Pregenerated sensors for STK31 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023403Ensembl transcript IDs: ENSMUST00000024171.14, ENSMUST00000163954.8, ENSMUST00000167846.2, ENSMUST00000172459.8
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAACAGAACAAGCCCCTTTGGCCTGCTaGAGGTTGACTGGTTTGATC | + |
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Preference number: 4 (lower is better) Translates to: RCNPTSSRTFLSTKQTEQAPLAC*RLTGLI Trigger: GATCAAACCAGTCAACCTTCAGCAGGCCAAAGGGGC...TTGTTCTGTTTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR GCA 90 bp | AGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAACAGAACAAGCTGTTTTCTCTTGCTaGAGCTCCTGGGCAGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: RCNPTSSRTFLSTKQTEQAVFSC*SSWAVC Trigger: GCAGACTGCCCAGGAGCTGCAGCAAGAGAAAACAGC...TTGTTCTGTTTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR CCA 90 bp | CAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAACTGCTGAAGGTTGACTaGTTTGATCTGCGCCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: QIQRCNPTSSRTFLSTKQLLKVD*FDLRPH Trigger: GTGGGGGCGCAGATCAAACCAGTCAACCTTCAGCAG...TTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR TCA 90 bp | CAACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAAAGGCATACTGGCTTaGACTGCACTCAGGTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: QPKSKDAIQLVPEHFCLLKGILA*TALRFA Trigger: GGCAAACCTGAGTGCAGTTCAAGCCAGTATGCCTTT...TAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024171.14 ENSMUST00000167846.2 |
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| CDS-3UTR GCA 90 bp | CAACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTACCCCTATATCGACAGTaGCATACTCAGCCTGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QPKSKDAIQLVPEHFCLLPLYRQ*HTQPEQ Trigger: TTGCTCAGGCTGAGTATGGCACTGTCGATATAGGGG...TAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR GCA 90 bp | CAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAACAGAAAGCCTCCCGTTAAAATaGCCCTTTGGCCTGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QRCNPTSSRTFLSTKQTESLPLK*PFGLLK Trigger: CTTCAGCAGGCCAAAGGGGCATTTTAACGGGAGGCT...TTCTGTTTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR GCA 90 bp | CAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAACAGAAGTAGCTGTTTTCTCTTaGTGCAGCTCCTGGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QRCNPTSSRTFLSTKQTEVAVFS*CSSWAV Trigger: GACTGCCCAGGAGCTGCAGCAAGAGAAAACAGCTAC...TTCTGTTTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR GCA 90 bp | ACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCATGCCACAAGGTGCTaGAGAGATGCCTCTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TQIQRCNPTSSRTFLSTKHATRC*RDASVS Trigger: TGAAACAGAGGCATCTCTGCAGCACCTTGTGGCATG...CTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR GCA 90 bp | CAACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAGCACTATGCAATGTATaGAGTCCTCGGGCAACACCT | + |
|
Preference number: 4 (lower is better) Translates to: QPKSKDAIQLVPEHFCLLALCNV*SPRATP Trigger: AGGTGTTGCCCGAGGACTGCATACATTGCATAGTGC...TAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024171.14 ENSMUST00000167846.2 |
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| CDS-3UTR GCA 90 bp | TCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAACAGGCACTATGCAATGTATaGAGTCCTCGGGCAACACCT | + |
|
Preference number: 4 (lower is better) Translates to: SKDAIQLVPEHFCLLSKQALCNV*SPRATP Trigger: AGGTGTTGCCCGAGGACTGCATACATTGCATAGTGC...CTGTTTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024171.14 ENSMUST00000167846.2 |
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| CDS-3UTR CCA 90 bp | TCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAACAGTCTTGCTGCAGCTCCTaGGCAGTCTGCTCAACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SKDAIQLVPEHFCLLSKQSCCSS*AVCSTF Trigger: AAAAGTTGAGCAGACTGCCCAGGAGCTGCAGCAAGA...CTGTTTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR GCA 90 bp | CAACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTACAAAAACCTTCTGGCTaGTCTGGAACCATGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: QPKSKDAIQLVPEHFCLLQKPSG*SGTMPQ Trigger: TTGTGGCATGGTTCCAGAGCAGCCAGAAGGTTTTTG...TAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR GCA 90 bp | ACAACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTCATACTGGCTTGAACTaGACTCAGGTTTGCCTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TTQIQRCNPTSSRTFLSTHTGLN*TQVCLR Trigger: CCTAAGGCAAACCTGAGTGCAGTTCAAGCCAGTATG...AGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024171.14 ENSMUST00000167846.2 |
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| CDS-3UTR GCA 90 bp | TCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAACAGCATACTGGCTTGAACTaGACTCAGGTTTGCCTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKDAIQLVPEHFCLLSKQHTGLN*TQVCLR Trigger: CCTAAGGCAAACCTGAGTGCAGTTCAAGCCAGTATG...CTGTTTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024171.14 ENSMUST00000167846.2 |
