Pregenerated sensors for STK3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022329Ensembl transcript IDs: ENSMUST00000018476.14, ENSMUST00000067033.8, ENSMUST00000138841.2, ENSMUST00000226555.2
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAATAAAGGACATTGGAACACAAAGCCCTCCAGTGCTGTATGATTaGCTAAGCAACAGCTTTGGATTTCTAGTCTCCACATACAGCTTT | + |
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Preference number: 1 (lower is better) Translates to: GIKDIGTQSPPVLYD*LSNSFGFLVSTYSF Trigger: AAAGCTGTATGTGGAGACTAGAAATCCAAAGCTGTTGCTTAGTCAATCATACAGCACTGGAGGGCTTTGTGTTCCAATGTCCTTTATTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| 3UTR TCA 90 bp | CATAGGAATAAAGGACATTGGAACACAAAGCCCTCCAGTGCTGTATaGTTGACTAAGCAACAGCTTTGGATTTCTAGTCTCCACATACAG | + |
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Preference number: 1 (lower is better) Translates to: HRNKGHWNTKPSSAV*LTKQQLWISSLHIQ Trigger: CTGTATGTGGAGACTAGAAATCCAAAGCTGTTGCTTAGTCAATCATACAGCACTGGAGGGCTTTGTGTTCCAATGTCCTTTATTCCTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGCCATGACTTTGTGTCTATTGGAGTTGAAGGAGTACACTCAGAGCTCCCTGATTCTTGTGGTTGCTTaGTTTCTGGTCATCCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: TAMTLCLLELKEYTQSSLILVVA*FLVILR Trigger: TCTCAGGATGACCAGAAACCAAGCAACCACAAGAAT...CAGGGAGCTCTGAGTGTACTCCTTCAACTCCAATAGACACAAAGTCATGGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGCCATGACTTTGTGTCTATTGGAGTTGAAGGAGTACACTCAGAGCTCCCTGTTCAATTCTTGTGGTTaGTTGGTTTCTGGTCATCCT | + |
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Preference number: 2 (lower is better) Translates to: TAMTLCLLELKEYTQSSLFNSCG*LVSGHP Trigger: AGGATGACCAGAAACCAAGCAACCACAAGAATTGAA...CAGGGAGCTCTGAGTGTACTCCTTCAACTCCAATAGACACAAAGTCATGGCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| 3UTR-3UTR GCA 90 bp | GTAGTGCAGGAAATGACTGGTCCCAGGTCAATTACACAAATGCTAATGCTCTGCACACTCAGAGCTCCCTaGTTAGTGTACAATTTGGTT | + |
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Preference number: 2 (lower is better) Translates to: VVQEMTGPRSITQMLMLCTLRAP*LVYNLV Trigger: AACCAAATTGTACACTAAGCAGGGAGCTCTGAGTGT...GCAGAGCATTAGCATTTGTGTAATTGACCTGGGACCAGTCATTTCCTGCACTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGTGCAGGAAATGACTGGTCCCAGGTCAATTACACAAATGCTAATGCTCTGCTTATTGTCAGATACATaGTGCTTACCAATTCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: VVQEMTGPRSITQMLMLCLLSDT*CLPIPR Trigger: CCTGGGAATTGGTAAGCATCATGTATCTGACAATAA...GCAGAGCATTAGCATTTGTGTAATTGACCTGGGACCAGTCATTTCCTGCACTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
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| 3UTR-3UTR GCA 90 bp | GTAGTGCAGGAAATGACTGGTCCCAGGTCAATTACACAAATGCTAATGCTCTGCTTCAATTCTTGTGGTTaGTTGGTTTCTGGTCATCCT | + |
|
Preference number: 2 (lower is better) Translates to: VVQEMTGPRSITQMLMLCFNSCG*LVSGHP Trigger: AGGATGACCAGAAACCAAGCAACCACAAGAATTGAA...GCAGAGCATTAGCATTTGTGTAATTGACCTGGGACCAGTCATTTCCTGCACTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGAGAGAAGTGCGCACGTTTGTTGTTCTCATCCTTTCAAAACGACATCAGAGATTCTTGTGGTTGCTTaGTTTCTGGTCATCCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: RERSAHVCCSHPFKTTSEILVVA*FLVILR Trigger: TCTCAGGATGACCAGAAACCAAGCAACCACAAGAAT...CTCTGATGTCGTTTTGAAAGGATGAGAACAACAAACGTGCGCACTTCTCTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAGTGCGCACGTTTGTTGTTCTCATCCTTTCAAAACGACATCAGAGTGGAGAATTCTTGTGGTTGCTTaGTTTCTGGTCATCCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: RSAHVCCSHPFKTTSEWRILVVA*FLVILR Trigger: TCTCAGGATGACCAGAAACCAAGCAACCACAAGAAT...TCTCCACTCTGATGTCGTTTTGAAAGGATGAGAACAACAAACGTGCGCACTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| 3UTR-3UTR CCA 90 bp | ACACACACACAGTCAAAAAGGACATGTGTAGTGCAGGAAATGACTGGTCCCAGGACTAAGCAACAGCTTTaGATTTCTAGTCTCCACATA | + |
|
Preference number: 2 (lower is better) Translates to: THTQSKRTCVVQEMTGPRTKQQL*ISSLHI Trigger: TATGTGGAGACTAGAAATCCAAAGCTGTTGCTTAGT...CCTGGGACCAGTCATTTCCTGCACTACACATGTCCTTTTTGACTGTGTGTGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTGTCTATTGGAGTTGAAGGAGTACACTCAGAGCTCCCTGCTTAGTGTACAAAGGAATAAAGGACATTaGAACACAAAGCCCTCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: LCLLELKEYTQSSLLSVQRNKGH*NTKPSS Trigger: ACTGGAGGGCTTTGTGTTCCAATGTCCTTTATTCCT...TTGTACACTAAGCAGGGAGCTCTGAGTGTACTCCTTCAACTCCAATAGACACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGGGTTCCTATTACAGTGTTGCGTTTTGCCATTGTATCTGTTAACTGGCCAGTATTTCCTGAAGATCTaGCTCAACAGGTACTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: MGFLLQCCVLPLYLLTGQYFLKI*LNRYLL Trigger: AAGCAAGTACCTGTTGAGTCAGATCTTCAGGAAATA...CTGGCCAGTTAACAGATACAATGGCAAAACGCAACACTGTAATAGGAACCCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138841.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCCTATTACAGTGTTGCGTTTTGCCATTGTATCTGTTAACTGGCCAGCCACTAGGTACTTGCTTAATTaGAACCACTTGACCAGATTC | + |
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Preference number: 2 (lower is better) Translates to: VPITVLRFAIVSVNWPATRYLLN*NHLTRF Trigger: GAATCTGGTCAAGTGGTTGCAATTAAGCAAGTACCT...AGTGGCTGGCCAGTTAACAGATACAATGGCAAAACGCAACACTGTAATAGGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138841.2 |
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| 3UTR CAA 90 bp | TTCAGTATAAAATGTCTGGTCCATTTGAACATTACAGCCATGACTTaGTGTCTATTGGAGTTGAAGGAGTACACTCAGAGCTCCCTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: FSIKCLVHLNITAMT*CLLELKEYTQSSLL Trigger: AAGCAGGGAGCTCTGAGTGTACTCCTTCAACTCCAATAGACACAAAGTCATGGCTGTAATGTTCAAATGGACCAGACATTTTATACTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTGTCTATTGGAGTTGAAGGAGTACACTCAGAGCTCCCTGCTTAGTGTACAAACTAAGCAACAGCTTTaGATTTCTAGTCTCCACATA | + |
|
Preference number: 2 (lower is better) Translates to: LCLLELKEYTQSSLLSVQTKQQL*ISSLHI Trigger: TATGTGGAGACTAGAAATCCAAAGCTGTTGCTTAGT...TTGTACACTAAGCAGGGAGCTCTGAGTGTACTCCTTCAACTCCAATAGACACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCCTATTACAGTGTTGCGTTTTGCCATTGTATCTGTTAACTGGCCAGCCACTGTACTTCACAACATATaGACTGTCACATTGTTGCAT | + |
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Preference number: 2 (lower is better) Translates to: VPITVLRFAIVSVNWPATVLHNI*TVTLLH Trigger: ATGCAACAATGTGACAGTCCATATGTTGTGAAGTAC...AGTGGCTGGCCAGTTAACAGATACAATGGCAAAACGCAACACTGTAATAGGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138841.2 |
