Pregenerated sensors for STK33 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031027Ensembl transcript IDs: ENSMUST00000090414.11, ENSMUST00000106745.9, ENSMUST00000121378.2, ENSMUST00000121748.8, ENSMUST00000141210.2
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTAACAATCGTGGAACAACGCCTTGAGCTGGTGAGGGCAGCAGCCTaGCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCAGGC | + |
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Preference number: 1 (lower is better) Translates to: LTIVEQRLELVRAAA*PKHTHGCPLVPCAG Trigger: GCCTGCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAGCTCAAGGCGTTGTTCCACGATTGTTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| 3UTR-3UTR TCA 90 bp | GGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCAGGAAGGGGCAGGGCTCATaGGAGCCGGTGGCTGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: GSSLPQAYPWLSFSALRRKGQGS*EPVAES Trigger: GCTTTCAGCCACCGGCTCTCATGAGCCCTGCCCCTT...CCTGCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| 3UTR-3UTR GCA 90 bp | GAACAACGCCTTGAGCTGGTGAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCAGCTCGGTGCTGGGCTaGTTCCTCCTGTCCCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: EQRLELVRAAACPKHTHGSSVLG*FLLSPP Trigger: GGGAGGGGACAGGAGGAAGCAGCCCAGCACCGAGCT...GCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAGCTCAAGGCGTTGTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCTGGCTGAAAGCTCGGTaGTGGGCTGCTTCCTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: EGSSLPQAYPWLSFSALRWLKAR*WAASSC Trigger: ACAGGAGGAAGCAGCCCAGCACCGAGCTTTCAGCCA...GCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCAGGTGGCTGAAAGCTCGGTaGTGGGCTGCTTCCTCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: GSSLPQAYPWLSFSALRRWLKAR*WAASSC Trigger: ACAGGAGGAAGCAGCCCAGCACCGAGCTTTCAGCCA...CCTGCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| 3UTR-3UTR CCA 90 bp | GAACAACGCCTTGAGCTGGTGAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCCTGAAAGCTCGGTGCTaGGCTGCTTCCTCCTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: EQRLELVRAAACPKHTHGLKARC*AASSCP Trigger: GGGACAGGAGGAAGCAGCCCAGCACCGAGCTTTCAG...GCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAGCTCAAGGCGTTGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| 3UTR-3UTR CCA 90 bp | GGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCAGGCCCTCCCTTCGGTGCTaGAAGAGTGGTCTGTTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: GSSLPQAYPWLSFSALRRPSLRC*KSGLFL Trigger: CAAGAACAGACCACTCTTCCAGCACCGAAGGGAGGG...CCTGCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| 3UTR-3UTR CCA 90 bp | GAACAACGCCTTGAGCTGGTGAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCCCCTCCCTTCGGTGCTaGAAGAGTGGTCTGTTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: EQRLELVRAAACPKHTHGPSLRC*KSGLFL Trigger: CAAGAACAGACCACTCTTCCAGCACCGAAGGGAGGG...GCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAGCTCAAGGCGTTGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| 3UTR-3UTR TCA 90 bp | GAACAACGCCTTGAGCTGGTGAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCAGAGTGGTCTGTTCTTaGACTGCTCAGCACTGGACA | + |
|
Preference number: 2 (lower is better) Translates to: EQRLELVRAAACPKHTHGRVVCS*TAQHWT Trigger: TGTCCAGTGCTGAGCAGTTCAAGAACAGACCACTCT...GCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAGCTCAAGGCGTTGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| 3UTR-3UTR GCA 90 bp | GAACAACGCCTTGAGCTGGTGAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCGGTCTGTTCTTGAACTaGTCAGCACTGGACAGAACC | + |
|
Preference number: 2 (lower is better) Translates to: EQRLELVRAAACPKHTHGGLFLN*SALDRT Trigger: GGTTCTGTCCAGTGCTGAGCAGTTCAAGAACAGACC...GCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAGCTCAAGGCGTTGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| 3UTR-3UTR GCA 90 bp | CAAAGTCTCCCAGTGCAGAGTGCACATAATTATTTAGAACCCCCATCACTGCATAGCTCGGTGCTGGGCTaGTTCCTCCTGTCCCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: QSLPVQSAHNYLEPPSLHSSVLG*FLLSPP Trigger: GGGAGGGGACAGGAGGAAGCAGCCCAGCACCGAGCT...ATGCAGTGATGGGGGTTCTAAATAATTATGTGCACTCTGCACTGGGAGACTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| 3UTR-3UTR TCA 90 bp | CAAAGTCTCCCAGTGCAGAGTGCACATAATTATTTAGAACCCCCATCACTGCATAAGGGGCAGGGCTCATaGGAGCCGGTGGCTGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: QSLPVQSAHNYLEPPSLHKGQGS*EPVAES Trigger: GCTTTCAGCCACCGGCTCTCATGAGCCCTGCCCCTT...ATGCAGTGATGGGGGTTCTAAATAATTATGTGCACTCTGCACTGGGAGACTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| 3UTR-3UTR TCA 90 bp | CCTAAATATAAGGATTTGAGTAGAACTAAGCGAGCATGGCCCCAGCACTTATCCCGTGGAACAACGCCTTaGGCTGGTGAGGGCAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: PKYKDLSRTKRAWPQHLSRGTTP*AGEGSS Trigger: GCTGCTGCCCTCACCAGCTCAAGGCGTTGTTCCACG...GGATAAGTGCTGGGGCCATGCTCGCTTAGTTCTACTCAAATCCTTATATTTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| 3UTR-3UTR GCA 90 bp | CCTAAATATAAGGATTTGAGTAGAACTAAGCGAGCATGGCCCCAGCACTTATCCTGGCTGAAAGCTCGGTaGTGGGCTGCTTCCTCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: PKYKDLSRTKRAWPQHLSWLKAR*WAASSC Trigger: ACAGGAGGAAGCAGCCCAGCACCGAGCTTTCAGCCA...GGATAAGTGCTGGGGCCATGCTCGCTTAGTTCTACTCAAATCCTTATATTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGGCCATTTTATTAGTAATCCTCTAACAAAGTCTCCCAGTGCAGAGTGCACATGGCTGAAAGCTCGGTaGTGGGCTGCTTCCTCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: CGHFISNPLTKSPSAECTWLKAR*WAASSC Trigger: ACAGGAGGAAGCAGCCCAGCACCGAGCTTTCAGCCA...TGTGCACTCTGCACTGGGAGACTTTGTTAGAGGATTACTAATAAAATGGCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| 3UTR-3UTR GCA 90 bp | CAAAGTCTCCCAGTGCAGAGTGCACATAATTATTTAGAACCCCCATCACTGCATCTGCGCAGGCTGTGCTaGTTGGAGGTAACTAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: QSLPVQSAHNYLEPPSLHLRRLC*LEVTSF Trigger: GAAGCTAGTTACCTCCAAGCAGCACAGCCTGCGCAG...ATGCAGTGATGGGGGTTCTAAATAATTATGTGCACTCTGCACTGGGAGACTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| 3UTR-3UTR CCA 90 bp | CCTAAATATAAGGATTTGAGTAGAACTAAGCGAGCATGGCCCCAGCACTTATCCCCCTCCCTTCGGTGCTaGAAGAGTGGTCTGTTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: PKYKDLSRTKRAWPQHLSPSLRC*KSGLFL Trigger: CAAGAACAGACCACTCTTCCAGCACCGAAGGGAGGG...GGATAAGTGCTGGGGCCATGCTCGCTTAGTTCTACTCAAATCCTTATATTTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| 3UTR-3UTR CCA 90 bp | CAAAGTCTCCCAGTGCAGAGTGCACATAATTATTTAGAACCCCCATCACTGCATCCCTCCCTTCGGTGCTaGAAGAGTGGTCTGTTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: QSLPVQSAHNYLEPPSLHPSLRC*KSGLFL Trigger: CAAGAACAGACCACTCTTCCAGCACCGAAGGGAGGG...ATGCAGTGATGGGGGTTCTAAATAATTATGTGCACTCTGCACTGGGAGACTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGGCCATTTTATTAGTAATCCTCTAACAAAGTCTCCCAGTGCAGAGTGCACACTGCGCAGGCTGTGCTaGTTGGAGGTAACTAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: CGHFISNPLTKSPSAECTLRRLC*LEVTSF Trigger: GAAGCTAGTTACCTCCAAGCAGCACAGCCTGCGCAG...TGTGCACTCTGCACTGGGAGACTTTGTTAGAGGATTACTAATAAAATGGCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| 3UTR-3UTR TCA 90 bp | CAAAGTCTCCCAGTGCAGAGTGCACATAATTATTTAGAACCCCCATCACTGCATAGAGTGGTCTGTTCTTaGACTGCTCAGCACTGGACA | + |
|
Preference number: 2 (lower is better) Translates to: QSLPVQSAHNYLEPPSLHRVVCS*TAQHWT Trigger: TGTCCAGTGCTGAGCAGTTCAAGAACAGACCACTCT...ATGCAGTGATGGGGGTTCTAAATAATTATGTGCACTCTGCACTGGGAGACTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTGCCACAATGCCTGTGGCCATTTTATTAGTAATCCTCTAACAAAGTCTCCCGGTCTGTTCTTGAACTaGTCAGCACTGGACAGAACC | + |
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Preference number: 2 (lower is better) Translates to: FCHNACGHFISNPLTKSPGLFLN*SALDRT Trigger: GGTTCTGTCCAGTGCTGAGCAGTTCAAGAACAGACC...GGGAGACTTTGTTAGAGGATTACTAATAAAATGGCCACAGGCATTGTGGCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGGCCATTTTATTAGTAATCCTCTAACAAAGTCTCCCAGTGCAGAGTGCACAGGTCTGTTCTTGAACTaGTCAGCACTGGACAGAACC | + |
