Pregenerated sensors for STK32A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039954Ensembl transcript IDs: ENSMUST00000045477.6, ENSMUST00000236899.2, ENSMUST00000237797.2
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTGAGACCTGCTGGCCCTGCTGGCCTTTAGAACGATTTGAAAGCTaGTGTTTTGGAGGATGCAGGCAAGGTCCAGGAGAAGGTGGGGCC | + |
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Preference number: 1 (lower is better) Translates to: LETCWPCWPLERFES*CFGGCRQGPGEGGA Trigger: GGCCCCACCTTCTCCTGGACCTTGCCTGCATCCTCCAAAACAGCAGCTTTCAAATCGTTCTAAAGGCCAGCAGGGCCAGCAGGTCTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR TCA 90 bp | TCTTACCAGGGTTGCCCCATAGGTAGCTGCCTCATTCTTCCACTCTaGGTCACTGGGAATGCCCTGGAGATTTTCGGCTGCATTGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: SYQGCPIGSCLILPL*VTGNALEIFGCIAE Trigger: CTCTGCAATGCAGCCGAAAATCTCCAGGGCATTCCCAGTGACTCAGAGTGGAAGAATGAGGCAGCTACCTATGGGGCAACCCTGGTAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR TCA 90 bp | CGAGGAGCTGAGCAATGCACTTGCCATGCCTCATCATTGAACATATaGAAGGCAGCATCCCCGTCAACCTCCAACAGCAACGTGGGTGTC | + |
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Preference number: 1 (lower is better) Translates to: RGAEQCTCHASSLNI*KAASPSTSNSNVGV Trigger: GACACCCACGTTGCTGTTGGAGGTTGACGGGGATGCTGCCTTTCATATGTTCAATGATGAGGCATGGCAAGTGCATTGCTCAGCTCCTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR GCA 90 bp | GGAACTGAAGAGCTCAGAACCAGGGCTCTCTTCCTCTCCTGTCGCTaGAGAGTGCTGCCACCAACTTCGAAGACTACTCATTCATATTCT | + |
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Preference number: 1 (lower is better) Translates to: GTEELRTRALFLSCR*RVLPPTSKTTHSYS Trigger: AGAATATGAATGAGTAGTCTTCGAAGTTGGTGGCAGCACTCTGCAGCGACAGGAGAGGAAGAGAGCCCTGGTTCTGAGCTCTTCAGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR CCA 90 bp | AGATTTTCGGCTGCATTGCAGAGTGGCACTACATCAGGGGCACTCTaGTATTCAAACCCTGCTCAGGCCTTTCTGATGCTCTGTAGAGTA | + |
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Preference number: 1 (lower is better) Translates to: RFSAALQSGTTSGAL*YSNPAQAFLMLCRV Trigger: TACTCTACAGAGCATCAGAAAGGCCTGAGCAGGGTTTGAATACCAGAGTGCCCCTGATGTAGTGCCACTCTGCAATGCAGCCGAAAATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR GCA 90 bp | AATGCCAGTCTTACCCTCAGCTCTTGTTTTCGACACAAACTTTCTTaGCCCAGTAGCTACCCTCTACTTCCATGTCTGCCTTTCCCAAAT | + |
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Preference number: 1 (lower is better) Translates to: NASLTLSSCFRHKLS*PSSYPLLPCLPFPN Trigger: ATTTGGGAAAGGCAGACATGGAAGTAGAGGGTAGCTACTGGGGCAAGAAAGTTTGTGTCGAAAACAAGAGCTGAGGGTAAGACTGGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR TCA 90 bp | GGATCTACCCAGGTCTTCGTGCATGCTAAGCACAGATTCTACTACTaGGCCACAGCCCAAGCACAATGGATTTCTTTTGTGTGTTTGTTT | + |
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Preference number: 1 (lower is better) Translates to: GSTQVFVHAKHRFYY*ATAQAQWISFVCLF Trigger: AAACAAACACACAAAAGAAATCCATTGTGCTTGGGCTGTGGCTCAGTAGTAGAATCTGTGCTTAGCATGCACGAAGACCTGGGTAGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR GCA 90 bp | TTCCCAAATGATATCAATCAATCAAGCTGGTCACTTGGACCAGCTTaGTGCCACCATGGCTATGCCTGTACTCTCCATAAGGAATACCAT | + |
|
Preference number: 1 (lower is better) Translates to: FPNDINQSSWSLGPA*CHHGYACTLHKEYH Trigger: ATGGTATTCCTTATGGAGAGTACAGGCATAGCCATGGTGGCAGCAAGCTGGTCCAAGTGACCAGCTTGATTGATTGATATCATTTGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR CCA 90 bp | TATTTATTCCCGATGGAACATCTTTATTCCTACCTAATCAAGCTTTaGAATTCTGGCCCCTGTGTGATATTCTCTAGCCCTGAAGAGGCC | + |
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Preference number: 1 (lower is better) Translates to: YLFPMEHLYSYLIKL*NSGPCVIFSSPEEA Trigger: GGCCTCTTCAGGGCTAGAGAATATCACACAGGGGCCAGAATTCCAAAGCTTGATTAGGTAGGAATAAAGATGTTCCATCGGGAATAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR TCA 90 bp | GCAAACAGATTCCGTGCCCATCCAGTTCCCCACTTCAAGATCTCATaGGTCTTTGCTACTTCTAATCTAACCTATGTATTTATTCCCGAT | + |
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Preference number: 1 (lower is better) Translates to: ANRFRAHPVPHFKIS*VFATSNLTYVFIPD Trigger: ATCGGGAATAAATACATAGGTTAGATTAGAAGTAGCAAAGACTCATGAGATCTTGAAGTGGGGAACTGGATGGGCACGGAATCTGTTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR TCA 90 bp | ACCTCTGGGATCTATAAGCCATCCTGCTTCTTTAAGTGTAACTCTTaGGTAGATATGTGTAAATTGTTCCCTATTTTAGTTAACCAATAC | + |
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Preference number: 1 (lower is better) Translates to: TSGIYKPSCFFKCNS*VDMCKLFPILVNQY Trigger: GTATTGGTTAACTAAAATAGGGAACAATTTACACATATCTACTCAAGAGTTACACTTAAAGAAGCAGGATGGCTTATAGATCCCAGAGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR GCA 90 bp | AAAAACTGGAGCATGCATGTGGTCCCTGACACTTGTGGGGTATCAGCCGGGAGCGCATGCATGCGTGCGTaGGTGTGCGTGCGTGCGTGC | + |
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Preference number: 2 (lower is better) Translates to: KNWSMHVVPDTCGVSAGSACMRA*VCVRAC Trigger: GCACGCACGCACGCACACGCACGCACGCATGCATGC...GCTCCCGGCTGATACCCCACAAGTGTCAGGGACCACATGCATGCTCCAGTTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR GCA 90 bp | ATGACCTCAGCCTACACCAGGGCTGCAGTAGTGTCATTGGCTCTTAGCAGGACAGTGTACGTGCTGGCGTaGGTGCGTGCGTGTGCGTGC | + |
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Preference number: 2 (lower is better) Translates to: MTSAYTRAAVVSLALSRTVYVLA*VRACAC Trigger: GCACGCACACGCACGCACGCACGCCAGCACGTACAC...TGTCCTGCTAAGAGCCAATGACACTACTGCAGCCCTGGTGTAGGCTGAGGTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR GCA 90 bp | TATTGTGTGGACAGAACACAGGAACACCGAGGAGCTGAGCAATGCACTTGCCATGTGTACGTGCTGGCGTaGGTGCGTGCGTGTGCGTGC | + |
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Preference number: 2 (lower is better) Translates to: YCVDRTQEHRGAEQCTCHVYVLA*VRACAC Trigger: GCACGCACACGCACGCACGCACGCCAGCACGTACAC...ATGGCAAGTGCATTGCTCAGCTCCTCGGTGTTCCTGTGTTCTGTCCACACAATA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR GCA 90 bp | AAGTTCTCGGCCCTAATCCTTCTCAGAAATGTGGCTGTTTCATCTGTTGGGTGCGCATGCATGCGTGCGTaGGTGTGCGTGCGTGCGTGC | + |
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Preference number: 2 (lower is better) Translates to: KFSALILLRNVAVSSVGCACMRA*VCVRAC Trigger: GCACGCACGCACGCACACGCACGCACGCATGCATGC...GCACCCAACAGATGAAACAGCCACATTTCTGAGAAGGATTAGGGCCGAGAACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAACTGGAGCATGCATGTGGTCCCTGACACTTGTGGGGTATCAGCCGGGAGCCTAAGTCATGAGGTGTaGCAGTGGCAGGGACTCCTG | + |
