Pregenerated sensors for STK26 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031112Ensembl transcript IDs: ENSMUST00000033444.11, ENSMUST00000114887.9
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCTTCAAACACAAGGTTCTCCAAGGTGCTAGACATGGGGCTGCCTaGATTCAGAACAACTTGCTAGGAAAGTCAATACTTTCTAGGTCT | + |
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Preference number: 1 (lower is better) Translates to: CFKHKVLQGARHGAA*IQNNLLGKSILSRS Trigger: AGACCTAGAAAGTATTGACTTTCCTAGCAAGTTGTTCTGAATTCAGGCAGCCCCATGTCTAGCACCTTGGAGAACCTTGTGTTTGAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| 3UTR-3UTR TCA 90 bp | AGGTACAGGATAGGCACCAATGAAAAGAATTTTCTTGGCATACAATGTTCTGCCAGACATGGGGCTGCCTaGATTCAGAACAACTTGCTA | + |
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Preference number: 2 (lower is better) Translates to: RYRIGTNEKNFLGIQCSARHGAA*IQNNLL Trigger: TAGCAAGTTGTTCTGAATTCAGGCAGCCCCATGTCT...GGCAGAACATTGTATGCCAAGAAAATTCTTTTCATTGGTGCCTATCCTGTACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| 3UTR CAA 90 bp | GAAAGAGAAGATAAATACACCAAGAGGTACTTCTGCTGTTACATGTaGCATGGAAGTGCTTCAAACACAAGGTTCTCCAAGGTGCTAGAC | + |
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Preference number: 2 (lower is better) Translates to: EREDKYTKRYFCCYM*HGSASNTRFSKVLD Trigger: GTCTAGCACCTTGGAGAACCTTGTGTTTGAAGCACTTCCATGCAACATGTAACAGCAGAAGTACCTCTTGGTGTATTTATCTTCTCTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| 3UTR-3UTR GCA 90 bp | AGGTACAGGATAGGCACCAATGAAAAGAATTTTCTTGGCATACAATGTTCTGCCTCTGCTGTTACATGTTaGATGGAAGTGCTTCAAACA | + |
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Preference number: 2 (lower is better) Translates to: RYRIGTNEKNFLGIQCSASAVTC*MEVLQT Trigger: TGTTTGAAGCACTTCCATGCAACATGTAACAGCAGA...GGCAGAACATTGTATGCCAAGAAAATTCTTTTCATTGGTGCCTATCCTGTACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| 3UTR-3UTR TCA 90 bp | AGGTACAGGATAGGCACCAATGAAAAGAATTTTCTTGGCATACAATGTTCTGCCATACCCCTTCAGAATTaGACACACTATACTTATGAG | + |
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Preference number: 2 (lower is better) Translates to: RYRIGTNEKNFLGIQCSAIPLQN*THYTYE Trigger: CTCATAAGTATAGTGTGTTCAATTCTGAAGGGGTAT...GGCAGAACATTGTATGCCAAGAAAATTCTTTTCATTGGTGCCTATCCTGTACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| 3UTR-3UTR GCA 90 bp | ATGCATTGCCACGACAAAATAAATGCTGGTTTAAAGTTACGCTCATACCTATTGCATGTTGCATGGAAGTaGTTCAAACACAAGGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: MHCHDKINAGLKLRSYLLHVAWK*FKHKVL Trigger: GAGAACCTTGTGTTTGAAGCACTTCCATGCAACATG...CAATAGGTATGAGCGTAACTTTAAACCAGCATTTATTTTGTCGTGGCAATGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| 3UTR-3UTR GCA 90 bp | AGGATAGGCACCAATGAAAAGAATTTTCTTGGCATACAATGTTCTGCCTTTCAACATGTTGCATGGAAGTaGTTCAAACACAAGGTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: RIGTNEKNFLGIQCSAFQHVAWK*FKHKVL Trigger: GAGAACCTTGTGTTTGAAGCACTTCCATGCAACATG...TTGAAAGGCAGAACATTGTATGCCAAGAAAATTCTTTTCATTGGTGCCTATCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| 3UTR-3UTR GCA 90 bp | TCAACTCAAAGCAACAGGTACAGGATAGGCACCAATGAAAAGAATTTTCTTGGCCCACGACAAAATAAATaGTGGTTTAAAGTTACGCTC | + |
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Preference number: 2 (lower is better) Translates to: STQSNRYRIGTNEKNFLGPRQNK*WFKVTL Trigger: GAGCGTAACTTTAAACCAGCATTTATTTTGTCGTGG...GCCAAGAAAATTCTTTTCATTGGTGCCTATCCTGTACCTGTTGCTTTGAGTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| 3UTR-3UTR TCA 90 bp | AGGATAGGCACCAATGAAAAGAATTTTCTTGGCATACAATGTTCTGCCTTTCAAATACCCCTTCAGAATTaGACACACTATACTTATGAG | + |