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| 3UTR-3UTR CAA 90 bp | ACACACACACAGTCAAAAAGGACATGTGTAGTGCAGGAAATGACTGGTCCCAGGATGACTTTGTGTCTATaGGAGTTGAAGGAGTACACT | + |
|
Preference number: 3 (lower is better) Translates to: THTQSKRTCVVQEMTGPRMTLCL*ELKEYT Trigger: AGTGTACTCCTTCAACTCCAATAGACACAAAGTCAT...CCTGGGACCAGTCATTTCCTGCACTACACATGTCCTTTTTGACTGTGTGTGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
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| 3UTR TCA 72 bp | GACATTGGAACACAAAGCCCTCCAGTGCTGTATGATTaGCTAAGCAACAGCTTTGGATTTCTAGTCTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: DIGTQSPPVLYD*LSNSFGFLVST Trigger: TGTGGAGACTAGAAATCCAAAGCTGTTGCTTAGTCAATCATACAGCACTGGAGGGCTTTGTGTTCCAATGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| 3UTR CCA 72 bp | ACAGTCAAAAAGGACATGTGTAGTGCAGGAAATGACTaGTCCCAGGTCAATTACACAAATGCTAATGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TVKKDMCSAGND*SQVNYTNANAL Trigger: CAGAGCATTAGCATTTGTGTAATTGACCTGGGACCAGTCATTTCCTGCACTACACATGTCCTTTTTGACTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
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| 3UTR-3UTR CAA 90 bp | ATGTGTAGTGCAGGAAATGACTGGTCCCAGGTCAATTACACAAATGCTAATGCTGAATTCCTTCAATTCTaGTGGTTGCTTGGTTTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: MCSAGNDWSQVNYTNANAEFLQF*WLLGFW Trigger: CCAGAAACCAAGCAACCACAAGAATTGAAGGAATTC...AGCATTAGCATTTGTGTAATTGACCTGGGACCAGTCATTTCCTGCACTACACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
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| 3UTR-3UTR CAA 90 bp | ATGTGTAGTGCAGGAAATGACTGGTCCCAGGTCAATTACACAAATGCTAATGCTAAGTGCGCACGTTTGTaGTTCTCATCCTTTCAAAAC | + |
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Preference number: 3 (lower is better) Translates to: MCSAGNDWSQVNYTNANAKCARL*FSSFQN Trigger: GTTTTGAAAGGATGAGAACAACAAACGTGCGCACTT...AGCATTAGCATTTGTGTAATTGACCTGGGACCAGTCATTTCCTGCACTACACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
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| 3UTR GCA 72 bp | TCAAAACGACATCAGAGTGGAGACAACTGTAAAGTTTaGTTTTGGGAAATTTATCTAGGTGTGTACCATCAT | + |
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Preference number: 3 (lower is better) Translates to: SKRHQSGDNCKV*FWEIYLGVYHH Trigger: ATGATGGTACACACCTAGATAAATTTCCCAAAAGCAAACTTTACAGTTGTCTCCACTCTGATGTCGTTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| 3UTR GCA 72 bp | CTTAATTGCAACCACTTGACCAGATTCCTTATGTATTaGTTTAAAAACACTTCCATAAGACGGTTTGTCAAC | + |
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Preference number: 3 (lower is better) Translates to: LNCNHLTRFLMY*FKNTSIRRFVN Trigger: GTTGACAAACCGTCTTATGGAAGTGTTTTTAAAGCAATACATAAGGAATCTGGTCAAGTGGTTGCAATTAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138841.2 |
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| CDS-3UTR CCA 90 bp | AGAGAGAGAAGTGCGCACGTTTGTTGTTCTCATCCTTTCAAAACGACATCAGAGCACTCATCGTGCTGGTaGCCCGCATTGTGCCCACGC | + |
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Preference number: 4 (lower is better) Translates to: RERSAHVCCSHPFKTTSEHSSCW*PALCPR Trigger: GCGTGGGCACAATGCGGGCCACCAGCACGATGAGTG...CTCTGATGTCGTTTTGAAAGGATGAGAACAACAAACGTGCGCACTTCTCTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| CDS-3UTR GCA 90 bp | GAGAAGTGCGCACGTTTGTTGTTCTCATCCTTTCAAAACGACATCAGAGTGGAGCTCCTTCACTCATCGTaGTGGTGGCCCGCATTGTGC | + |
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Preference number: 4 (lower is better) Translates to: EKCARLLFSSFQNDIRVELLHSS*WWPALC Trigger: GCACAATGCGGGCCACCAGCACGATGAGTGAAGGAG...CTCCACTCTGATGTCGTTTTGAAAGGATGAGAACAACAAACGTGCGCACTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| CDS-3UTR CCA 90 bp | AAAGAACACACACACACAGTCAAAAAGGACATGTGTAGTGCAGGAAATGACTGGCACTCATCGTGCTGGTaGCCCGCATTGTGCCCACGC | + |
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Preference number: 4 (lower is better) Translates to: KEHTHTVKKDMCSAGNDWHSSCW*PALCPR Trigger: GCGTGGGCACAATGCGGGCCACCAGCACGATGAGTG...CCAGTCATTTCCTGCACTACACATGTCCTTTTTGACTGTGTGTGTGTGTTCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
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| CDS-3UTR CCA 90 bp | GAGAAGTGCGCACGTTTGTTGTTCTCATCCTTTCAAAACGACATCAGAGTGGAGCTTCACTCATCGTGCTaGTGGCCCGCATTGTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: EKCARLLFSSFQNDIRVELHSSC*WPALCP Trigger: TGGGCACAATGCGGGCCACCAGCACGATGAGTGAAG...CTCCACTCTGATGTCGTTTTGAAAGGATGAGAACAACAAACGTGCGCACTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| CDS-3UTR GCA 90 bp | AGAAGTGCGCACGTTTGTTGTTCTCATCCTTTCAAAACGACATCAGAGTGGAGACTCCTTCACTCATCGTaGTGGTGGCCCGCATTGTGC | + |
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Preference number: 4 (lower is better) Translates to: RSAHVCCSHPFKTTSEWRLLHSS*WWPALC Trigger: GCACAATGCGGGCCACCAGCACGATGAGTGAAGGAG...TCTCCACTCTGATGTCGTTTTGAAAGGATGAGAACAACAAACGTGCGCACTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| CDS-3UTR CCA 90 bp | ACAGCCATGACTTTGTGTCTATTGGAGTTGAAGGAGTACACTCAGAGCTCCCTGTTTTTAGCTTACTCTTaGACGCCGGCGGCTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: TAMTLCLLELKEYTQSSLFLAYS*TPAAAP Trigger: TGGAGCAGCCGCCGGCGTCCAAGAGTAAGCTAAAAA...CAGGGAGCTCTGAGTGTACTCCTTCAACTCCAATAGACACAAAGTCATGGCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018476.14 |
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| CDS-3UTR CCA 90 bp | AGAAGTGCGCACGTTTGTTGTTCTCATCCTTTCAAAACGACATCAGAGTGGAGACTTCACTCATCGTGCTaGTGGCCCGCATTGTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: RSAHVCCSHPFKTTSEWRLHSSC*WPALCP Trigger: TGGGCACAATGCGGGCCACCAGCACGATGAGTGAAG...TCTCCACTCTGATGTCGTTTTGAAAGGATGAGAACAACAAACGTGCGCACTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| CDS-3UTR CCA 90 bp | AGAAGTGCGCACGTTTGTTGTTCTCATCCTTTCAAAACGACATCAGAGTGGAGACAACATATGGACTCTTaGACGCCGGCGGCTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RSAHVCCSHPFKTTSEWRQHMDS*TPAAAP Trigger: TGGAGCAGCCGCCGGCGTCCAAGAGTCCATATGTTG...TCTCCACTCTGATGTCGTTTTGAAAGGATGAGAACAACAAACGTGCGCACTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067033.8 |
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| CDS-3UTR CCA 90 bp | AAAAGTAGAATTCCTTCAATTCTTGTGGTTGCTTGGTTTCTGGTCATCCTGAGACACTCATCGTGCTGGTaGCCCGCATTGTGCCCACGC | + |