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Preference number: 2 (lower is better) Translates to: CGHFISNPLTKSPSAECTGLFLN*SALDRT Trigger: GGTTCTGTCCAGTGCTGAGCAGTTCAAGAACAGACC...TGTGCACTCTGCACTGGGAGACTTTGTTAGAGGATTACTAATAAAATGGCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| 3UTR GCA 72 bp | GGCAGGGCTCATGAGAGCCGGTGGCTGAAAGCTCGGTaGTGGGCTGCTTCCTCCTGTCCCCTCCCTTCGGTG | + |
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Preference number: 3 (lower is better) Translates to: GRAHESRWLKAR*WAASSCPLPSV Trigger: CACCGAAGGGAGGGGACAGGAGGAAGCAGCCCAGCACCGAGCTTTCAGCCACCGGCTCTCATGAGCCCTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| 3UTR CCA 72 bp | AGGGCTCATGAGAGCCGGTGGCTGAAAGCTCGGTGCTaGGCTGCTTCCTCCTGTCCCCTCCCTTCGGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: RAHESRWLKARC*AASSCPLPSVL Trigger: CAGCACCGAAGGGAGGGGACAGGAGGAAGCAGCCCAGCACCGAGCTTTCAGCCACCGGCTCTCATGAGCCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| 3UTR CCA 72 bp | GCTGGGCTGCTTCCTCCTGTCCCCTCCCTTCGGTGCTaGAAGAGTGGTCTGTTCTTGAACTGCTCAGCACTG | + |
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Preference number: 3 (lower is better) Translates to: AGLLPPVPSLRC*KSGLFLNCSAL Trigger: CAGTGCTGAGCAGTTCAAGAACAGACCACTCTTCCAGCACCGAAGGGAGGGGACAGGAGGAAGCAGCCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| 3UTR-3UTR CAA 90 bp | GAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCAAGAGTGGTCTGTTCTaGAACTGCTCAGCACTGGAC | + |
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Preference number: 3 (lower is better) Translates to: EGSSLPQAYPWLSFSALRKSGLF*NCSALD Trigger: GTCCAGTGCTGAGCAGTTCAAGAACAGACCACTCTT...GCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| 3UTR-3UTR CAA 90 bp | GAACAACGCCTTGAGCTGGTGAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCAAGAGTGGTCTGTTCTaGAACTGCTCAGCACTGGAC | + |
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Preference number: 3 (lower is better) Translates to: EQRLELVRAAACPKHTHGKSGLF*NCSALD Trigger: GTCCAGTGCTGAGCAGTTCAAGAACAGACCACTCTT...GCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAGCTCAAGGCGTTGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| 3UTR-3UTR CAA 90 bp | TGTGGCCATTTTATTAGTAATCCTCTAACAAAGTCTCCCAGTGCAGAGTGCACAAAGAGTGGTCTGTTCTaGAACTGCTCAGCACTGGAC | + |
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Preference number: 3 (lower is better) Translates to: CGHFISNPLTKSPSAECTKSGLF*NCSALD Trigger: GTCCAGTGCTGAGCAGTTCAAGAACAGACCACTCTT...TGTGCACTCTGCACTGGGAGACTTTGTTAGAGGATTACTAATAAAATGGCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| 3UTR-3UTR CAA 90 bp | TGTGGCCATTTTATTAGTAATCCTCTAACAAAGTCTCCCAGTGCAGAGTGCACACCTAAATATAAGGATTaGAGTAGAACTAAGCGAGCA | + |
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Preference number: 3 (lower is better) Translates to: CGHFISNPLTKSPSAECTPKYKD*SRTKRA Trigger: TGCTCGCTTAGTTCTACTCAAATCCTTATATTTAGG...TGTGCACTCTGCACTGGGAGACTTTGTTAGAGGATTACTAATAAAATGGCCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS-3UTR GCA 90 bp | GAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCGCCAGCCTGAGAGGATaGACAGTGAGGGCATGCTGT | + |
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Preference number: 4 (lower is better) Translates to: EGSSLPQAYPWLSFSALRASLRG*TVRACC Trigger: ACAGCATGCCCTCACTGTGCATCCTCTCAGGCTGGC...GCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
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| CDS-3UTR GCA 90 bp | GAACAACGCCTTGAGCTGGTGAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCGCCAGCCTGAGAGGATaGACAGTGAGGGCATGCTGT | + |
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Preference number: 4 (lower is better) Translates to: EQRLELVRAAACPKHTHGASLRG*TVRACC Trigger: ACAGCATGCCCTCACTGTGCATCCTCTCAGGCTGGC...GCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAGCTCAAGGCGTTGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
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| CDS-3UTR GCA 90 bp | CTGGTGAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCGCCAGCCTGAGAGGATaGACAGTGAGGGCATGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LVRAAACPKHTHGCPLVPASLRG*TVRACC Trigger: ACAGCATGCCCTCACTGTGCATCCTCTCAGGCTGGC...GGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
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| CDS-3UTR CCA 90 bp | GGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCAGGTTCCACCACCAGGACTaGAGACTTGCCTGCTGGACA | + |
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Preference number: 4 (lower is better) Translates to: GSSLPQAYPWLSFSALRRFHHQD*RLACWT Trigger: TGTCCAGCAGGCAAGTCTCCAGTCCTGGTGGTGGAA...CCTGCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
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| CDS-3UTR GCA 90 bp | CTGGTGAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCAGCAGGCTTCTTGGCTaGATTGGTGGGCTGCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: LVRAAACPKHTHGCPLVPSRLLG*IGGLLC Trigger: GCAAAGCAGCCCACCAATGCAGCCAAGAAGCCTGCT...GGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS-3UTR GCA 90 bp | GAACAACGCCTTGAGCTGGTGAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCAGCAGGCTTCTTGGCTaGATTGGTGGGCTGCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: EQRLELVRAAACPKHTHGSRLLG*IGGLLC Trigger: GCAAAGCAGCCCACCAATGCAGCCAAGAAGCCTGCT...GCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAGCTCAAGGCGTTGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS-3UTR CCA 90 bp | GAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCTCATGCCTTCACTCCTaGAGCCATGCTTCTGCACAG | + |
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Preference number: 4 (lower is better) Translates to: EGSSLPQAYPWLSFSALRSCLHS*SHASAQ Trigger: CTGTGCAGAAGCATGGCTCCAGGAGTGAAGGCATGA...GCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
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| CDS-3UTR GCA 90 bp | GAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCGCTGCATTGGTGGGCTaGTTTGCTGTGTTTGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: EGSSLPQAYPWLSFSALRAALVG*FAVFAD Trigger: ATCTGCAAACACAGCAAAGCAGCCCACCAATGCAGC...GCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS-3UTR CCA 90 bp | GAACAACGCCTTGAGCTGGTGAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTCATGCCTTCACTCCTaGAGCCATGCTTCTGCACAG | + |
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Preference number: 4 (lower is better) Translates to: EQRLELVRAAACPKHTHGSCLHS*SHASAQ Trigger: CTGTGCAGAAGCATGGCTCCAGGAGTGAAGGCATGA...GCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAGCTCAAGGCGTTGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
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| CDS-3UTR CCA 90 bp | GAACAACGCCTTGAGCTGGTGAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCGCTTCTTGGCTGCATTaGTGGGCTGCTTTGCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: EQRLELVRAAACPKHTHGASWLH*WAALLC Trigger: ACACAGCAAAGCAGCCCACCAATGCAGCCAAGAAGC...GCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAGCTCAAGGCGTTGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS-3UTR CCA 90 bp | CTGGTGAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCGCTTCTTGGCTGCATTaGTGGGCTGCTTTGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVRAAACPKHTHGCPLVPASWLH*WAALLC Trigger: ACACAGCAAAGCAGCCCACCAATGCAGCCAAGAAGC...GGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR GCA 90 bp | GAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCCTGGAGCCATGCTTCTaGACAGACAAGCCAAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: EGSSLPQAYPWLSFSALRLEPCF*TDKPKS Trigger: TGATTTTGGCTTGTCTGTGCAGAAGCATGGCTCCAG...GCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