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Preference number: 2 (lower is better) Translates to: KNWSMHVVPDTCGVSAGSLSHEV*QWQGLL Trigger: CAGGAGTCCCTGCCACTGCCACACCTCATGACTTAG...GCTCCCGGCTGATACCCCACAAGTGTCAGGGACCACATGCATGCTCCAGTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTTCTCGGCCCTAATCCTTCTCAGAAATGTGGCTGTTTCATCTGTTGGGTGCCGGTGTGCCTGTCATTaGCCCACCTCCCACCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: KFSALILLRNVAVSSVGCRCACH*PTSHPA Trigger: TGCAGGGTGGGAGGTGGGTCAATGACAGGCACACCG...GCACCCAACAGATGAAACAGCCACATTTCTGAGAAGGATTAGGGCCGAGAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR GCA 90 bp | AAGTTCTCGGCCCTAATCCTTCTCAGAAATGTGGCTGTTTCATCTGTTGGGTGCACGTGCTGGCGTGCGTaGGTGCGTGTGCGTGCATGT | + |
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Preference number: 2 (lower is better) Translates to: KFSALILLRNVAVSSVGCTCWRA*VRVRAC Trigger: ACATGCACGCACACGCACGCACGCACGCCAGCACGT...GCACCCAACAGATGAAACAGCCACATTTCTGAGAAGGATTAGGGCCGAGAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR CCA 90 bp | TCACAGAGTCAATGCGTGCTGAAGCTGGAACTGAAGAGCTCAGAACCAGGGCTCCTAAGTCATGAGGTGTaGCAGTGGCAGGGACTCCTG | + |
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Preference number: 2 (lower is better) Translates to: SQSQCVLKLELKSSEPGLLSHEV*QWQGLL Trigger: CAGGAGTCCCTGCCACTGCCACACCTCATGACTTAG...GAGCCCTGGTTCTGAGCTCTTCAGTTCCAGCTTCAGCACGCATTGACTCTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR GCA 90 bp | ACATCAGGGGCACTCTGGTATTCAAACCCTGCTCAGGCCTTTCTGATGCTCTGTTTCTGTCTCTGGGGATaGTGGGGATCTACCCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: TSGALWYSNPAQAFLMLCFCLWG*WGSTQV Trigger: GACCTGGGTAGATCCCCAGCATCCCCAGAGACAGAA...ACAGAGCATCAGAAAGGCCTGAGCAGGGTTTGAATACCAGAGTGCCCCTGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR TCA 90 bp | GAGACCTGCTGGCCCTGCTGGCCTTTAGAACGATTTGAAAGCTGCTGTTTTGGAACCCATTCATCCCTCTaGAGGTCAGGGCAGATGCTT | + |
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Preference number: 2 (lower is better) Translates to: ETCWPCWPLERFESCCFGTHSSL*RSGQML Trigger: AAGCATCTGCCCTGACCTTCAGAGGGATGAATGGGT...TCCAAAACAGCAGCTTTCAAATCGTTCTAAAGGCCAGCAGGGCCAGCAGGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR GCA 90 bp | ATGACCTCAGCCTACACCAGGGCTGCAGTAGTGTCATTGGCTCTTAGCAGGACAAGGTCACAGAGTCAATaGGTGCTGAAGCTGGAACTG | + |
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Preference number: 2 (lower is better) Translates to: MTSAYTRAAVVSLALSRTRSQSQ*VLKLEL Trigger: CAGTTCCAGCTTCAGCACGCATTGACTCTGTGACCT...TGTCCTGCTAAGAGCCAATGACACTACTGCAGCCCTGGTGTAGGCTGAGGTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCTCTGGGGATGCTGGGGATCTACCCAGGTCTTCGTGCATGCTAAGCACAGACCGTGCTCAGAAAGATaGCCACTGGGAAGAAAAACT | + |
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Preference number: 2 (lower is better) Translates to: CLWGCWGSTQVFVHAKHRPCSER*PLGRKT Trigger: AGTTTTTCTTCCCAGTGGGCATCTTTCTGAGCACGG...TCTGTGCTTAGCATGCACGAAGACCTGGGTAGATCCCCAGCATCCCCAGAGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR GCA 90 bp | CCATGCCTCATCATTGAACATATGAAAGGCAGCATCCCCGTCAACCTCCAACAGGGATCTTACCAGGGTTaGCCCATAGGTAGCTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: PCLIIEHMKGSIPVNLQQGSYQG*PIGSCL Trigger: GAGGCAGCTACCTATGGGGCAACCCTGGTAAGATCC...CTGTTGGAGGTTGACGGGGATGCTGCCTTTCATATGTTCAATGATGAGGCATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR CCA 90 bp | CCATGCCTCATCATTGAACATATGAAAGGCAGCATCCCCGTCAACCTCCAACAGACTGGAGCATGCATGTaGTCCCTGACACTTGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: PCLIIEHMKGSIPVNLQQTGACM*SLTLVG Trigger: CCCCACAAGTGTCAGGGACCACATGCATGCTCCAGT...CTGTTGGAGGTTGACGGGGATGCTGCCTTTCATATGTTCAATGATGAGGCATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGTGCCTGTCATTGACCCACCTCCCACCCTGCACTTTCACCAGCATATCCCCAAGGGAAAGTTTGCTTaGTTCCAAAACTCCTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: GVPVIDPPPTLHFHQHIPKGKFA*FQNSWK Trigger: TTTCCAGGAGTTTTGGAAGCAAGCAAACTTTCCCTT...GGGGATATGCTGGTGAAAGTGCAGGGTGGGAGGTGGGTCAATGACAGGCACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAACTGGAGCATGCATGTGGTCCCTGACACTTGTGGGGTATCAGCCGGGAGCCAAGCTTTGGAATTCTaGCCCCTGTGTGATATTCTC | + |
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Preference number: 2 (lower is better) Translates to: KNWSMHVVPDTCGVSAGSQALEF*PLCDIL Trigger: GAGAATATCACACAGGGGCCAGAATTCCAAAGCTTG...GCTCCCGGCTGATACCCCACAAGTGTCAGGGACCACATGCATGCTCCAGTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR CCA 90 bp | ACATCAGGGGCACTCTGGTATTCAAACCCTGCTCAGGCCTTTCTGATGCTCTGTACCTGCTGGCCCTGCTaGCCTTTAGAACGATTTGAA | + |
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Preference number: 2 (lower is better) Translates to: TSGALWYSNPAQAFLMLCTCWPC*PLERFE Trigger: TTCAAATCGTTCTAAAGGCCAGCAGGGCCAGCAGGT...ACAGAGCATCAGAAAGGCCTGAGCAGGGTTTGAATACCAGAGTGCCCCTGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR TCA 90 bp | CCATGCCTCATCATTGAACATATGAAAGGCAGCATCCCCGTCAACCTCCAACAGGCATATCCCCAGTTCTaGAAGCAACCGTGCTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: PCLIIEHMKGSIPVNLQQAYPQF*KQPCSE Trigger: TTCTGAGCACGGTTGCTTTCAGAACTGGGGATATGC...CTGTTGGAGGTTGACGGGGATGCTGCCTTTCATATGTTCAATGATGAGGCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR TCA 90 bp | TATTGTGTGGACAGAACACAGGAACACCGAGGAGCTGAGCAATGCACTTGCCATGCATATCCCCAGTTCTaGAAGCAACCGTGCTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: YCVDRTQEHRGAEQCTCHAYPQF*KQPCSE Trigger: TTCTGAGCACGGTTGCTTTCAGAACTGGGGATATGC...ATGGCAAGTGCATTGCTCAGCTCCTCGGTGTTCCTGTGTTCTGTCCACACAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGCTCAGAACCAGCTATTCTGCACAGCCGGATTCAGTGATTCTGTCTCTGGGGAACGATTTGAAAGCTaGTGTTTTGGAGGATGCAGG | + |
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Preference number: 2 (lower is better) Translates to: GAQNQLFCTAGFSDSVSGERFES*CFGGCR Trigger: CCTGCATCCTCCAAAACAGCAGCTTTCAAATCGTTC...CCCAGAGACAGAATCACTGAATCCGGCTGTGCAGAATAGCTGGTTCTGAGCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR GCA 90 bp | ACATCAGGGGCACTCTGGTATTCAAACCCTGCTCAGGCCTTTCTGATGCTCTGTCTACCCAGGTCTTCGTaGATGCTAAGCACAGATTCT | + |