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Preference number: 2 (lower is better) Translates to: RIGTNEKNFLGIQCSAFQIPLQN*THYTYE Trigger: CTCATAAGTATAGTGTGTTCAATTCTGAAGGGGTAT...TTGAAAGGCAGAACATTGTATGCCAAGAAAATTCTTTTCATTGGTGCCTATCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| 3UTR-3UTR GCA 90 bp | AGGATAGGCACCAATGAAAAGAATTTTCTTGGCATACAATGTTCTGCCTTTCAACCACGACAAAATAAATaGTGGTTTAAAGTTACGCTC | + |
|
Preference number: 2 (lower is better) Translates to: RIGTNEKNFLGIQCSAFQPRQNK*WFKVTL Trigger: GAGCGTAACTTTAAACCAGCATTTATTTTGTCGTGG...TTGAAAGGCAGAACATTGTATGCCAAGAAAATTCTTTTCATTGGTGCCTATCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| 3UTR TCA 72 bp | CACAAGGTTCTCCAAGGTGCTAGACATGGGGCTGCCTaGATTCAGAACAACTTGCTAGGAAAGTCAATACTT | + |
|
Preference number: 3 (lower is better) Translates to: HKVLQGARHGAA*IQNNLLGKSIL Trigger: AAGTATTGACTTTCCTAGCAAGTTGTTCTGAATTCAGGCAGCCCCATGTCTAGCACCTTGGAGAACCTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| 3UTR GCA 72 bp | CAAGAGGTACTTCTGCTGTTACATGTTGCATGGAAGTaGTTCAAACACAAGGTTCTCCAAGGTGCTAGACAT | + |
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Preference number: 3 (lower is better) Translates to: QEVLLLLHVAWK*FKHKVLQGARH Trigger: ATGTCTAGCACCTTGGAGAACCTTGTGTTTGAAGCACTTCCATGCAACATGTAACAGCAGAAGTACCTCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| 3UTR CCA 72 bp | ATACACCAAGAGGTACTTCTGCTGTTACATGTTGCATaGAAGTGCTTCAAACACAAGGTTCTCCAAGGTGCT | + |
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Preference number: 3 (lower is better) Translates to: IHQEVLLLLHVA*KCFKHKVLQGA Trigger: AGCACCTTGGAGAACCTTGTGTTTGAAGCACTTCCATGCAACATGTAACAGCAGAAGTACCTCTTGGTGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| 3UTR GCA 72 bp | ATAAATACACCAAGAGGTACTTCTGCTGTTACATGTTaGATGGAAGTGCTTCAAACACAAGGTTCTCCAAGG | + |
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Preference number: 3 (lower is better) Translates to: INTPRGTSAVTC*MEVLQTQGSPR Trigger: CCTTGGAGAACCTTGTGTTTGAAGCACTTCCATGCAACATGTAACAGCAGAAGTACCTCTTGGTGTATTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| 3UTR GCA 72 bp | GCTATAATGAGTAAGCAATACCAGCTGTATTTGGGATaGAGGCGTGTGGTACAGTTTTCCATAATCAATTTA | + |
|
Preference number: 3 (lower is better) Translates to: AIMSKQYQLYLG*RRVVQFSIINL Trigger: TAAATTGATTATGGAAAACTGTACCACACGCCTGCATCCCAAATACAGCTGGTATTGCTTACTCATTATAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| 3UTR TCA 72 bp | ACTGCACAGTCTATCTTACTTTTATATGACAAGAAATaGTCCTGCTCTATGGTATCTTCCTATGAGTTGGAC | + |
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Preference number: 3 (lower is better) Translates to: TAQSILLLYDKK*SCSMVSSYELD Trigger: GTCCAACTCATAGGAAGATACCATAGAGCAGGATCATTTCTTGTCATATAAAAGTAAGATAGACTGTGCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR TCA 90 bp | ATGCATTGCCACGACAAAATAAATGCTGGTTTAAAGTTACGCTCATACCTATTGTGCATCCCAGGCACTTaGACAGCCACCGGTGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: MHCHDKINAGLKLRSYLLCIPGT*TATGEW Trigger: CCACTCACCGGTGGCTGTTCAAGTGCCTGGGATGCA...CAATAGGTATGAGCGTAACTTTAAACCAGCATTTATTTTGTCGTGGCAATGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR CCA 90 bp | CTGTTACATGTTGCATGGAAGTGCTTCAAACACAAGGTTCTCCAAGGTGCTAGAGATTCCTCATCACTGTaGCCTTCTGCCTTCCATCTC | + |