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Preference number: 4 (lower is better) Translates to: KSRIPSILVVAWFLVILRHSSCW*PALCPR Trigger: GCGTGGGCACAATGCGGGCCACCAGCACGATGAGTG...TCTCAGGATGACCAGAAACCAAGCAACCACAAGAATTGAAGGAATTCTACTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| CDS-3UTR CCA 90 bp | ATGGGGTTCCTATTACAGTGTTGCGTTTTGCCATTGTATCTGTTAACTGGCCAGTTTTTAGCTTACTCTTaGACGCCGGCGGCTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: MGFLLQCCVLPLYLLTGQFLAYS*TPAAAP Trigger: TGGAGCAGCCGCCGGCGTCCAAGAGTAAGCTAAAAA...CTGGCCAGTTAACAGATACAATGGCAAAACGCAACACTGTAATAGGAACCCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000138841.2 |
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| CDS-3UTR TCA 90 bp | AGAAGTGCGCACGTTTGTTGTTCTCATCCTTTCAAAACGACATCAGAGTGGAGACATGCCGTTTGGCTTTaGTTTCCATGGCTTCTGCGA | + |
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Preference number: 4 (lower is better) Translates to: RSAHVCCSHPFKTTSEWRHAVWL*FPWLLR Trigger: TCGCAGAAGCCATGGAAATCAAAGCCAAACGGCATG...TCTCCACTCTGATGTCGTTTTGAAAGGATGAGAACAACAAACGTGCGCACTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| CDS-3UTR TCA 90 bp | TTGTGTCTATTGGAGTTGAAGGAGTACACTCAGAGCTCCCTGCTTAGTGTACAATGTGCCCACGCTTTCTaGACTCGTCTTCACCATAGT | + |
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Preference number: 4 (lower is better) Translates to: LCLLELKEYTQSSLLSVQCAHAF*TRLHHS Trigger: ACTATGGTGAAGACGAGTTCAGAAAGCGTGGGCACA...TTGTACACTAAGCAGGGAGCTCTGAGTGTACTCCTTCAACTCCAATAGACACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| CDS-3UTR TCA 90 bp | ACAGCCATGACTTTGTGTCTATTGGAGTTGAAGGAGTACACTCAGAGCTCCCTGTCAAAGTCTCCATCTTaGGGAACTCTCCAGTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: TAMTLCLLELKEYTQSSLSKSPS*GTLQLS Trigger: TGACAACTGGAGAGTTCCTCAAGATGGAGACTTTGA...CAGGGAGCTCTGAGTGTACTCCTTCAACTCCAATAGACACAAAGTCATGGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| CDS-3UTR CCA 90 bp | ACAGCCATGACTTTGTGTCTATTGGAGTTGAAGGAGTACACTCAGAGCTCCCTGAGGTTTCCTGAATGTTaGTGGTGGGTTTGTAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: TAMTLCLLELKEYTQSSLRFPEC*WWVCRD Trigger: ATCCCTACAAACCCACCACCAACATTCAGGAAACCT...CAGGGAGCTCTGAGTGTACTCCTTCAACTCCAATAGACACAAAGTCATGGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| 3UTR CAA 72 bp | AGGTGGAATAGCAGGCAGAGAGAGAAGTGCGCACGTTaGTTGTTCTCATCCTTTCAAAACGACATCAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: RWNSRQREKCAR*LFSSFQNDIRV Trigger: CACTCTGATGTCGTTTTGAAAGGATGAGAACAACAAACGTGCGCACTTCTCTCTCTGCCTGCTATTCCACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| CDS-3UTR TCA 90 bp | GAGAAGTGCGCACGTTTGTTGTTCTCATCCTTTCAAAACGACATCAGAGTGGAGCTTCACCATAGTGTGTaGATCCAGCTCATCTTCATC | + |
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Preference number: 4 (lower is better) Translates to: EKCARLLFSSFQNDIRVELHHSV*IQLIFI Trigger: GATGAAGATGAGCTGGATTCACACACTATGGTGAAG...CTCCACTCTGATGTCGTTTTGAAAGGATGAGAACAACAAACGTGCGCACTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| CDS-3UTR TCA 90 bp | ATGTGTAGTGCAGGAAATGACTGGTCCCAGGTCAATTACACAAATGCTAATGCTTGTGCCCACGCTTTCTaGACTCGTCTTCACCATAGT | + |
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Preference number: 4 (lower is better) Translates to: MCSAGNDWSQVNYTNANACAHAF*TRLHHS Trigger: ACTATGGTGAAGACGAGTTCAGAAAGCGTGGGCACA...AGCATTAGCATTTGTGTAATTGACCTGGGACCAGTCATTTCCTGCACTACACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
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| CDS-3UTR CCA 90 bp | ACACACACACAGTCAAAAAGGACATGTGTAGTGCAGGAAATGACTGGTCCCAGGCCTGAATGTTGGTGGTaGGTTTGTAGGGATCATAAA | + |
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Preference number: 4 (lower is better) Translates to: THTQSKRTCVVQEMTGPRPECWW*VCRDHK Trigger: TTTATGATCCCTACAAACCCACCACCAACATTCAGG...CCTGGGACCAGTCATTTCCTGCACTACACATGTCCTTTTTGACTGTGTGTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
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| CDS-3UTR CCA 90 bp | ACAGCCATGACTTTGTGTCTATTGGAGTTGAAGGAGTACACTCAGAGCTCCCTGTTTCCTGAATGTTGGTaGTGGGTTTGTAGGGATCAT | + |
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Preference number: 4 (lower is better) Translates to: TAMTLCLLELKEYTQSSLFPECW*WVCRDH Trigger: ATGATCCCTACAAACCCACCACCAACATTCAGGAAA...CAGGGAGCTCTGAGTGTACTCCTTCAACTCCAATAGACACAAAGTCATGGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| CDS-3UTR CCA 90 bp | TTGTGTCTATTGGAGTTGAAGGAGTACACTCAGAGCTCCCTGCTTAGTGTACAATGTTCAATCATCGTCTaGGCTCCTTCACTCATCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LCLLELKEYTQSSLLSVQCSIIV*APSLIV Trigger: CACGATGAGTGAAGGAGCCCAGACGATGATTGAACA...TTGTACACTAAGCAGGGAGCTCTGAGTGTACTCCTTCAACTCCAATAGACACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCCATGACTTTGTGTCTATTGGAGTTGAAGGAGTACACTCAGAGCTCCCTGGGTCCGACTCTAACATaGTGCTGTTATGTTCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: TAMTLCLLELKEYTQSSLGPTLT*CCYVQS Trigger: TGATTGAACATAACAGCACCATGTTAGAGTCGGACC...CAGGGAGCTCTGAGTGTACTCCTTCAACTCCAATAGACACAAAGTCATGGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR TCA 90 bp | TTGTGTCTATTGGAGTTGAAGGAGTACACTCAGAGCTCCCTGCTTAGTGTACAAAAAGTTCAGGTTTCCTaGATGTTGGTGGTGGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LCLLELKEYTQSSLLSVQKVQVS*MLVVGL Trigger: CAAACCCACCACCAACATTCAGGAAACCTGAACTTT...TTGTACACTAAGCAGGGAGCTCTGAGTGTACTCCTTCAACTCCAATAGACACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGAAGTGCGCACGTTTGTTGTTCTCATCCTTTCAAAACGACATCAGAGCTTCACCATAGTGTGTaGATCCAGCTCATCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: RERSAHVCCSHPFKTTSELHHSV*IQLIFI Trigger: GATGAAGATGAGCTGGATTCACACACTATGGTGAAG...CTCTGATGTCGTTTTGAAAGGATGAGAACAACAAACGTGCGCACTTCTCTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR TCA 90 bp | ACAGCCATGACTTTGTGTCTATTGGAGTTGAAGGAGTACACTCAGAGCTCCCTGCATGACTCTTGTTCTTaGAGTCCTGCTTATCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TAMTLCLLELKEYTQSSLHDSCS*SPAYQS Trigger: ACTTTGATAAGCAGGACTTCAAGAACAAGAGTCATG...CAGGGAGCTCTGAGTGTACTCCTTCAACTCCAATAGACACAAAGTCATGGCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGTGCGCACGTTTGTTGTTCTCATCCTTTCAAAACGACATCAGAGTGGAGATCAAAGTCTCCATCTTaGGGAACTCTCCAGTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RSAHVCCSHPFKTTSEWRSKSPS*GTLQLS Trigger: TGACAACTGGAGAGTTCCTCAAGATGGAGACTTTGA...TCTCCACTCTGATGTCGTTTTGAAAGGATGAGAACAACAAACGTGCGCACTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR CCA 90 bp | GAGAAGTGCGCACGTTTGTTGTTCTCATCCTTTCAAAACGACATCAGAGTGGAGGGTCCGACTCTAACATaGTGCTGTTATGTTCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: EKCARLLFSSFQNDIRVEGPTLT*CCYVQS Trigger: TGATTGAACATAACAGCACCATGTTAGAGTCGGACC...CTCCACTCTGATGTCGTTTTGAAAGGATGAGAACAACAAACGTGCGCACTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGTGCGCACGTTTGTTGTTCTCATCCTTTCAAAACGACATCAGAGTGGAGATTTCTCGTTCCATCATaGGGTCTAGTGCTTTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSAHVCCSHPFKTTSEWRFLVPS*GLVLLA Trigger: GGCTAAAAGCACTAGACCCCATGATGGAACGAGAAA...TCTCCACTCTGATGTCGTTTTGAAAGGATGAGAACAACAAACGTGCGCACTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAGAGAAGTGCGCACGTTTGTTGTTCTCATCCTTTCAAAACGACATCAGAGTTTCTCGTTCCATCATaGGGTCTAGTGCTTTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RERSAHVCCSHPFKTTSEFLVPS*GLVLLA Trigger: GGCTAAAAGCACTAGACCCCATGATGGAACGAGAAA...CTCTGATGTCGTTTTGAAAGGATGAGAACAACAAACGTGCGCACTTCTCTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR CCA 90 bp | TTGTGTCTATTGGAGTTGAAGGAGTACACTCAGAGCTCCCTGCTTAGTGTACAATTTCTCGTTCCATCATaGGGTCTAGTGCTTTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LCLLELKEYTQSSLLSVQFLVPS*GLVLLA Trigger: GGCTAAAAGCACTAGACCCCATGATGGAACGAGAAA...TTGTACACTAAGCAGGGAGCTCTGAGTGTACTCCTTCAACTCCAATAGACACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| 3UTR CAA 72 bp | AGGAGTACACTCAGAGCTCCCTGCTTAGTGTACAATTaGGTTGTGTGTTATAATCCGCAATGTGTCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: RSTLRAPCLVYN*VVCYNPQCVWT Trigger: TGTCCAGACACATTGCGGATTATAACACACAACCAAATTGTACACTAAGCAGGGAGCTCTGAGTGTACTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR TCA 90 bp | AAAAGTAGAATTCCTTCAATTCTTGTGGTTGCTTGGTTTCTGGTCATCCTGAGATGTGCCCACGCTTTCTaGACTCGTCTTCACCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: KSRIPSILVVAWFLVILRCAHAF*TRLHHS Trigger: ACTATGGTGAAGACGAGTTCAGAAAGCGTGGGCACA...TCTCAGGATGACCAGAAACCAAGCAACCACAAGAATTGAAGGAATTCTACTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR TCA 90 bp | ACACACACACAGTCAAAAAGGACATGTGTAGTGCAGGAAATGACTGGTCCCAGGTCTTTGTACTTGAGGTaGCGTTGCATTTCTTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: THTQSKRTCVVQEMTGPRSLYLR*RCISFH Trigger: ATGAAAAGAAATGCAACGTCACCTCAAGTACAAAGA...CCTGGGACCAGTCATTTCCTGCACTACACATGTCCTTTTTGACTGTGTGTGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
||
| CDS-3UTR GCA 90 bp | ACAGCCATGACTTTGTGTCTATTGGAGTTGAAGGAGTACACTCAGAGCTCCCTGAAAACTTCTTCAGGCTaGTTAGTCAAACTGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TAMTLCLLELKEYTQSSLKTSSG*LVKLSS Trigger: TGAAGACAGTTTGACTAAGCAGCCTGAAGAAGTTTT...CAGGGAGCTCTGAGTGTACTCCTTCAACTCCAATAGACACAAAGTCATGGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
||
| CDS-3UTR GCA 90 bp | GAGAAGTGCGCACGTTTGTTGTTCTCATCCTTTCAAAACGACATCAGAGTGGAGAGGTACTTGCTTAATTaGAACCACTTGACCAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: EKCARLLFSSFQNDIRVERYLLN*NHLTRF Trigger: GAATCTGGTCAAGTGGTTGCAATTAAGCAAGTACCT...CTCCACTCTGATGTCGTTTTGAAAGGATGAGAACAACAAACGTGCGCACTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
||
| CDS-3UTR CCA 90 bp | AAAGAACACACACACACAGTCAAAAAGGACATGTGTAGTGCAGGAAATGACTGGAGGTTTCCTGAATGTTaGTGGTGGGTTTGTAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KEHTHTVKKDMCSAGNDWRFPEC*WWVCRD Trigger: ATCCCTACAAACCCACCACCAACATTCAGGAAACCT...CCAGTCATTTCCTGCACTACACATGTCCTTTTTGACTGTGTGTGTGTGTTCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
||
| 3UTR CAA 72 bp | TTGAACATTACAGCCATGACTTTGTGTCTATTGGAGTaGAAGGAGTACACTCAGAGCTCCCTGCTTAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LNITAMTLCLLE*KEYTQSSLLSV Trigger: TACACTAAGCAGGGAGCTCTGAGTGTACTCCTTCAACTCCAATAGACACAAAGTCATGGCTGTAATGTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGAAGTGCGCACGTTTGTTGTTCTCATCCTTTCAAAACGACATCAGAGTATTTCCTGAAGATCTaGCTCAACAGGTACTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RERSAHVCCSHPFKTTSEYFLKI*LNRYLL Trigger: AAGCAAGTACCTGTTGAGTCAGATCTTCAGGAAATA...CTCTGATGTCGTTTTGAAAGGATGAGAACAACAAACGTGCGCACTTCTCTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
||
| CDS-3UTR TCA 90 bp | GGATTAAAAAGTAGAATTCCTTCAATTCTTGTGGTTGCTTGGTTTCTGGTCATCCATGCCGTTTGGCTTTaGTTTCCATGGCTTCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GLKSRIPSILVVAWFLVIHAVWL*FPWLLR Trigger: TCGCAGAAGCCATGGAAATCAAAGCCAAACGGCATG...GATGACCAGAAACCAAGCAACCACAAGAATTGAAGGAATTCTACTTTTTAATCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGAAGTGCGCACGTTTGTTGTTCTCATCCTTTCAAAACGACATCAGAGCATGACTCTTGTTCTTaGAGTCCTGCTTATCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RERSAHVCCSHPFKTTSEHDSCS*SPAYQS Trigger: ACTTTGATAAGCAGGACTTCAAGAACAAGAGTCATG...CTCTGATGTCGTTTTGAAAGGATGAGAACAACAAACGTGCGCACTTCTCTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGTGCGCACGTTTGTTGTTCTCATCCTTTCAAAACGACATCAGAGTGGAGATTCTTGATAAAAGGATaGTGTAACAGCTGTGTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RSAHVCCSHPFKTTSEWRFLIKG*CNSCVA Trigger: TGCGACACAGCTGTTACAGCATCCTTTTATCAAGAA...TCTCCACTCTGATGTCGTTTTGAAAGGATGAGAACAACAAACGTGCGCACTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGTAGAATTCCTTCAATTCTTGTGGTTGCTTGGTTTCTGGTCATCCTGAGATGTTCAATCATCGTCTaGGCTCCTTCACTCATCGTG | + |
|
Preference number: 4 (lower is better) Translates to: KSRIPSILVVAWFLVILRCSIIV*APSLIV Trigger: CACGATGAGTGAAGGAGCCCAGACGATGATTGAACA...TCTCAGGATGACCAGAAACCAAGCAACCACAAGAATTGAAGGAATTCTACTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR TCA 90 bp | AAAAGTAGAATTCCTTCAATTCTTGTGGTTGCTTGGTTTCTGGTCATCCTGAGATCAAAGTCTCCATCTTaGGGAACTCTCCAGTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KSRIPSILVVAWFLVILRSKSPS*GTLQLS Trigger: TGACAACTGGAGAGTTCCTCAAGATGGAGACTTTGA...TCTCAGGATGACCAGAAACCAAGCAACCACAAGAATTGAAGGAATTCTACTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAGAGAAGTGCGCACGTTTGTTGTTCTCATCCTTTCAAAACGACATCAGAGAAAACTTCTTCAGGCTaGTTAGTCAAACTGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RERSAHVCCSHPFKTTSEKTSSG*LVKLSS Trigger: TGAAGACAGTTTGACTAAGCAGCCTGAAGAAGTTTT...CTCTGATGTCGTTTTGAAAGGATGAGAACAACAAACGTGCGCACTTCTCTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
||
| CDS-3UTR GCA 90 bp | ATGGGGTTCCTATTACAGTGTTGCGTTTTGCCATTGTATCTGTTAACTGGCCAGAAAACTTCTTCAGGCTaGTTAGTCAAACTGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MGFLLQCCVLPLYLLTGQKTSSG*LVKLSS Trigger: TGAAGACAGTTTGACTAAGCAGCCTGAAGAAGTTTT...CTGGCCAGTTAACAGATACAATGGCAAAACGCAACACTGTAATAGGAACCCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000138841.2 |