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| CDS-3UTR CCA 90 bp | ACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGAGATCAAAAACCTTCTaGCTGCTCTGGAACCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: TQIQRCNPTSSRTFLSTKRSKTF*LLWNHA Trigger: GGCATGGTTCCAGAGCAGCCAGAAGGTTTTTGATCT...CTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR TCA 90 bp | CAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAGTGCCATACTCAGCCTaGGCAATAACTGTTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: QIQRCNPTSSRTFLSTKQVPYSA*AITVPS Trigger: AGATGGAACAGTTATTGCTCAGGCTGAGTATGGCAC...TTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR TCA 90 bp | ACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGACAGCAAGGTGGCAATaGACTTTTCCTCAGAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: TQIQRCNPTSSRTFLSTKTARWQ*TFPQNG Trigger: TCCATTCTGAGGAAAAGTTCATTGCCACCTTGCTGT...CTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR GCA 90 bp | ACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGTGCCTGAGGTCAGTCTaGACTTTTCTGCAAATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TQIQRCNPTSSRTFLSTKCLRSV*TFLQIL Trigger: AAGGATTTGCAGAAAAGTGCAGACTGACCTCAGGCA...CTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR GCA 90 bp | CAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAAGGATCAGGTTTCTTTaGCTCACAGGCATCAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: QIQRCNPTSSRTFLSTKQRIRFL*LTGINA Trigger: GGCATTGATGCCTGTGAGGCAAAGAAACCTGATCCT...TTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR GCA 90 bp | CAACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAGAAATGTCACGTGATTaGCTGCACTGGTCTCATACT | + |
|
Preference number: 4 (lower is better) Translates to: QPKSKDAIQLVPEHFCLLEMSRD*LHWSHT Trigger: AGTATGAGACCAGTGCAGGCAATCACGTGACATTTC...TAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR GCA 90 bp | CAACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAACAGCTCTAGCTCTTTaGAGACACATGACTCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QPKSKDAIQLVPEHFCLLTALAL*RHMTQS Trigger: AGACTGAGTCATGTGTCTGCAAAGAGCTAGAGCTGT...TAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR GCA 90 bp | CAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAACTCTCTGAATCACCCTaGCTTCTGTGTCAACATCCA | + |
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Preference number: 4 (lower is better) Translates to: QIQRCNPTSSRTFLSTKQLSESP*LLCQHP Trigger: TGGATGTTGACACAGAAGGCAGGGTGATTCAGAGAG...TTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024171.14 ENSMUST00000167846.2 |
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| CDS-3UTR GCA 90 bp | AGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAACAGAACAACTCTCTGAATCACCCTaGCTTCTGTGTCAACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: RCNPTSSRTFLSTKQTEQLSESP*LLCQHP Trigger: TGGATGTTGACACAGAAGGCAGGGTGATTCAGAGAG...TTGTTCTGTTTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024171.14 ENSMUST00000167846.2 |
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| CDS-3UTR CCA 90 bp | TCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAACAGCGTGATTGCCTGCACTaGTCTCATACTTCACATCAA | + |
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Preference number: 4 (lower is better) Translates to: SKDAIQLVPEHFCLLSKQRDCLH*SHTSHQ Trigger: TTGATGTGAAGTATGAGACCAGTGCAGGCAATCACG...CTGTTTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR CCA 90 bp | ACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCCAAATTCTTCAGCCTaGTTCCTACACACGTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: TQIQRCNPTSSRTFLSTKPNSSA*FLHTSS Trigger: TGAAGACGTGTGTAGGAACCAGGCTGAAGAATTTGG...CTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR CCA 90 bp | TCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAACAGTCAGGGAACCATTTCTaGGTCAAGCTATTCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SKDAIQLVPEHFCLLSKQSGNHF*VKLFSF Trigger: GAAGCTGAATAGCTTGACCCAGAAATGGTTCCCTGA...CTGTTTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024171.14 ENSMUST00000167846.2 |
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| CDS-3UTR TCA 90 bp | CAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAACACTTGCATAGCATCTaGAAGGTCATTTCCAAAGCG | + |
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Preference number: 4 (lower is better) Translates to: QIQRCNPTSSRTFLSTKQHLHSI*KVISKA Trigger: CGCTTTGGAAATGACCTTTCAGATGCTATGCAAGTG...TTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR TCA 90 bp | CAACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAGTTTGGATCTTCTCCTaGGCAACATTATATTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: QPKSKDAIQLVPEHFCLLVWIFS*ATLYSA Trigger: GGCTGAATATAATGTTGCTCAGGAGAAGATCCAAAC...TAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR TCA 90 bp | TCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAACAGGGCTCTCAGATTTGGTaGAGTCATAATCTCCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: SKDAIQLVPEHFCLLSKQGSQIW*SHNLQQ Trigger: TTGTTGGAGATTATGACTTCACCAAATCTGAGAGCC...CTGTTTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR TCA 90 bp | CAACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGTTTTCAATTCAGGTaGGAGCAAACTCAATCCACC | + |
|
Preference number: 4 (lower is better) Translates to: QPKSKDAIQLVPEHFCLLSFQFR*EQTQST Trigger: GGTGGATTGAGTTTGCTCTCACCTGAATTGAAAACT...TAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR TCA 90 bp | ACAACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTCAGACTCTCCATCTTTaGTTCATCTTCTCTGCTATG | + |
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Preference number: 4 (lower is better) Translates to: TTQIQRCNPTSSRTFLSTQTLHL*FIFSAM Trigger: CATAGCAGAGAAGATGAATCAAAGATGGAGAGTCTG...AGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024171.14 ENSMUST00000167846.2 |