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| CDS-3UTR GCA 90 bp | GAACAACGCCTTGAGCTGGTGAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCGTCCCACATGTAGTCTaGATCATGCCTTCACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EQRLELVRAAACPKHTHGVPHVV*IMPSLL Trigger: CAGGAGTGAAGGCATGATGCAGACTACATGTGGGAC...GCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAGCTCAAGGCGTTGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR GCA 90 bp | GAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCCTGCTTTGCTGTGTTTaGAGATGGACTGTAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: EGSSLPQAYPWLSFSALRLLCCV*RWTVDS Trigger: GCTGTCTACAGTCCATCTGCAAACACAGCAAAGCAG...GCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS-3UTR GCA 90 bp | GAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCATTGGTGGGCTGCTTTaGTGTGTTTGCAGATGGACT | + |
|
Preference number: 4 (lower is better) Translates to: EGSSLPQAYPWLSFSALRIGGLL*CVCRWT Trigger: AGTCCATCTGCAAACACAGCAAAGCAGCCCACCAAT...GCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR GCA 90 bp | GAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCCAGCAGACAGGAGTTTaGTGGACGATGAGTTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EGSSLPQAYPWLSFSALRQQTGV*WTMSLK Trigger: CTTCAAACTCATCGTCCAGCAAACTCCTGTCTGCTG...GCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS-3UTR GCA 90 bp | GGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCAGGCAGCAGACAGGAGTTTaGTGGACGATGAGTTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSSLPQAYPWLSFSALRRQQTGV*WTMSLK Trigger: CTTCAAACTCATCGTCCAGCAAACTCCTGTCTGCTG...CCTGCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR TCA 90 bp | CTGGTGAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCAATACTCGATGTCTGTaGCATTTCCACCACCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LVRAAACPKHTHGCPLVPNTRCL*HFHHQD Trigger: GTCCTGGTGGTGGAAATGTCACAGACATCGAGTATT...GGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
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| CDS-3UTR TCA 90 bp | GGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCAGGGCTGATGCAAGACTTTaGATTATCAGCCTTGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GSSLPQAYPWLSFSALRRADARL*IISLVS Trigger: CGAGACAAGGCTGATAATTCAAAGTCTTGCATCAGC...CCTGCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCAGGATTGGTTGGTCTTGCTaGAGAAAGGGTATTGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSSLPQAYPWLSFSALRRIGWSC*RKGIAC Trigger: ACAGGCAATACCCTTTCTTCAGCAAGACCAACCAAT...CCTGCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR GCA 90 bp | GAACAACGCCTTGAGCTGGTGAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCCTGGAGCCATGCTTCTaGACAGACAAGCCAAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: EQRLELVRAAACPKHTHGLEPCF*TDKPKS Trigger: TGATTTTGGCTTGTCTGTGCAGAAGCATGGCTCCAG...GCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAGCTCAAGGCGTTGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR GCA 90 bp | CTGGTGAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCCTGCTTTGCTGTGTTTaGAGATGGACTGTAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVRAAACPKHTHGCPLVPLLCCV*RWTVDS Trigger: GCTGTCTACAGTCCATCTGCAAACACAGCAAAGCAG...GGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR GCA 90 bp | GAACAACGCCTTGAGCTGGTGAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCATTGGTGGGCTGCTTTaGTGTGTTTGCAGATGGACT | + |
|
Preference number: 4 (lower is better) Translates to: EQRLELVRAAACPKHTHGIGGLL*CVCRWT Trigger: AGTCCATCTGCAAACACAGCAAAGCAGCCCACCAAT...GCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAGCTCAAGGCGTTGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR GCA 90 bp | CTGGTGAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCCAGCAGACAGGAGTTTaGTGGACGATGAGTTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LVRAAACPKHTHGCPLVPQQTGV*WTMSLK Trigger: CTTCAAACTCATCGTCCAGCAAACTCCTGTCTGCTG...GGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS-3UTR GCA 90 bp | GAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCGCTTTTCTCTGGTTCTaGTTTGCTTTCAGCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: EGSSLPQAYPWLSFSALRAFLWF*FAFSRQ Trigger: CTGTCTGCTGAAAGCAAAGCAGAACCAGAGAAAAGC...GCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS-3UTR GCA 90 bp | GGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCAGGGCTTTTCTCTGGTTCTaGTTTGCTTTCAGCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: GSSLPQAYPWLSFSALRRAFLWF*FAFSRQ Trigger: CTGTCTGCTGAAAGCAAAGCAGAACCAGAGAAAAGC...CCTGCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS-3UTR CCA 90 bp | GAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCTCTCCTCATCTGTGTTaGTCTCCTCATCACTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGSSLPQAYPWLSFSALRSPHLC*SPHHFL Trigger: CAGAAAGTGATGAGGAGACCAACACAGATGAGGAGA...GCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS-3UTR CCA 90 bp | GGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCAGGTCTCCTCATCTGTGTTaGTCTCCTCATCACTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSSLPQAYPWLSFSALRRSPHLC*SPHHFL Trigger: CAGAAAGTGATGAGGAGACCAACACAGATGAGGAGA...CCTGCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS-3UTR CCA 90 bp | GAACAACGCCTTGAGCTGGTGAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCCTCGGAGCTTTTCTCTaGTTCTGCTTTGCTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EQRLELVRAAACPKHTHGLGAFL*FCFAFS Trigger: GCTGAAAGCAAAGCAGAACCAGAGAAAAGCTCCGAG...GCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAGCTCAAGGCGTTGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS-3UTR TCA 90 bp | GAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCACGAGATACATTTTCTaGGGCGACTCAAACACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EGSSLPQAYPWLSFSALRTRYIF*GDSNTC Trigger: ACAAGTGTTTGAGTCGCCTCAGAAAATGTATCTCGT...GCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
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| CDS-3UTR GCA 90 bp | CTGGTGAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCGCTTTTCTCTGGTTCTaGTTTGCTTTCAGCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: LVRAAACPKHTHGCPLVPAFLWF*FAFSRQ Trigger: CTGTCTGCTGAAAGCAAAGCAGAACCAGAGAAAAGC...GGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS-3UTR GCA 90 bp | GAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCTCTTTGATCCATAACTaGTTTGAGTTCTCCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EGSSLPQAYPWLSFSALRSLIHN*FEFSIL Trigger: GAGGATGGAGAACTCAAAGCAGTTATGGATCAAAGA...GCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
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| CDS-3UTR GCA 90 bp | CTGCTTCCTCCTGTCCCCTCCCTTCGGTGCTGGAAGAGTGGTCTGTTCTTGAACGTCCCACATGTAGTCTaGATCATGCCTTCACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLPPVPSLRCWKSGLFLNVPHVV*IMPSLL Trigger: CAGGAGTGAAGGCATGATGCAGACTACATGTGGGAC...GTTCAAGAACAGACCACTCTTCCAGCACCGAAGGGAGGGGACAGGAGGAAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
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| CDS-3UTR GCA 90 bp | CTGCTTCCTCCTGTCCCCTCCCTTCGGTGCTGGAAGAGTGGTCTGTTCTTGAACGCTGCATTGGTGGGCTaGTTTGCTGTGTTTGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLPPVPSLRCWKSGLFLNAALVG*FAVFAD Trigger: ATCTGCAAACACAGCAAAGCAGCCCACCAATGCAGC...GTTCAAGAACAGACCACTCTTCCAGCACCGAAGGGAGGGGACAGGAGGAAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS-3UTR TCA 90 bp | CTGCTTCCTCCTGTCCCCTCCCTTCGGTGCTGGAAGAGTGGTCTGTTCTTGAACAGGTGGATGATGTGTTaGTGGTTGACAGTCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLPPVPSLRCWKSGLFLNRWMMC*WLTVFR Trigger: CCTGAAGACTGTCAACCATCAACACATCATCCACCT...GTTCAAGAACAGACCACTCTTCCAGCACCGAAGGGAGGGGACAGGAGGAAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
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| CDS-3UTR TCA 90 bp | GAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCAAGATATGCGATGGCTaGTGCAAGACTTTGAATTAT | + |
|
Preference number: 4 (lower is better) Translates to: EGSSLPQAYPWLSFSALRKICDG*CKTLNY Trigger: ATAATTCAAAGTCTTGCATCAGCCATCGCATATCTT...GCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
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| CDS-3UTR TCA 90 bp | GGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCAGGAAGATATGCGATGGCTaGTGCAAGACTTTGAATTAT | + |
