTGGGTTTTCTAGCAGCGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PSDMEVLRFWGI*NSIFGFSSSAS Trigger: TGAGGCGCTGCTAGAAAACCCAAAGATGGAGTTGCATATCCCCCAGAAACGTAGGACTTCCATGTCTGAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
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| CDS CAA 72 bp | AAGTCCTACGTTTCTGGGGGATATGCAACTCCATCTTaGGGTTTTCTAGCAGCGCCTCACCAACAGGGACGA | + |
|
Preference number: 6 (lower is better) Translates to: KSYVSGGYATPS*GFLAAPHQQGR Trigger: TCGTCCCTGTTGGTGAGGCGCTGCTAGAAAACCCAAAGATGGAGTTGCATATCCCCCAGAAACGTAGGACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
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| CDS GCA 72 bp | TCCTGTGGGTTAGCAGCTAACATGTCTTTCAAGAGCTaGTTGACCCCCTCAGACATGGAAGTCCTACGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SCGLAANMSFKS*LTPSDMEVLRF Trigger: GAAACGTAGGACTTCCATGTCTGAGGGGGTCAAGCAGCTCTTGAAAGACATGTTAGCTGCTAACCCACAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
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| CDS CAA 72 bp | TGTGGGTTAGCAGCTAACATGTCTTTCAAGAGCTGCTaGACCCCCTCAGACATGGAAGTCCTACGTTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CGLAANMSFKSC*TPSDMEVLRFW Trigger: CCAGAAACGTAGGACTTCCATGTCTGAGGGGGTCAAGCAGCTCTTGAAAGACATGTTAGCTGCTAACCCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165413.9 |
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