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Preference number: 2 (lower is better) Translates to: TSGALWYSNPAQAFLMLCLPRSS*MLSTDS Trigger: AGAATCTGTGCTTAGCATGCACGAAGACCTGGGTAG...ACAGAGCATCAGAAAGGCCTGAGCAGGGTTTGAATACCAGAGTGCCCCTGATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTTCTCGGCCCTAATCCTTCTCAGAAATGTGGCTGTTTCATCTGTTGGGTGCATTCTGGCCCCTGTGTaGTATTCTCTAGCCCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: KFSALILLRNVAVSSVGCILAPV*YSLALK Trigger: CTTCAGGGCTAGAGAATATCACACAGGGGCCAGAAT...GCACCCAACAGATGAAACAGCCACATTTCTGAGAAGGATTAGGGCCGAGAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR TCA 90 bp | GAGACCTGCTGGCCCTGCTGGCCTTTAGAACGATTTGAAAGCTGCTGTTTTGGACTGACACTCTGCACATaGGTGAAATACACAGACAAG | + |
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Preference number: 2 (lower is better) Translates to: ETCWPCWPLERFESCCFGLTLCT*VKYTDK Trigger: CTTGTCTGTGTATTTCACTCATGTGCAGAGTGTCAG...TCCAAAACAGCAGCTTTCAAATCGTTCTAAAGGCCAGCAGGGCCAGCAGGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR GCA 90 bp | AAGTTCTCGGCCCTAATCCTTCTCAGAAATGTGGCTGTTTCATCTGTTGGGTGCAGGTCACAGAGTCAATaGGTGCTGAAGCTGGAACTG | + |
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Preference number: 2 (lower is better) Translates to: KFSALILLRNVAVSSVGCRSQSQ*VLKLEL Trigger: CAGTTCCAGCTTCAGCACGCATTGACTCTGTGACCT...GCACCCAACAGATGAAACAGCCACATTTCTGAGAAGGATTAGGGCCGAGAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCTCTGGGGATGCTGGGGATCTACCCAGGTCTTCGTGCATGCTAAGCACAGACAAGAGTTGAAAACATaGTTTGTAAAGCCACCTACG | + |
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Preference number: 2 (lower is better) Translates to: CLWGCWGSTQVFVHAKHRQELKT*FVKPPT Trigger: CGTAGGTGGCTTTACAAAGCATGTTTTCAACTCTTG...TCTGTGCTTAGCATGCACGAAGACCTGGGTAGATCCCCAGCATCCCCAGAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR GCA 90 bp | AAGTTCTCGGCCCTAATCCTTCTCAGAAATGTGGCTGTTTCATCTGTTGGGTGCTTTGAACTTGAGACCTaGTGGCCCTGCTGGCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: KFSALILLRNVAVSSVGCFELET*WPCWPL Trigger: TAAAGGCCAGCAGGGCCAGCAGGTCTCAAGTTCAAA...GCACCCAACAGATGAAACAGCCACATTTCTGAGAAGGATTAGGGCCGAGAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR TCA 90 bp | GAGACCTGCTGGCCCTGCTGGCCTTTAGAACGATTTGAAAGCTGCTGTTTTGGACACTCTGCACATGAGTaGAATACACAGACAAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: ETCWPCWPLERFESCCFGHSAHE*NTQTRK Trigger: CTTTCTTGTCTGTGTATTTCACTCATGTGCAGAGTG...TCCAAAACAGCAGCTTTCAAATCGTTCTAAAGGCCAGCAGGGCCAGCAGGTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR TCA 90 bp | CCATGCCTCATCATTGAACATATGAAAGGCAGCATCCCCGTCAACCTCCAACAGCTGACACTCTGCACATaGGTGAAATACACAGACAAG | + |
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Preference number: 2 (lower is better) Translates to: PCLIIEHMKGSIPVNLQQLTLCT*VKYTDK Trigger: CTTGTCTGTGTATTTCACTCATGTGCAGAGTGTCAG...CTGTTGGAGGTTGACGGGGATGCTGCCTTTCATATGTTCAATGATGAGGCATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAGGTGGGGCCAGGTGAGGGCAGGTAAATCCATAACACCTCTAACACGTTGGAAGGGAAAGTTTGCTTaGTTCCAAAACTCCTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: RRWGQVRAGKSITPLTRWKGKFA*FQNSWK Trigger: TTTCCAGGAGTTTTGGAAGCAAGCAAACTTTCCCTT...CCAACGTGTTAGAGGTGTTATGGATTTACCTGCCCTCACCTGGCCCCACCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGCTCAGAACCAGCTATTCTGCACAGCCGGATTCAGTGATTCTGTCTCTGGGCTCTACTTCCATGTCTaGCTTTCCCAAATGATATCA | + |
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Preference number: 2 (lower is better) Translates to: GAQNQLFCTAGFSDSVSGLYFHV*LSQMIS Trigger: TGATATCATTTGGGAAAGGCAGACATGGAAGTAGAG...CCCAGAGACAGAATCACTGAATCCGGCTGTGCAGAATAGCTGGTTCTGAGCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR CCA 90 bp | TTAATCCATGCAGGCACATTTATATCACATACACTATGGCTCAACACAAGCATATGTGCGTGTACGTGCTaGCGTGCGTGCGTGCGTGTG | + |
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Preference number: 2 (lower is better) Translates to: LIHAGTFISHTLWLNTSICACTC*RACVRV Trigger: CACACGCACGCACGCACGCCAGCACGTACACGCACA...TATGCTTGTGTTGAGCCATAGTGTATGTGATATAAATGTGCCTGCATGGATTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR GCA 90 bp | CCATGCCTCATCATTGAACATATGAAAGGCAGCATCCCCGTCAACCTCCAACAGGAAGGTCAGGGCAGATaGTTTGAGATAAACAGTGAT | + |
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Preference number: 2 (lower is better) Translates to: PCLIIEHMKGSIPVNLQQEGQGR*FEINSD Trigger: ATCACTGTTTATCTCAAAGCATCTGCCCTGACCTTC...CTGTTGGAGGTTGACGGGGATGCTGCCTTTCATATGTTCAATGATGAGGCATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| 3UTR-3UTR CCA 90 bp | CCATGCCTCATCATTGAACATATGAAAGGCAGCATCCCCGTCAACCTCCAACAGTCCTTCTCAGAAATGTaGCTGTTTCATCTGTTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: PCLIIEHMKGSIPVNLQQSFSEM*LFHLLG Trigger: ACCCAACAGATGAAACAGCCACATTTCTGAGAAGGA...CTGTTGGAGGTTGACGGGGATGCTGCCTTTCATATGTTCAATGATGAGGCATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAAGTGTCAGACTTCAACAATATGTTAAGCAGCAGGGCAATTCTGCCAGCCATCACATAGTAGGCACTTaGAAACAGATTCCGTGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: ESVRLQQYVKQQGNSASHHIVGT*KQIPCP Trigger: TGGGCACGGAATCTGTTTGCAAGTGCCTACTATGTG...ATGGCTGGCAGAATTGCCCTGCTGCTTAACATATTGTTGAAGTCTGACACTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR-3UTR TCA 90 bp | GAACATCTTTATTCCTACCTAATCAAGCTTTGGAATTCTGGCCCCTGTGTGATAATATTCTCTAAGTCATaGGGTGTGGCAGTGGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: EHLYSYLIKLWNSGPCVIIFSKS*GVAVAG Trigger: CCCTGCCACTGCCACACCTCATGACTTAGAGAATAT...TATCACACAGGGGCCAGAATTCCAAAGCTTGATTAGGTAGGAATAAAGATGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR-3UTR TCA 90 bp | CCATGCCTCATCATTGAACATATGAAAGGCAGCATCCCCGTCAACCTCCAACAGCACTTCAAGATCTCATaGGTCTTTGCTACTTCTAAT | + |
|
Preference number: 2 (lower is better) Translates to: PCLIIEHMKGSIPVNLQQHFKIS*VFATSN Trigger: ATTAGAAGTAGCAAAGACTCATGAGATCTTGAAGTG...CTGTTGGAGGTTGACGGGGATGCTGCCTTTCATATGTTCAATGATGAGGCATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGGCACTCGAAGAAGTTCTTCAAAGATCTTGTATGCGTGAGCACAGGGCAGTTCACTTCAAGATCTCATaGGTCTTTGCTACTTCTAAT | + |
|
Preference number: 2 (lower is better) Translates to: GALEEVLQRSCMREHRAVHFKIS*VFATSN Trigger: ATTAGAAGTAGCAAAGACTCATGAGATCTTGAAGTG...AACTGCCCTGTGCTCACGCATACAAGATCTTTGAAGAACTTCTTCGAGTGCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR-3UTR GCA 90 bp | TTAATCCATGCAGGCACATTTATATCACATACACTATGGCTCAACACAAGCATAACCCACCTCCCACCCTaGACTTTCACCAGCATATCC | + |
|