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| CDS-3UTR TCA 90 bp | CAACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTACAGACTCTCCATCTTTaGTTCATCTTCTCTGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: QPKSKDAIQLVPEHFCLLQTLHL*FIFSAM Trigger: CATAGCAGAGAAGATGAATCAAAGATGGAGAGTCTG...TAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024171.14 ENSMUST00000167846.2 |
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| CDS-3UTR GCA 90 bp | ACAACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTGGCCCAAAATGTTACTaGATCTTCTACATGACTTCC | + |
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Preference number: 4 (lower is better) Translates to: TTQIQRCNPTSSRTFLSTGPKCY*IFYMTS Trigger: GGAAGTCATGTAGAAGATGCAGTAACATTTTGGGCC...AGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR CCA 90 bp | CAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAATCAGGGAACCATTTCTaGGTCAAGCTATTCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: QIQRCNPTSSRTFLSTKQSGNHF*VKLFSF Trigger: GAAGCTGAATAGCTTGACCCAGAAATGGTTCCCTGA...TTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024171.14 ENSMUST00000167846.2 |
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| CDS-3UTR CCA 90 bp | ACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGTGCCTTAGGATAATATaGGACCATCAGATAGGCAAC | + |
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Preference number: 4 (lower is better) Translates to: TQIQRCNPTSSRTFLSTKCLRII*DHQIGN Trigger: GTTGCCTATCTGATGGTCCCATATTATCCTAAGGCA...CTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024171.14 ENSMUST00000167846.2 |
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| CDS-3UTR CCA 90 bp | ACAACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGTTAAAGGCATACTaGCTTGAACTGCACTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TTQIQRCNPTSSRTFLSTKLKAY*LELHSG Trigger: ACCTGAGTGCAGTTCAAGCCAGTATGCCTTTAACTT...AGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024171.14 ENSMUST00000167846.2 |
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| CDS-3UTR CCA 90 bp | ACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGAAGTTAAAGGCATACTaGCTTGAACTGCACTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TQIQRCNPTSSRTFLSTKKLKAY*LELHSG Trigger: ACCTGAGTGCAGTTCAAGCCAGTATGCCTTTAACTT...CTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024171.14 ENSMUST00000167846.2 |
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| CDS-3UTR TCA 90 bp | ACAACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTACTGCATCTTCTACATaGCTTCCAACAACATCTTCA | + |
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Preference number: 4 (lower is better) Translates to: TTQIQRCNPTSSRTFLSTTASST*LPTTSS Trigger: TGAAGATGTTGTTGGAAGTCATGTAGAAGATGCAGT...AGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR TCA 90 bp | AGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAACAGAACAAACCAATCAGGTCTTCTaGAGTCAATGGTTCATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RCNPTSSRTFLSTKQTEQTNQVF*SQWFIQ Trigger: TTGGATGAACCATTGACTTCAGAAGACCTGATTGGT...TTGTTCTGTTTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR GCA 90 bp | TCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAACAGGTCCTGTTTAATTTTTaGCAAGCTGACATTAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: SKDAIQLVPEHFCLLSKQVLFNF*QADIRP Trigger: GGGTCTAATGTCAGCTTGGCAAAAATTAAACAGGAC...CTGTTTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR GCA 90 bp | AGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAACAGAACAACCTTCATCCAACACTTaGATAGCATCTGAAAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RCNPTSSRTFLSTKQTEQPSSNT*IASERS Trigger: TGACCTTTCAGATGCTATGCAAGTGTTGGATGAAGG...TTGTTCTGTTTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR GCA 90 bp | CAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAACAGAATTGTCTATGACACCTTaGTCAATGAGAGACAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QRCNPTSSRTFLSTKQTELSMTP*SMRDSS Trigger: AGAGCTGTCTCTCATTGAGCAAGGTGTCATAGACAA...TTCTGTTTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR CCA 90 bp | CAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAAACTGGGTAACTTCTTaGCCAGAAGGAATCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: QIQRCNPTSSRTFLSTKQNWVTS*PEGICS Trigger: ACTACAGATTCCTTCTGGCCAAGAAGTTACCCAGTT...TTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR CCA 90 bp | AGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAACAGAACAAAGCCAAACTTTCCTTTaGAAATGTCACGTGATTGCC | + |
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Preference number: 4 (lower is better) Translates to: RCNPTSSRTFLSTKQTEQSQTFL*KCHVIA Trigger: GGCAATCACGTGACATTTCCAAAGGAAAGTTTGGCT...TTGTTCTGTTTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
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| CDS-3UTR CCA 90 bp | CAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAACAGAATGCCTTAGGATAATATaGGACCATCAGATAGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QRCNPTSSRTFLSTKQTECLRII*DHQIGN Trigger: GTTGCCTATCTGATGGTCCCATATTATCCTAAGGCA...TTCTGTTTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024171.14 ENSMUST00000167846.2 |
||
| CDS-3UTR TCA 90 bp | CAACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTATATCCTTATTTTTACTaGCATTCTGGGCCCAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: QPKSKDAIQLVPEHFCLLYPYFY*HSGPKM Trigger: CATTTTGGGCCCAGAATGTCAGTAAAAATAAGGATA...TAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
||