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Preference number: 4 (lower is better) Translates to: LLHVAWKCFKHKVLQGARDSSSL*PSAFHL Trigger: GAGATGGAAGGCAGAAGGCCACAGTGATGAGGAATC...TCTAGCACCTTGGAGAACCTTGTGTTTGAAGCACTTCCATGCAACATGTAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR TCA 90 bp | ATAGCTTCCTCTAAATCTTCAATGTGGCAAAGATCCAAAAGGCACATGGAGCTCAAACTCCATTCAGGGTaGGGGTTACTTTCCCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: IASSKSSMWQRSKRHMELKLHSG*GLLSLL Trigger: CAGCAGGGAAAGTAACCCTCACCCTGAATGGAGTTT...GAGCTCCATGTGCCTTTTGGATCTTTGCCACATTGAAGATTTAGAGGAAGCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR TCA 90 bp | ATAGCTTCCTCTAAATCTTCAATGTGGCAAAGATCCAAAAGGCACATGGAGCTCTCTTACGCACAGTGGTaGAACTCCATTCAGGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: IASSKSSMWQRSKRHMELSYAQW*NSIQGE Trigger: CTCACCCTGAATGGAGTTTCACCACTGTGCGTAAGA...GAGCTCCATGTGCCTTTTGGATCTTTGCCACATTGAAGATTTAGAGGAAGCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR TCA 90 bp | ATAGCTTCCTCTAAATCTTCAATGTGGCAAAGATCCAAAAGGCACATGGAGCTCTCACCATCTTATCTGTaGTGCCAGGACAGGCGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IASSKSSMWQRSKRHMELSPSYL*CQDRRF Trigger: AAACCGCCTGTCCTGGCATCACAGATAAGATGGTGA...GAGCTCCATGTGCCTTTTGGATCTTTGCCACATTGAAGATTTAGAGGAAGCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR GCA 90 bp | TCAACTCAAAGCAACAGGTACAGGATAGGCACCAATGAAAAGAATTTTCTTGGCGGTTACTTTCCCTGCTaGTGGATTCCGAGTCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: STQSNRYRIGTNEKNFLGGYFPC*WIPSQS Trigger: GCTCTGACTCGGAATCCAGCAGCAGGGAAAGTAACC...GCCAAGAAAATTCTTTTCATTGGTGCCTATCCTGTACCTGTTGCTTTGAGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR CCA 90 bp | CTGTTACATGTTGCATGGAAGTGCTTCAAACACAAGGTTCTCCAAGGTGCTAGAAGCATGGTGGCAATCTaGAACTCATCAAATGGACCA | + |
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Preference number: 4 (lower is better) Translates to: LLHVAWKCFKHKVLQGARSMVAI*NSSNGP Trigger: TGGTCCATTTGATGAGTTCCAGATTGCCACCATGCT...TCTAGCACCTTGGAGAACCTTGTGTTTGAAGCACTTCCATGCAACATGTAACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR TCA 90 bp | ATAGCTTCCTCTAAATCTTCAATGTGGCAAAGATCCAAAAGGCACATGGAGCTCCTTTCAAAATCTCCTTaGGCATGGTGGCAATCTGGA | + |
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Preference number: 4 (lower is better) Translates to: IASSKSSMWQRSKRHMELLSKSP*AWWQSG Trigger: TCCAGATTGCCACCATGCTCAAGGAGATTTTGAAAG...GAGCTCCATGTGCCTTTTGGATCTTTGCCACATTGAAGATTTAGAGGAAGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR CCA 90 bp | TCAACTCAAAGCAACAGGTACAGGATAGGCACCAATGAAAAGAATTTTCTTGGCCTGGAACTCATCAAATaGACCAGCACGCAGAAGATC | + |
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Preference number: 4 (lower is better) Translates to: STQSNRYRIGTNEKNFLGLELIK*TSTQKI Trigger: GATCTTCTGCGTGCTGGTCCATTTGATGAGTTCCAG...GCCAAGAAAATTCTTTTCATTGGTGCCTATCCTGTACCTGTTGCTTTGAGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR TCA 90 bp | ATAGCTTCCTCTAAATCTTCAATGTGGCAAAGATCCAAAAGGCACATGGAGCTCATTGCAACCACTTGCTaGGTACGGTTATCAATTCCT | + |
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Preference number: 4 (lower is better) Translates to: IASSKSSMWQRSKRHMELIATTC*VRLSIP Trigger: AGGAATTGATAACCGTACTCAGCAAGTGGTTGCAAT...GAGCTCCATGTGCCTTTTGGATCTTTGCCACATTGAAGATTTAGAGGAAGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR TCA 90 bp | ATGCATTGCCACGACAAAATAAATGCTGGTTTAAAGTTACGCTCATACCTATTGTCTTACGCACAGTGGTaGAACTCCATTCAGGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: MHCHDKINAGLKLRSYLLSYAQW*NSIQGE Trigger: CTCACCCTGAATGGAGTTTCACCACTGTGCGTAAGA...CAATAGGTATGAGCGTAACTTTAAACCAGCATTTATTTTGTCGTGGCAATGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR TCA 90 bp | AGGATAGGCACCAATGAAAAGAATTTTCTTGGCATACAATGTTCTGCCTTTCAATCACCATCTTATCTGTaGTGCCAGGACAGGCGGTTT | + |
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Preference number: 4 (lower is better) Translates to: RIGTNEKNFLGIQCSAFQSPSYL*CQDRRF Trigger: AAACCGCCTGTCCTGGCATCACAGATAAGATGGTGA...TTGAAAGGCAGAACATTGTATGCCAAGAAAATTCTTTTCATTGGTGCCTATCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR GCA 90 bp | AGGTACAGGATAGGCACCAATGAAAAGAATTTTCTTGGCATACAATGTTCTGCCATCACTGTGGCCTTCTaGCTTCCATCTCTTAAATCG | + |