|
Preference number: 4 (lower is better) Translates to: GSSLPQAYPWLSFSALRRKICDG*CKTLNY Trigger: ATAATTCAAAGTCTTGCATCAGCCATCGCATATCTT...CCTGCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
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| CDS-3UTR CCA 90 bp | CTGGTGAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCGTCCATTCTTATGTGTaGGATTTTTCCTACTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LVRAAACPKHTHGCPLVPVHSYV*DFSYCD Trigger: GTCACAGTAGGAAAAATCCCACACATAAGAATGGAC...GGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
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| CDS-3UTR CCA 90 bp | CTGCTTCCTCCTGTCCCCTCCCTTCGGTGCTGGAAGAGTGGTCTGTTCTTGAACCTCGGAGCTTTTCTCTaGTTCTGCTTTGCTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLPPVPSLRCWKSGLFLNLGAFL*FCFAFS Trigger: GCTGAAAGCAAAGCAGAACCAGAGAAAAGCTCCGAG...GTTCAAGAACAGACCACTCTTCCAGCACCGAAGGGAGGGGACAGGAGGAAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS-3UTR TCA 90 bp | CTGCTTCCTCCTGTCCCCTCCCTTCGGTGCTGGAAGAGTGGTCTGTTCTTGAACGCTGATGCAAGACTTTaGATTATCAGCCTTGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LLPPVPSLRCWKSGLFLNADARL*IISLVS Trigger: CGAGACAAGGCTGATAATTCAAAGTCTTGCATCAGC...GTTCAAGAACAGACCACTCTTCCAGCACCGAAGGGAGGGGACAGGAGGAAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTTCCTCCTGTCCCCTCCCTTCGGTGCTGGAAGAGTGGTCTGTTCTTGAACATTGGTTGGTCTTGCTaGAGAAAGGGTATTGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLPPVPSLRCWKSGLFLNIGWSC*RKGIAC Trigger: ACAGGCAATACCCTTTCTTCAGCAAGACCAACCAAT...GTTCAAGAACAGACCACTCTTCCAGCACCGAAGGGAGGGGACAGGAGGAAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
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| CDS-3UTR GCA 90 bp | CCTAAATATAAGGATTTGAGTAGAACTAAGCGAGCATGGCCCCAGCACTTATCCCATGCCAACACTCTCTaGAGCAGGCTTCTTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PKYKDLSRTKRAWPQHLSHANTL*SRLLGC Trigger: GCAGCCAAGAAGCCTGCTGCAGAGAGTGTTGGCATG...GGATAAGTGCTGGGGCCATGCTCGCTTAGTTCTACTCAAATCCTTATATTTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS-3UTR GCA 90 bp | CAAAGTCTCCCAGTGCAGAGTGCACATAATTATTTAGAACCCCCATCACTGCATCATGCCAACACTCTCTaGAGCAGGCTTCTTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QSLPVQSAHNYLEPPSLHHANTL*SRLLGC Trigger: GCAGCCAAGAAGCCTGCTGCAGAGAGTGTTGGCATG...ATGCAGTGATGGGGGTTCTAAATAATTATGTGCACTCTGCACTGGGAGACTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS-3UTR CCA 90 bp | CTGCTTCCTCCTGTCCCCTCCCTTCGGTGCTGGAAGAGTGGTCTGTTCTTGAACTTGCCTGTCAACCATTaGTTATCTAGAAGTTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LLPPVPSLRCWKSGLFLNLPVNH*LSRSSL Trigger: TAAGGAACTTCTAGATAACCAATGGTTGACAGGCAA...GTTCAAGAACAGACCACTCTTCCAGCACCGAAGGGAGGGGACAGGAGGAAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGCCATTTTATTAGTAATCCTCTAACAAAGTCTCCCAGTGCAGAGTGCACAAGCAGGCTTCTTGGCTaGATTGGTGGGCTGCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CGHFISNPLTKSPSAECTSRLLG*IGGLLC Trigger: GCAAAGCAGCCCACCAATGCAGCCAAGAAGCCTGCT...TGTGCACTCTGCACTGGGAGACTTTGTTAGAGGATTACTAATAAAATGGCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS-3UTR GCA 90 bp | TGTGGCCATTTTATTAGTAATCCTCTAACAAAGTCTCCCAGTGCAGAGTGCACACATGCCAACACTCTCTaGAGCAGGCTTCTTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CGHFISNPLTKSPSAECTHANTL*SRLLGC Trigger: GCAGCCAAGAAGCCTGCTGCAGAGAGTGTTGGCATG...TGTGCACTCTGCACTGGGAGACTTTGTTAGAGGATTACTAATAAAATGGCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR GCA 90 bp | TTCTGCCACAATGCCTGTGGCCATTTTATTAGTAATCCTCTAACAAAGTCTCCCCATGCCAACACTCTCTaGAGCAGGCTTCTTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FCHNACGHFISNPLTKSPHANTL*SRLLGC Trigger: GCAGCCAAGAAGCCTGCTGCAGAGAGTGTTGGCATG...GGGAGACTTTGTTAGAGGATTACTAATAAAATGGCCACAGGCATTGTGGCAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGCCATTTTATTAGTAATCCTCTAACAAAGTCTCCCAGTGCAGAGTGCACATTCCACCACCAGGACTaGAGACTTGCCTGCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: CGHFISNPLTKSPSAECTFHHQD*RLACWT Trigger: TGTCCAGCAGGCAAGTCTCCAGTCCTGGTGGTGGAA...TGTGCACTCTGCACTGGGAGACTTTGTTAGAGGATTACTAATAAAATGGCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGCCACAATGCCTGTGGCCATTTTATTAGTAATCCTCTAACAAAGTCTCCCTTCCACCACCAGGACTaGAGACTTGCCTGCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: FCHNACGHFISNPLTKSPFHHQD*RLACWT Trigger: TGTCCAGCAGGCAAGTCTCCAGTCCTGGTGGTGGAA...GGGAGACTTTGTTAGAGGATTACTAATAAAATGGCCACAGGCATTGTGGCAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR CCA 90 bp | CCTAAATATAAGGATTTGAGTAGAACTAAGCGAGCATGGCCCCAGCACTTATCCGCTTCTTGGCTGCATTaGTGGGCTGCTTTGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PKYKDLSRTKRAWPQHLSASWLH*WAALLC Trigger: ACACAGCAAAGCAGCCCACCAATGCAGCCAAGAAGC...GGATAAGTGCTGGGGCCATGCTCGCTTAGTTCTACTCAAATCCTTATATTTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR GCA 90 bp | CCTAAATATAAGGATTTGAGTAGAACTAAGCGAGCATGGCCCCAGCACTTATCCGTCCCACATGTAGTCTaGATCATGCCTTCACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PKYKDLSRTKRAWPQHLSVPHVV*IMPSLL Trigger: CAGGAGTGAAGGCATGATGCAGACTACATGTGGGAC...GGATAAGTGCTGGGGCCATGCTCGCTTAGTTCTACTCAAATCCTTATATTTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR GCA 90 bp | CCTAAATATAAGGATTTGAGTAGAACTAAGCGAGCATGGCCCCAGCACTTATCCGCTGCATTGGTGGGCTaGTTTGCTGTGTTTGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PKYKDLSRTKRAWPQHLSAALVG*FAVFAD Trigger: ATCTGCAAACACAGCAAAGCAGCCCACCAATGCAGC...GGATAAGTGCTGGGGCCATGCTCGCTTAGTTCTACTCAAATCCTTATATTTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR TCA 90 bp | CCTAAATATAAGGATTTGAGTAGAACTAAGCGAGCATGGCCCCAGCACTTATCCAATACTCGATGTCTGTaGCATTTCCACCACCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PKYKDLSRTKRAWPQHLSNTRCL*HFHHQD Trigger: GTCCTGGTGGTGGAAATGTCACAGACATCGAGTATT...GGATAAGTGCTGGGGCCATGCTCGCTTAGTTCTACTCAAATCCTTATATTTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGTCTCCCAGTGCAGAGTGCACATAATTATTTAGAACCCCCATCACTGCATAATACTCGATGTCTGTaGCATTTCCACCACCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QSLPVQSAHNYLEPPSLHNTRCL*HFHHQD Trigger: GTCCTGGTGGTGGAAATGTCACAGACATCGAGTATT...ATGCAGTGATGGGGGTTCTAAATAATTATGTGCACTCTGCACTGGGAGACTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGTCTCCCAGTGCAGAGTGCACATAATTATTTAGAACCCCCATCACTGCATAGGTGGATGATGTGTTaGTGGTTGACAGTCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSLPVQSAHNYLEPPSLHRWMMC*WLTVFR Trigger: CCTGAAGACTGTCAACCATCAACACATCATCCACCT...ATGCAGTGATGGGGGTTCTAAATAATTATGTGCACTCTGCACTGGGAGACTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR GCA 90 bp | CCTAAATATAAGGATTTGAGTAGAACTAAGCGAGCATGGCCCCAGCACTTATCCCTGGAGCCATGCTTCTaGACAGACAAGCCAAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: PKYKDLSRTKRAWPQHLSLEPCF*TDKPKS Trigger: TGATTTTGGCTTGTCTGTGCAGAAGCATGGCTCCAG...GGATAAGTGCTGGGGCCATGCTCGCTTAGTTCTACTCAAATCCTTATATTTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR GCA 90 bp | CCTAAATATAAGGATTTGAGTAGAACTAAGCGAGCATGGCCCCAGCACTTATCCCTGCTTTGCTGTGTTTaGAGATGGACTGTAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: PKYKDLSRTKRAWPQHLSLLCCV*RWTVDS Trigger: GCTGTCTACAGTCCATCTGCAAACACAGCAAAGCAG...GGATAAGTGCTGGGGCCATGCTCGCTTAGTTCTACTCAAATCCTTATATTTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR GCA 90 bp | TGTGGCCATTTTATTAGTAATCCTCTAACAAAGTCTCCCAGTGCAGAGTGCACAGCTGCATTGGTGGGCTaGTTTGCTGTGTTTGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: CGHFISNPLTKSPSAECTAALVG*FAVFAD Trigger: ATCTGCAAACACAGCAAAGCAGCCCACCAATGCAGC...TGTGCACTCTGCACTGGGAGACTTTGTTAGAGGATTACTAATAAAATGGCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR CCA 90 bp | CCTAAATATAAGGATTTGAGTAGAACTAAGCGAGCATGGCCCCAGCACTTATCCCTCGGAGCTTTTCTCTaGTTCTGCTTTGCTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PKYKDLSRTKRAWPQHLSLGAFL*FCFAFS Trigger: GCTGAAAGCAAAGCAGAACCAGAGAAAAGCTCCGAG...GGATAAGTGCTGGGGCCATGCTCGCTTAGTTCTACTCAAATCCTTATATTTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR TCA 90 bp | CCTAAATATAAGGATTTGAGTAGAACTAAGCGAGCATGGCCCCAGCACTTATCCATTGGTTGGTCTTGCTaGAGAAAGGGTATTGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PKYKDLSRTKRAWPQHLSIGWSC*RKGIAC Trigger: ACAGGCAATACCCTTTCTTCAGCAAGACCAACCAAT...GGATAAGTGCTGGGGCCATGCTCGCTTAGTTCTACTCAAATCCTTATATTTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGCCATTTTATTAGTAATCCTCTAACAAAGTCTCCCAGTGCAGAGTGCACAATTGGTGGGCTGCTTTaGTGTGTTTGCAGATGGACT | + |