| CDS-3UTR TCA 90 bp | CAACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAAGATTGCCAAAAACTaGATTAGCAAGAGGACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QPKSKDAIQLVPEHFCLLKIAKN*ISKRTN Trigger: GTTTGTCCTCTTGCTAATTCAGTTTTTGGCAATCTT...TAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
||
| CDS-3UTR TCA 90 bp | CAACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTATACAAAGGAGGGACTTaGCATTATCATCCAAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: QPKSKDAIQLVPEHFCLLYKGGT*HYHPNE Trigger: TTCATTTGGATGATAATGTCAAGTCCCTCCTTTGTA...TAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024171.14 ENSMUST00000167846.2 |
||
| CDS-3UTR TCA 90 bp | CAACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAAAGCTCAGATTTGGTaGAGTCATAATCTCCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: QPKSKDAIQLVPEHFCLLKAQIW*SHNLQQ Trigger: TTGTTGGAGATTATGACTTCACCAAATCTGAGCTTT...TAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167846.2 |
||
| CDS-3UTR GCA 90 bp | AGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAACAGAACAAATTATGTTAGCACTATaGAATGTATGCAGTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RCNPTSSRTFLSTKQTEQIMLAL*NVCSPR Trigger: CCGAGGACTGCATACATTGCATAGTGCTAACATAAT...TTGTTCTGTTTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024171.14 ENSMUST00000167846.2 |
||
| CDS-3UTR GCA 90 bp | CAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAATTATGTTAGCACTATaGAATGTATGCAGTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: QIQRCNPTSSRTFLSTKQIMLAL*NVCSPR Trigger: CCGAGGACTGCATACATTGCATAGTGCTAACATAAT...TTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024171.14 ENSMUST00000167846.2 |
||
| CDS-3UTR CCA 90 bp | ACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGTTTTTACTGACATTCTaGGCCCAAAATGTTACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TQIQRCNPTSSRTFLSTKFLLTF*AQNVTA Trigger: TGCAGTAACATTTTGGGCCCAGAATGTCAGTAAAAA...CTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
||
| CDS-3UTR TCA 90 bp | CAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAATACAAAGGAGGGACTTaGCATTATCATCCAAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: QIQRCNPTSSRTFLSTKQYKGGT*HYHPNE Trigger: TTCATTTGGATGATAATGTCAAGTCCCTCCTTTGTA...TTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024171.14 ENSMUST00000167846.2 |
||
| CDS-3UTR GCA 90 bp | CAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAAGAGTGCTTTCTAAATaGTTAGTCAGATCCATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QIQRCNPTSSRTFLSTKQRVLSK*LVRSMV Trigger: TACCATGGATCTGACTAAGCATTTAGAAAGCACTCT...TTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
||
| CDS-3UTR GCA 90 bp | CAACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAGAAGTTGCTAAGTCCTaGAATGTTTTTAAGCGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: QPKSKDAIQLVPEHFCLLEVAKS*NVFKRL Trigger: TAAACGCTTAAAAACATTGCAGGACTTAGCAACTTC...TAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
||
| CDS-3UTR CCA 90 bp | CAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAACAGAAGTATCTTCATCCATTTaGACAAGTCCTGGAAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: QRCNPTSSRTFLSTKQTEVSSSI*TSPGKL Trigger: AAGTTTTCCAGGACTTGTCCAAATGGATGAAGATAC...TTCTGTTTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
||
| CDS-3UTR CCA 90 bp | CAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAACAGAAATTTCAGTTCCATCATaGTCATCAGATTCTTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QRCNPTSSRTFLSTKQTEISVPS*SSDSSK Trigger: TTTGGAAGAATCTGATGACCATGATGGAACTGAAAT...TTCTGTTTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024171.14 ENSMUST00000167846.2 |
||
| CDS-3UTR CCA 90 bp | AGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAACAGAACAAATTTCAGTTCCATCATaGTCATCAGATTCTTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RCNPTSSRTFLSTKQTEQISVPS*SSDSSK Trigger: TTTGGAAGAATCTGATGACCATGATGGAACTGAAAT...TTGTTCTGTTTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024171.14 ENSMUST00000167846.2 |
||
| CDS GCA 90 bp | GCACTGGTCTCATACTTCACATCAAGAGTCAGCCTCCCGTTAAAATaGCCCTTTGGCCTGCTGAAGGTTGACTGGTTTGATCTGCGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ALVSYFTSRVSLPLK*PFGLLKVDWFDLRP Trigger: GGGGCGCAGATCAAACCAGTCAACCTTCAGCAGGCCAAAGGGGCATTTTAACGGGAGGCTGACTCTTGATGTGAAGTATGAGACCAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000172459.8 |
||
| CDS GCA 90 bp | GACAGATCAAAAACCTTCTGGCTGCTCTGGAACCATGCCACAAGGTaGTGCAGAGATGCCTCTGTTTCACTCCTAATACTGGCGAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: DRSKTFWLLWNHATR*CRDASVSLLILANS Trigger: AGAGTTCGCCAGTATTAGGAGTGAAACAGAGGCATCTCTGCAGCACCTTGTGGCATGGTTCCAGAGCAGCCAGAAGGTTTTTGATCTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000172459.8 |
||
| CDS CCA 90 bp | GTCAATGGTTCATCCAAGGACAGATCAAAAACCTTCTGGCTGCTCTaGAACCATGCCACAAGGTGCTGCAGAGATGCCTCTGTTTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: VNGSSKDRSKTFWLL*NHATRCCRDASVSL Trigger: GAGTGAAACAGAGGCATCTCTGCAGCACCTTGTGGCATGGTTCCAGAGCAGCCAGAAGGTTTTTGATCTGTCCTTGGATGAACCATTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000172459.8 |
||
| CDS CCA 90 bp | TCTTCTGAAGTCAATGGTTCATCCAAGGACAGATCAAAAACCTTCTaGCTGCTCTGGAACCATGCCACAAGGTGCTGCAGAGATGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSEVNGSSKDRSKTF*LLWNHATRCCRDAS Trigger: AGAGGCATCTCTGCAGCACCTTGTGGCATGGTTCCAGAGCAGCCAGAAGGTTTTTGATCTGTCCTTGGATGAACCATTGACTTCAGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000172459.8 |