||
| CDS-3UTR GCA 90 bp | ATGTGTAGTGCAGGAAATGACTGGTCCCAGGTCAATTACACAAATGCTAATGCTAGGTACTTGCTTAATTaGAACCACTTGACCAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: MCSAGNDWSQVNYTNANARYLLN*NHLTRF Trigger: GAATCTGGTCAAGTGGTTGCAATTAAGCAAGTACCT...AGCATTAGCATTTGTGTAATTGACCTGGGACCAGTCATTTCCTGCACTACACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
||
| CDS-3UTR GCA 90 bp | TTGTGTCTATTGGAGTTGAAGGAGTACACTCAGAGCTCCCTGCTTAGTGTACAATATCGACACGGGTTTTaGATTCTTGATAAAAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LCLLELKEYTQSSLLSVQYRHGF*ILDKRM Trigger: CATCCTTTTATCAAGAATGCAAAACCCGTGTCGATA...TTGTACACTAAGCAGGGAGCTCTGAGTGTACTCCTTCAACTCCAATAGACACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR GCA 90 bp | TTGTGTCTATTGGAGTTGAAGGAGTACACTCAGAGCTCCCTGCTTAGTGTACAAGATAGGTTGTCTTTTTaGACTGTATCTTTGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LCLLELKEYTQSSLLSVQDRLSF*TVSLMQ Trigger: CTGCATCAAAGATACAGTGCAAAAAGACAACCTATC...TTGTACACTAAGCAGGGAGCTCTGAGTGTACTCCTTCAACTCCAATAGACACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| CDS-3UTR CCA 90 bp | TTGTGTCTATTGGAGTTGAAGGAGTACACTCAGAGCTCCCTGCTTAGTGTACAAGTACTTCACAACATATaGACTGTCACATTGTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LCLLELKEYTQSSLLSVQVLHNI*TVTLLH Trigger: ATGCAACAATGTGACAGTCCATATGTTGTGAAGTAC...TTGTACACTAAGCAGGGAGCTCTGAGTGTACTCCTTCAACTCCAATAGACACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
||
| CDS-3UTR TCA 90 bp | GGATTAAAAAGTAGAATTCCTTCAATTCTTGTGGTTGCTTGGTTTCTGGTCATCCTTCACCATAGTGTGTaGATCCAGCTCATCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: GLKSRIPSILVVAWFLVILHHSV*IQLIFI Trigger: GATGAAGATGAGCTGGATTCACACACTATGGTGAAG...GATGACCAGAAACCAAGCAACCACAAGAATTGAAGGAATTCTACTTTTTAATCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR TCA 90 bp | AAAGAACACACACACACAGTCAAAAAGGACATGTGTAGTGCAGGAAATGACTGGTCTTTGTACTTGAGGTaGCGTTGCATTTCTTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KEHTHTVKKDMCSAGNDWSLYLR*RCISFH Trigger: ATGAAAAGAAATGCAACGTCACCTCAAGTACAAAGA...CCAGTCATTTCCTGCACTACACATGTCCTTTTTGACTGTGTGTGTGTGTTCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
||
| CDS-3UTR GCA 90 bp | AAAGAACACACACACACAGTCAAAAAGGACATGTGTAGTGCAGGAAATGACTGGTATCGACACGGGTTTTaGATTCTTGATAAAAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: KEHTHTVKKDMCSAGNDWYRHGF*ILDKRM Trigger: CATCCTTTTATCAAGAATGCAAAACCCGTGTCGATA...CCAGTCATTTCCTGCACTACACATGTCCTTTTTGACTGTGTGTGTGTGTTCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
||
| CDS-3UTR GCA 90 bp | ATGTGTAGTGCAGGAAATGACTGGTCCCAGGTCAATTACACAAATGCTAATGCTGATAGGTTGTCTTTTTaGACTGTATCTTTGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MCSAGNDWSQVNYTNANADRLSF*TVSLMQ Trigger: CTGCATCAAAGATACAGTGCAAAAAGACAACCTATC...AGCATTAGCATTTGTGTAATTGACCTGGGACCAGTCATTTCCTGCACTACACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
||
| CDS-3UTR GCA 90 bp | AAAGAACACACACACACAGTCAAAAAGGACATGTGTAGTGCAGGAAATGACTGGGATAGGTTGTCTTTTTaGACTGTATCTTTGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KEHTHTVKKDMCSAGNDWDRLSF*TVSLMQ Trigger: CTGCATCAAAGATACAGTGCAAAAAGACAACCTATC...CCAGTCATTTCCTGCACTACACATGTCCTTTTTGACTGTGTGTGTGTGTTCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGTAGAATTCCTTCAATTCTTGTGGTTGCTTGGTTTCTGGTCATCCTGAGAGGTCCGACTCTAACATaGTGCTGTTATGTTCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: KSRIPSILVVAWFLVILRGPTLT*CCYVQS Trigger: TGATTGAACATAACAGCACCATGTTAGAGTCGGACC...TCTCAGGATGACCAGAAACCAAGCAACCACAAGAATTGAAGGAATTCTACTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR GCA 90 bp | AAAAGTAGAATTCCTTCAATTCTTGTGGTTGCTTGGTTTCTGGTCATCCTGAGATTCTTGATAAAAGGATaGTGTAACAGCTGTGTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: KSRIPSILVVAWFLVILRFLIKG*CNSCVA Trigger: TGCGACACAGCTGTTACAGCATCCTTTTATCAAGAA...TCTCAGGATGACCAGAAACCAAGCAACCACAAGAATTGAAGGAATTCTACTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR CCA 90 bp | GGATTAAAAAGTAGAATTCCTTCAATTCTTGTGGTTGCTTGGTTTCTGGTCATCCCTGAATGTTGGTGGTaGGTTTGTAGGGATCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: GLKSRIPSILVVAWFLVIPECWW*VCRDHK Trigger: TTTATGATCCCTACAAACCCACCACCAACATTCAGG...GATGACCAGAAACCAAGCAACCACAAGAATTGAAGGAATTCTACTTTTTAATCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR CCA 90 bp | GGATTAAAAAGTAGAATTCCTTCAATTCTTGTGGTTGCTTGGTTTCTGGTCATCTTTCCTGAATGTTGGTaGTGGGTTTGTAGGGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: GLKSRIPSILVVAWFLVIFPECW*WVCRDH Trigger: ATGATCCCTACAAACCCACCACCAACATTCAGGAAA...GATGACCAGAAACCAAGCAACCACAAGAATTGAAGGAATTCTACTTTTTAATCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR TCA 90 bp | GGATTAAAAAGTAGAATTCCTTCAATTCTTGTGGTTGCTTGGTTTCTGGTCATCTATTTCCTGAAGATCTaGCTCAACAGGTACTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLKSRIPSILVVAWFLVIYFLKI*LNRYLL Trigger: AAGCAAGTACCTGTTGAGTCAGATCTTCAGGAAATA...GATGACCAGAAACCAAGCAACCACAAGAATTGAAGGAATTCTACTTTTTAATCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
||
| CDS-3UTR TCA 90 bp | AAAAGTAGAATTCCTTCAATTCTTGTGGTTGCTTGGTTTCTGGTCATCCTGAGATCTTTGTACTTGAGGTaGCGTTGCATTTCTTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KSRIPSILVVAWFLVILRSLYLR*RCISFH Trigger: ATGAAAAGAAATGCAACGTCACCTCAAGTACAAAGA...TCTCAGGATGACCAGAAACCAAGCAACCACAAGAATTGAAGGAATTCTACTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR TCA 90 bp | GGATTAAAAAGTAGAATTCCTTCAATTCTTGTGGTTGCTTGGTTTCTGGTCATCCATGACTCTTGTTCTTaGAGTCCTGCTTATCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLKSRIPSILVVAWFLVIHDSCS*SPAYQS Trigger: ACTTTGATAAGCAGGACTTCAAGAACAAGAGTCATG...GATGACCAGAAACCAAGCAACCACAAGAATTGAAGGAATTCTACTTTTTAATCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR GCA 90 bp | GGATTAAAAAGTAGAATTCCTTCAATTCTTGTGGTTGCTTGGTTTCTGGTCATCTTCTTGATAAAAGGATaGTGTAACAGCTGTGTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLKSRIPSILVVAWFLVIFLIKG*CNSCVA Trigger: TGCGACACAGCTGTTACAGCATCCTTTTATCAAGAA...GATGACCAGAAACCAAGCAACCACAAGAATTGAAGGAATTCTACTTTTTAATCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR GCA 90 bp | AAAAGTAGAATTCCTTCAATTCTTGTGGTTGCTTGGTTTCTGGTCATCCTGAGATATCGACACGGGTTTTaGATTCTTGATAAAAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: KSRIPSILVVAWFLVILRYRHGF*ILDKRM Trigger: CATCCTTTTATCAAGAATGCAAAACCCGTGTCGATA...TCTCAGGATGACCAGAAACCAAGCAACCACAAGAATTGAAGGAATTCTACTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS CCA 90 bp | CCCAGGTCCGACTCTAACATGGTGCTGTTATGTTCAATCATCGTCTaGGCTCCTTCACTCATCGTGCTGGTGGCCCGCATTGTGCCCACG | + |