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Preference number: 4 (lower is better) Translates to: RYRIGTNEKNFLGIQCSAITVAF*LPSLKS Trigger: CGATTTAAGAGATGGAAGGCAGAAGGCCACAGTGAT...GGCAGAACATTGTATGCCAAGAAAATTCTTTTCATTGGTGCCTATCCTGTACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR GCA 90 bp | ATGGTATCTTCCTATGAGTTGGACAATGTTCATTTAAATACCCCTTCAGAATTGGGTTACTTTCCCTGCTaGTGGATTCCGAGTCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: MVSSYELDNVHLNTPSELGYFPC*WIPSQS Trigger: GCTCTGACTCGGAATCCAGCAGCAGGGAAAGTAACC...CAATTCTGAAGGGGTATTTAAATGAACATTGTCCAACTCATAGGAAGATACCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR GCA 90 bp | ATAGCTTCCTCTAAATCTTCAATGTGGCAAAGATCCAAAAGGCACATGGAGCTCCTCAAGTTCTTCAATTaGCTGGTTTCGACTCGCATT | + |
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Preference number: 4 (lower is better) Translates to: IASSKSSMWQRSKRHMELLKFFN*LVSTRI Trigger: AATGCGAGTCGAAACCAGGCAATTGAAGAACTTGAG...GAGCTCCATGTGCCTTTTGGATCTTTGCCACATTGAAGATTTAGAGGAAGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| 3UTR CAA 72 bp | ACTAACGCTATAATGAGTAAGCAATACCAGCTGTATTaGGGATGCAGGCGTGTGGTACAGTTTTCCATAATC | + |
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Preference number: 4 (lower is better) Translates to: TNAIMSKQYQLY*GCRRVVQFSII Trigger: GATTATGGAAAACTGTACCACACGCCTGCATCCCAAATACAGCTGGTATTGCTTACTCATTATAGCGTTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR GCA 90 bp | AGGTACAGGATAGGCACCAATGAAAAGAATTTTCTTGGCATACAATGTTCTGCCAAACAGCTCAAGGTTTaGACAAGATCTTGCTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: RYRIGTNEKNFLGIQCSAKQLKV*TRSCSS Trigger: GGAAGAGCAAGATCTTGTGCAAACCTTGAGCTGTTT...GGCAGAACATTGTATGCCAAGAAAATTCTTTTCATTGGTGCCTATCCTGTACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033444.11 |
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| CDS-3UTR GCA 90 bp | TCAACTCAAAGCAACAGGTACAGGATAGGCACCAATGAAAAGAATTTTCTTGGCCTCAAGTTCTTCAATTaGCTGGTTTCGACTCGCATT | + |
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Preference number: 4 (lower is better) Translates to: STQSNRYRIGTNEKNFLGLKFFN*LVSTRI Trigger: AATGCGAGTCGAAACCAGGCAATTGAAGAACTTGAG...GCCAAGAAAATTCTTTTCATTGGTGCCTATCCTGTACCTGTTGCTTTGAGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR CCA 90 bp | ATGCATTGCCACGACAAAATAAATGCTGGTTTAAAGTTACGCTCATACCTATTGTGTGTATCTGTCAGCTaGCCAGCAACTCCAAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: MHCHDKINAGLKLRSYLLCVSVS*PATPKS Trigger: TGACTTTGGAGTTGCTGGCCAGCTGACAGATACACA...CAATAGGTATGAGCGTAACTTTAAACCAGCATTTATTTTGTCGTGGCAATGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR CCA 90 bp | AGGTACAGGATAGGCACCAATGAAAAGAATTTTCTTGGCATACAATGTTCTGCCATTCTGCAGTTTCTTTaGATCAGGCTTCTTACGCAC | + |
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Preference number: 4 (lower is better) Translates to: RYRIGTNEKNFLGIQCSAILQFL*IRLLTH Trigger: GTGCGTAAGAAGCCTGATCCAAAGAAACTGCAGAAT...GGCAGAACATTGTATGCCAAGAAAATTCTTTTCATTGGTGCCTATCCTGTACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR TCA 90 bp | TCAACTCAAAGCAACAGGTACAGGATAGGCACCAATGAAAAGAATTTTCTTGGCTATGAGCTGTCGCACTaGCTCAAAACAGTTATTTCT | + |
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Preference number: 4 (lower is better) Translates to: STQSNRYRIGTNEKNFLGYELSH*LKTVIS Trigger: AGAAATAACTGTTTTGAGTCAGTGCGACAGCTCATA...GCCAAGAAAATTCTTTTCATTGGTGCCTATCCTGTACCTGTTGCTTTGAGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR TCA 90 bp | ATGCATTGCCACGACAAAATAAATGCTGGTTTAAAGTTACGCTCATACCTATTGCTTTCAAAATCTCCTTaGGCATGGTGGCAATCTGGA | + |