||
| CDS GCA 90 bp | GTCACCAGCAGCCAAACTTTCCTTTGGAAATGTCACGTGATTGCCTaGACTGGTCTCATACTTCACATCAAGAGTCAGCCTCCCGTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: VTSSQTFLWKCHVIA*TGLILHIKSQPPVK Trigger: TTTAACGGGAGGCTGACTCTTGATGTGAAGTATGAGACCAGTGCAGGCAATCACGTGACATTTCCAAAGGAAAGTTTGGCTGCTGGTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000172459.8 |
||
| CDS GCA 90 bp | TTCATCCAAGGACAGATCAAAAACCTTCTGGCTGCTCTGGAACCATaGCACAAGGTGCTGCAGAGATGCCTCTGTTTCACTCCTAATACT | + |
|
Preference number: 5 (lower is better) Translates to: FIQGQIKNLLAALEP*HKVLQRCLCFTPNT Trigger: AGTATTAGGAGTGAAACAGAGGCATCTCTGCAGCACCTTGTGGCATGGTTCCAGAGCAGCCAGAAGGTTTTTGATCTGTCCTTGGATGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000172459.8 |
||
| CDS GCA 90 bp | CATATCCACAAGCTCTATGGTAAGAGGCTGCTCTCTGAATCACCCTaGCTTCTGTGTCAACATCCACGGAATAGCCCTTTAAGAGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: HIHKLYGKRLLSESP*LLCQHPRNSPLREL Trigger: CAGTTCTCTTAAAGGGCTATTCCGTGGATGTTGACACAGAAGGCAGGGTGATTCAGAGAGCAGCCTCTTACCATAGAGCTTGTGGATATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000167846.2 ENSMUST00000172459.8 |
||
| CDS GCA 90 bp | GATCAGGTTTCTTTGCCTCACAGGCATCAATGCCTGAGGTCAGTCTaGACTTTTCTGCAAATCCTTTCTTTGCCACTTCTTCCCCTATAT | + |
|
Preference number: 5 (lower is better) Translates to: DQVSLPHRHQCLRSV*TFLQILSLPLLPLY Trigger: ATATAGGGGAAGAAGTGGCAAAGAAAGGATTTGCAGAAAAGTGCAGACTGACCTCAGGCATTGATGCCTGTGAGGCAAAGAAACCTGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000172459.8 |
||
| CDS CCA 90 bp | TTCAACTTTATTGTAATGTGTATCTTCATCCATTTGGACAAGTCCTaGAAAACTTACACTTTGCGCCACAGCCGTCCCAGCAAAGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: FNFIVMCIFIHLDKS*KTYTLRHSRPSKEP Trigger: CGGCTCTTTGCTGGGACGGCTGTGGCGCAAAGTGTAAGTTTTCCAGGACTTGTCCAAATGGATGAAGATACACATTACAATAAAGTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000172459.8 |
||
| CDS-3UTR CAA 90 bp | ACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGAGGGGGATAGGGTTCTaGAGACTCCTGAGAGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: TQIQRCNPTSSRTFLSTKRGIGF*RLLRAS Trigger: GCTTGCTCTCAGGAGTCTCAAGAACCCTATCCCCCT...CTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
||
| CDS CCA 90 bp | AGGCATACTGGCTTGAACTGCACTCAGGTTTGCCTTAGGATAATATaGGACCATCAGATAGGCAACAGGATCAGACTTACACAAAAACAA | + |
|
Preference number: 5 (lower is better) Translates to: RHTGLNCTQVCLRII*DHQIGNRIRLTQKQ Trigger: TTGTTTTTGTGTAAGTCTGATCCTGTTGCCTATCTGATGGTCCCATATTATCCTAAGGCAAACCTGAGTGCAGTTCAAGCCAGTATGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000167846.2 ENSMUST00000172459.8 |
||
| CDS-3UTR CAA 90 bp | CAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAGGTAGCTGTTTTCTCTaGCTGCAGCTCCTGGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: QIQRCNPTSSRTFLSTKQGSCFL*LQLLGS Trigger: ACTGCCCAGGAGCTGCAGCAAGAGAAAACAGCTACC...TTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
||
| CDS-3UTR CAA 90 bp | ACAACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTCACACCAGAGGACGCTaGCTGCTAAGTTCCTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: TTQIQRCNPTSSRTFLSTHTRGR*LLSSFM Trigger: CATGAAGGAACTTAGCAGCAAGCGTCCTCTGGTGTG...AGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024171.14 ENSMUST00000167846.2 |
||
| CDS-3UTR CAA 90 bp | CAACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTACACACCAGAGGACGCTaGCTGCTAAGTTCCTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: QPKSKDAIQLVPEHFCLLHTRGR*LLSSFM Trigger: CATGAAGGAACTTAGCAGCAAGCGTCCTCTGGTGTG...TAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024171.14 ENSMUST00000167846.2 |
||
| CDS-3UTR CAA 90 bp | CAACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAGACAGCTCTAGCTCTTaGCAGACACATGACTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: QPKSKDAIQLVPEHFCLLDSSSS*QTHDSV Trigger: GACTGAGTCATGTGTCTGCAAAGAGCTAGAGCTGTC...TAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
||
| CDS-3UTR CAA 90 bp | ACAACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTACACTGTCCTTATACTaGGACAGCAAGGTGGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: TTQIQRCNPTSSRTFLSTTLSLY*DSKVAM Trigger: CATTGCCACCTTGCTGTCCAAGTATAAGGACAGTGT...AGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
||
| CDS TCA 90 bp | TATCTATCCAGACTCTCCATCTTTGATTCATCTTCTCTGCTATGCTaGGTACATTCAATCTCTTTTTCTGGGATTGGAACTGATTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: YLSRLSIFDSSSLLC*VHSISFSGIGTDFP Trigger: GGGGAAATCAGTTCCAATCCCAGAAAAAGAGATTGAATGTACTCAGCATAGCAGAGAAGATGAATCAAAGATGGAGAGTCTGGATAGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000167846.2 ENSMUST00000172459.8 |
||
| CDS GCA 90 bp | TCATTCAAAGATGCTAGAGTAGTAAAGGACCCTTCATCCAACACTTaGATAGCATCTGAAAGGTCATTTCCAAAGCGAATACTGATGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SFKDARVVKDPSSNT*IASERSFPKRILML Trigger: TAACATCAGTATTCGCTTTGGAAATGACCTTTCAGATGCTATGCAAGTGTTGGATGAAGGGTCCTTTACTACTCTAGCATCTTTGAATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000172459.8 |
||
| CDS-3UTR CAA 90 bp | ACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCTGCAAATCCTTTCTTaGCCACTTCTTCCCCTATAT | + |
|
Preference number: 5 (lower is better) Translates to: TQIQRCNPTSSRTFLSTKLQILS*PLLPLY Trigger: ATATAGGGGAAGAAGTGGCAAAGAAAGGATTTGCAG...CTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
||