Preference number: 2 (lower is better) Translates to: LIHAGTFISHTLWLNTSITHLPP*TFTSIS Trigger: GGATATGCTGGTGAAAGTGCAGGGTGGGAGGTGGGT...TATGCTTGTGTTGAGCCATAGTGTATGTGATATAAATGTGCCTGCATGGATTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR-3UTR GCA 90 bp | AATCCATGCAGGCACATTTATATCACATACACTATGGCTCAACACAAGCATATATTCTGTCTCTGGGGATaGTGGGGATCTACCCAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: NPCRHIYITYTMAQHKHIFCLWG*WGSTQV Trigger: GACCTGGGTAGATCCCCAGCATCCCCAGAGACAGAA...TATATGCTTGTGTTGAGCCATAGTGTATGTGATATAAATGTGCCTGCATGGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR-3UTR CCA 90 bp | ACATCAGGGGCACTCTGGTATTCAAACCCTGCTCAGGCCTTTCTGATGCTCTGTTGTATTTATTCCCGATaGAACATCTTTATTCCTACC | + |
|
Preference number: 2 (lower is better) Translates to: TSGALWYSNPAQAFLMLCCIYSR*NIFIPT Trigger: GGTAGGAATAAAGATGTTCCATCGGGAATAAATACA...ACAGAGCATCAGAAAGGCCTGAGCAGGGTTTGAATACCAGAGTGCCCCTGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR-3UTR TCA 90 bp | AATCCATGCAGGCACATTTATATCACATACACTATGGCTCAACACAAGCATATATTCAGGAGTACTCTCTaGTCCTCTGGAGAAGCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: NPCRHIYITYTMAQHKHIFRSTL*SSGEAG Trigger: ACCTGCTTCTCCAGAGGATCAGAGAGTACTCCTGAA...TATATGCTTGTGTTGAGCCATAGTGTATGTGATATAAATGTGCCTGCATGGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAAGTGTCAGACTTCAACAATATGTTAAGCAGCAGGGCAATTCTGCCAGCCATTTTCAAGGGAAAGTTTaGTTGCTTCCAAAACTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: ESVRLQQYVKQQGNSASHFQGKV*LLPKLL Trigger: CAGGAGTTTTGGAAGCAAGCAAACTTTCCCTTGAAA...ATGGCTGGCAGAATTGCCCTGCTGCTTAACATATTGTTGAAGTCTGACACTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR-3UTR GCA 90 bp | AATCCATGCAGGCACATTTATATCACATACACTATGGCTCAACACAAGCATATATGCTGTTTTGGAGGATaGAGGCAAGGTCCAGGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: NPCRHIYITYTMAQHKHICCFGG*RQGPGE Trigger: TTCTCCTGGACCTTGCCTGCATCCTCCAAAACAGCA...TATATGCTTGTGTTGAGCCATAGTGTATGTGATATAAATGTGCCTGCATGGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR-3UTR GCA 90 bp | TTAATCCATGCAGGCACATTTATATCACATACACTATGGCTCAACACAAGCATACGACACAAACTTTCTTaGCCCAGTAGCTACCCTCTA | + |
|
Preference number: 2 (lower is better) Translates to: LIHAGTFISHTLWLNTSIRHKLS*PSSYPL Trigger: TAGAGGGTAGCTACTGGGGCAAGAAAGTTTGTGTCG...TATGCTTGTGTTGAGCCATAGTGTATGTGATATAAATGTGCCTGCATGGATTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAAGTGTCAGACTTCAACAATATGTTAAGCAGCAGGGCAATTCTGCCAGCCATTGTATTTATTCCCGATaGAACATCTTTATTCCTACC | + |
|
Preference number: 2 (lower is better) Translates to: ESVRLQQYVKQQGNSASHCIYSR*NIFIPT Trigger: GGTAGGAATAAAGATGTTCCATCGGGAATAAATACA...ATGGCTGGCAGAATTGCCCTGCTGCTTAACATATTGTTGAAGTCTGACACTTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR-3UTR CCA 90 bp | AATCCATGCAGGCACATTTATATCACATACACTATGGCTCAACACAAGCATATATCCTTCTCAGAAATGTaGCTGTTTCATCTGTTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: NPCRHIYITYTMAQHKHISFSEM*LFHLLG Trigger: ACCCAACAGATGAAACAGCCACATTTCTGAGAAGGA...TATATGCTTGTGTTGAGCCATAGTGTATGTGATATAAATGTGCCTGCATGGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR-3UTR GCA 90 bp | AATCCATGCAGGCACATTTATATCACATACACTATGGCTCAACACAAGCATATACTCTACTTCCATGTCTaGCTTTCCCAAATGATATCA | + |
|
Preference number: 2 (lower is better) Translates to: NPCRHIYITYTMAQHKHILYFHV*LSQMIS Trigger: TGATATCATTTGGGAAAGGCAGACATGGAAGTAGAG...TATATGCTTGTGTTGAGCCATAGTGTATGTGATATAAATGTGCCTGCATGGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR-3UTR CCA 90 bp | TTAATCCATGCAGGCACATTTATATCACATACACTATGGCTCAACACAAGCATAACAGCCCAAGCACAATaGATTTCTTTTGTGTGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: LIHAGTFISHTLWLNTSITAQAQ*ISFVCL Trigger: CAAACACACAAAAGAAATCCATTGTGCTTGGGCTGT...TATGCTTGTGTTGAGCCATAGTGTATGTGATATAAATGTGCCTGCATGGATTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR-3UTR TCA 90 bp | AATCCATGCAGGCACATTTATATCACATACACTATGGCTCAACACAAGCATATAAAACATACCAGAGTCTaGTATTTTACAACTGCCATG | + |
|
Preference number: 2 (lower is better) Translates to: NPCRHIYITYTMAQHKHIKHTRV*YFTTAM Trigger: CATGGCAGTTGTAAAATATCAGACTCTGGTATGTTT...TATATGCTTGTGTTGAGCCATAGTGTATGTGATATAAATGTGCCTGCATGGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTGCTCAGAACCAGCTATTCTGCACAGCCGGATTCAGTGATTCTGTCTCTGGGGTCACTTGGACCAGCTaGCTGCCACCATGGCTATGC | + |
|
Preference number: 3 (lower is better) Translates to: GAQNQLFCTAGFSDSVSGVTWTS*LPPWLC Trigger: GCATAGCCATGGTGGCAGCAAGCTGGTCCAAGTGAC...CCCAGAGACAGAATCACTGAATCCGGCTGTGCAGAATAGCTGGTTCTGAGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR TCA 72 bp | GGTTGCCCCATAGGTAGCTGCCTCATTCTTCCACTCTaGGTCACTGGGAATGCCCTGGAGATTTTCGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GCPIGSCLILPL*VTGNALEIFGC Trigger: GCAGCCGAAAATCTCCAGGGCATTCCCAGTGACTCAGAGTGGAAGAATGAGGCAGCTACCTATGGGGCAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR GCA 72 bp | TCTTCTGTGTGTGATAATCAGGACTTTCCCGCCAGGTaGCAAGAACTGTCCCCCGAAGCACTGTCCCCCGAA | + |
|
Preference number: 3 (lower is better) Translates to: SSVCDNQDFPAR*QELSPEALSPE Trigger: TTCGGGGGACAGTGCTTCGGGGGACAGTTCTTGGCACCTGGCGGGAAAGTCCTGATTATCACACACAGAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAAACTGGAGCATGCATGTGGTCCCTGACACTTGTGGGGTATCAGCCGGGAGCGCACATAGTAGGCACTaGCAAACAGATTCCGTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: KNWSMHVVPDTCGVSAGSAHSRH*QTDSVP Trigger: GGGCACGGAATCTGTTTGCAAGTGCCTACTATGTGC...GCTCCCGGCTGATACCCCACAAGTGTCAGGGACCACATGCATGCTCCAGTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR TCA 72 bp | GGGAGCAGAATCGAGTCGTCTCTGGGTTGCTATGTTTaGCCCATTCATCCCTCTGAAGGTCAGGGCAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: GSRIESSLGCYV*PIHPSEGQGRC Trigger: GCATCTGCCCTGACCTTCAGAGGGATGAATGGGTCAAACATAGCAACCCAGAGACGACTCGATTCTGCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR TCA 72 bp | TGCTCAGAACCAGCTATTCTGCACAGCCGGATTCAGTaGTTCTGTCTCTGGGGATGCTGGGGATCTACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: CSEPAILHSRIQ*FCLWGCWGSTQ Trigger: CTGGGTAGATCCCCAGCATCCCCAGAGACAGAATCACTGAATCCGGCTGTGCAGAATAGCTGGTTCTGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR CCA 72 bp | GTGGGGTATCAGCCGGGAGCAGAATCGAGTCGTCTCTaGGTTGCTATGTTTGACCCATTCATCCCTCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: VGYQPGAESSRL*VAMFDPFIPLK Trigger: CTTCAGAGGGATGAATGGGTCAAACATAGCAACCCAGAGACGACTCGATTCTGCTCCCGGCTGATACCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR CCA 72 bp | GCTGCATTGCAGAGTGGCACTACATCAGGGGCACTCTaGTATTCAAACCCTGCTCAGGCCTTTCTGATGCTC | + |
|