|
Preference number: 4 (lower is better) Translates to: CGHFISNPLTKSPSAECTIGGLL*CVCRWT Trigger: AGTCCATCTGCAAACACAGCAAAGCAGCCCACCAAT...TGTGCACTCTGCACTGGGAGACTTTGTTAGAGGATTACTAATAAAATGGCCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGTCTCCCAGTGCAGAGTGCACATAATTATTTAGAACCCCCATCACTGCATGCTTTTCTCTGGTTCTaGTTTGCTTTCAGCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: QSLPVQSAHNYLEPPSLHAFLWF*FAFSRQ Trigger: CTGTCTGCTGAAAGCAAAGCAGAACCAGAGAAAAGC...ATGCAGTGATGGGGGTTCTAAATAATTATGTGCACTCTGCACTGGGAGACTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR CCA 90 bp | CCTAAATATAAGGATTTGAGTAGAACTAAGCGAGCATGGCCCCAGCACTTATCCTCTCCTCATCTGTGTTaGTCTCCTCATCACTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PKYKDLSRTKRAWPQHLSSPHLC*SPHHFL Trigger: CAGAAAGTGATGAGGAGACCAACACAGATGAGGAGA...GGATAAGTGCTGGGGCCATGCTCGCTTAGTTCTACTCAAATCCTTATATTTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGCCATTTTATTAGTAATCCTCTAACAAAGTCTCCCAGTGCAGAGTGCACACTCGGAGCTTTTCTCTaGTTCTGCTTTGCTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CGHFISNPLTKSPSAECTLGAFL*FCFAFS Trigger: GCTGAAAGCAAAGCAGAACCAGAGAAAAGCTCCGAG...TGTGCACTCTGCACTGGGAGACTTTGTTAGAGGATTACTAATAAAATGGCCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGTCTCCCAGTGCAGAGTGCACATAATTATTTAGAACCCCCATCACTGCATACGAGATACATTTTCTaGGGCGACTCAAACACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QSLPVQSAHNYLEPPSLHTRYIF*GDSNTC Trigger: ACAAGTGTTTGAGTCGCCTCAGAAAATGTATCTCGT...ATGCAGTGATGGGGGTTCTAAATAATTATGTGCACTCTGCACTGGGAGACTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR TCA 90 bp | TTCTGCCACAATGCCTGTGGCCATTTTATTAGTAATCCTCTAACAAAGTCTCCCGCTGATGCAAGACTTTaGATTATCAGCCTTGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: FCHNACGHFISNPLTKSPADARL*IISLVS Trigger: CGAGACAAGGCTGATAATTCAAAGTCTTGCATCAGC...GGGAGACTTTGTTAGAGGATTACTAATAAAATGGCCACAGGCATTGTGGCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGCCATTTTATTAGTAATCCTCTAACAAAGTCTCCCAGTGCAGAGTGCACAACGAGATACATTTTCTaGGGCGACTCAAACACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CGHFISNPLTKSPSAECTTRYIF*GDSNTC Trigger: ACAAGTGTTTGAGTCGCCTCAGAAAATGTATCTCGT...TGTGCACTCTGCACTGGGAGACTTTGTTAGAGGATTACTAATAAAATGGCCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGTCTCCCAGTGCAGAGTGCACATAATTATTTAGAACCCCCATCACTGCATATAGAGCTTTTCTTCTaGATTTGCCAAAAAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QSLPVQSAHNYLEPPSLHIELFF*ICQKGW Trigger: CCACCCTTTTTGGCAAATTCAGAAGAAAAGCTCTAT...ATGCAGTGATGGGGGTTCTAAATAATTATGTGCACTCTGCACTGGGAGACTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR TCA 90 bp | TTCTGCCACAATGCCTGTGGCCATTTTATTAGTAATCCTCTAACAAAGTCTCCCATAGAGCTTTTCTTCTaGATTTGCCAAAAAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FCHNACGHFISNPLTKSPIELFF*ICQKGW Trigger: CCACCCTTTTTGGCAAATTCAGAAGAAAAGCTCTAT...GGGAGACTTTGTTAGAGGATTACTAATAAAATGGCCACAGGCATTGTGGCAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGCCATTTTATTAGTAATCCTCTAACAAAGTCTCCCAGTGCAGAGTGCACAATAGAGCTTTTCTTCTaGATTTGCCAAAAAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CGHFISNPLTKSPSAECTIELFF*ICQKGW Trigger: CCACCCTTTTTGGCAAATTCAGAAGAAAAGCTCTAT...TGTGCACTCTGCACTGGGAGACTTTGTTAGAGGATTACTAATAAAATGGCCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGCCATTTTATTAGTAATCCTCTAACAAAGTCTCCCAGTGCAGAGTGCACATCTTTGATCCATAACTaGTTTGAGTTCTCCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CGHFISNPLTKSPSAECTSLIHN*FEFSIL Trigger: GAGGATGGAGAACTCAAAGCAGTTATGGATCAAAGA...TGTGCACTCTGCACTGGGAGACTTTGTTAGAGGATTACTAATAAAATGGCCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGCCACAATGCCTGTGGCCATTTTATTAGTAATCCTCTAACAAAGTCTCCCGTCCATTCTTATGTGTaGGATTTTTCCTACTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FCHNACGHFISNPLTKSPVHSYV*DFSYCD Trigger: GTCACAGTAGGAAAAATCCCACACATAAGAATGGAC...GGGAGACTTTGTTAGAGGATTACTAATAAAATGGCCACAGGCATTGTGGCAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR CCA 90 bp | CCTAAATATAAGGATTTGAGTAGAACTAAGCGAGCATGGCCCCAGCACTTATCCTTGCCTGTCAACCATTaGTTATCTAGAAGTTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: PKYKDLSRTKRAWPQHLSLPVNH*LSRSSL Trigger: TAAGGAACTTCTAGATAACCAATGGTTGACAGGCAA...GGATAAGTGCTGGGGCCATGCTCGCTTAGTTCTACTCAAATCCTTATATTTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGCCACAATGCCTGTGGCCATTTTATTAGTAATCCTCTAACAAAGTCTCCCTTGCCTGTCAACCATTaGTTATCTAGAAGTTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: FCHNACGHFISNPLTKSPLPVNH*LSRSSL Trigger: TAAGGAACTTCTAGATAACCAATGGTTGACAGGCAA...GGGAGACTTTGTTAGAGGATTACTAATAAAATGGCCACAGGCATTGTGGCAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCAGGACCAGGACTGGAGACTaGCCTGCTGGACATACACAC | + |
|
Preference number: 5 (lower is better) Translates to: GSSLPQAYPWLSFSALRRTRTGD*PAGHTH Trigger: GTGTGTATGTCCAGCAGGCAAGTCTCCAGTCCTGGT...CCTGCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR CAA 90 bp | CTGGTGAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCACCAGGACTGGAGACTaGCCTGCTGGACATACACAC | + |
|
Preference number: 5 (lower is better) Translates to: LVRAAACPKHTHGCPLVPTRTGD*PAGHTH Trigger: GTGTGTATGTCCAGCAGGCAAGTCTCCAGTCCTGGT...GGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCAGGGCTGCTTTGCTGTGTTaGCAGATGGACTGTAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: GSSLPQAYPWLSFSALRRAALLC*QMDCRQ Trigger: CTGTCTACAGTCCATCTGCAAACACAGCAAAGCAGC...CCTGCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR CAA 90 bp | GAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCGCTGCTTTGCTGTGTTaGCAGATGGACTGTAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: EGSSLPQAYPWLSFSALRAALLC*QMDCRQ Trigger: CTGTCTACAGTCCATCTGCAAACACAGCAAAGCAGC...GCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR CAA 90 bp | GAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCTGCTGGACGATGAGTTaGAAGAGGTCATGCCAACAC | + |
|
Preference number: 5 (lower is better) Translates to: EGSSLPQAYPWLSFSALRCWTMS*KRSCQH Trigger: GTGTTGGCATGACCTCTTCAAACTCATCGTCCAGCA...GCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR CAA 90 bp | GGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCAGGTGCTGGACGATGAGTTaGAAGAGGTCATGCCAACAC | + |
|
Preference number: 5 (lower is better) Translates to: GSSLPQAYPWLSFSALRRCWTMS*KRSCQH Trigger: GTGTTGGCATGACCTCTTCAAACTCATCGTCCAGCA...CCTGCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR CAA 90 bp | GAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCGTCTCCTCATCTGTGTaGGTCTCCTCATCACTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: EGSSLPQAYPWLSFSALRVSSSV*VSSSLS Trigger: AGAAAGTGATGAGGAGACCAACACAGATGAGGAGAC...GCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR CAA 90 bp | CTGCTTCCTCCTGTCCCCTCCCTTCGGTGCTGGAAGAGTGGTCTGTTCTTGAACGGCTTCTTGGCTGCATaGGTGGGCTGCTTTGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLPPVPSLRCWKSGLFLNGFLAA*VGCFAV Trigger: CACAGCAAAGCAGCCCACCAATGCAGCCAAGAAGCC...GTTCAAGAACAGACCACTCTTCCAGCACCGAAGGGAGGGGACAGGAGGAAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR CAA 90 bp | GAACAACGCCTTGAGCTGGTGAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGCTGGACGATGAGTTaGAAGAGGTCATGCCAACAC | + |
|