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Preference number: 4 (lower is better) Translates to: MHCHDKINAGLKLRSYLLLSKSP*AWWQSG Trigger: TCCAGATTGCCACCATGCTCAAGGAGATTTTGAAAG...CAATAGGTATGAGCGTAACTTTAAACCAGCATTTATTTTGTCGTGGCAATGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR TCA 90 bp | ATAGCTTCCTCTAAATCTTCAATGTGGCAAAGATCCAAAAGGCACATGGAGCTCTTTAGAGTCATAAGCTaGCTGTTGAATAACTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: IASSKSSMWQRSKRHMELFRVIS*LLNNFR Trigger: CCTGAAGTTATTCAACAGTCAGCTTATGACTCTAAA...GAGCTCCATGTGCCTTTTGGATCTTTGCCACATTGAAGATTTAGAGGAAGCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR GCA 90 bp | AGGTACAGGATAGGCACCAATGAAAAGAATTTTCTTGGCATACAATGTTCTGCCCAGTTCTTCTGGATCTaGTATATTATTCTGCATCCC | + |
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Preference number: 4 (lower is better) Translates to: RYRIGTNEKNFLGIQCSAQFFWI*YIILHP Trigger: GGGATGCAGAATAATATAGCAGATCCAGAAGAACTG...GGCAGAACATTGTATGCCAAGAAAATTCTTTTCATTGGTGCCTATCCTGTACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR GCA 90 bp | ATGGTATCTTCCTATGAGTTGGACAATGTTCATTTAAATACCCCTTCAGAATTGTGCTCTTCCCCATTCTaGAGTTTCTTTGGATCAGGC | + |
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Preference number: 4 (lower is better) Translates to: MVSSYELDNVHLNTPSELCSSPF*SFFGSG Trigger: GCCTGATCCAAAGAAACTGCAGAATGGGGAAGAGCA...CAATTCTGAAGGGGTATTTAAATGAACATTGTCCAACTCATAGGAAGATACCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033444.11 |
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| CDS-3UTR GCA 90 bp | ATGGTATCTTCCTATGAGTTGGACAATGTTCATTTAAATACCCCTTCAGAATTGTCCTGTTCCCCATTCTaGAGTTTCTTTGGATCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: MVSSYELDNVHLNTPSELSCSPF*SFFGSG Trigger: GCCTGATCCAAAGAAACTGCAGAATGGGGAACAGGA...CAATTCTGAAGGGGTATTTAAATGAACATTGTCCAACTCATAGGAAGATACCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114887.9 |
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| CDS-3UTR CCA 90 bp | ATGGTATCTTCCTATGAGTTGGACAATGTTCATTTAAATACCCCTTCAGAATTGCTGGAACTCATCAAATaGACCAGCACGCAGAAGATC | + |
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Preference number: 4 (lower is better) Translates to: MVSSYELDNVHLNTPSELLELIK*TSTQKI Trigger: GATCTTCTGCGTGCTGGTCCATTTGATGAGTTCCAG...CAATTCTGAAGGGGTATTTAAATGAACATTGTCCAACTCATAGGAAGATACCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR CCA 90 bp | ATGGTATCTTCCTATGAGTTGGACAATGTTCATTTAAATACCCCTTCAGAATTGTGTGTATCTGTCAGCTaGCCAGCAACTCCAAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: MVSSYELDNVHLNTPSELCVSVS*PATPKS Trigger: TGACTTTGGAGTTGCTGGCCAGCTGACAGATACACA...CAATTCTGAAGGGGTATTTAAATGAACATTGTCCAACTCATAGGAAGATACCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR TCA 90 bp | AGGTACAGGATAGGCACCAATGAAAAGAATTTTCTTGGCATACAATGTTCTGCCTTTAGAGTCATAAGCTaGCTGTTGAATAACTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: RYRIGTNEKNFLGIQCSAFRVIS*LLNNFR Trigger: CCTGAAGTTATTCAACAGTCAGCTTATGACTCTAAA...GGCAGAACATTGTATGCCAAGAAAATTCTTTTCATTGGTGCCTATCCTGTACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR GCA 90 bp | ATGGTATCTTCCTATGAGTTGGACAATGTTCATTTAAATACCCCTTCAGAATTGATCACTGTGGCCTTCTaGCTTCCATCTCTTAAATCG | + |
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Preference number: 4 (lower is better) Translates to: MVSSYELDNVHLNTPSELITVAF*LPSLKS Trigger: CGATTTAAGAGATGGAAGGCAGAAGGCCACAGTGAT...CAATTCTGAAGGGGTATTTAAATGAACATTGTCCAACTCATAGGAAGATACCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR CCA 90 bp | ATAGCTTCCTCTAAATCTTCAATGTGGCAAAGATCCAAAAGGCACATGGAGCTCTGTGAACAGTTCTTCTaGATCTGCTATATTATTCTG | + |