Preference number: 3 (lower is better) Translates to: AALQSGTTSGAL*YSNPAQAFLML Trigger: GAGCATCAGAAAGGCCTGAGCAGGGTTTGAATACCAGAGTGCCCCTGATGTAGTGCCACTCTGCAATGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR CCA 72 bp | GAAAGGCAGCATCCCCGTCAACCTCCAACAGCAACGTaGGTGTCCATAGCCACAGCAACACTCTTTCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: ERQHPRQPPTAT*VSIATATLFLP Trigger: AGGAAGAAAGAGTGTTGCTGTGGCTATGGACACCCACGTTGCTGTTGGAGGTTGACGGGGATGCTGCCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR GCA 72 bp | CCAGGGCTCTCTTCCTCTCCTGTCGCTGCAGAGTGCTaGCACCAACTTCGAAGACTACTCATTCATATTCTC | + |
|
Preference number: 3 (lower is better) Translates to: PGLSSSPVAAEC*HQLRRLLIHIL Trigger: GAGAATATGAATGAGTAGTCTTCGAAGTTGGTGGCAGCACTCTGCAGCGACAGGAGAGGAAGAGAGCCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR GCA 72 bp | TGCTGGCCCTGCTGGCCTTTAGAACGATTTGAAAGCTaGTGTTTTGGAGGATGCAGGCAAGGTCCAGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: CWPCWPLERFES*CFGGCRQGPGE Trigger: TTCTCCTGGACCTTGCCTGCATCCTCCAAAACAGCAGCTTTCAAATCGTTCTAAAGGCCAGCAGGGCCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR GCA 72 bp | GGTACAGCAGTAGGTGGTGCTCAGAACCAGCTATTCTaGACAGCCGGATTCAGTGATTCTGTCTCTGGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: GTAVGGAQNQLF*TAGFSDSVSGD Trigger: ATCCCCAGAGACAGAATCACTGAATCCGGCTGTGCAGAATAGCTGGTTCTGAGCACCACCTACTGCTGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR CCA 72 bp | GCCTCATTCTTCCACTCTGAGTCACTGGGAATGCCCTaGAGATTTTCGGCTGCATTGCAGAGTGGCACTACA | + |
|
Preference number: 3 (lower is better) Translates to: ASFFHSESLGMP*RFSAALQSGTT Trigger: TGTAGTGCCACTCTGCAATGCAGCCGAAAATCTCCAGGGCATTCCCAGTGACTCAGAGTGGAAGAATGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR TCA 72 bp | TTAAGCAGCAGGGCAATTCTGCCAGCCATCTCACAGTaGTTACATAACGTGGGGGCATCGGTCTCCCTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LSSRAILPAISQ*LHNVGASVSLN Trigger: ATTCAGGGAGACCGATGCCCCCACGTTATGTAATCACTGTGAGATGGCTGGCAGAATTGCCCTGCTGCTTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR GCA 72 bp | GAACCAGGGCTCTCTTCCTCTCCTGTCGCTGCAGAGTaGTGCCACCAACTTCGAAGACTACTCATTCATATT | + |
|
Preference number: 3 (lower is better) Translates to: EPGLSSSPVAAE*CHQLRRLLIHI Trigger: AATATGAATGAGTAGTCTTCGAAGTTGGTGGCAGCACTCTGCAGCGACAGGAGAGGAAGAGAGCCCTGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR CCA 72 bp | AGTAGAGAGGCACTATGTCCCAACCACGCCAGAATCTaGCGAACTGTAAATGCCAGTCTTACCCTCAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SREALCPNHARI*RTVNASLTLSS Trigger: AGAGCTGAGGGTAAGACTGGCATTTACAGTTCGCCAGATTCTGGCGTGGTTGGGACATAGTGCCTCTCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAAACTGGAGCATGCATGTGGTCCCTGACACTTGTGGGGTATCAGCCGGGAGCAGGTCTCTGCTAACCTaGAGGAAAATTAGCCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: KNWSMHVVPDTCGVSAGSRSLLT*RKISLQ Trigger: TTGAAGGCTAATTTTCCTCAAGGTTAGCAGAGACCT...GCTCCCGGCTGATACCCCACAAGTGTCAGGGACCACATGCATGCTCCAGTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR GCA 72 bp | GCCATGCACATAGTAGGCACTTGCAAACAGATTCCGTaGCCATCCAGTTCCCCACTTCAAGATCTCATGAGT | + |
|
Preference number: 3 (lower is better) Translates to: AMHIVGTCKQIP*PSSSPLQDLMS Trigger: ACTCATGAGATCTTGAAGTGGGGAACTGGATGGGCACGGAATCTGTTTGCAAGTGCCTACTATGTGCATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR GCA 72 bp | ATCAATCAATCAAGCTGGTCACTTGGACCAGCTTGCTaGCACCATGGCTATGCCTGTACTCTCCATAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: INQSSWSLGPAC*HHGYACTLHKE Trigger: TTCCTTATGGAGAGTACAGGCATAGCCATGGTGGCAGCAAGCTGGTCCAAGTGACCAGCTTGATTGATTGAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR GCA 72 bp | CTTACCCTCAGCTCTTGTTTTCGACACAAACTTTCTTaGCCCAGTAGCTACCCTCTACTTCCATGTCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LTLSSCFRHKLS*PSSYPLLPCLP Trigger: AGGCAGACATGGAAGTAGAGGGTAGCTACTGGGGCAAGAAAGTTTGTGTCGAAAACAAGAGCTGAGGGTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR GCA 72 bp | ATGTCCCAACCACGCCAGAATCTGGCGAACTGTAAATaGCAGTCTTACCCTCAGCTCTTGTTTTCGACACAA | + |
|
Preference number: 3 (lower is better) Translates to: MSQPRQNLANCK*QSYPQLLFSTQ Trigger: TTGTGTCGAAAACAAGAGCTGAGGGTAAGACTGGCATTTACAGTTCGCCAGATTCTGGCGTGGTTGGGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR-3UTR CAA 90 bp | CCATGCCTCATCATTGAACATATGAAAGGCAGCATCCCCGTCAACCTCCAACAGCGGTTTCCCCAAGAGTaGAAAACATGCTTTGTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: PCLIIEHMKGSIPVNLQQRFPQE*KTCFVK Trigger: CTTTACAAAGCATGTTTTCAACTCTTGGGGAAACCG...CTGTTGGAGGTTGACGGGGATGCTGCCTTTCATATGTTCAATGATGAGGCATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR TCA 72 bp | CAGGTCTTCGTGCATGCTAAGCACAGATTCTACTACTaGGCCACAGCCCAAGCACAATGGATTTCTTTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: QVFVHAKHRFYY*ATAQAQWISFV Trigger: CACAAAAGAAATCCATTGTGCTTGGGCTGTGGCTCAGTAGTAGAATCTGTGCTTAGCATGCACGAAGACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR TCA 72 bp | ATATTGTGTGGACAGAACACAGGAACACCGAGGAGCTaGGCAATGCACTTGCCATGCCTCATCATTGAACAT | + |
|
Preference number: 3 (lower is better) Translates to: ILCGQNTGTPRS*AMHLPCLIIEH Trigger: ATGTTCAATGATGAGGCATGGCAAGTGCATTGCTCAGCTCCTCGGTGTTCCTGTGTTCTGTCCACACAATAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR GCA 72 bp | GTGGGGCACTCGAAGAAGTTCTTCAAAGATCTTGTATaGGTGAGCACAGGGCAGTTACAACACATACACAGT | + |
|
Preference number: 3 (lower is better) Translates to: VGHSKKFFKDLV*VSTGQLQHIHS Trigger: ACTGTGTATGTGTTGTAACTGCCCTGTGCTCACGCATACAAGATCTTTGAAGAACTTCTTCGAGTGCCCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR GCA 72 bp | CTTTTCCTCTTCTTTAAAAGGTACAGCAGTAGGTGGTaGTCAGAACCAGCTATTCTGCACAGCCGGATTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LFLFFKRYSSRW*SEPAILHSRIQ Trigger: CTGAATCCGGCTGTGCAGAATAGCTGGTTCTGAGCACCACCTACTGCTGTACCTTTTAAAGAAGAGGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR CCA 72 bp | AAGACTACTCATTCATATTCTCTAAGTCATGAGGTGTaGCAGTGGCAGGGACTCCTGTCAGCTCTTCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: KTTHSYSLSHEV*QWQGLLSALLC Trigger: ACACAGAAGAGCTGACAGGAGTCCCTGCCACTGCCACACCTCATGACTTAGAGAATATGAATGAGTAGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR-3UTR CAA 90 bp | AATCCATGCAGGCACATTTATATCACATACACTATGGCTCAACACAAGCATATAGTCACTTGGACCAGCTaGCTGCCACCATGGCTATGC | + |
|