| CDS-3UTR CAA 90 bp | TCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAACAGCTCATTAAGACAAGTTaGGATCTTCTCCTGAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SKDAIQLVPEHFCLLSKQLIKTS*DLLLSN Trigger: GTTGCTCAGGAGAAGATCCAAACTTGTCTTAATGAG...CTGTTTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
||
| CDS GCA 90 bp | TTTCACTATATCTATCCAGACTCTCCATCTTTGATTCATCTTCTCTaGTATGCTGAGTACATTCAATCTCTTTTTCTGGGATTGGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: FHYIYPDSPSLIHLL*YAEYIQSLFLGLEL Trigger: CAGTTCCAATCCCAGAAAAAGAGATTGAATGTACTCAGCATAGCAGAGAAGATGAATCAAAGATGGAGAGTCTGGATAGATATAGTGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000167846.2 ENSMUST00000172459.8 |
||
| CDS-3UTR CAA 90 bp | TCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAACAGTGTATCTTCATCCATTaGGACAAGTCCTGGAAAACT | + |
|
Preference number: 5 (lower is better) Translates to: SKDAIQLVPEHFCLLSKQCIFIH*DKSWKT Trigger: AGTTTTCCAGGACTTGTCCAAATGGATGAAGATACA...CTGTTTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
||
| CDS-3UTR CAA 90 bp | AGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAACAGAACAACACGAACAGCTTCTGTaGTACTTCATTTCTTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RCNPTSSRTFLSTKQTEQHEQLL*YFISFS Trigger: GCTGAAAGAAATGAAGTACAACAGAAGCTGTTCGTG...TTGTTCTGTTTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
||
| CDS-3UTR CAA 90 bp | CAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAACATATAAGTCTGAACTaGCAGAAGGAGGTTTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QIQRCNPTSSRTFLSTKQHISLN*QKEVFQ Trigger: CTGGAAAACCTCCTTCTGCAAGTTCAGACTTATATG...TTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
||
| CDS-3UTR CAA 90 bp | CAACCCAAATCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAATAGTTTTTAGCACTTaGCATCTGTACCAGCACTTA | + |
|
Preference number: 5 (lower is better) Translates to: QPKSKDAIQLVPEHFCLLIVFST*HLYQHL Trigger: TAAGTGCTGGTACAGATGCAAAGTGCTAAAAACTAT...TAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGATTTGGGTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
||
| CDS-3UTR CAA 90 bp | TCCAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAACAGTTATTAGTTCCTTCTTaGGCCTTTCCATACACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SKDAIQLVPEHFCLLSKQLLVPS*AFPYTD Trigger: ATCAGTGTATGGAAAGGCCAAAGAAGGAACTAATAA...CTGTTTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
||
| CDS-3UTR CAA 90 bp | CAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAACAGAACTGATTCTAAAGAAGTaGCTAAGTCCTGCAATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: QRCNPTSSRTFLSTKQTELILKK*LSPAMF Trigger: AAACATTGCAGGACTTAGCAACTTCTTTAGAATCAG...TTCTGTTTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
||
| CDS-3UTR CAA 90 bp | CAAAGATGCAATCCAACTAGTTCCAGAACATTTTTGTCTACTAAGCAAACAGAACTTAAAATAATCTCCTaGTCTATGACACCTTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QRCNPTSSRTFLSTKQTELKIIS*SMTPCS Trigger: TGAGCAAGGTGTCATAGACAAGGAGATTATTTTAAG...TTCTGTTTGCTTAGTAGACAAAAATGTTCTGGAACTAGTTGGATTGCATCTTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024171.14 |
||
| CDS CAA 90 bp | AAGAGAACTGGCTGCCCATTAACCTCGGAGCACACCAGAGGACGCTaGCTGCTAAGTTCCTTCATGGGCTCAGTGTCAAGAAGGTCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: KRTGCPLTSEHTRGR*LLSSFMGSVSRRSR Trigger: GCGGGACCTTCTTGACACTGAGCCCATGAAGGAACTTAGCAGCAAGCGTCCTCTGGTGTGCTCCGAGGTTAATGGGCAGCCAGTTCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000167846.2 ENSMUST00000172459.8 |
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| CDS GCA 72 bp | TCATCCATTTGGACAAGTCCTGGAAAACTTACACTTTaGGCCACAGCCGTCCCAGCAAAGAGCCGCTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: SSIWTSPGKLTL*ATAVPAKSRWP Trigger: GGGCCAGCGGCTCTTTGCTGGGACGGCTGTGGCGCAAAGTGTAAGTTTTCCAGGACTTGTCCAAATGGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000172459.8 |
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| CDS CAA 72 bp | GGCTGCCCATTAACCTCGGAGCACACCAGAGGACGCTaGCTGCTAAGTTCCTTCATGGGCTCAGTGTCAAGA | + |
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Preference number: 6 (lower is better) Translates to: GCPLTSEHTRGR*LLSSFMGSVSR Trigger: TCTTGACACTGAGCCCATGAAGGAACTTAGCAGCAAGCGTCCTCTGGTGTGCTCCGAGGTTAATGGGCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000167846.2 ENSMUST00000172459.8 |
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| CDS GCA 72 bp | ACCTTCTGGCTGCTCTGGAACCATGCCACAAGGTGCTaGAGAGATGCCTCTGTTTCACTCCTAATACTGGCG | + |
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Preference number: 6 (lower is better) Translates to: TFWLLWNHATRC*RDASVSLLILA Trigger: CGCCAGTATTAGGAGTGAAACAGAGGCATCTCTGCAGCACCTTGTGGCATGGTTCCAGAGCAGCCAGAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000172459.8 |
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| CDS CAA 72 bp | TTCATCCATTTGGACAAGTCCTGGAAAACTTACACTTaGCGCCACAGCCGTCCCAGCAAAGAGCCGCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: FIHLDKSWKTYT*RHSRPSKEPLA Trigger: GGCCAGCGGCTCTTTGCTGGGACGGCTGTGGCGCAAAGTGTAAGTTTTCCAGGACTTGTCCAAATGGATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000172459.8 |
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| CDS GCA 72 bp | GGACAGATCAAAAACCTTCTGGCTGCTCTGGAACCATaGCACAAGGTGCTGCAGAGATGCCTCTGTTTCACT | + |
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Preference number: 6 (lower is better) Translates to: GQIKNLLAALEP*HKVLQRCLCFT Trigger: AGTGAAACAGAGGCATCTCTGCAGCACCTTGTGGCATGGTTCCAGAGCAGCCAGAAGGTTTTTGATCTGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000172459.8 |