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Preference number: 4 (lower is better) Translates to: IASSKSSMWQRSKRHMELCEQFF*ICYIIL Trigger: CAGAATAATATAGCAGATCCAGAAGAACTGTTCACA...GAGCTCCATGTGCCTTTTGGATCTTTGCCACATTGAAGATTTAGAGGAAGCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR CCA 90 bp | AGGATAGGCACCAATGAAAAGAATTTTCTTGGCATACAATGTTCTGCCTTTCAAATTCTGCAGTTTCTTTaGATCAGGCTTCTTACGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RIGTNEKNFLGIQCSAFQILQFL*IRLLTH Trigger: GTGCGTAAGAAGCCTGATCCAAAGAAACTGCAGAAT...TTGAAAGGCAGAACATTGTATGCCAAGAAAATTCTTTTCATTGGTGCCTATCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR TCA 90 bp | ATGGTATCTTCCTATGAGTTGGACAATGTTCATTTAAATACCCCTTCAGAATTGATTGCAACCACTTGCTaGGTACGGTTATCAATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MVSSYELDNVHLNTPSELIATTC*VRLSIP Trigger: AGGAATTGATAACCGTACTCAGCAAGTGGTTGCAAT...CAATTCTGAAGGGGTATTTAAATGAACATTGTCCAACTCATAGGAAGATACCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR CCA 90 bp | TCAACTCAAAGCAACAGGTACAGGATAGGCACCAATGAAAAGAATTTTCTTGGCTGTGAACAGTTCTTCTaGATCTGCTATATTATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: STQSNRYRIGTNEKNFLGCEQFF*ICYIIL Trigger: CAGAATAATATAGCAGATCCAGAAGAACTGTTCACA...GCCAAGAAAATTCTTTTCATTGGTGCCTATCCTGTACCTGTTGCTTTGAGTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR TCA 90 bp | ATGGTATCTTCCTATGAGTTGGACAATGTTCATTTAAATACCCCTTCAGAATTGTATGAGCTGTCGCACTaGCTCAAAACAGTTATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MVSSYELDNVHLNTPSELYELSH*LKTVIS Trigger: AGAAATAACTGTTTTGAGTCAGTGCGACAGCTCATA...CAATTCTGAAGGGGTATTTAAATGAACATTGTCCAACTCATAGGAAGATACCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR GCA 90 bp | ATGGTATCTTCCTATGAGTTGGACAATGTTCATTTAAATACCCCTTCAGAATTGTTTAAGTTCGGCAAATaGAGGTGTGATTATCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: MVSSYELDNVHLNTPSELFKFGK*RCDYHR Trigger: TCTATGATAATCACACCTGCATTTGCCGAACTTAAA...CAATTCTGAAGGGGTATTTAAATGAACATTGTCCAACTCATAGGAAGATACCAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033444.11 |
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| CDS TCA 90 bp | CCCCATTCTGCAGTTTCTTTGGATCAGGCTTCTTACGCACAGTGGTaGAACTCCATTCAGGGTGAGGGTTACTTTCCCTGCTGCTGGATT | + |
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Preference number: 5 (lower is better) Translates to: PHSAVSLDQASYAQW*NSIQGEGYFPCCWI Trigger: AATCCAGCAGCAGGGAAAGTAACCCTCACCCTGAATGGAGTTTCACCACTGTGCGTAAGAAGCCTGATCCAAAGAAACTGCAGAATGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS CCA 90 bp | CTGGATTCCGAGTCAGAGCCCTCGGAATCAGATTCCTCATCACTGTaGCCTTCTGCCTTCCATCTCTTAAATCGATCGATCAATTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LDSESEPSESDSSSL*PSAFHLLNRSINSV Trigger: GACTGAATTGATCGATCGATTTAAGAGATGGAAGGCAGAAGGCCACAGTGATGAGGAATCTGATTCCGAGGGCTCTGACTCGGAATCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS CCA 90 bp | TCGACTCGCATTATTCTCGTCCTGTTCCCCATTCTGCAGTTTCTTTaGATCAGGCTTCTTACGCACAGTGGTGAAACTCCATTCAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: STRIILVLFPILQFL*IRLLTHSGETPFRV Trigger: CACCCTGAATGGAGTTTCACCACTGTGCGTAAGAAGCCTGATCCAAAGAAACTGCAGAATGGGGAACAGGACGAGAATAATGCGAGTCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114887.9 |
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| CDS GCA 90 bp | ATTGCCTGGTTTCGACTCGCATTATTCTCGTCCTGTTCCCCATTCTaGAGTTTCTTTGGATCAGGCTTCTTACGCACAGTGGTGAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: IAWFRLALFSSCSPF*SFFGSGFLRTVVKL Trigger: GAGTTTCACCACTGTGCGTAAGAAGCCTGATCCAAAGAAACTGCAGAATGGGGAACAGGACGAGAATAATGCGAGTCGAAACCAGGCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114887.9 |