Preference number: 3 (lower is better) Translates to: NPCRHIYITYTMAQHKHIVTWTS*LPPWLC Trigger: GCATAGCCATGGTGGCAGCAAGCTGGTCCAAGTGAC...TATATGCTTGTGTTGAGCCATAGTGTATGTGATATAAATGTGCCTGCATGGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTCTCGGCCCTAATCCTTCTCAGAAATGTGGCTGTTTCATCTGTTGGGTGCAACACCTCTAACACGTaGGGTCTTCAATACAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: KFSALILLRNVAVSSVGCNTSNT*GLQYRR Trigger: TCTTCTGTATTGAAGACCCAACGTGTTAGAGGTGTT...GCACCCAACAGATGAAACAGCCACATTTCTGAGAAGGATTAGGGCCGAGAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR CCA 72 bp | ATGCTTTTCCTCTTCTTTAAAAGGTACAGCAGTAGGTaGTGCTCAGAACCAGCTATTCTGCACAGCCGGATT | + |
|
Preference number: 3 (lower is better) Translates to: MLFLFFKRYSSR*CSEPAILHSRI Trigger: AATCCGGCTGTGCAGAATAGCTGGTTCTGAGCACCACCTACTGCTGTACCTTTTAAAGAAGAGGAAAAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR TCA 72 bp | GGCACTCGAAGAAGTTCTTCAAAGATCTTGTATGCGTaGGCACAGGGCAGTTACAACACATACACAGTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: GTRRSSSKILYA*AQGSYNTYTVK Trigger: CTTAACTGTGTATGTGTTGTAACTGCCCTGTGCTCACGCATACAAGATCTTTGAAGAACTTCTTCGAGTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR GCA 72 bp | TTTCTTGCCCCAGTAGCTACCCTCTACTTCCATGTCTaGCTTTCCCAAATGATATCAATCAATCAAGCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: FLAPVATLYFHV*LSQMISINQAG Trigger: ACCAGCTTGATTGATTGATATCATTTGGGAAAGGCAGACATGGAAGTAGAGGGTAGCTACTGGGGCAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR CCA 72 bp | CCGATGGAACATCTTTATTCCTACCTAATCAAGCTTTaGAATTCTGGCCCCTGTGTGATATTCTCTAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: PMEHLYSYLIKL*NSGPCVIFSSP Trigger: AGGGCTAGAGAATATCACACAGGGGCCAGAATTCCAAAGCTTGATTAGGTAGGAATAAAGATGTTCCATCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR-3UTR CAA 90 bp | AATCCATGCAGGCACATTTATATCACATACACTATGGCTCAACACAAGCATATAGCACATAGTAGGCACTaGCAAACAGATTCCGTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: NPCRHIYITYTMAQHKHIAHSRH*QTDSVP Trigger: GGGCACGGAATCTGTTTGCAAGTGCCTACTATGTGC...TATATGCTTGTGTTGAGCCATAGTGTATGTGATATAAATGTGCCTGCATGGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR TCA 72 bp | TTTAAATCAGCCACCAGTTCAGAAAAGCACATAGAATaGAATGTGGAGTCTCGGGGTTTCACATTGAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: FKSATSSEKHIE*NVESRGFTLSR Trigger: CCTGCTCAATGTGAAACCCCGAGACTCCACATTTCATTCTATGTGCTTTTCTGAACTGGTGGCTGATTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR TCA 72 bp | TTCCGTGCCCATCCAGTTCCCCACTTCAAGATCTCATaGGTCTTTGCTACTTCTAATCTAACCTATGTATTT | + |
|
Preference number: 3 (lower is better) Translates to: FRAHPVPHFKIS*VFATSNLTYVF Trigger: AAATACATAGGTTAGATTAGAAGTAGCAAAGACTCATGAGATCTTGAAGTGGGGAACTGGATGGGCACGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR CCA 72 bp | GTGAGGGCAGGTAAATCCATAACACCTCTAACACGTTaGGTCTTCAATACAGAAGAACAAAAGGCAAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: VRAGKSITPLTR*VFNTEEQKAKT Trigger: AGTTTTTGCCTTTTGTTCTTCTGTATTGAAGACCCAACGTGTTAGAGGTGTTATGGATTTACCTGCCCTCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR TCA 72 bp | TGTCCCAACTCCCAGCATTTGCTAAACTTCTGCATATaGCTCCTCTCATCAGAATCAAGTTTAACTGATCAA | + |
|
Preference number: 3 (lower is better) Translates to: CPNSQHLLNFCI*LLSSESSLTDQ Trigger: TTGATCAGTTAAACTTGATTCTGATGAGAGGAGTCATATGCAGAAGTTTAGCAAATGCTGGGAGTTGGGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR-3UTR CAA 90 bp | AATCCATGCAGGCACATTTATATCACATACACTATGGCTCAACACAAGCATATAAGGTCTCTGCTAACCTaGAGGAAAATTAGCCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: NPCRHIYITYTMAQHKHIRSLLT*RKISLQ Trigger: TTGAAGGCTAATTTTCCTCAAGGTTAGCAGAGACCT...TATATGCTTGTGTTGAGCCATAGTGTATGTGATATAAATGTGCCTGCATGGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAATCCATGCAGGCACATTTATATCACATACACTATGGCTCAACACAAGCATAGTTTCAAGGGAAAGTTaGCTTGCTTCCAAAACTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LIHAGTFISHTLWLNTSIVSRES*LASKTP Trigger: AGGAGTTTTGGAAGCAAGCAAACTTTCCCTTGAAAC...TATGCTTGTGTTGAGCCATAGTGTATGTGATATAAATGTGCCTGCATGGATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| CDS-3UTR GCA 90 bp | AAAAACTGGAGCATGCATGTGGTCCCTGACACTTGTGGGGTATCAGCCGGGAGCGGAATGAGCCTCTTCTaGAGGACGGCGTCCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KNWSMHVVPDTCGVSAGSGMSLF*RTASQF Trigger: GAACTGGGACGCCGTCCTGCAGAAGAGGCTCATTCC...GCTCCCGGCTGATACCCCACAAGTGTCAGGGACCACATGCATGCTCCAGTTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| CDS-3UTR GCA 90 bp | GAGACCTGCTGGCCCTGCTGGCCTTTAGAACGATTTGAAAGCTGCTGTTTTGGAGGGTGCTCCAGGCCCTaGATGATCTGGAGTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ETCWPCWPLERFESCCFGGCSRP*MIWSSL Trigger: CAAGGAACTCCAGATCATGCAGGGCCTGGAGCACCC...TCCAAAACAGCAGCTTTCAAATCGTTCTAAAGGCCAGCAGGGCCAGCAGGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| CDS-3UTR GCA 90 bp | GAGACCTGCTGGCCCTGCTGGCCTTTAGAACGATTTGAAAGCTGCTGTTTTGGAGGAATGAGCCTCTTCTaGAGGACGGCGTCCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ETCWPCWPLERFESCCFGGMSLF*RTASQF Trigger: GAACTGGGACGCCGTCCTGCAGAAGAGGCTCATTCC...TCCAAAACAGCAGCTTTCAAATCGTTCTAAAGGCCAGCAGGGCCAGCAGGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| CDS-3UTR CCA 90 bp | AAAAACTGGAGCATGCATGTGGTCCCTGACACTTGTGGGGTATCAGCCGGGAGCGGTCGGAATGAAGCCTaGAATGAGCCTCTTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KNWSMHVVPDTCGVSAGSGRNEA*NEPLLQ Trigger: CTGCAGAAGAGGCTCATTCCAGGCTTCATTCCGACC...GCTCCCGGCTGATACCCCACAAGTGTCAGGGACCACATGCATGCTCCAGTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR CAA 72 bp | CAAGAGAGCGTGAGAGGCCATGCACATAGTAGGCACTaGCAAACAGATTCCGTGCCCATCCAGTTCCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: QESVRGHAHSRH*QTDSVPIQFPT Trigger: AGTGGGGAACTGGATGGGCACGGAATCTGTTTGCAAGTGCCTACTATGTGCATGGCCTCTCACGCTCTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| CDS-3UTR TCA 90 bp | TGTCTCTGGGGATGCTGGGGATCTACCCAGGTCTTCGTGCATGCTAAGCACAGAGGTTTCATATCCCTGTaGATGATGCGCTGGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CLWGCWGSTQVFVHAKHRGFISL*MMRWLC Trigger: ACAGAGCCAGCGCATCATTCACAGGGATATGAAACC...TCTGTGCTTAGCATGCACGAAGACCTGGGTAGATCCCCAGCATCCCCAGAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTCTGGGGATGCTGGGGATCTACCCAGGTCTTCGTGCATGCTAAGCACAGATTCACTGTGTCCTCCTaGAAGTGGACATTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CLWGCWGSTQVFVHAKHRFTVSS*KWTFCC Trigger: GCAGCAGAATGTCCACTTCCAGGAGGACACAGTGAA...TCTGTGCTTAGCATGCACGAAGACCTGGGTAGATCCCCAGCATCCCCAGAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| CDS-3UTR GCA 90 bp | AAGTTCTCGGCCCTAATCCTTCTCAGAAATGTGGCTGTTTCATCTGTTGGGTGCGGGTGCTCCAGGCCCTaGATGATCTGGAGTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KFSALILLRNVAVSSVGCGCSRP*MIWSSL Trigger: CAAGGAACTCCAGATCATGCAGGGCCTGGAGCACCC...GCACCCAACAGATGAAACAGCCACATTTCTGAGAAGGATTAGGGCCGAGAACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| CDS-3UTR GCA 90 bp | TATTGTGTGGACAGAACACAGGAACACCGAGGAGCTGAGCAATGCACTTGCCATTTCACCAGGAAAGGGTaGTCCAGGCCCTGCATGATC | + |