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| CDS CCA 72 bp | TCATCCAAGGACAGATCAAAAACCTTCTGGCTGCTCTaGAACCATGCCACAAGGTGCTGCAGAGATGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SSKDRSKTFWLL*NHATRCCRDAS Trigger: AGAGGCATCTCTGCAGCACCTTGTGGCATGGTTCCAGAGCAGCCAGAAGGTTTTTGATCTGTCCTTGGATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000172459.8 |
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| CDS CAA 72 bp | TCAGGTGAGAGCAAACTCAATCCACCAACCATCGCGTaGACTGAAGCTCGCTGGCTCTCAGATTTGGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: SGESKLNPPTIA*TEARWLSDLVK Trigger: CTTCACCAAATCTGAGAGCCAGCGAGCTTCAGTCAACGCGATGGTTGGTGGATTGAGTTTGCTCTCACCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000172459.8 |
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| CDS GCA 72 bp | AAAACCTTCTGGCTGCTCTGGAACCATGCCACAAGGTaGTGCAGAGATGCCTCTGTTTCACTCCTAATACTG | + |
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Preference number: 6 (lower is better) Translates to: KTFWLLWNHATR*CRDASVSLLIL Trigger: CAGTATTAGGAGTGAAACAGAGGCATCTCTGCAGCACCTTGTGGCATGGTTCCAGAGCAGCCAGAAGGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000172459.8 |
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| CDS GCA 72 bp | ATGGTTCATCCAAGGACAGATCAAAAACCTTCTGGCTaGTCTGGAACCATGCCACAAGGTGCTGCAGAGATG | + |
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Preference number: 6 (lower is better) Translates to: MVHPRTDQKPSG*SGTMPQGAAEM Trigger: CATCTCTGCAGCACCTTGTGGCATGGTTCCAGAGCAGCCAGAAGGTTTTTGATCTGTCCTTGGATGAACCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000172459.8 |
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| CDS CCA 72 bp | GTCAATGGTTCATCCAAGGACAGATCAAAAACCTTCTaGCTGCTCTGGAACCATGCCACAAGGTGCTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: VNGSSKDRSKTF*LLWNHATRCCR Trigger: TCTGCAGCACCTTGTGGCATGGTTCCAGAGCAGCCAGAAGGTTTTTGATCTGTCCTTGGATGAACCATTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000172459.8 |
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| CDS GCA 72 bp | AAGCTCTATGGTAAGAGGCTGCTCTCTGAATCACCCTaGCTTCTGTGTCAACATCCACGGAATAGCCCTTTA | + |
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Preference number: 6 (lower is better) Translates to: KLYGKRLLSESP*LLCQHPRNSPL Trigger: TAAAGGGCTATTCCGTGGATGTTGACACAGAAGGCAGGGTGATTCAGAGAGCAGCCTCTTACCATAGAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000167846.2 ENSMUST00000172459.8 |
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| CDS CAA 90 bp | CATCAATGCCTGAGGTCAGTCTGCACTTTTCTGCAAATCCTTTCTTaGCCACTTCTTCCCCTATATCGACAGTGCCATACTCAGCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: HQCLRSVCTFLQILS*PLLPLYRQCHTQPE Trigger: CTCAGGCTGAGTATGGCACTGTCGATATAGGGGAAGAAGTGGCAAAGAAAGGATTTGCAGAAAAGTGCAGACTGACCTCAGGCATTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000172459.8 |
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| CDS GCA 72 bp | TCATACTTCACATCAAGAGTCAGCCTCCCGTTAAAATaGCCCTTTGGCCTGCTGAAGGTTGACTGGTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: SYFTSRVSLPLK*PFGLLKVDWFD Trigger: ATCAAACCAGTCAACCTTCAGCAGGCCAAAGGGGCATTTTAACGGGAGGCTGACTCTTGATGTGAAGTATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000172459.8 |
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| CDS CCA 72 bp | AACTTTCCTTTGGAAATGTCACGTGATTGCCTGCACTaGTCTCATACTTCACATCAAGAGTCAGCCTCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: NFPLEMSRDCLH*SHTSHQESASR Trigger: ACGGGAGGCTGACTCTTGATGTGAAGTATGAGACCAGTGCAGGCAATCACGTGACATTTCCAAAGGAAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000172459.8 |
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| CDS TCA 72 bp | TCACCAGCAGCCAAACTTTCCTTTGGAAATGTCACGTaGTTGCCTGCACTGGTCTCATACTTCACATCAAGA | + |
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Preference number: 6 (lower is better) Translates to: SPAAKLSFGNVT*LPALVSYFTSR Trigger: TCTTGATGTGAAGTATGAGACCAGTGCAGGCAATCACGTGACATTTCCAAAGGAAAGTTTGGCTGCTGGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000172459.8 |
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| CDS TCA 72 bp | ACTTGCAGAAGGAGGTTTTCCAGTTTTCAATTCAGGTaGGAGCAAACTCAATCCACCAACCATCGCGTTGAC | + |
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Preference number: 6 (lower is better) Translates to: TCRRRFSSFQFR*EQTQSTNHRVD Trigger: GTCAACGCGATGGTTGGTGGATTGAGTTTGCTCTCACCTGAATTGAAAACTGGAAAACCTCCTTCTGCAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000172459.8 |
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| CDS CCA 72 bp | ATTGTAATGTGTATCTTCATCCATTTGGACAAGTCCTaGAAAACTTACACTTTGCGCCACAGCCGTCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: IVMCIFIHLDKS*KTYTLRHSRPS Trigger: GCTGGGACGGCTGTGGCGCAAAGTGTAAGTTTTCCAGGACTTGTCCAAATGGATGAAGATACACATTACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000172459.8 |
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| CDS CCA 72 bp | GGCTTGAACTGCACTCAGGTTTGCCTTAGGATAATATaGGACCATCAGATAGGCAACAGGATCAGACTTACA | + |
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Preference number: 6 (lower is better) Translates to: GLNCTQVCLRII*DHQIGNRIRLT Trigger: TGTAAGTCTGATCCTGTTGCCTATCTGATGGTCCCATATTATCCTAAGGCAAACCTGAGTGCAGTTCAAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000167846.2 ENSMUST00000172459.8 |