Preference number: 5 (lower is better) Translates to: EQRLELVRAAACPKHTHGCWTMS*KRSCQH Trigger: GTGTTGGCATGACCTCTTCAAACTCATCGTCCAGCA...GCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAGCTCAAGGCGTTGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR CAA 90 bp | GAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCTTCTCTGGTTCTGCTTaGCTTTCAGCAGACAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: EGSSLPQAYPWLSFSALRFSGSA*LSADRS Trigger: ACTCCTGTCTGCTGAAAGCAAAGCAGAACCAGAGAA...GCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTGAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCGTCTCCTCATCTGTGTaGGTCTCCTCATCACTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LVRAAACPKHTHGCPLVPVSSSV*VSSSLS Trigger: AGAAAGTGATGAGGAGACCAACACAGATGAGGAGAC...GGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTGAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTTCTCTGGTTCTGCTTaGCTTTCAGCAGACAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LVRAAACPKHTHGCPLVPFSGSA*LSADRS Trigger: ACTCCTGTCTGCTGAAAGCAAAGCAGAACCAGAGAA...GGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTGAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCGCTTTTCTTCTGAATTaGCCAAAAAGGGTGGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVRAAACPKHTHGCPLVPAFLLN*PKRVAL Trigger: GAGAGCCACCCTTTTTGGCAAATTCAGAAGAAAAGC...GGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR CAA 90 bp | GAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCATACATTGGTTGGTCTaGCTGAAGAAAGGGTATTGC | + |
|
Preference number: 5 (lower is better) Translates to: EGSSLPQAYPWLSFSALRIHWLV*LKKGYC Trigger: GCAATACCCTTTCTTCAGCAAGACCAACCAATGTAT...GCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTTCCTCCTGTCCCCTCCCTTCGGTGCTGGAAGAGTGGTCTGTTCTTGAACCATTGGTGGGCTGCTTaGCTGTGTTTGCAGATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LLPPVPSLRCWKSGLFLNHWWAA*LCLQMD Trigger: GTCCATCTGCAAACACAGCAAAGCAGCCCACCAATG...GTTCAAGAACAGACCACTCTTCCAGCACCGAAGGGAGGGGACAGGAGGAAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS GCA 90 bp | TGCAGCAGGCTTCTTGGCTGCATTGGTGGGCTGCTTTGCTGTGTTTaGAGATGGACTGTAGACAGCGCTCTGCTCAGTCTCCTCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CSRLLGCIGGLLCCV*RWTVDSALLSLLIC Trigger: ACAGATGAGGAGACTGAGCAGAGCGCTGTCTACAGTCCATCTGCAAACACAGCAAAGCAGCCCACCAATGCAGCCAAGAAGCCTGCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS CCA 90 bp | AGGTCATGCCAACACTCTCTGCAGCAGGCTTCTTGGCTGCATTGGTaGGCTGCTTTGCTGTGTTTGCAGATGGACTGTAGACAGCGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RSCQHSLQQASWLHW*AALLCLQMDCRQRS Trigger: AGAGCGCTGTCTACAGTCCATCTGCAAACACAGCAAAGCAGCCCACCAATGCAGCCAAGAAGCCTGCTGCAGAGAGTGTTGGCATGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS CCA 90 bp | AAGAGGTCATGCCAACACTCTCTGCAGCAGGCTTCTTGGCTGCATTaGTGGGCTGCTTTGCTGTGTTTGCAGATGGACTGTAGACAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: KRSCQHSLQQASWLH*WAALLCLQMDCRQR Trigger: GCGCTGTCTACAGTCCATCTGCAAACACAGCAAAGCAGCCCACCAATGCAGCCAAGAAGCCTGCTGCAGAGAGTGTTGGCATGACCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTGAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTTAGCTCCTGTTTCCTaGTCTATAGCTTCAAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: LVRAAACPKHTHGCPLVPLAPVS*SIASKT Trigger: GGTCTTTGAAGCTATAGACAAGGAAACAGGAGCTAA...GGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
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| CDS-3UTR CAA 90 bp | GAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTGCGCTTTGAATTATCAGCCTaGTCTCGTTCTCTGAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: EGSSLPQAYPWLSFSALRFELSA*SRSLRS Trigger: ACTTCTCAGAGAACGAGACAAGGCTGATAATTCAAA...GCGCAGGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
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| CDS GCA 90 bp | CAATACTCGATGTCTGTGACATTTCCACCACCAGGACTGGAGACTTaGCTGCTGGACATACACACAGTAGGCCAGCCTGAGAGGATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: QYSMSVTFPPPGLET*LLDIHTVGQPERMH Trigger: GTGCATCCTCTCAGGCTGGCCTACTGTGTGTATGTCCAGCAGGCAAGTCTCCAGTCCTGGTGGTGGAAATGTCACAGACATCGAGTATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR CAA 90 bp | CTGGTGAGGGCAGCAGCCTGCCCCAAGCATACCCATGGCTGTCCTTTAGTGCCCTTTCTAATACATTGGTaGGTCTTGCTGAAGAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LVRAAACPKHTHGCPLVPFLIHW*VLLKKG Trigger: CCCTTTCTTCAGCAAGACCAACCAATGTATTAGAAA...GGGCACTAAAGGACAGCCATGGGTATGCTTGGGGCAGGCTGCTGCCCTCACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTTCCTCCTGTCCCCTCCCTTCGGTGCTGGAAGAGTGGTCTGTTCTTGAACTTCTCTGGTTCTGCTTaGCTTTCAGCAGACAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LLPPVPSLRCWKSGLFLNFSGSA*LSADRS Trigger: ACTCCTGTCTGCTGAAAGCAAAGCAGAACCAGAGAA...GTTCAAGAACAGACCACTCTTCCAGCACCGAAGGGAGGGGACAGGAGGAAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR CAA 90 bp | CTGCTTCCTCCTGTCCCCTCCCTTCGGTGCTGGAAGAGTGGTCTGTTCTTGAACGCTTTTCTTCTGAATTaGCCAAAAAGGGTGGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLPPVPSLRCWKSGLFLNAFLLN*PKRVAL Trigger: GAGAGCCACCCTTTTTGGCAAATTCAGAAGAAAAGC...GTTCAAGAACAGACCACTCTTCCAGCACCGAAGGGAGGGGACAGGAGGAAGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS CCA 90 bp | ATGAGTTTGAAGAGGTCATGCCAACACTCTCTGCAGCAGGCTTCTTaGCTGCATTGGTGGGCTGCTTTGCTGTGTTTGCAGATGGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: MSLKRSCQHSLQQAS*LHWWAALLCLQMDC Trigger: ACAGTCCATCTGCAAACACAGCAAAGCAGCCCACCAATGCAGCCAAGAAGCCTGCTGCAGAGAGTGTTGGCATGACCTCTTCAAACTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR CAA 90 bp | CCTAAATATAAGGATTTGAGTAGAACTAAGCGAGCATGGCCCCAGCACTTATCCGGCTTCTTGGCTGCATaGGTGGGCTGCTTTGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PKYKDLSRTKRAWPQHLSGFLAA*VGCFAV Trigger: CACAGCAAAGCAGCCCACCAATGCAGCCAAGAAGCC...GGATAAGTGCTGGGGCCATGCTCGCTTAGTTCTACTCAAATCCTTATATTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGTCTCCCAGTGCAGAGTGCACATAATTATTTAGAACCCCCATCACTGCATACCAGGACTGGAGACTaGCCTGCTGGACATACACAC | + |
|
Preference number: 5 (lower is better) Translates to: QSLPVQSAHNYLEPPSLHTRTGD*PAGHTH Trigger: GTGTGTATGTCCAGCAGGCAAGTCTCCAGTCCTGGT...ATGCAGTGATGGGGGTTCTAAATAATTATGTGCACTCTGCACTGGGAGACTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS GCA 90 bp | GGAGTCCCACATGTAGTCTGCATCATGCCTTCACTCCTGGAGCCATaGTTCTGCACAGACAAGCCAAAATCAGTCACCTTTATGTTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: GVPHVVCIMPSLLEP*FCTDKPKSVTFMFK Trigger: CTTAAACATAAAGGTGACTGATTTTGGCTTGTCTGTGCAGAAGCATGGCTCCAGGAGTGAAGGCATGATGCAGACTACATGTGGGACTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 |
||
| CDS-3UTR CAA 90 bp | CCTAAATATAAGGATTTGAGTAGAACTAAGCGAGCATGGCCCCAGCACTTATCCCATTGGTGGGCTGCTTaGCTGTGTTTGCAGATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PKYKDLSRTKRAWPQHLSHWWAA*LCLQMD Trigger: GTCCATCTGCAAACACAGCAAAGCAGCCCACCAATG...GGATAAGTGCTGGGGCCATGCTCGCTTAGTTCTACTCAAATCCTTATATTTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGTCTCCCAGTGCAGAGTGCACATAATTATTTAGAACCCCCATCACTGCATCATTGGTGGGCTGCTTaGCTGTGTTTGCAGATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: QSLPVQSAHNYLEPPSLHHWWAA*LCLQMD Trigger: GTCCATCTGCAAACACAGCAAAGCAGCCCACCAATG...ATGCAGTGATGGGGGTTCTAAATAATTATGTGCACTCTGCACTGGGAGACTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS TCA 90 bp | TACCTGCTCCATCGTCCATTCTTATGTGTGGGATTTTTCCTACTGTaGCATTGCTCCGACTCCATTGTGCCTGAGGTTTTCTCTCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: YLLHRPFLCVGFFLL*HCSDSIVPEVFSPH Trigger: ATGTGGAGAGAAAACCTCAGGCACAATGGAGTCGGAGCAATGTCACAGTAGGAAAAATCCCACACATAAGAATGGACGATGGAGCAGGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS CCA 90 bp | CGAAACAAGGTAGTGGATTTCAGAGTGGTTTTAGCCACTGATGCATaGCCTACAGTCTCGGAGCTTTTCTCTGGTTCTGCTTTGCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RNKVVDFRVVLATDA*PTVSELFSGSALLS Trigger: TGAAAGCAAAGCAGAACCAGAGAAAAGCTCCGAGACTGTAGGCCATGCATCAGTGGCTAAAACCACTCTGAAATCCACTACCTTGTTTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS-3UTR CAA 90 bp | CCTAAATATAAGGATTTGAGTAGAACTAAGCGAGCATGGCCCCAGCACTTATCCTGCTGGACGATGAGTTaGAAGAGGTCATGCCAACAC | + |
|