|
Preference number: 5 (lower is better) Translates to: PRSDSNMVLLCSIIV*APSLIVLVARIVPT Trigger: CGTGGGCACAATGCGGGCCACCAGCACGATGAGTGAAGGAGCCCAGACGATGATTGAACATAACAGCACCATGTTAGAGTCGGACCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS GCA 90 bp | TGGTGCTGTTATGTTCAATCATCGTCTGGGCTCCTTCACTCATCGTaGTGGTGGCCCGCATTGTGCCCACGCTTTCTGAACTCGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: WCCYVQSSSGLLHSS*WWPALCPRFLNSSS Trigger: TGAAGACGAGTTCAGAAAGCGTGGGCACAATGCGGGCCACCAGCACGATGAGTGAAGGAGCCCAGACGATGATTGAACATAACAGCACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS CCA 90 bp | TGCTGTTATGTTCAATCATCGTCTGGGCTCCTTCACTCATCGTGCTaGTGGCCCGCATTGTGCCCACGCTTTCTGAACTCGTCTTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: CCYVQSSSGLLHSSC*WPALCPRFLNSSSP Trigger: TGGTGAAGACGAGTTCAGAAAGCGTGGGCACAATGCGGGCCACCAGCACGATGAGTGAAGGAGCCCAGACGATGATTGAACATAACAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS GCA 90 bp | AGCTCATCTTCATCCGAGTTTTCTTCCTCCTCCTCTAGCTCCCGCTaGTGCTCTTCATGCCGTTTGGCTTTGATTTCCATGGCTTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: SSSSSEFSSSSSSSR*CSSCRLALISMASA Trigger: CGCAGAAGCCATGGAAATCAAAGCCAAACGGCATGAAGAGCAGCAGCGGGAGCTAGAGGAGGAGGAAGAAAACTCGGATGAAGATGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR CAA 90 bp | GTAGTGCAGGAAATGACTGGTCCCAGGTCAATTACACAAATGCTAATGCTCTGCTGCTGGTGGCCCGCATaGTGCCCACGCTTTCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VVQEMTGPRSITQMLMLCCWWPA*CPRFLN Trigger: GTTCAGAAAGCGTGGGCACAATGCGGGCCACCAGCA...GCAGAGCATTAGCATTTGTGTAATTGACCTGGGACCAGTCATTTCCTGCACTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
||
| CDS GCA 90 bp | TCATCTTCATCCGAGTTTTCTTCCTCCTCCTCTAGCTCCCGCTGCTaGTCTTCATGCCGTTTGGCTTTGATTTCCATGGCTTCTGCGATC | + |
|
Preference number: 5 (lower is better) Translates to: SSSSEFSSSSSSSRC*SSCRLALISMASAI Trigger: GATCGCAGAAGCCATGGAAATCAAAGCCAAACGGCATGAAGAGCAGCAGCGGGAGCTAGAGGAGGAGGAAGAAAACTCGGATGAAGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR CAA 90 bp | AAAGAACACACACACACAGTCAAAAAGGACATGTGTAGTGCAGGAAATGACTGGTGCTGGTGGCCCGCATaGTGCCCACGCTTTCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: KEHTHTVKKDMCSAGNDWCWWPA*CPRFLN Trigger: GTTCAGAAAGCGTGGGCACAATGCGGGCCACCAGCA...CCAGTCATTTCCTGCACTACACATGTCCTTTTTGACTGTGTGTGTGTGTTCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
||
| CDS-3UTR CAA 90 bp | ACACACACACAGTCAAAAAGGACATGTGTAGTGCAGGAAATGACTGGTCCCAGGTCAGGAAAAACACTGTaGGACATAGGGCCTGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: THTQSKRTCVVQEMTGPRSGKTL*DIGPGS Trigger: TGAGCCAGGCCCTATGTCCAACAGTGTTTTTCCTGA...CCTGGGACCAGTCATTTCCTGCACTACACATGTCCTTTTTGACTGTGTGTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
||
| CDS-3UTR CAA 90 bp | ACAGCCATGACTTTGTGTCTATTGGAGTTGAAGGAGTACACTCAGAGCTCCCTGTCAGGAAAAACACTGTaGGACATAGGGCCTGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TAMTLCLLELKEYTQSSLSGKTL*DIGPGS Trigger: TGAGCCAGGCCCTATGTCCAACAGTGTTTTTCCTGA...CAGGGAGCTCTGAGTGTACTCCTTCAACTCCAATAGACACAAAGTCATGGCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR CAA 90 bp | ACAGCCATGACTTTGTGTCTATTGGAGTTGAAGGAGTACACTCAGAGCTCCCTGTGTTGCGTTTTGCCATaGTATCTGTTAACTGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TAMTLCLLELKEYTQSSLCCVLP*YLLTGQ Trigger: CTGGCCAGTTAACAGATACAATGGCAAAACGCAACA...CAGGGAGCTCTGAGTGTACTCCTTCAACTCCAATAGACACAAAGTCATGGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGTGCGCACGTTTGTTGTTCTCATCCTTTCAAAACGACATCAGAGTGGAGATCATGCCGTTTGGCTTaGATTTCCATGGCTTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: RSAHVCCSHPFKTTSEWRSCRLA*ISMASA Trigger: CGCAGAAGCCATGGAAATCAAAGCCAAACGGCATGA...TCTCCACTCTGATGTCGTTTTGAAAGGATGAGAACAACAAACGTGCGCACTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR CAA 90 bp | TTGTGTCTATTGGAGTTGAAGGAGTACACTCAGAGCTCCCTGCTTAGTGTACAATCATGCCGTTTGGCTTaGATTTCCATGGCTTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: LCLLELKEYTQSSLLSVQSCRLA*ISMASA Trigger: CGCAGAAGCCATGGAAATCAAAGCCAAACGGCATGA...TTGTACACTAAGCAGGGAGCTCTGAGTGTACTCCTTCAACTCCAATAGACACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR CAA 90 bp | GTAGTGCAGGAAATGACTGGTCCCAGGTCAATTACACAAATGCTAATGCTCTGCTGCTCTTCATGCCGTTaGGCTTTGATTTCCATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VVQEMTGPRSITQMLMLCCSSCR*ALISMA Trigger: AGCCATGGAAATCAAAGCCAAACGGCATGAAGAGCA...GCAGAGCATTAGCATTTGTGTAATTGACCTGGGACCAGTCATTTCCTGCACTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
||
| CDS-3UTR CAA 90 bp | GGATTAAAAAGTAGAATTCCTTCAATTCTTGTGGTTGCTTGGTTTCTGGTCATCTGCTGGTGGCCCGCATaGTGCCCACGCTTTCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GLKSRIPSILVVAWFLVICWWPA*CPRFLN Trigger: GTTCAGAAAGCGTGGGCACAATGCGGGCCACCAGCA...GATGACCAGAAACCAAGCAACCACAAGAATTGAAGGAATTCTACTTTTTAATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS CCA 90 bp | AGGAACTCTCCAGTTGTCAGGAAAAACACTGTTGGACATAGGGCCTaGCTCACGCATGCTCTGATCACAATTTTCATGACTCTTGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RNSPVVRKNTVGHRA*LTHALITIFMTLVL Trigger: AAGAACAAGAGTCATGAAAATTGTGATCAGAGCATGCGTGAGCCAGGCCCTATGTCCAACAGTGTTTTTCCTGACAACTGGAGAGTTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR CAA 90 bp | GTAGTGCAGGAAATGACTGGTCCCAGGTCAATTACACAAATGCTAATGCTCTGCATCAAAGTCTCCATCTaGAGGAACTCTCCAGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VVQEMTGPRSITQMLMLCIKVSI*RNSPVV Trigger: GACAACTGGAGAGTTCCTCAAGATGGAGACTTTGAT...GCAGAGCATTAGCATTTGTGTAATTGACCTGGGACCAGTCATTTCCTGCACTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
||
| CDS-3UTR CAA 90 bp | ACACACACACAGTCAAAAAGGACATGTGTAGTGCAGGAAATGACTGGTCCCAGGGTTCCTATTACAGTGTaGCGTTTTGCCATTGTATCT | + |
|
Preference number: 5 (lower is better) Translates to: THTQSKRTCVVQEMTGPRVPITV*RFAIVS Trigger: AGATACAATGGCAAAACGCAACACTGTAATAGGAAC...CCTGGGACCAGTCATTTCCTGCACTACACATGTCCTTTTTGACTGTGTGTGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
||