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| CDS CAA 90 bp | CATCTTCTCTGCTATGCTGAGTACATTCAATCTCTTTTTCTGGGATaGGAACTGATTTCCCCTTTGGAAGCAAGAAACATTCAGCATTCA | + |
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Preference number: 6 (lower is better) Translates to: HLLCYAEYIQSLFLG*ELISPLEARNIQHS Trigger: TGAATGCTGAATGTTTCTTGCTTCCAAAGGGGAAATCAGTTCCAATCCCAGAAAAAGAGATTGAATGTACTCAGCATAGCAGAGAAGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000167846.2 ENSMUST00000172459.8 |
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| CDS TCA 72 bp | AGACTCTCCATCTTTGATTCATCTTCTCTGCTATGCTaGGTACATTCAATCTCTTTTTCTGGGATTGGAACT | + |
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Preference number: 6 (lower is better) Translates to: RLSIFDSSSLLC*VHSISFSGIGT Trigger: AGTTCCAATCCCAGAAAAAGAGATTGAATGTACTCAGCATAGCAGAGAAGATGAATCAAAGATGGAGAGTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000167846.2 ENSMUST00000172459.8 |
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| CDS GCA 72 bp | TATGTACTTAAAATAATCTCCTTGTCTATGACACCTTaGTCAATGAGAGACAGCTCTAGCTCTTTGCAGACA | + |
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Preference number: 6 (lower is better) Translates to: YVLKIISLSMTP*SMRDSSSSLQT Trigger: TGTCTGCAAAGAGCTAGAGCTGTCTCTCATTGAGCAAGGTGTCATAGACAAGGAGATTATTTTAAGTACATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000172459.8 |
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| CDS CAA 72 bp | ACCAGGCACTTATCATCGCTGATAGTTTTTAGCACTTaGCATCTGTACCAGCACTTATCTTCAGAAAACAAT | + |
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Preference number: 6 (lower is better) Translates to: TRHLSSLIVFST*HLYQHLSSENN Trigger: ATTGTTTTCTGAAGATAAGTGCTGGTACAGATGCAAAGTGCTAAAAACTATCAGCGATGATAAGTGCCTGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000172459.8 |
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| CDS CAA 72 bp | TGCTATGCTGAGTACATTCAATCTCTTTTTCTGGGATaGGAACTGATTTCCCCTTTGGAAGCAAGAAACATT | + |
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Preference number: 6 (lower is better) Translates to: CYAEYIQSLFLG*ELISPLEARNI Trigger: AATGTTTCTTGCTTCCAAAGGGGAAATCAGTTCCAATCCCAGAAAAAGAGATTGAATGTACTCAGCATAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000167846.2 ENSMUST00000172459.8 |
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| CDS CAA 90 bp | AAACAGTCAATCATCTGCTTTTTAAACTCAACACTGTCCTTATACTaGGACAGCAAGGTGGCAATGAACTTTTCCTCAGAATGGATCTTT | + |
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Preference number: 6 (lower is better) Translates to: KQSIICFLNSTLSLY*DSKVAMNFSSEWIF Trigger: AAAGATCCATTCTGAGGAAAAGTTCATTGCCACCTTGCTGTCCAAGTATAAGGACAGTGTTGAGTTTAAAAAGCAGATGATTGACTGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000172459.8 |
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| CDS GCA 72 bp | CTTATTTTTACTGACATTCTGGGCCCAAAATGTTACTaGATCTTCTACATGACTTCCAACAACATCTTCAAC | + |
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Preference number: 6 (lower is better) Translates to: LIFTDILGPKCY*IFYMTSNNIFN Trigger: GTTGAAGATGTTGTTGGAAGTCATGTAGAAGATGCAGTAACATTTTGGGCCCAGAATGTCAGTAAAAATAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000172459.8 |
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| CDS GCA 72 bp | CCCTTTGGAAGCAAGAAACATTCAGCATTCAAAACCTaGTCAGCAGTCATTGAACTTCTAAAATATATCAAG | + |
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Preference number: 6 (lower is better) Translates to: PFGSKKHSAFKT*SAVIELLKYIK Trigger: CTTGATATATTTTAGAAGTTCAATGACTGCTGAGCAGGTTTTGAATGCTGAATGTTTCTTGCTTCCAAAGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000167846.2 ENSMUST00000172459.8 |
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| CDS CAA 90 bp | CACCATTTCTTGTCTTTTCACTATATCTATCCAGACTCTCCATCTTaGATTCATCTTCTCTGCTATGCTGAGTACATTCAATCTCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: HHFLSFHYIYPDSPS*IHLLCYAEYIQSLF Trigger: AAAAAGAGATTGAATGTACTCAGCATAGCAGAGAAGATGAATCAAAGATGGAGAGTCTGGATAGATATAGTGAAAAGACAAGAAATGGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000167846.2 ENSMUST00000172459.8 |
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| CDS TCA 72 bp | TGTCTTTTCACTATATCTATCCAGACTCTCCATCTTTaGTTCATCTTCTCTGCTATGCTGAGTACATTCAAT | + |
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Preference number: 6 (lower is better) Translates to: CLFTISIQTLHL*FIFSAMLSTFN Trigger: ATTGAATGTACTCAGCATAGCAGAGAAGATGAATCAAAGATGGAGAGTCTGGATAGATATAGTGAAAAGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000167846.2 ENSMUST00000172459.8 |
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| CDS CAA 72 bp | TTGTCTTTTCACTATATCTATCCAGACTCTCCATCTTaGATTCATCTTCTCTGCTATGCTGAGTACATTCAA | + |
|
Preference number: 6 (lower is better) Translates to: LSFHYIYPDSPS*IHLLCYAEYIQ Trigger: TTGAATGTACTCAGCATAGCAGAGAAGATGAATCAAAGATGGAGAGTCTGGATAGATATAGTGAAAAGACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 ENSMUST00000167846.2 ENSMUST00000172459.8 |
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| CDS GCA 72 bp | TTTCCATACACTGATTCTAAAGAAGTTGCTAAGTCCTaGAATGTTTTTAAGCGTTTATCAAGTGGTAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: FPYTDSKEVAKS*NVFKRLSSGKS Trigger: TGACTTACCACTTGATAAACGCTTAAAAACATTGCAGGACTTAGCAACTTCTTTAGAATCAGTGTATGGAAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024171.14 ENSMUST00000163954.8 |
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