Preference number: 5 (lower is better) Translates to: PKYKDLSRTKRAWPQHLSCWTMS*KRSCQH Trigger: GTGTTGGCATGACCTCTTCAAACTCATCGTCCAGCA...GGATAAGTGCTGGGGCCATGCTCGCTTAGTTCTACTCAAATCCTTATATTTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS-3UTR CAA 90 bp | CCTAAATATAAGGATTTGAGTAGAACTAAGCGAGCATGGCCCCAGCACTTATCCGTCTCCTCATCTGTGTaGGTCTCCTCATCACTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PKYKDLSRTKRAWPQHLSVSSSV*VSSSLS Trigger: AGAAAGTGATGAGGAGACCAACACAGATGAGGAGAC...GGATAAGTGCTGGGGCCATGCTCGCTTAGTTCTACTCAAATCCTTATATTTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS-3UTR CAA 90 bp | TGTGGCCATTTTATTAGTAATCCTCTAACAAAGTCTCCCAGTGCAGAGTGCACAGCTGCTTTGCTGTGTTaGCAGATGGACTGTAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: CGHFISNPLTKSPSAECTAALLC*QMDCRQ Trigger: CTGTCTACAGTCCATCTGCAAACACAGCAAAGCAGC...TGTGCACTCTGCACTGGGAGACTTTGTTAGAGGATTACTAATAAAATGGCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS-3UTR CAA 90 bp | CAAAGTCTCCCAGTGCAGAGTGCACATAATTATTTAGAACCCCCATCACTGCATTTCTCTGGTTCTGCTTaGCTTTCAGCAGACAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: QSLPVQSAHNYLEPPSLHFSGSA*LSADRS Trigger: ACTCCTGTCTGCTGAAAGCAAAGCAGAACCAGAGAA...ATGCAGTGATGGGGGTTCTAAATAATTATGTGCACTCTGCACTGGGAGACTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS-3UTR CAA 90 bp | TGTGGCCATTTTATTAGTAATCCTCTAACAAAGTCTCCCAGTGCAGAGTGCACAGTCTCCTCATCTGTGTaGGTCTCCTCATCACTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CGHFISNPLTKSPSAECTVSSSV*VSSSLS Trigger: AGAAAGTGATGAGGAGACCAACACAGATGAGGAGAC...TGTGCACTCTGCACTGGGAGACTTTGTTAGAGGATTACTAATAAAATGGCCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS-3UTR CAA 90 bp | TTCTGCCACAATGCCTGTGGCCATTTTATTAGTAATCCTCTAACAAAGTCTCCCGCTTTTCTTCTGAATTaGCCAAAAAGGGTGGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FCHNACGHFISNPLTKSPAFLLN*PKRVAL Trigger: GAGAGCCACCCTTTTTGGCAAATTCAGAAGAAAAGC...GGGAGACTTTGTTAGAGGATTACTAATAAAATGGCCACAGGCATTGTGGCAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
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| CDS-3UTR CAA 90 bp | CCTAAATATAAGGATTTGAGTAGAACTAAGCGAGCATGGCCCCAGCACTTATCCATACATTGGTTGGTCTaGCTGAAGAAAGGGTATTGC | + |
|
Preference number: 5 (lower is better) Translates to: PKYKDLSRTKRAWPQHLSIHWLV*LKKGYC Trigger: GCAATACCCTTTCTTCAGCAAGACCAACCAATGTAT...GGATAAGTGCTGGGGCCATGCTCGCTTAGTTCTACTCAAATCCTTATATTTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
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| CDS-3UTR CAA 90 bp | TGTGGCCATTTTATTAGTAATCCTCTAACAAAGTCTCCCAGTGCAGAGTGCACATTAGCTCCTGTTTCCTaGTCTATAGCTTCAAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: CGHFISNPLTKSPSAECTLAPVS*SIASKT Trigger: GGTCTTTGAAGCTATAGACAAGGAAACAGGAGCTAA...TGTGCACTCTGCACTGGGAGACTTTGTTAGAGGATTACTAATAAAATGGCCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
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| CDS-3UTR CAA 90 bp | CAAAGTCTCCCAGTGCAGAGTGCACATAATTATTTAGAACCCCCATCACTGCATTTTGAATTATCAGCCTaGTCTCGTTCTCTGAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: QSLPVQSAHNYLEPPSLHFELSA*SRSLRS Trigger: ACTTCTCAGAGAACGAGACAAGGCTGATAATTCAAA...ATGCAGTGATGGGGGTTCTAAATAATTATGTGCACTCTGCACTGGGAGACTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
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| CDS-3UTR CAA 90 bp | TGTGGCCATTTTATTAGTAATCCTCTAACAAAGTCTCCCAGTGCAGAGTGCACAATACATTGGTTGGTCTaGCTGAAGAAAGGGTATTGC | + |
|
Preference number: 5 (lower is better) Translates to: CGHFISNPLTKSPSAECTIHWLV*LKKGYC Trigger: GCAATACCCTTTCTTCAGCAAGACCAACCAATGTAT...TGTGCACTCTGCACTGGGAGACTTTGTTAGAGGATTACTAATAAAATGGCCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGTCTCCCAGTGCAGAGTGCACATAATTATTTAGAACCCCCATCACTGCATTTTCTAATACATTGGTaGGTCTTGCTGAAGAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QSLPVQSAHNYLEPPSLHFLIHW*VLLKKG Trigger: CCCTTTCTTCAGCAAGACCAACCAATGTATTAGAAA...ATGCAGTGATGGGGGTTCTAAATAATTATGTGCACTCTGCACTGGGAGACTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
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| CDS TCA 90 bp | TGTGGGATTTTTCCTACTGTGACATTGCTCCGACTCCATTGTGCCTaGGGTTTTCTCTCCACATTTGAAGTTCTTATGGACAAATCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: CGIFPTVTLLRLHCA*GFLSTFEVLMDKSF Trigger: AAAAGATTTGTCCATAAGAACTTCAAATGTGGAGAGAAAACCTCAGGCACAATGGAGTCGGAGCAATGTCACAGTAGGAAAAATCCCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR CAA 90 bp | TTCTGCCACAATGCCTGTGGCCATTTTATTAGTAATCCTCTAACAAAGTCTCCCTTTGAATTATCAGCCTaGTCTCGTTCTCTGAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: FCHNACGHFISNPLTKSPFELSA*SRSLRS Trigger: ACTTCTCAGAGAACGAGACAAGGCTGATAATTCAAA...GGGAGACTTTGTTAGAGGATTACTAATAAAATGGCCACAGGCATTGTGGCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGCCATTTTATTAGTAATCCTCTAACAAAGTCTCCCAGTGCAGAGTGCACATTTCTAATACATTGGTaGGTCTTGCTGAAGAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: CGHFISNPLTKSPSAECTFLIHW*VLLKKG Trigger: CCCTTTCTTCAGCAAGACCAACCAATGTATTAGAAA...TGTGCACTCTGCACTGGGAGACTTTGTTAGAGGATTACTAATAAAATGGCCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
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| CDS CCA 90 bp | GACTCCATTGTGCCTGAGGTTTTCTCTCCACATTTGAAGTTCTTATaGACAAATCTTTTAGAGAAGATTCTCTGCTGGTATTTCTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: DSIVPEVFSPHLKFL*TNLLEKILCWYFFP Trigger: AGGAAAGAAATACCAGCAGAGAATCTTCTCTAAAAGATTTGTCCATAAGAACTTCAAATGTGGAGAGAAAACCTCAGGCACAATGGAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS GCA 72 bp | GGTCATGCCAACACTCTCTGCAGCAGGCTTCTTGGCTaGATTGGTGGGCTGCTTTGCTGTGTTTGCAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: GHANTLCSRLLG*IGGLLCCVCRW Trigger: CCATCTGCAAACACAGCAAAGCAGCCCACCAATGCAGCCAAGAAGCCTGCTGCAGAGAGTGTTGGCATGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS CCA 72 bp | GGCTGCATTGGTGGGCTGCTTTGCTGTGTTTGCAGATaGACTGTAGACAGCGCTCTGCTCAGTCTCCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: GCIGGLLCCVCR*TVDSALLSLLI Trigger: GATGAGGAGACTGAGCAGAGCGCTGTCTACAGTCCATCTGCAAACACAGCAAAGCAGCCCACCAATGCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS CAA 72 bp | CTGCAGCAGGCTTCTTGGCTGCATTGGTGGGCTGCTTaGCTGTGTTTGCAGATGGACTGTAGACAGCGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LQQASWLHWWAA*LCLQMDCRQRS Trigger: AGAGCGCTGTCTACAGTCCATCTGCAAACACAGCAAAGCAGCCCACCAATGCAGCCAAGAAGCCTGCTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS GCA 72 bp | ATGTCTGTGACATTTCCACCACCAGGACTGGAGACTTaGCTGCTGGACATACACACAGTAGGCCAGCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: MSVTFPPPGLET*LLDIHTVGQPE Trigger: CTCAGGCTGGCCTACTGTGTGTATGTCCAGCAGGCAAGTCTCCAGTCCTGGTGGTGGAAATGTCACAGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
||
| CDS GCA 72 bp | CTTCTTGGCTGCATTGGTGGGCTGCTTTGCTGTGTTTaGAGATGGACTGTAGACAGCGCTCTGCTCAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLGCIGGLLCCV*RWTVDSALLSL Trigger: GAGACTGAGCAGAGCGCTGTCTACAGTCCATCTGCAAACACAGCAAAGCAGCCCACCAATGCAGCCAAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS CCA 72 bp | TGCCAACACTCTCTGCAGCAGGCTTCTTGGCTGCATTaGTGGGCTGCTTTGCTGTGTTTGCAGATGGACTGT | + |
|
Preference number: 6 (lower is better) Translates to: CQHSLQQASWLH*WAALLCLQMDC Trigger: ACAGTCCATCTGCAAACACAGCAAAGCAGCCCACCAATGCAGCCAAGAAGCCTGCTGCAGAGAGTGTTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS CAA 72 bp | GCTTCTTGGCTGCATTGGTGGGCTGCTTTGCTGTGTTaGCAGATGGACTGTAGACAGCGCTCTGCTCAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ASWLHWWAALLC*QMDCRQRSAQS Trigger: AGACTGAGCAGAGCGCTGTCTACAGTCCATCTGCAAACACAGCAAAGCAGCCCACCAATGCAGCCAAGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS CAA 72 bp | ATGCCAACACTCTCTGCAGCAGGCTTCTTGGCTGCATaGGTGGGCTGCTTTGCTGTGTTTGCAGATGGACTG | + |
|
Preference number: 6 (lower is better) Translates to: MPTLSAAGFLAA*VGCFAVFADGL Trigger: CAGTCCATCTGCAAACACAGCAAAGCAGCCCACCAATGCAGCCAAGAAGCCTGCTGCAGAGAGTGTTGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 ENSMUST00000141210.2 |
||
| CDS CAA 72 bp | GAAGAGGTCATGCCAACACTCTCTGCAGCAGGCTTCTaGGCTGCATTGGTGGGCTGCTTTGCTGTGTTTGCA | + |