|
Preference number: 4 (lower is better) Translates to: YCVDRTQEHRGAEQCTCHFTRKG*SRPCMI Trigger: GATCATGCAGGGCCTGGAGCACCCTTTCCTGGTGAA...ATGGCAAGTGCATTGCTCAGCTCCTCGGTGTTCCTGTGTTCTGTCCACACAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| CDS-3UTR GCA 90 bp | CCATGCCTCATCATTGAACATATGAAAGGCAGCATCCCCGTCAACCTCCAACAGTTCACCAGGAAAGGGTaGTCCAGGCCCTGCATGATC | + |
|
Preference number: 4 (lower is better) Translates to: PCLIIEHMKGSIPVNLQQFTRKG*SRPCMI Trigger: GATCATGCAGGGCCTGGAGCACCCTTTCCTGGTGAA...CTGTTGGAGGTTGACGGGGATGCTGCCTTTCATATGTTCAATGATGAGGCATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| CDS-3UTR GCA 90 bp | GGTGTGCCTGTCATTGACCCACCTCCCACCCTGCACTTTCACCAGCATATCCCCTCTGTGATGTGCACATaGCCATGTTCATCAAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: GVPVIDPPPTLHFHQHIPSVMCT*PCSSSK Trigger: TTTACTTGATGAACATGGGCATGTGCACATCACAGA...GGGGATATGCTGGTGAAAGTGCAGGGTGGGAGGTGGGTCAATGACAGGCACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045477.6 |
||
| CDS-3UTR GCA 90 bp | TGTCTCTGGGGATGCTGGGGATCTACCCAGGTCTTCGTGCATGCTAAGCACAGATTGAAGTCTGTGATGTaGACATGCCCATGTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: CLWGCWGSTQVFVHAKHRLKSVM*TCPCSS Trigger: TGATGAACATGGGCATGTGCACATCACAGACTTCAA...TCTGTGCTTAGCATGCACGAAGACCTGGGTAGATCCCCAGCATCCCCAGAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045477.6 |
||
| CDS-3UTR CCA 90 bp | GGGGCACTCGAAGAAGTTCTTCAAAGATCTTGTATGCGTGAGCACAGGGCAGTTTTCACTGTGTCCTCCTaGAAGTGGACATTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GALEEVLQRSCMREHRAVFTVSS*KWTFCC Trigger: GCAGCAGAATGTCCACTTCCAGGAGGACACAGTGAA...AACTGCCCTGTGCTCACGCATACAAGATCTTTGAAGAACTTCTTCGAGTGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| CDS-3UTR CCA 90 bp | AAAAACTGGAGCATGCATGTGGTCCCTGACACTTGTGGGGTATCAGCCGGGAGCCGCAAAATTTCAAAGTaGTCAAAGTTGACGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KNWSMHVVPDTCGVSAGSRKISK*SKLTSS Trigger: TGAAGACGTCAACTTTGACCACTTTGAAATTTTGCG...GCTCCCGGCTGATACCCCACAAGTGTCAGGGACCACATGCATGCTCCAGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| CDS-3UTR CCA 90 bp | ATGACCTCAGCCTACACCAGGGCTGCAGTAGTGTCATTGGCTCTTAGCAGGACAAACTTCCCTTCCCAATaGCTCGCAAAATTTCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: MTSAYTRAAVVSLALSRTNFPSQ*LAKFQS Trigger: ACTTTGAAATTTTGCGAGCCATTGGGAAGGGAAGTT...TGTCCTGCTAAGAGCCAATGACACTACTGCAGCCCTGGTGTAGGCTGAGGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| CDS-3UTR CCA 90 bp | CTACCTGTAGTTCAGGAGTACTCTCTGATCCTCTGGAGAAGCAGGTCTCTGCTATATAGGTTGTTATTCTaGCCGTCCTCCTCCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPVVQEYSLILWRSRSLLYRLLF*PSSSSS Trigger: AGAAGAGGAGGAGGACGGCCAGAATAACAACCTATA...TAGCAGAGACCTGCTTCTCCAGAGGATCAGAGAGTACTCCTGAACTACAGGTAG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| CDS-3UTR GCA 90 bp | ATGACCTCAGCCTACACCAGGGCTGCAGTAGTGTCATTGGCTCTTAGCAGGACAAGGGTAAGTTACAATTaGTGTCTCAAACATGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: MTSAYTRAAVVSLALSRTRVSYN*CLKHVH Trigger: GTGAACATGTTTGAGACAGCAATTGTAACTTACCCT...TGTCCTGCTAAGAGCCAATGACACTACTGCAGCCCTGGTGTAGGCTGAGGTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| CDS-3UTR CCA 90 bp | GGTGCTCAGAACCAGCTATTCTGCACAGCCGGATTCAGTGATTCTGTCTCTGGGCGCAAAATTTCAAAGTaGTCAAAGTTGACGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GAQNQLFCTAGFSDSVSGRKISK*SKLTSS Trigger: TGAAGACGTCAACTTTGACCACTTTGAAATTTTGCG...CCCAGAGACAGAATCACTGAATCCGGCTGTGCAGAATAGCTGGTTCTGAGCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| 3UTR CAA 72 bp | CTTTCCCAAATGATATCAATCAATCAAGCTGGTCACTaGGACCAGCTTGCTGCCACCATGGCTATGCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSQMISINQAGH*DQLAATMAMPV Trigger: TACAGGCATAGCCATGGTGGCAGCAAGCTGGTCCAAGTGACCAGCTTGATTGATTGATATCATTTGGGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| CDS-3UTR TCA 90 bp | ACATACACAGTTAAGGTGACTGACACTCTGCACATGAGTGAAATACACAGACAAGGTTTCATATCCCTGTaGATGATGCGCTGGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TYTVKVTDTLHMSEIHRQGFISL*MMRWLC Trigger: ACAGAGCCAGCGCATCATTCACAGGGATATGAAACC...TTGTCTGTGTATTTCACTCATGTGCAGAGTGTCAGTCACCTTAACTGTGTATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| CDS-3UTR CCA 90 bp | ATTCACTTAAGGTCACAGAGTCAATGCGTGCTGAAGCTGGAACTGAAGAGCTCAAACTTCCCTTCCCAATaGCTCGCAAAATTTCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: IHLRSQSQCVLKLELKSSNFPSQ*LAKFQS Trigger: ACTTTGAAATTTTGCGAGCCATTGGGAAGGGAAGTT...TGAGCTCTTCAGTTCCAGCTTCAGCACGCATTGACTCTGTGACCTTAAGTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| CDS-3UTR CCA 90 bp | TTAATCCATGCAGGCACATTTATATCACATACACTATGGCTCAACACAAGCATAGGTCGGAATGAAGCCTaGAATGAGCCTCTTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LIHAGTFISHTLWLNTSIGRNEA*NEPLLQ Trigger: CTGCAGAAGAGGCTCATTCCAGGCTTCATTCCGACC...TATGCTTGTGTTGAGCCATAGTGTATGTGATATAAATGTGCCTGCATGGATTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| CDS-3UTR CCA 90 bp | CTTCCAAGCGGTGAACTAAAACAGAGGAAGCAGTTAAATGATTCACTTAAGGTCTATAGGTTGTTATTCTaGCCGTCCTCCTCCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPSGELKQRKQLNDSLKVYRLLF*PSSSSS Trigger: AGAAGAGGAGGAGGACGGCCAGAATAACAACCTATA...GACCTTAAGTGAATCATTTAACTGCTTCCTCTGTTTTAGTTCACCGCTTGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| CDS-3UTR CCA 90 bp | AATCCATGCAGGCACATTTATATCACATACACTATGGCTCAACACAAGCATATAAGGCCCTGCATGATCTaGAGTTCCTTGAAGACATTC | + |
|
Preference number: 4 (lower is better) Translates to: NPCRHIYITYTMAQHKHIRPCMI*SSLKTF Trigger: GAATGTCTTCAAGGAACTCCAGATCATGCAGGGCCT...TATATGCTTGTGTTGAGCCATAGTGTATGTGATATAAATGTGCCTGCATGGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| CDS-3UTR GCA 90 bp | ACATACACAGTTAAGGTGACTGACACTCTGCACATGAGTGAAATACACAGACAAAGGGTAAGTTACAATTaGTGTCTCAAACATGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TYTVKVTDTLHMSEIHRQRVSYN*CLKHVH Trigger: GTGAACATGTTTGAGACAGCAATTGTAACTTACCCT...TTGTCTGTGTATTTCACTCATGTGCAGAGTGTCAGTCACCTTAACTGTGTATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| CDS GCA 90 bp | AGCAAAGGAGTAGCCTGTTTCCTTCCTAGACGTGAACATCTCCGGTaGCATGTAAGGCTTGGTGCCAGCTACGGTGGTGATCCGGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SKGVACFLPRREHLR*HVRLGASYGGDPGL Trigger: GAGACCCGGATCACCACCGTAGCTGGCACCAAGCCTTACATGGCACCGGAGATGTTCACGTCTAGGAAGGAAACAGGCTACTCCTTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045477.6 |