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| CDS CCA 90 bp | CAAGGTTTGCACAAGATCTTGCTCTTCCCCATTCTGCAGTTTCTTTaGATCAGGCTTCTTACGCACAGTGGTGAAACTCCATTCAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QGLHKILLFPILQFL*IRLLTHSGETPFRV Trigger: CACCCTGAATGGAGTTTCACCACTGTGCGTAAGAAGCCTGATCCAAAGAAACTGCAGAATGGGGAAGAGCAAGATCTTGTGCAAACCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033444.11 |
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| CDS-3UTR CAA 90 bp | CTGTTACATGTTGCATGGAAGTGCTTCAAACACAAGGTTCTCCAAGGTGCTAGACATTCTGCAGTTTCTTaGGATCAGGCTTCTTACGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLHVAWKCFKHKVLQGARHSAVS*DQASYA Trigger: TGCGTAAGAAGCCTGATCCAAAGAAACTGCAGAATG...TCTAGCACCTTGGAGAACCTTGTGTTTGAAGCACTTCCATGCAACATGTAACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR CAA 90 bp | ATAGCTTCCTCTAAATCTTCAATGTGGCAAAGATCCAAAAGGCACATGGAGCTCCAAACAGCTCAAGGTTaGCACAAGATCTTGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IASSKSSMWQRSKRHMELQTAQG*HKILLF Trigger: GAAGAGCAAGATCTTGTGCAAACCTTGAGCTGTTTG...GAGCTCCATGTGCCTTTTGGATCTTTGCCACATTGAAGATTTAGAGGAAGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033444.11 |
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| CDS-3UTR CAA 90 bp | AGGATAGGCACCAATGAAAAGAATTTTCTTGGCATACAATGTTCTGCCTTTCAATTCGGAGGCTCTCCCTaGGCAAGTTCAATAGCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: RIGTNEKNFLGIQCSAFQFGGSP*ASSIAV Trigger: TACTGCTATTGAACTTGCCAAGGGAGAGCCTCCGAA...TTGAAAGGCAGAACATTGTATGCCAAGAAAATTCTTTTCATTGGTGCCTATCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR CAA 90 bp | ATGCATTGCCACGACAAAATAAATGCTGGTTTAAAGTTACGCTCATACCTATTGCATTCTGCAGTTTCTTaGGATCAGGCTTCTTACGCA | + |
|
Preference number: 5 (lower is better) Translates to: MHCHDKINAGLKLRSYLLHSAVS*DQASYA Trigger: TGCGTAAGAAGCCTGATCCAAAGAAACTGCAGAATG...CAATAGGTATGAGCGTAACTTTAAACCAGCATTTATTTTGTCGTGGCAATGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR CAA 90 bp | AGGTACAGGATAGGCACCAATGAAAAGAATTTTCTTGGCATACAATGTTCTGCCTTTAATTGCAACCACTaGCTGAGTACGGTTATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: RYRIGTNEKNFLGIQCSAFNCNH*LSTVIN Trigger: ATTGATAACCGTACTCAGCAAGTGGTTGCAATTAAA...GGCAGAACATTGTATGCCAAGAAAATTCTTTTCATTGGTGCCTATCCTGTACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR CAA 90 bp | AGGATAGGCACCAATGAAAAGAATTTTCTTGGCATACAATGTTCTGCCTTTCAAAGGACCCATAGTATTTaGTTACATATGAGCTGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: RIGTNEKNFLGIQCSAFQRTHSI*LHMSCR Trigger: GCGACAGCTCATATGTAACAAAATACTATGGGTCCT...TTGAAAGGCAGAACATTGTATGCCAAGAAAATTCTTTTCATTGGTGCCTATCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR CAA 90 bp | ATGCATTGCCACGACAAAATAAATGCTGGTTTAAAGTTACGCTCATACCTATTGAGGACCCATAGTATTTaGTTACATATGAGCTGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: MHCHDKINAGLKLRSYLLRTHSI*LHMSCR Trigger: GCGACAGCTCATATGTAACAAAATACTATGGGTCCT...CAATAGGTATGAGCGTAACTTTAAACCAGCATTTATTTTGTCGTGGCAATGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS-3UTR CAA 90 bp | ATGCATTGCCACGACAAAATAAATGCTGGTTTAAAGTTACGCTCATACCTATTGTTTAATTGCAACCACTaGCTGAGTACGGTTATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: MHCHDKINAGLKLRSYLLFNCNH*LSTVIN Trigger: ATTGATAACCGTACTCAGCAAGTGGTTGCAATTAAA...CAATAGGTATGAGCGTAACTTTAAACCAGCATTTATTTTGTCGTGGCAATGCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS TCA 72 bp | GCAGTTTCTTTGGATCAGGCTTCTTACGCACAGTGGTaGAACTCCATTCAGGGTGAGGGTTACTTTCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: AVSLDQASYAQW*NSIQGEGYFPC Trigger: GCAGGGAAAGTAACCCTCACCCTGAATGGAGTTTCACCACTGTGCGTAAGAAGCCTGATCCAAAGAAACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS CCA 72 bp | GAGTCAGAGCCCTCGGAATCAGATTCCTCATCACTGTaGCCTTCTGCCTTCCATCTCTTAAATCGATCGATC | + |
|