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Preference number: 6 (lower is better) Translates to: EEVMPTLSAAGF*AALVGCFAVFA Trigger: TGCAAACACAGCAAAGCAGCCCACCAATGCAGCCAAGAAGCCTGCTGCAGAGAGTGTTGGCATGACCTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS CCA 72 bp | CAACACTCTCTGCAGCAGGCTTCTTGGCTGCATTGGTaGGCTGCTTTGCTGTGTTTGCAGATGGACTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: QHSLQQASWLHW*AALLCLQMDCR Trigger: TCTACAGTCCATCTGCAAACACAGCAAAGCAGCCCACCAATGCAGCCAAGAAGCCTGCTGCAGAGAGTGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS CAA 90 bp | GATGAGTTTGAAGAGGTCATGCCAACACTCTCTGCAGCAGGCTTCTaGGCTGCATTGGTGGGCTGCTTTGCTGTGTTTGCAGATGGACTG | + |
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Preference number: 6 (lower is better) Translates to: DEFEEVMPTLSAAGF*AALVGCFAVFADGL Trigger: CAGTCCATCTGCAAACACAGCAAAGCAGCCCACCAATGCAGCCAAGAAGCCTGCTGCAGAGAGTGTTGGCATGACCTCTTCAAACTCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS CAA 90 bp | GTTCTGCTTTGCTTTCAGCAGACAGGAGTTTGCTGGACGATGAGTTaGAAGAGGTCATGCCAACACTCTCTGCAGCAGGCTTCTTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: VLLCFQQTGVCWTMS*KRSCQHSLQQASWL Trigger: CAGCCAAGAAGCCTGCTGCAGAGAGTGTTGGCATGACCTCTTCAAACTCATCGTCCAGCAAACTCCTGTCTGCTGAAAGCAAAGCAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS GCA 72 bp | ACAGGAGTTTGCTGGACGATGAGTTTGAAGAGGTCATaGCAACACTCTCTGCAGCAGGCTTCTTGGCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: TGVCWTMSLKRS*QHSLQQASWLH Trigger: ATGCAGCCAAGAAGCCTGCTGCAGAGAGTGTTGGCATGACCTCTTCAAACTCATCGTCCAGCAAACTCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS GCA 72 bp | GGCCTACAGTCTCGGAGCTTTTCTCTGGTTCTGCTTTaGTTTCAGCAGACAGGAGTTTGCTGGACGATGAGT | + |
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Preference number: 6 (lower is better) Translates to: GLQSRSFSLVLL*FQQTGVCWTMS Trigger: ACTCATCGTCCAGCAAACTCCTGTCTGCTGAAAGCAAAGCAGAACCAGAGAAAAGCTCCGAGACTGTAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS GCA 72 bp | TGCATGGCCTACAGTCTCGGAGCTTTTCTCTGGTTCTaGTTTGCTTTCAGCAGACAGGAGTTTGCTGGACGA | + |
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Preference number: 6 (lower is better) Translates to: CMAYSLGAFLWF*FAFSRQEFAGR Trigger: TCGTCCAGCAAACTCCTGTCTGCTGAAAGCAAAGCAGAACCAGAGAAAAGCTCCGAGACTGTAGGCCATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS CAA 72 bp | TGCTTTCAGCAGACAGGAGTTTGCTGGACGATGAGTTaGAAGAGGTCATGCCAACACTCTCTGCAGCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: CFQQTGVCWTMS*KRSCQHSLQQA Trigger: AGCCTGCTGCAGAGAGTGTTGGCATGACCTCTTCAAACTCATCGTCCAGCAAACTCCTGTCTGCTGAAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS CAA 72 bp | TGGCCTACAGTCTCGGAGCTTTTCTCTGGTTCTGCTTaGCTTTCAGCAGACAGGAGTTTGCTGGACGATGAG | + |
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Preference number: 6 (lower is better) Translates to: WPTVSELFSGSA*LSADRSLLDDE Trigger: CTCATCGTCCAGCAAACTCCTGTCTGCTGAAAGCAAAGCAGAACCAGAGAAAAGCTCCGAGACTGTAGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS CAA 90 bp | ACTGATGCATGGCCTACAGTCTCGGAGCTTTTCTCTGGTTCTGCTTaGCTTTCAGCAGACAGGAGTTTGCTGGACGATGAGTTTGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: TDAWPTVSELFSGSA*LSADRSLLDDEFEE Trigger: CTCTTCAAACTCATCGTCCAGCAAACTCCTGTCTGCTGAAAGCAAAGCAGAACCAGAGAAAAGCTCCGAGACTGTAGGCCATGCATCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS GCA 72 bp | TCTCTGGTTCTGCTTTGCTTTCAGCAGACAGGAGTTTaGTGGACGATGAGTTTGAAGAGGTCATGCCAACAC | + |
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Preference number: 6 (lower is better) Translates to: SLVLLCFQQTGV*WTMSLKRSCQH Trigger: GTGTTGGCATGACCTCTTCAAACTCATCGTCCAGCAAACTCCTGTCTGCTGAAAGCAAAGCAGAACCAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS CCA 72 bp | CTGGTTCTGCTTTGCTTTCAGCAGACAGGAGTTTGCTaGACGATGAGTTTGAAGAGGTCATGCCAACACTCT | + |
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Preference number: 6 (lower is better) Translates to: LVLLCFQQTGVC*TMSLKRSCQHS Trigger: AGAGTGTTGGCATGACCTCTTCAAACTCATCGTCCAGCAAACTCCTGTCTGCTGAAAGCAAAGCAGAACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS CCA 72 bp | GTAGTGGATTTCAGAGTGGTTTTAGCCACTGATGCATaGCCTACAGTCTCGGAGCTTTTCTCTGGTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: VVDFRVVLATDA*PTVSELFSGSA Trigger: AGCAGAACCAGAGAAAAGCTCCGAGACTGTAGGCCATGCATCAGTGGCTAAAACCACTCTGAAATCCACTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS CAA 72 bp | TTCTCTGGTTCTGCTTTGCTTTCAGCAGACAGGAGTTaGCTGGACGATGAGTTTGAAGAGGTCATGCCAACA | + |
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Preference number: 6 (lower is better) Translates to: FSGSALLSADRS*LDDEFEEVMPT Trigger: TGTTGGCATGACCTCTTCAAACTCATCGTCCAGCAAACTCCTGTCTGCTGAAAGCAAAGCAGAACCAGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 ENSMUST00000141210.2 |
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| CDS TCA 72 bp | CATCGTCCATTCTTATGTGTGGGATTTTTCCTACTGTaGCATTGCTCCGACTCCATTGTGCCTGAGGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: HRPFLCVGFFLL*HCSDSIVPEVF Trigger: GAAAACCTCAGGCACAATGGAGTCGGAGCAATGTCACAGTAGGAAAAATCCCACACATAAGAATGGACGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
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| CDS CAA 72 bp | ATGCGATGGCTGATGCAAGACTTTGAATTATCAGCCTaGTCTCGTTCTCTGAGAAGTGCCCTCTTTGATCCA | + |
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Preference number: 6 (lower is better) Translates to: MRWLMQDFELSA*SRSLRSALFDP Trigger: TGGATCAAAGAGGGCACTTCTCAGAGAACGAGACAAGGCTGATAATTCAAAGTCTTGCATCAGCCATCGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 |
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| CDS CAA 90 bp | ACAAAGCTCCATCACGAGATACATTTTCTGAGGCGACTCAAACACTaGTTCCAGGTGGATGATGTGTTGATGGTTGACAGTCTTCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: TKLHHEIHFLRRLKH*FQVDDVLMVDSLQD Trigger: ATCCTGAAGACTGTCAACCATCAACACATCATCCACCTGGAACAAGTGTTTGAGTCGCCTCAGAAAATGTATCTCGTGATGGAGCTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 |
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| CDS TCA 72 bp | TGCAAGACTTTGAATTATCAGCCTTGTCTCGTTCTCTaGGAAGTGCCCTCTTTGATCCATAACTGCTTTGAG | + |
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Preference number: 6 (lower is better) Translates to: CKTLNYQPCLVL*EVPSLIHNCFE Trigger: CTCAAAGCAGTTATGGATCAAAGAGGGCACTTCTCAGAGAACGAGACAAGGCTGATAATTCAAAGTCTTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 |
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| CDS TCA 72 bp | GTGCACTATATCCTTGTTATGAAGATATGCGATGGCTaGTGCAAGACTTTGAATTATCAGCCTTGTCTCGTT | + |
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Preference number: 6 (lower is better) Translates to: VHYILVMKICDG*CKTLNYQPCLV Trigger: AACGAGACAAGGCTGATAATTCAAAGTCTTGCATCAGCCATCGCATATCTTCATAACAAGGATATAGTGCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 |
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| CDS GCA 72 bp | CAATATTCTTCCAAAGGTATAGAATTCCTCGATACCTaGTCCATCGTCCATTCTTATGTGTGGGATTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: QYSSKGIEFLDT*SIVHSYVWDFS Trigger: GGAAAAATCCCACACATAAGAATGGACGATGGAGCAGGTATCGAGGAATTCTATACCTTTGGAAGAATATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
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| CDS CAA 72 bp | TCCGACTCCATTGTGCCTGAGGTTTTCTCTCCACATTaGAAGTTCTTATGGACAAATCTTTTAGAGAAGATT | + |
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Preference number: 6 (lower is better) Translates to: SDSIVPEVFSPH*KFLWTNLLEKI Trigger: AATCTTCTCTAAAAGATTTGTCCATAAGAACTTCAAATGTGGAGAGAAAACCTCAGGCACAATGGAGTCGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121748.8 |
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| CDS CAA 72 bp | TCCATTCTTTCATCATTTCTAATACATTGGTTGGTCTaGCTGAAGAAAGGGTATTGCCTGTCAACCATTGGT | + |
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Preference number: 6 (lower is better) Translates to: SILSSFLIHWLV*LKKGYCLSTIG Trigger: ACCAATGGTTGACAGGCAATACCCTTTCTTCAGCAAGACCAACCAATGTATTAGAAATGATGAAAGAATGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090414.11 ENSMUST00000106745.9 ENSMUST00000121378.2 ENSMUST00000121748.8 |
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