||
| CDS CCA 90 bp | AAAAGTGGGGTCACAATTGAGCCTGCCTTTGGTCGGAATGAAGCCTaGAATGAGCCTCTTCTGCAGGACGGCGTCCCAGTTCATGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: KSGVTIEPAFGRNEA*NEPLLQDGVPVHVT Trigger: AGTGACATGAACTGGGACGCCGTCCTGCAGAAGAGGCTCATTCCAGGCTTCATTCCGACCAAAGGCAGGCTCAATTGTGACCCCACTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| CDS-3UTR CAA 90 bp | CCATGCCTCATCATTGAACATATGAAAGGCAGCATCCCCGTCAACCTCCAACAGCAATTGAGCCTGCCTTaGGTCGGAATGAAGCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PCLIIEHMKGSIPVNLQQQLSLP*VGMKPG Trigger: TCCAGGCTTCATTCCGACCAAAGGCAGGCTCAATTG...CTGTTGGAGGTTGACGGGGATGCTGCCTTTCATATGTTCAATGATGAGGCATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGGTGGGGCCAGGTGAGGGCAGGTAAATCCATAACACCTCTAACACGTTGGATGATCTGGAGTTCCTaGAAGACATTCCTCACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RRWGQVRAGKSITPLTRWMIWSS*KTFLTS Trigger: TGAAGTGAGGAATGTCTTCAAGGAACTCCAGATCAT...CCAACGTGTTAGAGGTGTTATGGATTTACCTGCCCTCACCTGGCCCCACCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| CDS-3UTR CAA 90 bp | CCATGCCTCATCATTGAACATATGAAAGGCAGCATCCCCGTCAACCTCCAACAGAGCATGGCAGCAATGTaGAAGTCTGTGATGTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PCLIIEHMKGSIPVNLQQSMAAM*KSVMCT Trigger: TGTGCACATCACAGACTTCAACATTGCTGCCATGCT...CTGTTGGAGGTTGACGGGGATGCTGCCTTTCATATGTTCAATGATGAGGCATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045477.6 |
||
| CDS-3UTR CAA 90 bp | ATGACCTCAGCCTACACCAGGGCTGCAGTAGTGTCATTGGCTCTTAGCAGGACATCTTCTGTGTTGTTTTaGGTTTGTTCCAAGGCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: MTSAYTRAAVVSLALSRTSSVLF*VCSKAR Trigger: TCTAGCCTTGGAACAAACCAAAAACAACACAGAAGA...TGTCCTGCTAAGAGCCAATGACACTACTGCAGCCCTGGTGTAGGCTGAGGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| CDS-3UTR CAA 90 bp | TATTGTGTGGACAGAACACAGGAACACCGAGGAGCTGAGCAATGCACTTGCCATTCTTCTGTGTTGTTTTaGGTTTGTTCCAAGGCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: YCVDRTQEHRGAEQCTCHSSVLF*VCSKAR Trigger: TCTAGCCTTGGAACAAACCAAAAACAACACAGAAGA...ATGGCAAGTGCATTGCTCAGCTCCTCGGTGTTCCTGTGTTCTGTCCACACAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
||
| CDS-3UTR CAA 90 bp | CTTCCAAGCGGTGAACTAAAACAGAGGAAGCAGTTAAATGATTCACTTAAGGTCATGATCTGGAGTTCCTaGAAGACATTCCTCACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LPSGELKQRKQLNDSLKVMIWSS*KTFLTS Trigger: TGAAGTGAGGAATGTCTTCAAGGAACTCCAGATCAT...GACCTTAAGTGAATCATTTAACTGCTTCCTCTGTTTTAGTTCACCGCTTGGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| CDS-3UTR CAA 90 bp | AATCCATGCAGGCACATTTATATCACATACACTATGGCTCAACACAAGCATATACAAGTGAGAAAAGCGTaGGTCTGGATTAGGTTCAAG | + |
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Preference number: 5 (lower is better) Translates to: NPCRHIYITYTMAQHKHIQVRKA*VWIRFK Trigger: CTTGAACCTAATCCAGACCAACGCTTTTCTCACTTG...TATATGCTTGTGTTGAGCCATAGTGTATGTGATATAAATGTGCCTGCATGGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| CDS TCA 72 bp | AGGGAAGCGAAGCAGCCATGGCTTTACTCCTGTGAATaGTGCGCTGGCTCTGTAGGTAGTCCAGGGCCATGG | + |
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Preference number: 6 (lower is better) Translates to: REAKQPWLYSCE*CAGSVGSPGPW Trigger: CCATGGCCCTGGACTACCTACAGAGCCAGCGCATCATTCACAGGAGTAAAGCCATGGCTGCTTCGCTTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236899.2 |
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| CDS GCA 72 bp | GTAGCCTGTTTCCTTCCTAGACGTGAACATCTCCGGTaGCATGTAAGGCTTGGTGCCAGCTACGGTGGTGAT | + |
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Preference number: 6 (lower is better) Translates to: VACFLPRREHLR*HVRLGASYGGD Trigger: ATCACCACCGTAGCTGGCACCAAGCCTTACATGGCACCGGAGATGTTCACGTCTAGGAAGGAAACAGGCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045477.6 |
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| CDS CAA 90 bp | ATCATTTCTTCCAGTTCAAAAGTGGGGTCACAATTGAGCCTGCCTTaGGTCGGAATGAAGCCTGGAATGAGCCTCTTCTGCAGGACGGCG | + |
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Preference number: 6 (lower is better) Translates to: IISSSSKVGSQLSLP*VGMKPGMSLFCRTA Trigger: CGCCGTCCTGCAGAAGAGGCTCATTCCAGGCTTCATTCCGACCAAAGGCAGGCTCAATTGTGACCCCACTTTTGAACTGGAAGAAATGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| CDS CAA 72 bp | TCCAGTTCAAAAGTGGGGTCACAATTGAGCCTGCCTTaGGTCGGAATGAAGCCTGGAATGAGCCTCTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: SSSKVGSQLSLP*VGMKPGMSLFC Trigger: GCAGAAGAGGCTCATTCCAGGCTTCATTCCGACCAAAGGCAGGCTCAATTGTGACCCCACTTTTGAACTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| CDS CAA 90 bp | GCTACGGTGGTGATCCGGGTCTCCTTGGGCAGCATGGCAGCAATGTaGAAGTCTGTGATGTGCACATGCCCATGTTCATCAAGTAAAATA | + |
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Preference number: 6 (lower is better) Translates to: ATVVIRVSLGSMAAM*KSVMCTCPCSSSKI Trigger: TATTTTACTTGATGAACATGGGCATGTGCACATCACAGACTTCAACATTGCTGCCATGCTGCCCAAGGAGACCCGGATCACCACCGTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045477.6 |
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| CDS CAA 90 bp | ACTCATGTAAGGGAAATTCTGAATGTCAGTCAAGTGAGAAAAGCGTaGGTCTGGATTAGGTTCAAGCAGCTTTTTAAGAAGGGATACCAT | + |
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Preference number: 6 (lower is better) Translates to: THVREILNVSQVRKA*VWIRFKQLFKKGYH Trigger: ATGGTATCCCTTCTTAAAAAGCTGCTTGAACCTAATCCAGACCAACGCTTTTCTCACTTGACTGACATTCAGAATTTCCCTTACATGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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| CDS CAA 72 bp | AGGGAAATTCTGAATGTCAGTCAAGTGAGAAAAGCGTaGGTCTGGATTAGGTTCAAGCAGCTTTTTAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: REILNVSQVRKA*VWIRFKQLFKK Trigger: CTTCTTAAAAAGCTGCTTGAACCTAATCCAGACCAACGCTTTTCTCACTTGACTGACATTCAGAATTTCCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045477.6 ENSMUST00000237797.2 |
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