| CDS-3UTR CAA 90 bp | ACAGCCATGACTTTGTGTCTATTGGAGTTGAAGGAGTACACTCAGAGCTCCCTGACGGGTTTTGCATTCTaGATAAAAGGATGCTGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: TAMTLCLLELKEYTQSSLTGFAF*IKGCCN Trigger: GTTACAGCATCCTTTTATCAAGAATGCAAAACCCGT...CAGGGAGCTCTGAGTGTACTCCTTCAACTCCAATAGACACAAAGTCATGGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGTGCGCACGTTTGTTGTTCTCATCCTTTCAAAACGACATCAGAGTGGAGAATCAAAGTCTCCATCTaGAGGAACTCTCCAGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RSAHVCCSHPFKTTSEWRIKVSI*RNSPVV Trigger: GACAACTGGAGAGTTCCTCAAGATGGAGACTTTGAT...TCTCCACTCTGATGTCGTTTTGAAAGGATGAGAACAACAAACGTGCGCACTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR CAA 90 bp | AGAGAGAGAAGTGCGCACGTTTGTTGTTCTCATCCTTTCAAAACGACATCAGAGATCAAAGTCTCCATCTaGAGGAACTCTCCAGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RERSAHVCCSHPFKTTSEIKVSI*RNSPVV Trigger: GACAACTGGAGAGTTCCTCAAGATGGAGACTTTGAT...CTCTGATGTCGTTTTGAAAGGATGAGAACAACAAACGTGCGCACTTCTCTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR CAA 90 bp | AGAGAGAGAAGTGCGCACGTTTGTTGTTCTCATCCTTTCAAAACGACATCAGAGGGCATCCAGGATAGGTaGTCTTTTTGCACTGTATCT | + |
|
Preference number: 5 (lower is better) Translates to: RERSAHVCCSHPFKTTSEGIQDR*SFCTVS Trigger: AGATACAGTGCAAAAAGACAACCTATCCTGGATGCC...CTCTGATGTCGTTTTGAAAGGATGAGAACAACAAACGTGCGCACTTCTCTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGTGCGCACGTTTGTTGTTCTCATCCTTTCAAAACGACATCAGAGTGGAGAGGCATCCAGGATAGGTaGTCTTTTTGCACTGTATCT | + |
|
Preference number: 5 (lower is better) Translates to: RSAHVCCSHPFKTTSEWRGIQDR*SFCTVS Trigger: AGATACAGTGCAAAAAGACAACCTATCCTGGATGCC...TCTCCACTCTGATGTCGTTTTGAAAGGATGAGAACAACAAACGTGCGCACTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS CCA 90 bp | GGTGAAGTCATCAGACCAAAGTTCAGGTTTCCTGAATGTTGGTGGTaGGTTTGTAGGGATCATAAAAATAGCCCTCATCGGATGTATATC | + |
|
Preference number: 5 (lower is better) Translates to: GEVIRPKFRFPECWW*VCRDHKNSPHRMYI Trigger: GATATACATCCGATGAGGGCTATTTTTATGATCCCTACAAACCCACCACCAACATTCAGGAAACCTGAACTTTGGTCTGATGACTTCACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS CCA 90 bp | ATCGGTGAAGTCATCAGACCAAAGTTCAGGTTTCCTGAATGTTGGTaGTGGGTTTGTAGGGATCATAAAAATAGCCCTCATCGGATGTAT | + |
|
Preference number: 5 (lower is better) Translates to: IGEVIRPKFRFPECW*WVCRDHKNSPHRMY Trigger: ATACATCCGATGAGGGCTATTTTTATGATCCCTACAAACCCACCACCAACATTCAGGAAACCTGAACTTTGGTCTGATGACTTCACCGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR CAA 90 bp | ATGTGTAGTGCAGGAAATGACTGGTCCCAGGTCAATTACACAAATGCTAATGCTTGTTGCGTTTTGCCATaGTATCTGTTAACTGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: MCSAGNDWSQVNYTNANACCVLP*YLLTGQ Trigger: CTGGCCAGTTAACAGATACAATGGCAAAACGCAACA...AGCATTAGCATTTGTGTAATTGACCTGGGACCAGTCATTTCCTGCACTACACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
||
| CDS-3UTR CAA 90 bp | GAGAAGTGCGCACGTTTGTTGTTCTCATCCTTTCAAAACGACATCAGAGTGGAGACGGGTTTTGCATTCTaGATAAAAGGATGCTGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: EKCARLLFSSFQNDIRVETGFAF*IKGCCN Trigger: GTTACAGCATCCTTTTATCAAGAATGCAAAACCCGT...CTCCACTCTGATGTCGTTTTGAAAGGATGAGAACAACAAACGTGCGCACTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR CAA 90 bp | AAAAGTAGAATTCCTTCAATTCTTGTGGTTGCTTGGTTTCTGGTCATCCTGAGATCAGGAAAAACACTGTaGGACATAGGGCCTGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KSRIPSILVVAWFLVILRSGKTL*DIGPGS Trigger: TGAGCCAGGCCCTATGTCCAACAGTGTTTTTCCTGA...TCTCAGGATGACCAGAAACCAAGCAACCACAAGAATTGAAGGAATTCTACTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR CAA 90 bp | TTGTGTCTATTGGAGTTGAAGGAGTACACTCAGAGCTCCCTGCTTAGTGTACAAGTTCCTATTACAGTGTaGCGTTTTGCCATTGTATCT | + |
|
Preference number: 5 (lower is better) Translates to: LCLLELKEYTQSSLLSVQVPITV*RFAIVS Trigger: AGATACAATGGCAAAACGCAACACTGTAATAGGAAC...TTGTACACTAAGCAGGGAGCTCTGAGTGTACTCCTTCAACTCCAATAGACACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR CAA 90 bp | AGAGAGAGAAGTGCGCACGTTTGTTGTTCTCATCCTTTCAAAACGACATCAGAGGTTGTAACCTATTTCTaGAATTACCTCAGGAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RERSAHVCCSHPFKTTSEVVTYF*NYLRSH Trigger: ATGGCTCCTGAGGTAATTCAAGAAATAGGTTACAAC...CTCTGATGTCGTTTTGAAAGGATGAGAACAACAAACGTGCGCACTTCTCTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR CAA 90 bp | AAAAGTAGAATTCCTTCAATTCTTGTGGTTGCTTGGTTTCTGGTCATCCTGAGATGCTCTTCATGCCGTTaGGCTTTGATTTCCATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KSRIPSILVVAWFLVILRCSSCR*ALISMA Trigger: AGCCATGGAAATCAAAGCCAAACGGCATGAAGAGCA...TCTCAGGATGACCAGAAACCAAGCAACCACAAGAATTGAAGGAATTCTACTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR CAA 90 bp | AGAGAGAGAAGTGCGCACGTTTGTTGTTCTCATCCTTTCAAAACGACATCAGAGTTACAGTGTTGCGTTTaGCCATTGTATCTGTTAACT | + |
|
Preference number: 5 (lower is better) Translates to: RERSAHVCCSHPFKTTSELQCCV*PLYLLT Trigger: AGTTAACAGATACAATGGCAAAACGCAACACTGTAA...CTCTGATGTCGTTTTGAAAGGATGAGAACAACAAACGTGCGCACTTCTCTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR CAA 90 bp | ATGTGTAGTGCAGGAAATGACTGGTCCCAGGTCAATTACACAAATGCTAATGCTGTTCCTATTACAGTGTaGCGTTTTGCCATTGTATCT | + |
|
Preference number: 5 (lower is better) Translates to: MCSAGNDWSQVNYTNANAVPITV*RFAIVS Trigger: AGATACAATGGCAAAACGCAACACTGTAATAGGAAC...AGCATTAGCATTTGTGTAATTGACCTGGGACCAGTCATTTCCTGCACTACACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
||
| CDS-3UTR CAA 90 bp | AAAGAACACACACACACAGTCAAAAAGGACATGTGTAGTGCAGGAAATGACTGGACGGGTTTTGCATTCTaGATAAAAGGATGCTGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: KEHTHTVKKDMCSAGNDWTGFAF*IKGCCN Trigger: GTTACAGCATCCTTTTATCAAGAATGCAAAACCCGT...CCAGTCATTTCCTGCACTACACATGTCCTTTTTGACTGTGTGTGTGTGTTCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018476.14 ENSMUST00000226555.2 |
||
| CDS-3UTR CAA 90 bp | GGATTAAAAAGTAGAATTCCTTCAATTCTTGTGGTTGCTTGGTTTCTGGTCATCTGCTCTTCATGCCGTTaGGCTTTGATTTCCATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GLKSRIPSILVVAWFLVICSSCR*ALISMA Trigger: AGCCATGGAAATCAAAGCCAAACGGCATGAAGAGCA...GATGACCAGAAACCAAGCAACCACAAGAATTGAAGGAATTCTACTTTTTAATCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS CCA 90 bp | TTGCACTGTATCTTTGATGCAGTTCTTCTATTTCTCGTTCCATCATaGGGTCTAGTGCTTTTAGCCGCATCTGTAGTTCTTCTAAACTTA | + |
|