Preference number: 6 (lower is better) Translates to: ESEPSESDSSSL*PSAFHLLNRSI Trigger: GATCGATCGATTTAAGAGATGGAAGGCAGAAGGCCACAGTGATGAGGAATCTGATTCCGAGGGCTCTGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS GCA 72 bp | TTTCGACTCGCATTATTCTCGTCCTGTTCCCCATTCTaGAGTTTCTTTGGATCAGGCTTCTTACGCACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: FRLALFSSCSPF*SFFGSGFLRTV Trigger: CACTGTGCGTAAGAAGCCTGATCCAAAGAAACTGCAGAATGGGGAACAGGACGAGAATAATGCGAGTCGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114887.9 |
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| CDS CCA 72 bp | AGACCTTTCAAAATCTCCTTGAGCATGGTGGCAATCTaGAACTCATCAAATGGACCAGCACGCAGAAGATCC | + |
|
Preference number: 6 (lower is better) Translates to: RPFKISLSMVAI*NSSNGPARRRS Trigger: GGATCTTCTGCGTGCTGGTCCATTTGATGAGTTCCAGATTGCCACCATGCTCAAGGAGATTTTGAAAGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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| CDS CCA 72 bp | CACAAGATCTTGCTCTTCCCCATTCTGCAGTTTCTTTaGATCAGGCTTCTTACGCACAGTGGTGAAACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: HKILLFPILQFL*IRLLTHSGETP Trigger: TGGAGTTTCACCACTGTGCGTAAGAAGCCTGATCCAAAGAAACTGCAGAATGGGGAAGAGCAAGATCTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033444.11 |
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| CDS CCA 72 bp | ATTATTCTCGTCCTGTTCCCCATTCTGCAGTTTCTTTaGATCAGGCTTCTTACGCACAGTGGTGAAACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: IILVLFPILQFL*IRLLTHSGETP Trigger: TGGAGTTTCACCACTGTGCGTAAGAAGCCTGATCCAAAGAAACTGCAGAATGGGGAACAGGACGAGAATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114887.9 |
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| CDS GCA 72 bp | GCAGGTGTGATTATCATAGACAAACAGCTCAAGGTTTaGACAAGATCTTGCTCTTCCCCATTCTGCAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: AGVIIIDKQLKV*TRSCSSPFCSF Trigger: GAAACTGCAGAATGGGGAAGAGCAAGATCTTGTGCAAACCTTGAGCTGTTTGTCTATGATAATCACACCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033444.11 |
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| CDS GCA 72 bp | TCAATTGCCTGGTTTCGACTCGCATTATTCTCGTCCTaGTGTTTAAGTTCGGCAAATGCAGGTGTGATTATC | + |
|
Preference number: 6 (lower is better) Translates to: SIAWFRLALFSS*CLSSANAGVII Trigger: GATAATCACACCTGCATTTGCCGAACTTAAACAGCAGGACGAGAATAATGCGAGTCGAAACCAGGCAATTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033444.11 |
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| CDS CAA 90 bp | TTCGGCAAATGCAGGTGTGATTATCATAGACAAACAGCTCAAGGTTaGCACAAGATCTTGCTCTTCCCCATTCTGCAGTTTCTTTGGATC | + |
|
Preference number: 6 (lower is better) Translates to: FGKCRCDYHRQTAQG*HKILLFPILQFLWI Trigger: GATCCAAAGAAACTGCAGAATGGGGAAGAGCAAGATCTTGTGCAAACCTTGAGCTGTTTGTCTATGATAATCACACCTGCATTTGCCGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033444.11 |
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| CDS CAA 72 bp | TGCAGGTGTGATTATCATAGACAAACAGCTCAAGGTTaGCACAAGATCTTGCTCTTCCCCATTCTGCAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: CRCDYHRQTAQG*HKILLFPILQF Trigger: AAACTGCAGAATGGGGAAGAGCAAGATCTTGTGCAAACCTTGAGCTGTTTGTCTATGATAATCACACCTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033444.11 |
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| CDS CAA 90 bp | GGACGAAATGACGGGTCTTTATTCAGGCAAGCATCAATAAACTCCTaGAAAGACTTAGTAAAGTCTCCAATAAGAGTTGGAGGGTTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: GRNDGSLFRQASINS*KDLVKSPIRVGGLF Trigger: AAACAACCCTCCAACTCTTATTGGAGACTTTACTAAGTCTTTCAAGGAGTTTATTGATGCTTGCCTGAATAAAGACCCGTCATTTCGTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033444.11 ENSMUST00000114887.9 |
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