Preference number: 5 (lower is better) Translates to: LHCIFDAVLLFLVPS*GLVLLAASVVLLNL Trigger: TAAGTTTAGAAGAACTACAGATGCGGCTAAAAGCACTAGACCCCATGATGGAACGAGAAATAGAAGAACTGCATCAAAGATACAGTGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR CAA 90 bp | GGATTAAAAAGTAGAATTCCTTCAATTCTTGTGGTTGCTTGGTTTCTGGTCATCTGTTGCGTTTTGCCATaGTATCTGTTAACTGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GLKSRIPSILVVAWFLVICCVLP*YLLTGQ Trigger: CTGGCCAGTTAACAGATACAATGGCAAAACGCAACA...GATGACCAGAAACCAAGCAACCACAAGAATTGAAGGAATTCTACTTTTTAATCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR CAA 90 bp | AAAAGTAGAATTCCTTCAATTCTTGTGGTTGCTTGGTTTCTGGTCATCCTGAGAGTTGTAACCTATTTCTaGAATTACCTCAGGAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: KSRIPSILVVAWFLVILRVVTYF*NYLRSH Trigger: ATGGCTCCTGAGGTAATTCAAGAAATAGGTTACAAC...TCTCAGGATGACCAGAAACCAAGCAACCACAAGAATTGAAGGAATTCTACTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS-3UTR CAA 90 bp | GGATTAAAAAGTAGAATTCCTTCAATTCTTGTGGTTGCTTGGTTTCTGGTCATCTTACAGTGTTGCGTTTaGCCATTGTATCTGTTAACT | + |
|
Preference number: 5 (lower is better) Translates to: GLKSRIPSILVVAWFLVILQCCV*PLYLLT Trigger: AGTTAACAGATACAATGGCAAAACGCAACACTGTAA...GATGACCAGAAACCAAGCAACCACAAGAATTGAAGGAATTCTACTTTTTAATCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS CCA 72 bp | CAATCATCGTCTGGGCTCCTTCACTCATCGTGCTGGTaGCCCGCATTGTGCCCACGCTTTCTGAACTCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: QSSSGLLHSSCW*PALCPRFLNSS Trigger: AGACGAGTTCAGAAAGCGTGGGCACAATGCGGGCCACCAGCACGATGAGTGAAGGAGCCCAGACGATGATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS CCA 72 bp | GTTCAATCATCGTCTGGGCTCCTTCACTCATCGTGCTaGTGGCCCGCATTGTGCCCACGCTTTCTGAACTCG | + |
|
Preference number: 6 (lower is better) Translates to: VQSSSGLLHSSC*WPALCPRFLNS Trigger: CGAGTTCAGAAAGCGTGGGCACAATGCGGGCCACCAGCACGATGAGTGAAGGAGCCCAGACGATGATTGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
||
| CDS GCA 72 bp | TATGTTCAATCATCGTCTGGGCTCCTTCACTCATCGTaGTGGTGGCCCGCATTGTGCCCACGCTTTCTGAAC | + |
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Preference number: 6 (lower is better) Translates to: YVQSSSGLLHSS*WWPALCPRFLN Trigger: GTTCAGAAAGCGTGGGCACAATGCGGGCCACCAGCACGATGAGTGAAGGAGCCCAGACGATGATTGAACATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| CDS GCA 72 bp | TCATCCGAGTTTTCTTCCTCCTCCTCTAGCTCCCGCTaGTGCTCTTCATGCCGTTTGGCTTTGATTTCCATG | + |
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Preference number: 6 (lower is better) Translates to: SSEFSSSSSSSR*CSSCRLALISM Trigger: CATGGAAATCAAAGCCAAACGGCATGAAGAGCAGCAGCGGGAGCTAGAGGAGGAGGAAGAAAACTCGGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| CDS CCA 72 bp | GACTCTAACATGGTGCTGTTATGTTCAATCATCGTCTaGGCTCCTTCACTCATCGTGCTGGTGGCCCGCATT | + |
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Preference number: 6 (lower is better) Translates to: DSNMVLLCSIIV*APSLIVLVARI Trigger: AATGCGGGCCACCAGCACGATGAGTGAAGGAGCCCAGACGATGATTGAACATAACAGCACCATGTTAGAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| CDS CAA 72 bp | TCTAGCTCCCGCTGCTGCTCTTCATGCCGTTTGGCTTaGATTTCCATGGCTTCTGCGATCAGGTCTCTTAAT | + |
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Preference number: 6 (lower is better) Translates to: SSSRCCSSCRLA*ISMASAIRSLN Trigger: ATTAAGAGACCTGATCGCAGAAGCCATGGAAATCAAAGCCAAACGGCATGAAGAGCAGCAGCGGGAGCTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| CDS GCA 72 bp | AAAGGATGCTGTAACAGCTGTGTCGCAGTGGCTCTCTaGTCAGGACTCTTCACCAAGCACTTCTTCACAAAA | + |
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Preference number: 6 (lower is better) Translates to: KGCCNSCVAVAL*SGLFTKHFFTK Trigger: TTTTGTGAAGAAGTGCTTGGTGAAGAGTCCTGAGCAGAGAGCCACTGCGACACAGCTGTTACAGCATCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| CDS CAA 90 bp | GCTTCTGCGATCAGGTCTCTTAATATCGACACGGGTTTTGCATTCTaGATAAAAGGATGCTGTAACAGCTGTGTCGCAGTGGCTCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: ASAIRSLNIDTGFAF*IKGCCNSCVAVALC Trigger: GCAGAGAGCCACTGCGACACAGCTGTTACAGCATCCTTTTATCAAGAATGCAAAACCCGTGTCGATATTAAGAGACCTGATCGCAGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| CDS CCA 72 bp | CCAGTTGTCAGGAAAAACACTGTTGGACATAGGGCCTaGCTCACGCATGCTCTGATCACAATTTTCATGACT | + |
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Preference number: 6 (lower is better) Translates to: PVVRKNTVGHRA*LTHALITIFMT Trigger: AGTCATGAAAATTGTGATCAGAGCATGCGTGAGCCAGGCCCTATGTCCAACAGTGTTTTTCCTGACAACTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| CDS CAA 72 bp | CCTCCTCTTCTTCGCATCCATGGCATCCAGGATAGGTaGTCTTTTTGCACTGTATCTTTGATGCAGTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: PPLLRIHGIQDR*SFCTVSLMQFF Trigger: GAAGAACTGCATCAAAGATACAGTGCAAAAAGACAACCTATCCTGGATGCCATGGATGCGAAGAAGAGGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| CDS CCA 72 bp | ATCAGACCAAAGTTCAGGTTTCCTGAATGTTGGTGGTaGGTTTGTAGGGATCATAAAAATAGCCCTCATCGG | + |
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Preference number: 6 (lower is better) Translates to: IRPKFRFPECWW*VCRDHKNSPHR Trigger: CCGATGAGGGCTATTTTTATGATCCCTACAAACCCACCACCAACATTCAGGAAACCTGAACTTTGGTCTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| CDS CCA 72 bp | GTCATCAGACCAAAGTTCAGGTTTCCTGAATGTTGGTaGTGGGTTTGTAGGGATCATAAAAATAGCCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: VIRPKFRFPECW*WVCRDHKNSPH Trigger: ATGAGGGCTATTTTTATGATCCCTACAAACCCACCACCAACATTCAGGAAACCTGAACTTTGGTCTGATGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| CDS CAA 72 bp | GGCATCCAGGATAGGTTGTCTTTTTGCACTGTATCTTaGATGCAGTTCTTCTATTTCTCGTTCCATCATGGG | + |
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Preference number: 6 (lower is better) Translates to: GIQDRLSFCTVS*MQFFYFSFHHG Trigger: CCCATGATGGAACGAGAAATAGAAGAACTGCATCAAAGATACAGTGCAAAAAGACAACCTATCCTGGATGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| CDS TCA 72 bp | AAAGTAGTCCATGAAAGAAGGTCTTTGTACTTGAGGTaGCGTTGCATTTCTTTTCATAGTTCCGTCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: KVVHERRSLYLR*RCISFHSSVLL Trigger: GAGGAGGACGGAACTATGAAAAGAAATGCAACGTCACCTCAAGTACAAAGACCTTCTTTCATGGACTACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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| CDS CCA 72 bp | ATCTTTGATGCAGTTCTTCTATTTCTCGTTCCATCATaGGGTCTAGTGCTTTTAGCCGCATCTGTAGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: IFDAVLLFLVPS*GLVLLAASVVL Trigger: AAGAACTACAGATGCGGCTAAAAGCACTAGACCCCATGATGGAACGAGAAATAGAAGAACTGCATCAAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018476.14 ENSMUST00000067033.8 ENSMUST00000226555.2 |
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